locus-tag class description APS56_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS00025 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS00025 PF12833 Helix-turn-helix domain APS56_RS00025 PF07494 Two component regulator propeller APS56_RS00025 PF00072 Response regulator receiver domain APS56_RS00025 PF07495 Y_Y_Y domain APS56_RS00040 PF13580 SIS domain APS56_RS00050 PF12704 MacB-like periplasmic core domain APS56_RS00050 PF02687 FtsX-like permease family APS56_RS00050 PF00005 ABC transporter APS56_RS00070 PF03971 Monomeric isocitrate dehydrogenase APS56_RS00075 PF01245 Ribosomal protein L19 APS56_RS00085 PF05547 Immune inhibitor A peptidase M6 APS56_RS00085 PF00801 PKD domain APS56_RS00105 PF01645 Conserved region in glutamate synthase APS56_RS00115 PF00580 UvrD/REP helicase N-terminal domain APS56_RS00115 PF13361 UvrD-like helicase C-terminal domain APS56_RS00135 PF01300 Telomere recombination APS56_RS00165 PF03606 C4-dicarboxylate anaerobic carrier APS56_RS00170 PF03167 Uracil DNA glycosylase superfamily APS56_RS00175 PF00378 Enoyl-CoA hydratase/isomerase APS56_RS00180 PF01040 UbiA prenyltransferase family APS56_RS00190 PF13378 Enolase C-terminal domain-like APS56_RS00190 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS56_RS00195 PF02517 CPBP intramembrane metalloprotease APS56_RS00200 PF00501 AMP-binding enzyme APS56_RS00200 PF13193 AMP-binding enzyme C-terminal domain APS56_RS00205 PF01343 Peptidase family S49 APS56_RS00210 PF00145 C-5 cytosine-specific DNA methylase APS56_RS00215 PF04011 LemA family APS56_RS00225 PF07690 Major Facilitator Superfamily APS56_RS00240 PF15887 Putative zinc-binding metallo-peptidase APS56_RS00240 PF10005 zinc-ribbon domain APS56_RS00245 PF00271 Helicase conserved C-terminal domain APS56_RS00245 PF00270 DEAD/DEAH box helicase APS56_RS00250 PF13367 PrsW family intramembrane metalloprotease APS56_RS00255 PF00293 NUDIX domain APS56_RS00260 PF05343 M42 glutamyl aminopeptidase APS56_RS00270 PF03006 Haemolysin-III related APS56_RS00290 PF13649 Methyltransferase domain APS56_RS00295 PF02926 THUMP domain APS56_RS00295 PF01170 Putative RNA methylase family UPF0020 APS56_RS00320 PF01938 TRAM domain APS56_RS00320 PF05958 tRNA (Uracil-5-)-methyltransferase APS56_RS00325 PF00202 Aminotransferase class-III APS56_RS00335 PF05532 CsbD-like APS56_RS00360 PF00072 Response regulator receiver domain APS56_RS00365 PF00360 Phytochrome region APS56_RS00365 PF08446 PAS fold APS56_RS00365 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS00365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS00365 PF01590 GAF domain APS56_RS00380 PF00072 Response regulator receiver domain APS56_RS00385 PF02566 OsmC-like protein APS56_RS00395 PF12833 Helix-turn-helix domain APS56_RS00395 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS00395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS00395 PF07495 Y_Y_Y domain APS56_RS00395 PF00072 Response regulator receiver domain APS56_RS00395 PF07494 Two component regulator propeller APS56_RS00400 PF01266 FAD dependent oxidoreductase APS56_RS00415 PF13091 PLD-like domain APS56_RS00415 PF13396 Phospholipase_D-nuclease N-terminal APS56_RS00430 PF04389 Peptidase family M28 APS56_RS00430 PF02225 PA domain APS56_RS00450 PF00582 Universal stress protein family APS56_RS00460 PF02767 DNA polymerase III beta subunit, central domain APS56_RS00460 PF00712 DNA polymerase III beta subunit, N-terminal domain APS56_RS00460 PF02768 DNA polymerase III beta subunit, C-terminal domain APS56_RS00480 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase APS56_RS00485 PF02562 PhoH-like protein APS56_RS00500 PF01259 SAICAR synthetase APS56_RS00520 PF02614 Glucuronate isomerase APS56_RS00525 PF01081 KDPG and KHG aldolase APS56_RS00535 PF00356 Bacterial regulatory proteins, lacI family APS56_RS00540 PF00356 Bacterial regulatory proteins, lacI family APS56_RS00545 PF04962 KduI/IolB family APS56_RS00555 PF16153 Domain of unknown function (DUF4861) APS56_RS00560 PF01238 Phosphomannose isomerase type I APS56_RS00565 PF02779 Transketolase, pyrimidine binding domain APS56_RS00565 PF02780 Transketolase, C-terminal domain APS56_RS00565 PF00456 Transketolase, thiamine diphosphate binding domain APS56_RS00570 PF00923 Transaldolase/Fructose-6-phosphate aldolase APS56_RS00580 PF00245 Alkaline phosphatase APS56_RS00585 PF00593 TonB dependent receptor APS56_RS00585 PF07715 TonB-dependent Receptor Plug Domain APS56_RS00595 PF00202 Aminotransferase class-III APS56_RS00610 PF00582 Universal stress protein family APS56_RS00615 PF07494 Two component regulator propeller APS56_RS00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS00615 PF00072 Response regulator receiver domain APS56_RS00615 PF07495 Y_Y_Y domain APS56_RS00615 PF12833 Helix-turn-helix domain APS56_RS00615 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS00620 PF13426 PAS domain APS56_RS00620 PF01740 STAS domain APS56_RS00625 PF12805 FUSC-like inner membrane protein yccS APS56_RS00635 PF00596 Class II Aldolase and Adducin N-terminal domain APS56_RS00640 PF01261 Xylose isomerase-like TIM barrel APS56_RS00645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS56_RS00645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS56_RS00650 PF00596 Class II Aldolase and Adducin N-terminal domain APS56_RS00665 PF06826 Predicted Permease Membrane Region APS56_RS00665 PF02080 TrkA-C domain APS56_RS00670 PF07715 TonB-dependent Receptor Plug Domain APS56_RS00670 PF00593 TonB dependent receptor APS56_RS00690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS56_RS00690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS56_RS00695 PF00266 Aminotransferase class-V APS56_RS00705 PF00037 4Fe-4S binding domain APS56_RS00715 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS56_RS00715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS00725 PF01926 50S ribosome-binding GTPase APS56_RS00725 PF06071 Protein of unknown function (DUF933) APS56_RS00740 PF00986 DNA gyrase B subunit, carboxyl terminus APS56_RS00740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS00740 PF01751 Toprim domain APS56_RS00740 PF00204 DNA gyrase B APS56_RS00750 PF00521 DNA gyrase/topoisomerase IV, subunit A APS56_RS00755 PF02374 Anion-transporting ATPase APS56_RS00765 PF00520 Ion transport protein APS56_RS00765 PF00027 Cyclic nucleotide-binding domain APS56_RS00780 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS56_RS00780 PF11490 DNA polymerase III polC-type N-terminus II APS56_RS00780 PF02811 PHP domain APS56_RS00780 PF00929 Exonuclease APS56_RS00780 PF14579 Helix-hairpin-helix motif APS56_RS00780 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS56_RS00780 PF01336 OB-fold nucleic acid binding domain APS56_RS00785 PF01168 Alanine racemase, N-terminal domain APS56_RS00790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS56_RS00790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS56_RS00795 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS00795 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS56_RS00810 PF01668 SmpB protein APS56_RS00815 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS56_RS00815 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS00840 PF00270 DEAD/DEAH box helicase APS56_RS00840 PF00271 Helicase conserved C-terminal domain APS56_RS00850 PF04715 Anthranilate synthase component I, N terminal region APS56_RS00850 PF00117 Glutamine amidotransferase class-I APS56_RS00850 PF00425 chorismate binding enzyme APS56_RS00860 PF01171 PP-loop family APS56_RS00860 PF11734 TilS substrate C-terminal domain APS56_RS00865 PF13382 Adenine deaminase C-terminal domain APS56_RS00865 PF01979 Amidohydrolase family APS56_RS00875 PF00111 2Fe-2S iron-sulfur cluster binding domain APS56_RS00875 PF01799 [2Fe-2S] binding domain APS56_RS00880 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase APS56_RS00885 PF13478 XdhC Rossmann domain APS56_RS00885 PF02625 XdhC and CoxI family APS56_RS00895 PF01568 Molydopterin dinucleotide binding domain APS56_RS00895 PF00384 Molybdopterin oxidoreductase APS56_RS00900 PF04324 BFD-like [2Fe-2S] binding domain APS56_RS00900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS56_RS00900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS56_RS00900 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS00900 PF18267 Rubredoxin NAD+ reductase C-terminal domain APS56_RS00915 PF07730 Histidine kinase APS56_RS00915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS00920 PF00196 Bacterial regulatory proteins, luxR family APS56_RS00920 PF00072 Response regulator receiver domain APS56_RS00925 PF07690 Major Facilitator Superfamily APS56_RS00930 PF01568 Molydopterin dinucleotide binding domain APS56_RS00930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain APS56_RS00930 PF00384 Molybdopterin oxidoreductase APS56_RS00935 PF00301 Rubredoxin APS56_RS00945 PF04545 Sigma-70, region 4 APS56_RS00945 PF04542 Sigma-70 region 2 APS56_RS00945 PF00140 Sigma-70 factor, region 1.2 APS56_RS00945 PF04539 Sigma-70 region 3 APS56_RS00960 PF00593 TonB dependent receptor APS56_RS00960 PF07715 TonB-dependent Receptor Plug Domain APS56_RS01025 PF07690 Major Facilitator Superfamily APS56_RS01035 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS01035 PF00989 PAS fold APS56_RS01035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS01040 PF00072 Response regulator receiver domain APS56_RS01045 PF13426 PAS domain APS56_RS01045 PF00672 HAMP domain APS56_RS01045 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS01045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS01060 PF00106 short chain dehydrogenase APS56_RS01070 PF12848 ABC transporter APS56_RS01070 PF00005 ABC transporter APS56_RS01095 PF01588 Putative tRNA binding domain APS56_RS01095 PF03484 tRNA synthetase B5 domain APS56_RS01095 PF03483 B3/4 domain APS56_RS01095 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain APS56_RS01095 PF03147 Ferredoxin-fold anticodon binding domain APS56_RS01105 PF17191 RecG wedge domain APS56_RS01105 PF00271 Helicase conserved C-terminal domain APS56_RS01105 PF00270 DEAD/DEAH box helicase APS56_RS01110 PF11838 ERAP1-like C-terminal domain APS56_RS01110 PF01433 Peptidase family M1 domain APS56_RS01120 PF00578 AhpC/TSA family APS56_RS01130 PF00884 Sulfatase APS56_RS01135 PF00561 alpha/beta hydrolase fold APS56_RS01150 PF13276 HTH-like domain APS56_RS01150 PF00665 Integrase core domain APS56_RS01150 PF13333 Integrase core domain APS56_RS01210 PF09561 HpaII restriction endonuclease APS56_RS01215 PF00145 C-5 cytosine-specific DNA methylase APS56_RS01230 PF00149 Calcineurin-like phosphoesterase APS56_RS01245 PF13333 Integrase core domain APS56_RS01245 PF00665 Integrase core domain APS56_RS01245 PF13276 HTH-like domain APS56_RS01295 PF02899 Phage integrase, N-terminal SAM-like domain APS56_RS01295 PF00589 Phage integrase family APS56_RS01300 PF01746 tRNA (Guanine-1)-methyltransferase APS56_RS01335 PF00072 Response regulator receiver domain APS56_RS01335 PF04397 LytTr DNA-binding domain APS56_RS01340 PF03061 Thioesterase superfamily APS56_RS01345 PF00425 chorismate binding enzyme APS56_RS01350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS56_RS01350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS56_RS01360 PF13509 S1 domain APS56_RS01360 PF17783 CvfB-like winged helix domain APS56_RS01370 PF00578 AhpC/TSA family APS56_RS01375 PF10396 GTP-binding protein TrmE N-terminus APS56_RS01375 PF01926 50S ribosome-binding GTPase APS56_RS01375 PF12631 MnmE helical domain APS56_RS01385 PF00589 Phage integrase family APS56_RS01385 PF02899 Phage integrase, N-terminal SAM-like domain APS56_RS01445 PF00873 AcrB/AcrD/AcrF family APS56_RS01465 PF00403 Heavy-metal-associated domain APS56_RS01475 PF00873 AcrB/AcrD/AcrF family APS56_RS01495 PF00529 HlyD membrane-fusion protein of T1SS APS56_RS01495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS56_RS01500 PF00403 Heavy-metal-associated domain APS56_RS01530 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS56_RS01540 PF02780 Transketolase, C-terminal domain APS56_RS01540 PF02779 Transketolase, pyrimidine binding domain APS56_RS01550 PF03641 Possible lysine decarboxylase APS56_RS01555 PF17760 UvrA interaction domain APS56_RS01555 PF00005 ABC transporter APS56_RS01555 PF17755 UvrA DNA-binding domain APS56_RS01585 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS56_RS01585 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS56_RS01585 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS56_RS01585 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS56_RS01600 PF05362 Lon protease (S16) C-terminal proteolytic domain APS56_RS01600 PF02190 ATP-dependent protease La (LON) substrate-binding domain APS56_RS01600 PF00004 ATPase family associated with various cellular activities (AAA) APS56_RS01610 PF02224 Cytidylate kinase APS56_RS01630 PF00072 Response regulator receiver domain APS56_RS01630 PF04397 LytTr DNA-binding domain APS56_RS01635 PF06580 Histidine kinase APS56_RS01635 PF07694 5TMR of 5TMR-LYT APS56_RS01645 PF00575 S1 RNA binding domain APS56_RS01650 PF00156 Phosphoribosyl transferase domain APS56_RS01655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS56_RS01655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS56_RS01665 PF12706 Beta-lactamase superfamily domain APS56_RS01665 PF00753 Metallo-beta-lactamase superfamily APS56_RS01675 PF01243 Pyridoxamine 5'-phosphate oxidase APS56_RS01675 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region APS56_RS01690 PF00691 OmpA family APS56_RS01720 PF00691 OmpA family APS56_RS01745 PF17941 Polyphosphate kinase C-terminal domain 1 APS56_RS01745 PF13089 Polyphosphate kinase N-terminal domain APS56_RS01745 PF02503 Polyphosphate kinase middle domain APS56_RS01745 PF13090 Polyphosphate kinase C-terminal domain 2 APS56_RS01765 PF12169 DNA polymerase III subunits gamma and tau domain III APS56_RS01770 PF00034 Cytochrome c APS56_RS01770 PF14376 Haem-binding domain APS56_RS01770 PF03150 Di-haem cytochrome c peroxidase APS56_RS01790 PF14490 Helix-hairpin-helix containing domain APS56_RS01790 PF13538 UvrD-like helicase C-terminal domain APS56_RS01790 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain APS56_RS01800 PF02348 Cytidylyltransferase APS56_RS01810 PF00465 Iron-containing alcohol dehydrogenase APS56_RS01830 PF08281 Sigma-70, region 4 APS56_RS01830 PF04542 Sigma-70 region 2 APS56_RS01835 PF13847 Methyltransferase domain APS56_RS01840 PF00155 Aminotransferase class I and II APS56_RS01845 PF02086 D12 class N6 adenine-specific DNA methyltransferase APS56_RS01850 PF04556 DpnII restriction endonuclease APS56_RS01855 PF01555 DNA methylase APS56_RS01865 PF13677 Membrane MotB of proton-channel complex MotA/MotB APS56_RS01865 PF00691 OmpA family APS56_RS01875 PF12823 Domain of unknown function (DUF3817) APS56_RS01880 PF00924 Mechanosensitive ion channel APS56_RS01900 PF00180 Isocitrate/isopropylmalate dehydrogenase APS56_RS01905 PF08502 LeuA allosteric (dimerisation) domain APS56_RS01905 PF00682 HMGL-like APS56_RS01910 PF13229 Right handed beta helix region APS56_RS01910 PF12708 Pectate lyase superfamily protein APS56_RS01915 PF01502 Phosphoribosyl-AMP cyclohydrolase APS56_RS01915 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase APS56_RS01920 PF00977 Histidine biosynthesis protein APS56_RS01925 PF00977 Histidine biosynthesis protein APS56_RS01930 PF00117 Glutamine amidotransferase class-I APS56_RS01935 PF00475 Imidazoleglycerol-phosphate dehydratase APS56_RS01940 PF00155 Aminotransferase class I and II APS56_RS01945 PF00815 Histidinol dehydrogenase APS56_RS01950 PF01634 ATP phosphoribosyltransferase APS56_RS01950 PF08029 HisG, C-terminal domain APS56_RS01970 PF00675 Insulinase (Peptidase family M16) APS56_RS01970 PF05193 Peptidase M16 inactive domain APS56_RS01985 PF00593 TonB dependent receptor APS56_RS01985 PF07715 TonB-dependent Receptor Plug Domain APS56_RS01995 PF04539 Sigma-70 region 3 APS56_RS01995 PF04542 Sigma-70 region 2 APS56_RS01995 PF00140 Sigma-70 factor, region 1.2 APS56_RS01995 PF04545 Sigma-70, region 4 APS56_RS02010 PF00549 CoA-ligase APS56_RS02010 PF02629 CoA binding domain APS56_RS02015 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APS56_RS02015 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS02020 PF09285 Elongation factor P, C-terminal APS56_RS02020 PF08207 Elongation factor P (EF-P) KOW-like domain APS56_RS02020 PF01132 Elongation factor P (EF-P) OB domain APS56_RS02025 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 APS56_RS02025 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS02030 PF07977 FabA-like domain APS56_RS02030 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase APS56_RS02035 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APS56_RS02035 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS02040 PF01966 HD domain APS56_RS02045 PF02954 Bacterial regulatory protein, Fis family APS56_RS02045 PF00072 Response regulator receiver domain APS56_RS02045 PF00158 Sigma-54 interaction domain APS56_RS02050 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE APS56_RS02065 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APS56_RS02065 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APS56_RS02075 PF02397 Bacterial sugar transferase APS56_RS02080 PF02719 Polysaccharide biosynthesis protein APS56_RS02085 PF01761 3-dehydroquinate synthase APS56_RS02100 PF13614 AAA domain APS56_RS02100 PF13807 G-rich domain on putative tyrosine kinase APS56_RS02100 PF02706 Chain length determinant protein APS56_RS02110 PF02719 Polysaccharide biosynthesis protein APS56_RS02115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS56_RS02120 PF01370 NAD dependent epimerase/dehydratase family APS56_RS02125 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS56_RS02125 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APS56_RS02125 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS56_RS02130 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS56_RS02130 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS56_RS02130 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APS56_RS02145 PF00535 Glycosyl transferase family 2 APS56_RS02160 PF03062 MBOAT, membrane-bound O-acyltransferase family APS56_RS02175 PF00535 Glycosyl transferase family 2 APS56_RS02185 PF00535 Glycosyl transferase family 2 APS56_RS02190 PF13439 Glycosyltransferase Family 4 APS56_RS02190 PF00534 Glycosyl transferases group 1 APS56_RS02195 PF13477 Glycosyl transferase 4-like APS56_RS02195 PF00534 Glycosyl transferases group 1 APS56_RS02205 PF00501 AMP-binding enzyme APS56_RS02205 PF00668 Condensation domain APS56_RS02205 PF00550 Phosphopantetheine attachment site APS56_RS02205 PF13193 AMP-binding enzyme C-terminal domain APS56_RS02215 PF00551 Formyl transferase APS56_RS02225 PF02397 Bacterial sugar transferase APS56_RS02230 PF02397 Bacterial sugar transferase APS56_RS02250 PF03062 MBOAT, membrane-bound O-acyltransferase family APS56_RS02255 PF13404 AsnC-type helix-turn-helix domain APS56_RS02255 PF01037 Lrp/AsnC ligand binding domain APS56_RS02280 PF12706 Beta-lactamase superfamily domain APS56_RS02280 PF03099 Biotin/lipoate A/B protein ligase family APS56_RS02290 PF00578 AhpC/TSA family APS56_RS02295 PF00730 HhH-GPD superfamily base excision DNA repair protein APS56_RS02295 PF00633 Helix-hairpin-helix motif APS56_RS02295 PF10576 Iron-sulfur binding domain of endonuclease III APS56_RS02305 PF17755 UvrA DNA-binding domain APS56_RS02305 PF00005 ABC transporter APS56_RS02305 PF17760 UvrA interaction domain APS56_RS02310 PF00171 Aldehyde dehydrogenase family APS56_RS02320 PF00488 MutS domain V APS56_RS02320 PF01713 Smr domain APS56_RS02330 PF04134 Protein of unknown function, DUF393 APS56_RS02335 PF00581 Rhodanese-like domain APS56_RS02340 PF00375 Sodium:dicarboxylate symporter family APS56_RS02345 PF01264 Chorismate synthase APS56_RS02360 PF00893 Small Multidrug Resistance protein APS56_RS02365 PF02913 FAD linked oxidases, C-terminal domain APS56_RS02365 PF01565 FAD binding domain APS56_RS02365 PF13183 4Fe-4S dicluster domain APS56_RS02380 PF04107 Glutamate-cysteine ligase family 2(GCS2) APS56_RS02390 PF02548 Ketopantoate hydroxymethyltransferase APS56_RS02395 PF00849 RNA pseudouridylate synthase APS56_RS02400 PF03553 Na+/H+ antiporter family APS56_RS02405 PF10417 C-terminal domain of 1-Cys peroxiredoxin APS56_RS02405 PF00578 AhpC/TSA family APS56_RS02410 PF00085 Thioredoxin APS56_RS02420 PF00141 Peroxidase APS56_RS02425 PF08534 Redoxin APS56_RS02440 PF09397 Ftsk gamma domain APS56_RS02440 PF17854 FtsK alpha domain APS56_RS02440 PF01580 FtsK/SpoIIIE family APS56_RS02440 PF13491 4TM region of DNA translocase FtsK/SpoIIIE APS56_RS02455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase APS56_RS02455 PF00925 GTP cyclohydrolase II APS56_RS02460 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS56_RS02475 PF00589 Phage integrase family APS56_RS02475 PF02899 Phage integrase, N-terminal SAM-like domain APS56_RS02480 PF02311 AraC-like ligand binding domain APS56_RS02480 PF12833 Helix-turn-helix domain APS56_RS02515 PF13280 WYL domain APS56_RS02515 PF08279 HTH domain APS56_RS02565 PF01022 Bacterial regulatory protein, arsR family APS56_RS02590 PF08818 Domain of unknown function (DU1801) APS56_RS02600 PF07690 Major Facilitator Superfamily APS56_RS02625 PF01872 RibD C-terminal domain APS56_RS02645 PF12464 Maltose acetyltransferase APS56_RS02645 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS02660 PF01370 NAD dependent epimerase/dehydratase family APS56_RS02670 PF08241 Methyltransferase domain APS56_RS02680 PF07690 Major Facilitator Superfamily APS56_RS02695 PF00005 ABC transporter APS56_RS02700 PF07690 Major Facilitator Superfamily APS56_RS02795 PF13784 Fic/DOC family N-terminal APS56_RS02795 PF02661 Fic/DOC family APS56_RS02815 PF01679 Proteolipid membrane potential modulator APS56_RS02820 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region APS56_RS02820 PF07676 WD40-like Beta Propeller Repeat APS56_RS02820 PF00326 Prolyl oligopeptidase family APS56_RS02840 PF02678 Pirin APS56_RS02840 PF05726 Pirin C-terminal cupin domain APS56_RS02860 PF00005 ABC transporter APS56_RS02870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APS56_RS02870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APS56_RS02875 PF00365 Phosphofructokinase APS56_RS02885 PF00814 Glycoprotease family APS56_RS02910 PF01594 AI-2E family transporter APS56_RS02920 PF17678 Glycosyl hydrolase family 92 N-terminal domain APS56_RS02920 PF07971 Glycosyl hydrolase family 92 APS56_RS02925 PF04616 Glycosyl hydrolases family 43 APS56_RS02925 PF03422 Carbohydrate binding module (family 6) APS56_RS02930 PF07691 PA14 domain APS56_RS02930 PF02838 Glycosyl hydrolase family 20, domain 2 APS56_RS02930 PF00728 Glycosyl hydrolase family 20, catalytic domain APS56_RS02940 PF00884 Sulfatase APS56_RS02955 PF17678 Glycosyl hydrolase family 92 N-terminal domain APS56_RS02955 PF07971 Glycosyl hydrolase family 92 APS56_RS02960 PF16347 Domain of unknown function (DUF4976) APS56_RS02960 PF00884 Sulfatase APS56_RS02965 PF00728 Glycosyl hydrolase family 20, catalytic domain APS56_RS02965 PF02838 Glycosyl hydrolase family 20, domain 2 APS56_RS02965 PF07691 PA14 domain APS56_RS02980 PF14310 Fibronectin type III-like domain APS56_RS02980 PF01915 Glycosyl hydrolase family 3 C-terminal domain APS56_RS02980 PF00933 Glycosyl hydrolase family 3 N terminal domain APS56_RS02985 PF16385 Domain of unknown function APS56_RS02985 PF00884 Sulfatase APS56_RS02990 PF00884 Sulfatase APS56_RS02990 PF16385 Domain of unknown function APS56_RS03000 PF00884 Sulfatase APS56_RS03005 PF16385 Domain of unknown function APS56_RS03005 PF00884 Sulfatase APS56_RS03010 PF00884 Sulfatase APS56_RS03010 PF16347 Domain of unknown function (DUF4976) APS56_RS03015 PF14310 Fibronectin type III-like domain APS56_RS03015 PF07691 PA14 domain APS56_RS03015 PF00933 Glycosyl hydrolase family 3 N terminal domain APS56_RS03015 PF01915 Glycosyl hydrolase family 3 C-terminal domain APS56_RS03030 PF00884 Sulfatase APS56_RS03035 PF00884 Sulfatase APS56_RS03035 PF16347 Domain of unknown function (DUF4976) APS56_RS03040 PF07690 Major Facilitator Superfamily APS56_RS03050 PF07971 Glycosyl hydrolase family 92 APS56_RS03050 PF17678 Glycosyl hydrolase family 92 N-terminal domain APS56_RS03055 PF07691 PA14 domain APS56_RS03055 PF00728 Glycosyl hydrolase family 20, catalytic domain APS56_RS03055 PF02838 Glycosyl hydrolase family 20, domain 2 APS56_RS03060 PF01112 Asparaginase APS56_RS03075 PF04041 beta-1,4-mannooligosaccharide phosphorylase APS56_RS03085 PF17678 Glycosyl hydrolase family 92 N-terminal domain APS56_RS03085 PF07971 Glycosyl hydrolase family 92 APS56_RS03090 PF06580 Histidine kinase APS56_RS03090 PF07694 5TMR of 5TMR-LYT APS56_RS03090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS03095 PF00072 Response regulator receiver domain APS56_RS03095 PF04397 LytTr DNA-binding domain APS56_RS03100 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APS56_RS03100 PF02585 GlcNAc-PI de-N-acetylase APS56_RS03105 PF00593 TonB dependent receptor APS56_RS03105 PF07715 TonB-dependent Receptor Plug Domain APS56_RS03110 PF07980 SusD family APS56_RS03110 PF14322 Starch-binding associating with outer membrane APS56_RS03115 PF01416 tRNA pseudouridine synthase APS56_RS03135 PF02585 GlcNAc-PI de-N-acetylase APS56_RS03140 PF01293 Phosphoenolpyruvate carboxykinase APS56_RS03145 PF05971 RNA methyltransferase APS56_RS03155 PF00293 NUDIX domain APS56_RS03165 PF00005 ABC transporter APS56_RS03165 PF12848 ABC transporter APS56_RS03175 PF00691 OmpA family APS56_RS03175 PF01389 OmpA-like transmembrane domain APS56_RS03185 PF01039 Carboxyl transferase domain APS56_RS03205 PF00694 Aconitase C-terminal domain APS56_RS03210 PF00330 Aconitase family (aconitate hydratase) APS56_RS03215 PF03061 Thioesterase superfamily APS56_RS03245 PF07698 7TM receptor with intracellular HD hydrolase APS56_RS03245 PF07697 7TM-HD extracellular APS56_RS03245 PF01966 HD domain APS56_RS03250 PF00108 Thiolase, N-terminal domain APS56_RS03250 PF02803 Thiolase, C-terminal domain APS56_RS03255 PF00877 NlpC/P60 family APS56_RS03265 PF00521 DNA gyrase/topoisomerase IV, subunit A APS56_RS03265 PF03989 DNA gyrase C-terminal domain, beta-propeller APS56_RS03270 PF00004 ATPase family associated with various cellular activities (AAA) APS56_RS03270 PF17871 AAA lid domain APS56_RS03270 PF07724 AAA domain (Cdc48 subfamily) APS56_RS03270 PF10431 C-terminal, D2-small domain, of ClpB protein APS56_RS03270 PF02861 Clp amino terminal domain, pathogenicity island component APS56_RS03275 PF11700 Vacuole effluxer Atg22 like APS56_RS03285 PF01641 SelR domain APS56_RS03290 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS03295 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS03295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain APS56_RS03305 PF01220 Dehydroquinase class II APS56_RS03310 PF00589 Phage integrase family APS56_RS03310 PF02899 Phage integrase, N-terminal SAM-like domain APS56_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS03315 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS03315 PF09308 LuxQ, periplasmic APS56_RS03315 PF00072 Response regulator receiver domain APS56_RS03320 PF01966 HD domain APS56_RS03320 PF00013 KH domain APS56_RS03320 PF12072 Domain of unknown function (DUF3552) APS56_RS03335 PF01551 Peptidase family M23 APS56_RS03335 PF08460 Bacterial SH3 domain APS56_RS03345 PF00266 Aminotransferase class-V APS56_RS03380 PF00501 AMP-binding enzyme APS56_RS03380 PF13193 AMP-binding enzyme C-terminal domain APS56_RS03380 PF16177 Acetyl-coenzyme A synthetase N-terminus APS56_RS03385 PF00474 Sodium:solute symporter family APS56_RS03400 PF00194 Eukaryotic-type carbonic anhydrase APS56_RS03405 PF13419 Haloacid dehalogenase-like hydrolase APS56_RS03410 PF03061 Thioesterase superfamily APS56_RS03410 PF01008 Initiation factor 2 subunit family APS56_RS03415 PF00440 Bacterial regulatory proteins, tetR family APS56_RS03430 PF00465 Iron-containing alcohol dehydrogenase APS56_RS03440 PF00581 Rhodanese-like domain APS56_RS03440 PF17773 UPF0176 acylphosphatase like domain APS56_RS03455 PF00085 Thioredoxin APS56_RS03460 PF01654 Cytochrome bd terminal oxidase subunit I APS56_RS03465 PF02322 Cytochrome bd terminal oxidase subunit II APS56_RS03480 PF00294 pfkB family carbohydrate kinase APS56_RS03495 PF04371 Porphyromonas-type peptidyl-arginine deiminase APS56_RS03500 PF00795 Carbon-nitrogen hydrolase APS56_RS03520 PF00313 'Cold-shock' DNA-binding domain APS56_RS03530 PF00248 Aldo/keto reductase family APS56_RS03560 PF01048 Phosphorylase superfamily APS56_RS03570 PF01256 Carbohydrate kinase APS56_RS03575 PF00696 Amino acid kinase family APS56_RS03575 PF01842 ACT domain APS56_RS03575 PF13840 ACT domain APS56_RS03575 PF00742 Homoserine dehydrogenase APS56_RS03575 PF03447 Homoserine dehydrogenase, NAD binding domain APS56_RS03580 PF08544 GHMP kinases C terminal APS56_RS03580 PF00288 GHMP kinases N terminal domain APS56_RS03585 PF00291 Pyridoxal-phosphate dependent enzyme APS56_RS03585 PF14821 Threonine synthase N terminus APS56_RS03590 PF00072 Response regulator receiver domain APS56_RS03590 PF01627 Hpt domain APS56_RS03590 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS03590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS03590 PF00672 HAMP domain APS56_RS03590 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS56_RS03595 PF01571 Aminomethyltransferase folate-binding domain APS56_RS03595 PF08669 Glycine cleavage T-protein C-terminal barrel domain APS56_RS03600 PF04960 Glutaminase APS56_RS03610 PF01329 Pterin 4 alpha carbinolamine dehydratase APS56_RS03615 PF01709 Transcriptional regulator APS56_RS03625 PF13439 Glycosyltransferase Family 4 APS56_RS03625 PF00534 Glycosyl transferases group 1 APS56_RS03630 PF01915 Glycosyl hydrolase family 3 C-terminal domain APS56_RS03630 PF00933 Glycosyl hydrolase family 3 N terminal domain APS56_RS03640 PF13183 4Fe-4S dicluster domain APS56_RS03640 PF02754 Cysteine-rich domain APS56_RS03645 PF02754 Cysteine-rich domain APS56_RS03645 PF13183 4Fe-4S dicluster domain APS56_RS03655 PF01520 N-acetylmuramoyl-L-alanine amidase APS56_RS03665 PF01042 Endoribonuclease L-PSP APS56_RS03670 PF00072 Response regulator receiver domain APS56_RS03670 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS56_RS03670 PF01627 Hpt domain APS56_RS03670 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS03670 PF00672 HAMP domain APS56_RS03670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS03675 PF00478 IMP dehydrogenase / GMP reductase domain APS56_RS03690 PF04168 A predicted alpha-helical domain with a conserved ER motif. APS56_RS03690 PF14403 Circularly permuted ATP-grasp type 2 APS56_RS03695 PF08379 Bacterial transglutaminase-like N-terminal region APS56_RS03695 PF01841 Transglutaminase-like superfamily APS56_RS03700 PF00464 Serine hydroxymethyltransferase APS56_RS03715 PF10431 C-terminal, D2-small domain, of ClpB protein APS56_RS03715 PF02861 Clp amino terminal domain, pathogenicity island component APS56_RS03715 PF17871 AAA lid domain APS56_RS03715 PF07724 AAA domain (Cdc48 subfamily) APS56_RS03715 PF00004 ATPase family associated with various cellular activities (AAA) APS56_RS03720 PF01791 DeoC/LacD family aldolase APS56_RS03730 PF02682 Carboxyltransferase domain, subdomain C and D APS56_RS03735 PF03746 LamB/YcsF family APS56_RS03745 PF01078 Magnesium chelatase, subunit ChlI APS56_RS03745 PF13335 Magnesium chelatase, subunit ChlI C-terminal APS56_RS03755 PF03453 MoeA N-terminal region (domain I and II) APS56_RS03755 PF03454 MoeA C-terminal region (domain IV) APS56_RS03755 PF00994 Probable molybdopterin binding domain APS56_RS03760 PF03459 TOBE domain APS56_RS03760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS56_RS03765 PF01925 Sulfite exporter TauE/SafE APS56_RS03770 PF12804 MobA-like NTP transferase domain APS56_RS03780 PF00899 ThiF family APS56_RS03785 PF02391 MoaE protein APS56_RS03790 PF01967 MoaC family APS56_RS03790 PF00994 Probable molybdopterin binding domain APS56_RS03795 PF06463 Molybdenum Cofactor Synthesis C APS56_RS03795 PF04055 Radical SAM superfamily APS56_RS03800 PF07470 Glycosyl Hydrolase Family 88 APS56_RS03820 PF01758 Sodium Bile acid symporter family APS56_RS03830 PF01227 GTP cyclohydrolase I APS56_RS03835 PF00005 ABC transporter APS56_RS03855 PF01281 Ribosomal protein L9, N-terminal domain APS56_RS03855 PF03948 Ribosomal protein L9, C-terminal domain APS56_RS03860 PF01084 Ribosomal protein S18 APS56_RS03865 PF01250 Ribosomal protein S6 APS56_RS03870 PF00072 Response regulator receiver domain APS56_RS03870 PF04397 LytTr DNA-binding domain APS56_RS03875 PF00271 Helicase conserved C-terminal domain APS56_RS03875 PF17764 3′ DNA-binding domain (3′BD) APS56_RS03875 PF18074 Primosomal protein N C-terminal domain APS56_RS03875 PF04851 Type III restriction enzyme, res subunit APS56_RS03875 PF18319 PriA DNA helicase Cys-rich region (CRR) domain APS56_RS03895 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain APS56_RS03895 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain APS56_RS03900 PF02590 Predicted SPOUT methyltransferase APS56_RS03910 PF01725 Ham1 family APS56_RS03915 PF04607 Region found in RelA / SpoT proteins APS56_RS03915 PF02824 TGS domain APS56_RS03915 PF13291 ACT domain APS56_RS03920 PF01475 Ferric uptake regulator family APS56_RS03925 PF00709 Adenylosuccinate synthetase APS56_RS03940 PF00593 TonB dependent receptor APS56_RS03940 PF07715 TonB-dependent Receptor Plug Domain APS56_RS03955 PF03009 Glycerophosphoryl diester phosphodiesterase family APS56_RS03965 PF00202 Aminotransferase class-III APS56_RS03985 PF01488 Shikimate / quinate 5-dehydrogenase APS56_RS03985 PF08501 Shikimate dehydrogenase substrate binding domain APS56_RS04000 PF03819 MazG nucleotide pyrophosphohydrolase domain APS56_RS04010 PF01894 Uncharacterised protein family UPF0047 APS56_RS04020 PF00772 DnaB-like helicase N terminal domain APS56_RS04020 PF03796 DnaB-like helicase C terminal domain APS56_RS04025 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit APS56_RS04040 PF01702 Queuine tRNA-ribosyltransferase APS56_RS04055 PF01479 S4 domain APS56_RS04060 PF00156 Phosphoribosyl transferase domain APS56_RS04065 PF01202 Shikimate kinase APS56_RS04130 PF01593 Flavin containing amine oxidoreductase APS56_RS04150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS56_RS04150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS56_RS04155 PF00578 AhpC/TSA family APS56_RS04165 PF01327 Polypeptide deformylase APS56_RS04170 PF03652 Holliday junction resolvase APS56_RS04180 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS04180 PF14602 Hexapeptide repeat of succinyl-transferase APS56_RS04180 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal APS56_RS04190 PF00535 Glycosyl transferase family 2 APS56_RS04195 PF00534 Glycosyl transferases group 1 APS56_RS04210 PF01300 Telomere recombination APS56_RS04215 PF01743 Poly A polymerase head domain APS56_RS04215 PF00571 CBS domain APS56_RS04215 PF01368 DHH family APS56_RS04215 PF02272 DHHA1 domain APS56_RS04220 PF02628 Cytochrome oxidase assembly protein APS56_RS04250 PF00271 Helicase conserved C-terminal domain APS56_RS04250 PF17757 UvrB interaction domain APS56_RS04250 PF02151 UvrB/uvrC motif APS56_RS04250 PF12344 Ultra-violet resistance protein B APS56_RS04250 PF04851 Type III restriction enzyme, res subunit APS56_RS04270 PF08442 ATP-grasp domain APS56_RS04270 PF00549 CoA-ligase APS56_RS04275 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS56_RS04275 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain APS56_RS04285 PF04116 Fatty acid hydroxylase superfamily APS56_RS04295 PF04389 Peptidase family M28 APS56_RS04295 PF04151 Bacterial pre-peptidase C-terminal domain APS56_RS04300 PF03976 Polyphosphate kinase 2 (PPK2) APS56_RS04305 PF00158 Sigma-54 interaction domain APS56_RS04305 PF00072 Response regulator receiver domain APS56_RS04305 PF02954 Bacterial regulatory protein, Fis family APS56_RS04310 PF00924 Mechanosensitive ion channel APS56_RS04310 PF12795 Mechanosensitive ion channel porin domain APS56_RS04310 PF12794 Mechanosensitive ion channel inner membrane domain 1 APS56_RS04320 PF00005 ABC transporter APS56_RS04320 PF13732 Domain of unknown function (DUF4162) APS56_RS04325 PF00226 DnaJ domain APS56_RS04325 PF00684 DnaJ central domain APS56_RS04325 PF01556 DnaJ C terminal domain APS56_RS04330 PF01025 GrpE APS56_RS04335 PF04264 YceI-like domain APS56_RS04345 PF01738 Dienelactone hydrolase family APS56_RS04355 PF01569 PAP2 superfamily APS56_RS04365 PF01554 MatE APS56_RS04370 PF03060 Nitronate monooxygenase APS56_RS04375 PF00082 Subtilase family APS56_RS04385 PF02469 Fasciclin domain APS56_RS04395 PF02096 60Kd inner membrane protein APS56_RS04395 PF14849 YidC periplasmic domain APS56_RS04400 PF00117 Glutamine amidotransferase class-I APS56_RS04400 PF06418 CTP synthase N-terminus APS56_RS04405 PF12843 Putative quorum-sensing-regulated virulence factor APS56_RS04415 PF00117 Glutamine amidotransferase class-I APS56_RS04415 PF02540 NAD synthase APS56_RS04415 PF00958 GMP synthase C terminal domain APS56_RS04420 PF00282 Pyridoxal-dependent decarboxylase conserved domain APS56_RS04425 PF10079 Bacillithiol biosynthesis BshC APS56_RS04435 PF03473 MOSC domain APS56_RS04435 PF03475 3-alpha domain APS56_RS04445 PF01370 NAD dependent epimerase/dehydratase family APS56_RS04445 PF08338 Domain of unknown function (DUF1731) APS56_RS04455 PF01063 Amino-transferase class IV APS56_RS04475 PF02537 CrcB-like protein, Camphor Resistance (CrcB) APS56_RS04485 PF01037 Lrp/AsnC ligand binding domain APS56_RS04495 PF01842 ACT domain APS56_RS04495 PF00551 Formyl transferase APS56_RS04510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family APS56_RS04515 PF03462 PCRF domain APS56_RS04515 PF00472 RF-1 domain APS56_RS04520 PF00478 IMP dehydrogenase / GMP reductase domain APS56_RS04520 PF00571 CBS domain APS56_RS04530 PF00682 HMGL-like APS56_RS04540 PF01180 Dihydroorotate dehydrogenase APS56_RS04545 PF01546 Peptidase family M20/M25/M40 APS56_RS04545 PF07687 Peptidase dimerisation domain APS56_RS04550 PF16901 C-terminal domain of alpha-glycerophosphate oxidase APS56_RS04550 PF01266 FAD dependent oxidoreductase APS56_RS04555 PF00884 Sulfatase APS56_RS04575 PF14322 Starch-binding associating with outer membrane APS56_RS04575 PF07980 SusD family APS56_RS04580 PF00593 TonB dependent receptor APS56_RS04580 PF07715 TonB-dependent Receptor Plug Domain APS56_RS04595 PF16385 Domain of unknown function APS56_RS04595 PF00884 Sulfatase APS56_RS04600 PF16385 Domain of unknown function APS56_RS04600 PF00884 Sulfatase APS56_RS04615 PF00884 Sulfatase APS56_RS04615 PF16385 Domain of unknown function APS56_RS04620 PF09092 Lyase, N terminal APS56_RS04620 PF02278 Polysaccharide lyase family 8, super-sandwich domain APS56_RS04620 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain APS56_RS04620 PF09093 Lyase, catalytic APS56_RS04625 PF00884 Sulfatase APS56_RS04630 PF07470 Glycosyl Hydrolase Family 88 APS56_RS04650 PF07980 SusD family APS56_RS04650 PF14322 Starch-binding associating with outer membrane APS56_RS04655 PF00593 TonB dependent receptor APS56_RS04655 PF07715 TonB-dependent Receptor Plug Domain APS56_RS04665 PF00072 Response regulator receiver domain APS56_RS04665 PF07495 Y_Y_Y domain APS56_RS04665 PF12833 Helix-turn-helix domain APS56_RS04665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS04665 PF07494 Two component regulator propeller APS56_RS04665 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS04735 PF04002 RadC-like JAB domain APS56_RS04740 PF00436 Single-strand binding protein family APS56_RS04775 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS56_RS04800 PF07980 SusD family APS56_RS04800 PF14322 Starch-binding associating with outer membrane APS56_RS04805 PF00593 TonB dependent receptor APS56_RS04805 PF07715 TonB-dependent Receptor Plug Domain APS56_RS04815 PF00474 Sodium:solute symporter family APS56_RS04850 PF00356 Bacterial regulatory proteins, lacI family APS56_RS04870 PF00589 Phage integrase family APS56_RS04870 PF02899 Phage integrase, N-terminal SAM-like domain APS56_RS04890 PF00873 AcrB/AcrD/AcrF family APS56_RS04920 PF01925 Sulfite exporter TauE/SafE APS56_RS04925 PF00753 Metallo-beta-lactamase superfamily APS56_RS04925 PF00581 Rhodanese-like domain APS56_RS04945 PF00121 Triosephosphate isomerase APS56_RS04950 PF08534 Redoxin APS56_RS04955 PF00528 Binding-protein-dependent transport system inner membrane component APS56_RS04970 PF00809 Pterin binding enzyme APS56_RS04980 PF02457 DisA bacterial checkpoint controller nucleotide-binding APS56_RS04985 PF00664 ABC transporter transmembrane region APS56_RS04985 PF00005 ABC transporter APS56_RS04990 PF01416 tRNA pseudouridine synthase APS56_RS05005 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS56_RS05015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS56_RS05015 PF07497 Rho termination factor, RNA-binding domain APS56_RS05020 PF04616 Glycosyl hydrolases family 43 APS56_RS05025 PF03129 Anticodon binding domain APS56_RS05025 PF13393 Histidyl-tRNA synthetase APS56_RS05030 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APS56_RS05030 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS56_RS05035 PF00183 Hsp90 protein APS56_RS05050 PF02867 Ribonucleotide reductase, barrel domain APS56_RS05050 PF03477 ATP cone domain APS56_RS05050 PF00317 Ribonucleotide reductase, all-alpha domain APS56_RS05060 PF02769 AIR synthase related protein, C-terminal domain APS56_RS05060 PF00586 AIR synthase related protein, N-terminal domain APS56_RS05070 PF00120 Glutamine synthetase, catalytic domain APS56_RS05070 PF18318 Glutamine synthetase C-terminal domain APS56_RS05070 PF12437 Glutamine synthetase type III N terminal APS56_RS05075 PF03951 Glutamine synthetase, beta-Grasp domain APS56_RS05075 PF00120 Glutamine synthetase, catalytic domain APS56_RS05080 PF04542 Sigma-70 region 2 APS56_RS05080 PF08281 Sigma-70, region 4 APS56_RS05085 PF01699 Sodium/calcium exchanger protein APS56_RS05115 PF00696 Amino acid kinase family APS56_RS05115 PF01472 PUA domain APS56_RS05120 PF14748 Pyrroline-5-carboxylate reductase dimerisation APS56_RS05120 PF03807 NADP oxidoreductase coenzyme F420-dependent APS56_RS05135 PF02699 Preprotein translocase subunit APS56_RS05145 PF01029 NusB family APS56_RS05150 PF00005 ABC transporter APS56_RS05150 PF00664 ABC transporter transmembrane region APS56_RS05160 PF01588 Putative tRNA binding domain APS56_RS05170 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS56_RS05175 PF00270 DEAD/DEAH box helicase APS56_RS05175 PF00271 Helicase conserved C-terminal domain APS56_RS05175 PF00570 HRDC domain APS56_RS05175 PF16124 RecQ zinc-binding APS56_RS05175 PF09382 RQC domain APS56_RS05180 PF00571 CBS domain APS56_RS05180 PF01380 SIS domain APS56_RS05185 PF00902 Sec-independent protein translocase protein (TatC) APS56_RS05190 PF12399 Branched-chain amino acid ATP-binding cassette transporter APS56_RS05190 PF00005 ABC transporter APS56_RS05205 PF05661 Protein of unknown function (DUF808) APS56_RS05225 PF02397 Bacterial sugar transferase APS56_RS05230 PF13439 Glycosyltransferase Family 4 APS56_RS05230 PF00534 Glycosyl transferases group 1 APS56_RS05255 PF00535 Glycosyl transferase family 2 APS56_RS05275 PF02350 UDP-N-acetylglucosamine 2-epimerase APS56_RS05280 PF03102 NeuB family APS56_RS05280 PF08666 SAF domain APS56_RS05285 PF02348 Cytidylyltransferase APS56_RS05295 PF17843 MycE methyltransferase N-terminal APS56_RS05325 PF00535 Glycosyl transferase family 2 APS56_RS05330 PF00534 Glycosyl transferases group 1 APS56_RS05330 PF13439 Glycosyltransferase Family 4 APS56_RS05340 PF00535 Glycosyl transferase family 2 APS56_RS05345 PF00535 Glycosyl transferase family 2 APS56_RS05350 PF00535 Glycosyl transferase family 2 APS56_RS05355 PF00534 Glycosyl transferases group 1 APS56_RS05360 PF01209 ubiE/COQ5 methyltransferase family APS56_RS05365 PF00535 Glycosyl transferase family 2 APS56_RS05370 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS05370 PF12464 Maltose acetyltransferase APS56_RS05375 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS56_RS05385 PF00005 ABC transporter APS56_RS05400 PF00459 Inositol monophosphatase family APS56_RS05405 PF13614 AAA domain APS56_RS05415 PF12848 ABC transporter APS56_RS05415 PF00005 ABC transporter APS56_RS05415 PF16326 ABC transporter C-terminal domain APS56_RS05425 PF05736 OprF membrane domain APS56_RS05425 PF00691 OmpA family APS56_RS05430 PF01923 Cobalamin adenosyltransferase APS56_RS05440 PF07516 SecA Wing and Scaffold domain APS56_RS05440 PF01043 SecA preprotein cross-linking domain APS56_RS05440 PF07517 SecA DEAD-like domain APS56_RS05475 PF00270 DEAD/DEAH box helicase APS56_RS05475 PF00271 Helicase conserved C-terminal domain APS56_RS05480 PF01427 D-ala-D-ala dipeptidase APS56_RS05510 PF00293 NUDIX domain APS56_RS05515 PF16658 Class II release factor RF3, C-terminal domain APS56_RS05515 PF00009 Elongation factor Tu GTP binding domain APS56_RS05525 PF00623 RNA polymerase Rpb1, domain 2 APS56_RS05525 PF05000 RNA polymerase Rpb1, domain 4 APS56_RS05525 PF04998 RNA polymerase Rpb1, domain 5 APS56_RS05525 PF04983 RNA polymerase Rpb1, domain 3 APS56_RS05525 PF04997 RNA polymerase Rpb1, domain 1 APS56_RS05530 PF10385 RNA polymerase beta subunit external 1 domain APS56_RS05530 PF04561 RNA polymerase Rpb2, domain 2 APS56_RS05530 PF00562 RNA polymerase Rpb2, domain 6 APS56_RS05530 PF04565 RNA polymerase Rpb2, domain 3 APS56_RS05530 PF04560 RNA polymerase Rpb2, domain 7 APS56_RS05530 PF04563 RNA polymerase beta subunit APS56_RS05535 PF00542 Ribosomal protein L7/L12 C-terminal domain APS56_RS05535 PF16320 Ribosomal protein L7/L12 dimerisation domain APS56_RS05540 PF00466 Ribosomal protein L10 APS56_RS05545 PF00687 Ribosomal protein L1p/L10e family APS56_RS05550 PF03946 Ribosomal protein L11, N-terminal domain APS56_RS05550 PF00298 Ribosomal protein L11, RNA binding domain APS56_RS05555 PF00467 KOW motif APS56_RS05555 PF02357 Transcription termination factor nusG APS56_RS05570 PF03144 Elongation factor Tu domain 2 APS56_RS05570 PF00009 Elongation factor Tu GTP binding domain APS56_RS05570 PF03143 Elongation factor Tu C-terminal domain APS56_RS05595 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein APS56_RS05595 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus APS56_RS05600 PF02899 Phage integrase, N-terminal SAM-like domain APS56_RS05600 PF00589 Phage integrase family APS56_RS05605 PF01165 Ribosomal protein S21 APS56_RS05615 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS56_RS05615 PF02770 Acyl-CoA dehydrogenase, middle domain APS56_RS05615 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS56_RS05625 PF01235 Sodium:alanine symporter family APS56_RS05630 PF02254 TrkA-N domain APS56_RS05630 PF07885 Ion channel APS56_RS05645 PF00884 Sulfatase APS56_RS05655 PF01432 Peptidase family M3 APS56_RS05660 PF00011 Hsp20/alpha crystallin family APS56_RS05680 PF01022 Bacterial regulatory protein, arsR family APS56_RS05700 PF07075 Protein of unknown function (DUF1343) APS56_RS05715 PF06940 Domain of unknown function (DUF1287) APS56_RS05730 PF00005 ABC transporter APS56_RS05740 PF00535 Glycosyl transferase family 2 APS56_RS05750 PF05523 WxcM-like, C-terminal APS56_RS05765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS56_RS05785 PF03144 Elongation factor Tu domain 2 APS56_RS05785 PF14492 Elongation Factor G, domain II APS56_RS05785 PF00009 Elongation factor Tu GTP binding domain APS56_RS05785 PF00679 Elongation factor G C-terminus APS56_RS05795 PF00793 DAHP synthetase I family APS56_RS05815 PF00106 short chain dehydrogenase APS56_RS05820 PF09087 Cyclomaltodextrinase, N-terminal APS56_RS05820 PF10438 Cyclo-malto-dextrinase C-terminal domain APS56_RS05820 PF00128 Alpha amylase, catalytic domain APS56_RS05825 PF04542 Sigma-70 region 2 APS56_RS05825 PF08281 Sigma-70, region 4 APS56_RS05880 PF07690 Major Facilitator Superfamily APS56_RS05895 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS56_RS05905 PF08666 SAF domain APS56_RS05905 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APS56_RS05910 PF00884 Sulfatase APS56_RS05915 PF00933 Glycosyl hydrolase family 3 N terminal domain APS56_RS05915 PF01915 Glycosyl hydrolase family 3 C-terminal domain APS56_RS05915 PF14310 Fibronectin type III-like domain APS56_RS05925 PF01229 Glycosyl hydrolases family 39 APS56_RS05940 PF00884 Sulfatase APS56_RS05940 PF16347 Domain of unknown function (DUF4976) APS56_RS05950 PF00884 Sulfatase APS56_RS05955 PF00756 Putative esterase APS56_RS05955 PF00331 Glycosyl hydrolase family 10 APS56_RS05955 PF03422 Carbohydrate binding module (family 6) APS56_RS05955 PF00404 Dockerin type I domain APS56_RS05960 PF00884 Sulfatase APS56_RS05970 PF01229 Glycosyl hydrolases family 39 APS56_RS05980 PF03422 Carbohydrate binding module (family 6) APS56_RS05980 PF04616 Glycosyl hydrolases family 43 APS56_RS06005 PF01055 Glycosyl hydrolases family 31 APS56_RS06005 PF16338 Domain of unknown function (DUF4968) APS56_RS06005 PF17137 Domain of unknown function (DUF5110) APS56_RS06010 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain APS56_RS06010 PF16347 Domain of unknown function (DUF4976) APS56_RS06010 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain APS56_RS06010 PF00884 Sulfatase APS56_RS06010 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain APS56_RS06025 PF00933 Glycosyl hydrolase family 3 N terminal domain APS56_RS06025 PF01915 Glycosyl hydrolase family 3 C-terminal domain APS56_RS06025 PF14310 Fibronectin type III-like domain APS56_RS06090 PF16347 Domain of unknown function (DUF4976) APS56_RS06090 PF00884 Sulfatase APS56_RS06105 PF10566 Glycoside hydrolase 97 APS56_RS06105 PF14508 Glycosyl-hydrolase 97 N-terminal APS56_RS06105 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation APS56_RS06115 PF16385 Domain of unknown function APS56_RS06115 PF00884 Sulfatase APS56_RS06120 PF00756 Putative esterase APS56_RS06125 PF00083 Sugar (and other) transporter APS56_RS06150 PF07715 TonB-dependent Receptor Plug Domain APS56_RS06150 PF00593 TonB dependent receptor APS56_RS06175 PF00593 TonB dependent receptor APS56_RS06175 PF07715 TonB-dependent Receptor Plug Domain APS56_RS06185 PF07494 Two component regulator propeller APS56_RS06185 PF07495 Y_Y_Y domain APS56_RS06185 PF12833 Helix-turn-helix domain APS56_RS06185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS06185 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS06185 PF00072 Response regulator receiver domain APS56_RS06195 PF02397 Bacterial sugar transferase APS56_RS06205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS56_RS06205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS56_RS06205 PF02142 MGS-like domain APS56_RS06210 PF02754 Cysteine-rich domain APS56_RS06215 PF13183 4Fe-4S dicluster domain APS56_RS06215 PF11870 Domain of unknown function (DUF3390) APS56_RS06215 PF02589 LUD domain APS56_RS06220 PF02589 LUD domain APS56_RS06240 PF14322 Starch-binding associating with outer membrane APS56_RS06240 PF07980 SusD family APS56_RS06245 PF00593 TonB dependent receptor APS56_RS06245 PF07715 TonB-dependent Receptor Plug Domain APS56_RS06265 PF02838 Glycosyl hydrolase family 20, domain 2 APS56_RS06265 PF07691 PA14 domain APS56_RS06265 PF00728 Glycosyl hydrolase family 20, catalytic domain APS56_RS06270 PF07494 Two component regulator propeller APS56_RS06270 PF07495 Y_Y_Y domain APS56_RS06270 PF12833 Helix-turn-helix domain APS56_RS06270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS06270 PF00072 Response regulator receiver domain APS56_RS06270 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS06280 PF00072 Response regulator receiver domain APS56_RS06280 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS06280 PF13188 PAS domain APS56_RS06280 PF08448 PAS fold APS56_RS06280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS06285 PF00158 Sigma-54 interaction domain APS56_RS06285 PF00072 Response regulator receiver domain APS56_RS06285 PF02954 Bacterial regulatory protein, Fis family APS56_RS06290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APS56_RS06290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APS56_RS06295 PF03449 Transcription elongation factor, N-terminal APS56_RS06295 PF01272 Transcription elongation factor, GreA/GreB, C-term APS56_RS06305 PF00356 Bacterial regulatory proteins, lacI family APS56_RS06315 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APS56_RS06325 PF02417 Chromate transporter APS56_RS06335 PF07980 SusD family APS56_RS06335 PF14322 Starch-binding associating with outer membrane APS56_RS06340 PF00593 TonB dependent receptor APS56_RS06340 PF07715 TonB-dependent Receptor Plug Domain APS56_RS06355 PF00356 Bacterial regulatory proteins, lacI family APS56_RS06380 PF01435 Peptidase family M48 APS56_RS06390 PF01676 Metalloenzyme superfamily APS56_RS06390 PF06415 BPG-independent PGAM N-terminus (iPGM_N) APS56_RS06400 PF00557 Metallopeptidase family M24 APS56_RS06405 PF01209 ubiE/COQ5 methyltransferase family APS56_RS06410 PF04241 Protein of unknown function (DUF423) APS56_RS06415 PF02424 ApbE family APS56_RS06435 PF13472 GDSL-like Lipase/Acylhydrolase family APS56_RS06440 PF00005 ABC transporter APS56_RS06455 PF00970 Oxidoreductase FAD-binding domain APS56_RS06455 PF00111 2Fe-2S iron-sulfur cluster binding domain APS56_RS06455 PF00175 Oxidoreductase NAD-binding domain APS56_RS06460 PF02508 Rnf-Nqr subunit, membrane protein APS56_RS06465 PF02508 Rnf-Nqr subunit, membrane protein APS56_RS06470 PF04205 FMN-binding domain APS56_RS06475 PF03116 NQR2, RnfD, RnfE family APS56_RS06480 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) APS56_RS06480 PF11973 NQRA C-terminal domain APS56_RS06490 PF04379 ApaG domain APS56_RS06495 PF07687 Peptidase dimerisation domain APS56_RS06495 PF01546 Peptidase family M20/M25/M40 APS56_RS06510 PF01225 Mur ligase family, catalytic domain APS56_RS06510 PF02875 Mur ligase family, glutamate ligase domain APS56_RS06510 PF08245 Mur ligase middle domain APS56_RS06520 PF07703 Alpha-2-macroglobulin bait region domain APS56_RS06520 PF00207 Alpha-2-macroglobulin family APS56_RS06520 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain APS56_RS06520 PF01835 MG2 domain APS56_RS06520 PF07678 A-macroglobulin TED domain APS56_RS06545 PF00027 Cyclic nucleotide-binding domain APS56_RS06545 PF00520 Ion transport protein APS56_RS06550 PF01926 50S ribosome-binding GTPase APS56_RS06550 PF01018 GTP1/OBG APS56_RS06560 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain APS56_RS06560 PF02222 ATP-grasp domain APS56_RS06565 PF00731 AIR carboxylase APS56_RS06570 PF01432 Peptidase family M3 APS56_RS06590 PF02347 Glycine cleavage system P-protein APS56_RS06595 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS56_RS06595 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APS56_RS06625 PF13276 HTH-like domain APS56_RS06625 PF00665 Integrase core domain APS56_RS06625 PF13333 Integrase core domain APS56_RS06655 PF00884 Sulfatase APS56_RS06665 PF00535 Glycosyl transferase family 2 APS56_RS06680 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase APS56_RS06685 PF02405 Permease MlaE APS56_RS06690 PF00005 ABC transporter APS56_RS06700 PF01050 Mannose-6-phosphate isomerase APS56_RS06700 PF00483 Nucleotidyl transferase APS56_RS06715 PF13419 Haloacid dehalogenase-like hydrolase APS56_RS06720 PF00106 short chain dehydrogenase APS56_RS06725 PF04389 Peptidase family M28 APS56_RS06725 PF04151 Bacterial pre-peptidase C-terminal domain APS56_RS06730 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS56_RS06730 PF00364 Biotin-requiring enzyme APS56_RS06730 PF02817 e3 binding domain APS56_RS06735 PF00676 Dehydrogenase E1 component APS56_RS06740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APS56_RS06760 PF01225 Mur ligase family, catalytic domain APS56_RS06760 PF02875 Mur ligase family, glutamate ligase domain APS56_RS06760 PF08245 Mur ligase middle domain APS56_RS06765 PF00196 Bacterial regulatory proteins, luxR family APS56_RS06765 PF00072 Response regulator receiver domain APS56_RS06775 PF00005 ABC transporter APS56_RS06790 PF01872 RibD C-terminal domain APS56_RS06810 PF08818 Domain of unknown function (DU1801) APS56_RS06840 PF01022 Bacterial regulatory protein, arsR family APS56_RS06885 PF08279 HTH domain APS56_RS06885 PF13280 WYL domain APS56_RS06930 PF01022 Bacterial regulatory protein, arsR family APS56_RS06935 PF07690 Major Facilitator Superfamily APS56_RS06940 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term APS56_RS06940 PF12833 Helix-turn-helix domain APS56_RS06975 PF00004 ATPase family associated with various cellular activities (AAA) APS56_RS07000 PF01734 Patatin-like phospholipase APS56_RS07005 PF01520 N-acetylmuramoyl-L-alanine amidase APS56_RS07085 PF04002 RadC-like JAB domain APS56_RS07090 PF00436 Single-strand binding protein family APS56_RS07115 PF08241 Methyltransferase domain APS56_RS07150 PF00873 AcrB/AcrD/AcrF family APS56_RS07160 PF12848 ABC transporter APS56_RS07160 PF00005 ABC transporter APS56_RS07160 PF16326 ABC transporter C-terminal domain APS56_RS07170 PF01266 FAD dependent oxidoreductase APS56_RS07190 PF03781 Sulfatase-modifying factor enzyme 1 APS56_RS07200 PF01751 Toprim domain APS56_RS07200 PF13368 Topoisomerase C-terminal repeat APS56_RS07200 PF01131 DNA topoisomerase APS56_RS07210 PF01938 TRAM domain APS56_RS07210 PF04055 Radical SAM superfamily APS56_RS07210 PF00919 Uncharacterized protein family UPF0004 APS56_RS07215 PF02954 Bacterial regulatory protein, Fis family APS56_RS07215 PF06490 Flagellar regulatory protein FleQ APS56_RS07215 PF00158 Sigma-54 interaction domain APS56_RS07235 PF00166 Chaperonin 10 Kd subunit APS56_RS07240 PF00118 TCP-1/cpn60 chaperonin family APS56_RS07260 PF00348 Polyprenyl synthetase APS56_RS07265 PF04055 Radical SAM superfamily APS56_RS07270 PF02547 Queuosine biosynthesis protein APS56_RS07275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS56_RS07295 PF02580 D-Tyr-tRNA(Tyr) deacylase APS56_RS07300 PF03193 RsgA GTPase APS56_RS07300 PF16745 RsgA N-terminal domain APS56_RS07310 PF00793 DAHP synthetase I family APS56_RS07310 PF18152 DAHP synthase ferredoxin-like domain APS56_RS07315 PF01842 ACT domain APS56_RS07315 PF02153 Prephenate dehydrogenase APS56_RS07320 PF00155 Aminotransferase class I and II APS56_RS07325 PF01817 Chorismate mutase type II APS56_RS07325 PF00800 Prephenate dehydratase APS56_RS07330 PF00005 ABC transporter APS56_RS07335 PF07085 DRTGG domain APS56_RS07335 PF01515 Phosphate acetyl/butaryl transferase APS56_RS07340 PF00871 Acetokinase family APS56_RS07355 PF02219 Methylenetetrahydrofolate reductase APS56_RS07360 PF00809 Pterin binding enzyme APS56_RS07360 PF02574 Homocysteine S-methyltransferase APS56_RS07360 PF02607 B12 binding domain APS56_RS07360 PF02965 Vitamin B12 dependent methionine synthase, activation domain APS56_RS07360 PF02310 B12 binding domain APS56_RS07365 PF02574 Homocysteine S-methyltransferase APS56_RS07365 PF02965 Vitamin B12 dependent methionine synthase, activation domain APS56_RS07365 PF02310 B12 binding domain APS56_RS07365 PF02607 B12 binding domain APS56_RS07365 PF00809 Pterin binding enzyme APS56_RS07370 PF00291 Pyridoxal-phosphate dependent enzyme APS56_RS07375 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS07380 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS07385 PF14824 Sirohaem biosynthesis protein central APS56_RS07385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS56_RS07385 PF10414 Sirohaem synthase dimerisation region APS56_RS07390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS56_RS07395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain APS56_RS07395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS56_RS07400 PF00009 Elongation factor Tu GTP binding domain APS56_RS07405 PF01507 Phosphoadenosine phosphosulfate reductase family APS56_RS07410 PF01507 Phosphoadenosine phosphosulfate reductase family APS56_RS07420 PF02082 Transcriptional regulator APS56_RS07425 PF01053 Cys/Met metabolism PLP-dependent enzyme APS56_RS07430 PF00742 Homoserine dehydrogenase APS56_RS07430 PF03447 Homoserine dehydrogenase, NAD binding domain APS56_RS07430 PF01842 ACT domain APS56_RS07430 PF00696 Amino acid kinase family APS56_RS07430 PF13840 ACT domain APS56_RS07435 PF01053 Cys/Met metabolism PLP-dependent enzyme APS56_RS07445 PF00682 HMGL-like APS56_RS07445 PF08502 LeuA allosteric (dimerisation) domain APS56_RS07450 PF00180 Isocitrate/isopropylmalate dehydrogenase APS56_RS07455 PF07859 alpha/beta hydrolase fold APS56_RS07455 PF13472 GDSL-like Lipase/Acylhydrolase family APS56_RS07465 PF00206 Lyase APS56_RS07475 PF00696 Amino acid kinase family APS56_RS07480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain APS56_RS07480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain APS56_RS07485 PF01472 PUA domain APS56_RS07485 PF00696 Amino acid kinase family APS56_RS07490 PF00171 Aldehyde dehydrogenase family APS56_RS07495 PF00202 Aminotransferase class-III APS56_RS07500 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS56_RS07500 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS56_RS07505 PF00764 Arginosuccinate synthase APS56_RS07525 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS56_RS07525 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS07545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS56_RS07545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS07570 PF00849 RNA pseudouridylate synthase APS56_RS07575 PF01131 DNA topoisomerase APS56_RS07575 PF01751 Toprim domain APS56_RS07615 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS56_RS07620 PF03458 UPF0126 domain APS56_RS07645 PF07726 ATPase family associated with various cellular activities (AAA) APS56_RS07645 PF17863 AAA lid domain APS56_RS07665 PF07715 TonB-dependent Receptor Plug Domain APS56_RS07665 PF00593 TonB dependent receptor APS56_RS07675 PF00210 Ferritin-like domain APS56_RS07680 PF03466 LysR substrate binding domain APS56_RS07680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family APS56_RS07740 PF01029 NusB family APS56_RS07740 PF01189 16S rRNA methyltransferase RsmB/F APS56_RS07760 PF02769 AIR synthase related protein, C-terminal domain APS56_RS07760 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain APS56_RS07760 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal APS56_RS07765 PF01226 Formate/nitrite transporter APS56_RS07770 PF04055 Radical SAM superfamily APS56_RS07775 PF01228 Glycine radical APS56_RS07775 PF02901 Pyruvate formate lyase-like APS56_RS07780 PF14592 Chondroitinase B APS56_RS07785 PF00501 AMP-binding enzyme APS56_RS07790 PF01047 MarR family APS56_RS07795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain APS56_RS07795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain APS56_RS07795 PF00378 Enoyl-CoA hydratase/isomerase APS56_RS07800 PF02803 Thiolase, C-terminal domain APS56_RS07800 PF00108 Thiolase, N-terminal domain APS56_RS07805 PF02770 Acyl-CoA dehydrogenase, middle domain APS56_RS07805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS56_RS07805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS56_RS07810 PF04389 Peptidase family M28 APS56_RS07810 PF04151 Bacterial pre-peptidase C-terminal domain APS56_RS07825 PF00534 Glycosyl transferases group 1 APS56_RS07825 PF13439 Glycosyltransferase Family 4 APS56_RS07830 PF05116 Sucrose-6F-phosphate phosphohydrolase APS56_RS07855 PF00072 Response regulator receiver domain APS56_RS07855 PF00486 Transcriptional regulatory protein, C terminal APS56_RS07860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS07860 PF18415 Histidine kinase receptor ArcB trans-membrane domain APS56_RS07860 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS07865 PF00403 Heavy-metal-associated domain APS56_RS07875 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS56_RS07885 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP APS56_RS07885 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS56_RS07885 PF00034 Cytochrome c APS56_RS07890 PF13746 4Fe-4S dicluster domain APS56_RS07890 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase APS56_RS07890 PF12801 4Fe-4S binding domain APS56_RS07905 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain APS56_RS07905 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain APS56_RS07910 PF08544 GHMP kinases C terminal APS56_RS07910 PF00288 GHMP kinases N terminal domain APS56_RS07910 PF10509 Galactokinase galactose-binding signature APS56_RS07925 PF00474 Sodium:solute symporter family APS56_RS07930 PF02627 Carboxymuconolactone decarboxylase family APS56_RS07960 PF01048 Phosphorylase superfamily APS56_RS07985 PF00149 Calcineurin-like phosphoesterase APS56_RS07990 PF02785 Biotin carboxylase C-terminal domain APS56_RS07990 PF00682 HMGL-like APS56_RS07990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS56_RS07990 PF00364 Biotin-requiring enzyme APS56_RS07990 PF02436 Conserved carboxylase domain APS56_RS07990 PF00289 Biotin carboxylase, N-terminal domain APS56_RS08005 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS08005 PF18267 Rubredoxin NAD+ reductase C-terminal domain APS56_RS08005 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain APS56_RS08005 PF04324 BFD-like [2Fe-2S] binding domain APS56_RS08015 PF00535 Glycosyl transferase family 2 APS56_RS08030 PF01642 Methylmalonyl-CoA mutase APS56_RS08030 PF02310 B12 binding domain APS56_RS08035 PF01642 Methylmalonyl-CoA mutase APS56_RS08040 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain APS56_RS08040 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain APS56_RS08045 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit APS56_RS08050 PF00364 Biotin-requiring enzyme APS56_RS08060 PF01039 Carboxyl transferase domain APS56_RS08085 PF01916 Deoxyhypusine synthase APS56_RS08090 PF00491 Arginase family APS56_RS08095 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain APS56_RS08095 PF17944 Arginine decarboxylase C-terminal helical extension APS56_RS08095 PF17810 Arginine decarboxylase helical bundle domain APS56_RS08100 PF01026 TatD related DNase APS56_RS08105 PF17763 Glutaminase/Asparaginase C-terminal domain APS56_RS08105 PF00710 Asparaginase, N-terminal APS56_RS08115 PF01618 MotA/TolQ/ExbB proton channel family APS56_RS08145 PF00309 Sigma-54 factor, Activator interacting domain (AID) APS56_RS08145 PF04963 Sigma-54 factor, core binding domain APS56_RS08145 PF04552 Sigma-54, DNA binding domain APS56_RS08150 PF00152 tRNA synthetases class II (D, K and N) APS56_RS08150 PF01336 OB-fold nucleic acid binding domain APS56_RS08165 PF01765 Ribosome recycling factor APS56_RS08170 PF00696 Amino acid kinase family APS56_RS08175 PF00889 Elongation factor TS APS56_RS08180 PF00318 Ribosomal protein S2 APS56_RS08185 PF00380 Ribosomal protein S9/S16 APS56_RS08190 PF00572 Ribosomal protein L13 APS56_RS08195 PF01098 Cell cycle protein APS56_RS08200 PF03717 Penicillin-binding Protein dimerisation domain APS56_RS08200 PF00905 Penicillin binding protein transpeptidase domain APS56_RS08225 PF07689 KaiB domain APS56_RS08225 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS08225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS08235 PF01808 AICARFT/IMPCHase bienzyme APS56_RS08235 PF02142 MGS-like domain APS56_RS08275 PF02527 rRNA small subunit methyltransferase G APS56_RS08280 PF00487 Fatty acid desaturase APS56_RS08285 PF00155 Aminotransferase class I and II APS56_RS08290 PF00210 Ferritin-like domain APS56_RS08315 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS08315 PF08446 PAS fold APS56_RS08315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS08315 PF01590 GAF domain APS56_RS08315 PF00360 Phytochrome region APS56_RS08390 PF01712 Deoxynucleoside kinase APS56_RS08400 PF03030 Inorganic H+ pyrophosphatase APS56_RS08405 PF00834 Ribulose-phosphate 3 epimerase family APS56_RS08415 PF00571 CBS domain APS56_RS08435 PF09424 Yqey-like protein APS56_RS08440 PF12327 FtsZ family, C-terminal domain APS56_RS08440 PF00091 Tubulin/FtsZ family, GTPase domain APS56_RS08445 PF02491 SHS2 domain inserted in FTSA APS56_RS08455 PF08245 Mur ligase middle domain APS56_RS08455 PF02875 Mur ligase family, glutamate ligase domain APS56_RS08455 PF01225 Mur ligase family, catalytic domain APS56_RS08460 PF03033 Glycosyltransferase family 28 N-terminal domain APS56_RS08460 PF04101 Glycosyltransferase family 28 C-terminal domain APS56_RS08465 PF01098 Cell cycle protein APS56_RS08470 PF08245 Mur ligase middle domain APS56_RS08470 PF02875 Mur ligase family, glutamate ligase domain APS56_RS08475 PF00953 Glycosyl transferase family 4 APS56_RS08475 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 APS56_RS08480 PF01225 Mur ligase family, catalytic domain APS56_RS08480 PF08245 Mur ligase middle domain APS56_RS08480 PF02875 Mur ligase family, glutamate ligase domain APS56_RS08485 PF00905 Penicillin binding protein transpeptidase domain APS56_RS08485 PF03793 PASTA domain APS56_RS08485 PF03717 Penicillin-binding Protein dimerisation domain APS56_RS08495 PF01795 MraW methylase family APS56_RS08500 PF02381 MraZ protein, putative antitoxin-like APS56_RS08505 PF12146 Serine aminopeptidase, S33 APS56_RS08510 PF01926 50S ribosome-binding GTPase APS56_RS08515 PF12911 N-terminal TM domain of oligopeptide transport permease C APS56_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component APS56_RS08520 PF17804 Tail specific protease N-terminal domain APS56_RS08520 PF11818 C-terminal domain of tail specific protease (DUF3340) APS56_RS08520 PF00595 PDZ domain APS56_RS08520 PF03572 Peptidase family S41 APS56_RS08525 PF01975 Survival protein SurE APS56_RS08535 PF02684 Lipid-A-disaccharide synthetase APS56_RS08540 PF00877 NlpC/P60 family APS56_RS08545 PF00753 Metallo-beta-lactamase superfamily APS56_RS08545 PF13567 Domain of unknown function (DUF4131) APS56_RS08545 PF03772 Competence protein APS56_RS08550 PF11412 Disulphide bond corrector protein DsbC APS56_RS08550 PF02683 Cytochrome C biogenesis protein transmembrane region APS56_RS08550 PF13098 Thioredoxin-like domain APS56_RS08555 PF00854 POT family APS56_RS08560 PF00854 POT family APS56_RS08565 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region APS56_RS08565 PF00326 Prolyl oligopeptidase family APS56_RS08570 PF00368 Hydroxymethylglutaryl-coenzyme A reductase APS56_RS08585 PF01595 Cyclin M transmembrane N-terminal domain APS56_RS08585 PF00571 CBS domain APS56_RS08585 PF03471 Transporter associated domain APS56_RS08610 PF03309 Type III pantothenate kinase APS56_RS08660 PF12161 HsdM N-terminal domain APS56_RS08660 PF02384 N-6 DNA Methylase APS56_RS08685 PF11867 Domain of unknown function (DUF3387) APS56_RS08685 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) APS56_RS08685 PF18766 SWI2/SNF2 ATPase APS56_RS08715 PF00582 Universal stress protein family APS56_RS08720 PF06969 HemN C-terminal domain APS56_RS08720 PF04055 Radical SAM superfamily APS56_RS08725 PF00080 Copper/zinc superoxide dismutase (SODC) APS56_RS08740 PF00127 Copper binding proteins, plastocyanin/azurin family APS56_RS08745 PF00171 Aldehyde dehydrogenase family APS56_RS08750 PF00585 C-terminal regulatory domain of Threonine dehydratase APS56_RS08750 PF00291 Pyridoxal-phosphate dependent enzyme APS56_RS08755 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain APS56_RS08755 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain APS56_RS08765 PF00205 Thiamine pyrophosphate enzyme, central domain APS56_RS08765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain APS56_RS08765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS56_RS08770 PF00920 Dehydratase family APS56_RS08775 PF00438 S-adenosylmethionine synthetase, N-terminal domain APS56_RS08775 PF02773 S-adenosylmethionine synthetase, C-terminal domain APS56_RS08775 PF02772 S-adenosylmethionine synthetase, central domain APS56_RS08785 PF00664 ABC transporter transmembrane region APS56_RS08785 PF00005 ABC transporter APS56_RS08795 PF00534 Glycosyl transferases group 1 APS56_RS08795 PF08323 Starch synthase catalytic domain APS56_RS08805 PF00364 Biotin-requiring enzyme APS56_RS08805 PF02779 Transketolase, pyrimidine binding domain APS56_RS08805 PF02780 Transketolase, C-terminal domain APS56_RS08810 PF01012 Electron transfer flavoprotein domain APS56_RS08815 PF00766 Electron transfer flavoprotein FAD-binding domain APS56_RS08815 PF01012 Electron transfer flavoprotein domain APS56_RS08825 PF07670 Nucleoside recognition APS56_RS08825 PF07662 Na+ dependent nucleoside transporter C-terminus APS56_RS08825 PF01773 Na+ dependent nucleoside transporter N-terminus APS56_RS08830 PF00303 Thymidylate synthase APS56_RS08835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS56_RS08835 PF00128 Alpha amylase, catalytic domain APS56_RS08835 PF02806 Alpha amylase, C-terminal all-beta domain APS56_RS08840 PF00186 Dihydrofolate reductase APS56_RS08850 PF07470 Glycosyl Hydrolase Family 88 APS56_RS08870 PF14602 Hexapeptide repeat of succinyl-transferase APS56_RS08870 PF12464 Maltose acetyltransferase APS56_RS08885 PF00698 Acyl transferase domain APS56_RS08890 PF01252 Signal peptidase (SPase) II APS56_RS08895 PF16363 GDP-mannose 4,6 dehydratase APS56_RS08900 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family APS56_RS08910 PF00041 Fibronectin type III domain APS56_RS08910 PF00704 Glycosyl hydrolases family 18 APS56_RS08915 PF01177 Asp/Glu/Hydantoin racemase APS56_RS08920 PF07969 Amidohydrolase family APS56_RS08935 PF00593 TonB dependent receptor APS56_RS08935 PF07715 TonB-dependent Receptor Plug Domain APS56_RS08950 PF00392 Bacterial regulatory proteins, gntR family APS56_RS08950 PF00155 Aminotransferase class I and II APS56_RS08970 PF01266 FAD dependent oxidoreductase APS56_RS08985 PF01638 HxlR-like helix-turn-helix APS56_RS08995 PF01522 Polysaccharide deacetylase APS56_RS09010 PF01641 SelR domain APS56_RS09015 PF01625 Peptide methionine sulfoxide reductase APS56_RS09025 PF02696 Uncharacterized ACR, YdiU/UPF0061 family APS56_RS09075 PF03062 MBOAT, membrane-bound O-acyltransferase family APS56_RS09090 PF01479 S4 domain APS56_RS09090 PF00849 RNA pseudouridylate synthase APS56_RS09115 PF08453 Peptidase family M9 N-terminal APS56_RS09115 PF18496 Collagenase G catalytic helper subdomain APS56_RS09115 PF01752 Collagenase APS56_RS09130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS56_RS09130 PF00364 Biotin-requiring enzyme APS56_RS09130 PF02817 e3 binding domain APS56_RS09135 PF16078 2-oxoglutarate dehydrogenase N-terminus APS56_RS09135 PF02779 Transketolase, pyrimidine binding domain APS56_RS09135 PF16870 2-oxoglutarate dehydrogenase C-terminal APS56_RS09135 PF00676 Dehydrogenase E1 component APS56_RS09145 PF02082 Transcriptional regulator APS56_RS09155 PF02469 Fasciclin domain APS56_RS09160 PF18793 Nitrous oxide reductase propeller repeat 2 APS56_RS09160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APS56_RS09160 PF18764 Nitrous oxide reductase propeller repeat APS56_RS09185 PF00005 ABC transporter APS56_RS09205 PF00348 Polyprenyl synthetase APS56_RS09210 PF00440 Bacterial regulatory proteins, tetR family APS56_RS09220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS56_RS09220 PF00529 HlyD membrane-fusion protein of T1SS APS56_RS09230 PF00873 AcrB/AcrD/AcrF family APS56_RS09240 PF01336 OB-fold nucleic acid binding domain APS56_RS09240 PF02938 GAD domain APS56_RS09240 PF00152 tRNA synthetases class II (D, K and N) APS56_RS09245 PF00654 Voltage gated chloride channel APS56_RS09260 PF14437 MafB19-like deaminase APS56_RS09265 PF02780 Transketolase, C-terminal domain APS56_RS09265 PF13292 1-deoxy-D-xylulose-5-phosphate synthase APS56_RS09265 PF02779 Transketolase, pyrimidine binding domain APS56_RS09270 PF00106 short chain dehydrogenase APS56_RS09275 PF01966 HD domain APS56_RS09275 PF13286 Phosphohydrolase-associated domain APS56_RS09285 PF00484 Carbonic anhydrase APS56_RS09290 PF01740 STAS domain APS56_RS09290 PF00916 Sulfate permease family APS56_RS09300 PF00593 TonB dependent receptor APS56_RS09300 PF07715 TonB-dependent Receptor Plug Domain APS56_RS09310 PF00593 TonB dependent receptor APS56_RS09310 PF07715 TonB-dependent Receptor Plug Domain APS56_RS09315 PF00436 Single-strand binding protein family APS56_RS09325 PF00478 IMP dehydrogenase / GMP reductase domain APS56_RS09325 PF00571 CBS domain APS56_RS09335 PF00593 TonB dependent receptor APS56_RS09335 PF07715 TonB-dependent Receptor Plug Domain APS56_RS09345 PF06865 Pyrimidine/purine nucleoside phosphorylase APS56_RS09360 PF12833 Helix-turn-helix domain APS56_RS09360 PF01497 Periplasmic binding protein APS56_RS09365 PF12706 Beta-lactamase superfamily domain APS56_RS09370 PF00106 short chain dehydrogenase APS56_RS09375 PF03477 ATP cone domain APS56_RS09375 PF02867 Ribonucleotide reductase, barrel domain APS56_RS09375 PF00317 Ribonucleotide reductase, all-alpha domain APS56_RS09390 PF01914 MarC family integral membrane protein APS56_RS09410 PF13180 PDZ domain APS56_RS09410 PF03572 Peptidase family S41 APS56_RS09430 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS09430 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster APS56_RS09435 PF00310 Glutamine amidotransferases class-II APS56_RS09435 PF01493 GXGXG motif APS56_RS09435 PF01645 Conserved region in glutamate synthase APS56_RS09435 PF04898 Glutamate synthase central domain APS56_RS09445 PF00909 Ammonium Transporter Family APS56_RS09450 PF00543 Nitrogen regulatory protein P-II APS56_RS09455 PF00909 Ammonium Transporter Family APS56_RS09460 PF00543 Nitrogen regulatory protein P-II APS56_RS09465 PF00311 Phosphoenolpyruvate carboxylase APS56_RS09475 PF02445 Quinolinate synthetase A protein APS56_RS09480 PF00890 FAD binding domain APS56_RS09480 PF02910 Fumarate reductase flavoprotein C-term APS56_RS09495 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain APS56_RS09500 PF00583 Acetyltransferase (GNAT) family APS56_RS09500 PF13380 CoA binding domain APS56_RS09500 PF13607 Succinyl-CoA ligase like flavodoxin domain APS56_RS09505 PF00696 Amino acid kinase family APS56_RS09505 PF00742 Homoserine dehydrogenase APS56_RS09505 PF03447 Homoserine dehydrogenase, NAD binding domain APS56_RS09515 PF05656 Protein of unknown function (DUF805) APS56_RS09530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain APS56_RS09530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain APS56_RS09535 PF12833 Helix-turn-helix domain APS56_RS09550 PF03781 Sulfatase-modifying factor enzyme 1 APS56_RS09560 PF00571 CBS domain APS56_RS09560 PF01769 Divalent cation transporter APS56_RS09560 PF03448 MgtE intracellular N domain APS56_RS09565 PF00398 Ribosomal RNA adenine dimethylase APS56_RS09585 PF02403 Seryl-tRNA synthetase N-terminal domain APS56_RS09585 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS56_RS09595 PF06574 FAD synthetase APS56_RS09595 PF01687 Riboflavin kinase APS56_RS09605 PF01195 Peptidyl-tRNA hydrolase APS56_RS09610 PF01386 Ribosomal L25p family APS56_RS09610 PF14693 Ribosomal protein TL5, C-terminal domain APS56_RS09615 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase APS56_RS09615 PF14572 Phosphoribosyl synthetase-associated domain APS56_RS09640 PF07715 TonB-dependent Receptor Plug Domain APS56_RS09640 PF00593 TonB dependent receptor APS56_RS09675 PF16347 Domain of unknown function (DUF4976) APS56_RS09675 PF00884 Sulfatase APS56_RS09685 PF00884 Sulfatase APS56_RS09710 PF16385 Domain of unknown function APS56_RS09710 PF00884 Sulfatase APS56_RS09715 PF16385 Domain of unknown function APS56_RS09715 PF00884 Sulfatase APS56_RS09720 PF00884 Sulfatase APS56_RS09720 PF16385 Domain of unknown function APS56_RS09725 PF00884 Sulfatase APS56_RS09725 PF16385 Domain of unknown function APS56_RS09735 PF16385 Domain of unknown function APS56_RS09735 PF00884 Sulfatase APS56_RS09750 PF13472 GDSL-like Lipase/Acylhydrolase family APS56_RS09750 PF07859 alpha/beta hydrolase fold APS56_RS09755 PF00884 Sulfatase APS56_RS09755 PF16385 Domain of unknown function APS56_RS09765 PF16385 Domain of unknown function APS56_RS09765 PF00884 Sulfatase APS56_RS09780 PF00884 Sulfatase APS56_RS09780 PF16385 Domain of unknown function APS56_RS09785 PF16385 Domain of unknown function APS56_RS09785 PF00884 Sulfatase APS56_RS09810 PF16385 Domain of unknown function APS56_RS09810 PF00884 Sulfatase APS56_RS09815 PF00884 Sulfatase APS56_RS09825 PF00884 Sulfatase APS56_RS09825 PF16385 Domain of unknown function APS56_RS09840 PF00593 TonB dependent receptor APS56_RS09840 PF07715 TonB-dependent Receptor Plug Domain APS56_RS09865 PF00703 Glycosyl hydrolases family 2 APS56_RS09865 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS56_RS09865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APS56_RS09865 PF16355 Domain of unknown function (DUF4982) APS56_RS09895 PF00884 Sulfatase APS56_RS09900 PF00884 Sulfatase APS56_RS09925 PF01676 Metalloenzyme superfamily APS56_RS09925 PF06415 BPG-independent PGAM N-terminus (iPGM_N) APS56_RS09930 PF00884 Sulfatase APS56_RS09935 PF00884 Sulfatase APS56_RS09945 PF07715 TonB-dependent Receptor Plug Domain APS56_RS09945 PF00593 TonB dependent receptor APS56_RS09970 PF14322 Starch-binding associating with outer membrane APS56_RS09970 PF07980 SusD family APS56_RS09975 PF00593 TonB dependent receptor APS56_RS09975 PF07715 TonB-dependent Receptor Plug Domain APS56_RS09980 PF07470 Glycosyl Hydrolase Family 88 APS56_RS09985 PF07494 Two component regulator propeller APS56_RS09985 PF00072 Response regulator receiver domain APS56_RS09985 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS09985 PF07495 Y_Y_Y domain APS56_RS09985 PF12833 Helix-turn-helix domain APS56_RS09995 PF02080 TrkA-C domain APS56_RS09995 PF03600 Citrate transporter APS56_RS10005 PF00625 Guanylate kinase APS56_RS10010 PF01467 Cytidylyltransferase-like APS56_RS10030 PF11799 impB/mucB/samB family C-terminal domain APS56_RS10030 PF11798 IMS family HHH motif APS56_RS10030 PF13438 Domain of unknown function (DUF4113) APS56_RS10030 PF00817 impB/mucB/samB family APS56_RS10040 PF13443 Cro/C1-type HTH DNA-binding domain APS56_RS10050 PF00072 Response regulator receiver domain APS56_RS10050 PF07494 Two component regulator propeller APS56_RS10050 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS10050 PF12833 Helix-turn-helix domain APS56_RS10050 PF07495 Y_Y_Y domain APS56_RS10050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS10055 PF07859 alpha/beta hydrolase fold APS56_RS10055 PF13472 GDSL-like Lipase/Acylhydrolase family APS56_RS10080 PF07980 SusD family APS56_RS10080 PF14322 Starch-binding associating with outer membrane APS56_RS10085 PF07715 TonB-dependent Receptor Plug Domain APS56_RS10085 PF00593 TonB dependent receptor APS56_RS10095 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS10100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS10100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS56_RS10105 PF16347 Domain of unknown function (DUF4976) APS56_RS10105 PF00884 Sulfatase APS56_RS10105 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain APS56_RS10105 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain APS56_RS10105 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain APS56_RS10110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus APS56_RS10110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus APS56_RS10120 PF00593 TonB dependent receptor APS56_RS10120 PF07715 TonB-dependent Receptor Plug Domain APS56_RS10125 PF02565 Recombination protein O C terminal APS56_RS10125 PF11967 Recombination protein O N terminal APS56_RS10135 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain APS56_RS10135 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APS56_RS10175 PF17820 PDZ domain APS56_RS10175 PF02163 Peptidase family M50 APS56_RS10180 PF02630 SCO1/SenC APS56_RS10190 PF07670 Nucleoside recognition APS56_RS10190 PF02421 Ferrous iron transport protein B APS56_RS10190 PF07664 Ferrous iron transport protein B C terminus APS56_RS10205 PF00593 TonB dependent receptor APS56_RS10205 PF07715 TonB-dependent Receptor Plug Domain APS56_RS10210 PF01297 Zinc-uptake complex component A periplasmic APS56_RS10215 PF00005 ABC transporter APS56_RS10220 PF00950 ABC 3 transport family APS56_RS10225 PF00950 ABC 3 transport family APS56_RS10230 PF02021 Uncharacterised protein family UPF0102 APS56_RS10245 PF02559 CarD-like/TRCF domain APS56_RS10245 PF00270 DEAD/DEAH box helicase APS56_RS10245 PF00271 Helicase conserved C-terminal domain APS56_RS10245 PF03461 TRCF domain APS56_RS10245 PF17757 UvrB interaction domain APS56_RS10270 PF16921 Tex protein YqgF-like domain APS56_RS10270 PF00575 S1 RNA binding domain APS56_RS10270 PF09371 Tex-like protein N-terminal domain APS56_RS10270 PF17674 HHH domain APS56_RS10275 PF00691 OmpA family APS56_RS10285 PF00210 Ferritin-like domain APS56_RS10290 PF17185 NlpE C-terminal OB domain APS56_RS10290 PF04170 NlpE N-terminal domain APS56_RS10295 PF08264 Anticodon-binding domain of tRNA APS56_RS10295 PF09334 tRNA synthetases class I (M) APS56_RS10295 PF01588 Putative tRNA binding domain APS56_RS10300 PF17676 LD-carboxypeptidase C-terminal domain APS56_RS10300 PF02016 LD-carboxypeptidase N-terminal domain APS56_RS10330 PF00684 DnaJ central domain APS56_RS10330 PF00226 DnaJ domain APS56_RS10330 PF01556 DnaJ C terminal domain APS56_RS10335 PF06491 Disulphide isomerase APS56_RS10355 PF01966 HD domain APS56_RS10405 PF03150 Di-haem cytochrome c peroxidase APS56_RS10405 PF00034 Cytochrome c APS56_RS10425 PF00378 Enoyl-CoA hydratase/isomerase APS56_RS10430 PF00672 HAMP domain APS56_RS10430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS10430 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS10435 PF03653 Uncharacterised protein family (UPF0093) APS56_RS10445 PF00762 Ferrochelatase APS56_RS10460 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain APS56_RS10460 PF01488 Shikimate / quinate 5-dehydrogenase APS56_RS10460 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain APS56_RS10465 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain APS56_RS10465 PF03900 Porphobilinogen deaminase, C-terminal domain APS56_RS10470 PF01208 Uroporphyrinogen decarboxylase (URO-D) APS56_RS10480 PF06965 Na+/H+ antiporter 1 APS56_RS10485 PF01218 Coproporphyrinogen III oxidase APS56_RS10490 PF17757 UvrB interaction domain APS56_RS10490 PF04851 Type III restriction enzyme, res subunit APS56_RS10490 PF02151 UvrB/uvrC motif APS56_RS10490 PF12344 Ultra-violet resistance protein B APS56_RS10490 PF00271 Helicase conserved C-terminal domain APS56_RS10495 PF02810 SEC-C motif APS56_RS10500 PF00490 Delta-aminolevulinic acid dehydratase APS56_RS10505 PF01595 Cyclin M transmembrane N-terminal domain APS56_RS10505 PF00571 CBS domain APS56_RS10510 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS56_RS10510 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain APS56_RS10525 PF00005 ABC transporter APS56_RS10525 PF08352 Oligopeptide/dipeptide transporter, C-terminal region APS56_RS10530 PF01144 Coenzyme A transferase APS56_RS10535 PF01144 Coenzyme A transferase APS56_RS10540 PF00912 Transglycosylase APS56_RS10540 PF00905 Penicillin binding protein transpeptidase domain APS56_RS10545 PF14109 GldH lipoprotein APS56_RS10550 PF04468 PSP1 C-terminal conserved region APS56_RS10560 PF01136 Peptidase family U32 APS56_RS10565 PF17773 UPF0176 acylphosphatase like domain APS56_RS10565 PF12368 Rhodanase C-terminal APS56_RS10565 PF00581 Rhodanese-like domain APS56_RS10570 PF00154 recA bacterial DNA recombination protein APS56_RS10595 PF00579 tRNA synthetases class I (W and Y) APS56_RS10600 PF17782 DprA winged helix domain APS56_RS10600 PF02481 DNA recombination-mediator protein A APS56_RS10620 PF03061 Thioesterase superfamily APS56_RS10640 PF00483 Nucleotidyl transferase APS56_RS10645 PF00692 dUTPase APS56_RS10655 PF00231 ATP synthase APS56_RS10660 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS56_RS10660 PF00306 ATP synthase alpha/beta chain, C terminal domain APS56_RS10660 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS56_RS10665 PF00213 ATP synthase delta (OSCP) subunit APS56_RS10670 PF00430 ATP synthase B/B' CF(0) APS56_RS10675 PF00137 ATP synthase subunit C APS56_RS10680 PF00119 ATP synthase A chain APS56_RS10700 PF00042 Globin APS56_RS10700 PF00970 Oxidoreductase FAD-binding domain APS56_RS10700 PF00175 Oxidoreductase NAD-binding domain APS56_RS10705 PF01075 Glycosyltransferase family 9 (heptosyltransferase) APS56_RS10730 PF02844 Phosphoribosylglycinamide synthetase, N domain APS56_RS10730 PF02843 Phosphoribosylglycinamide synthetase, C domain APS56_RS10730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain APS56_RS10735 PF14535 AMP-binding enzyme C-terminal domain APS56_RS10735 PF00501 AMP-binding enzyme APS56_RS10740 PF00535 Glycosyl transferase family 2 APS56_RS10745 PF02397 Bacterial sugar transferase APS56_RS10750 PF16363 GDP-mannose 4,6 dehydratase APS56_RS10760 PF04055 Radical SAM superfamily APS56_RS10760 PF13186 Iron-sulfur cluster-binding domain APS56_RS10765 PF13439 Glycosyltransferase Family 4 APS56_RS10765 PF00534 Glycosyl transferases group 1 APS56_RS10775 PF05448 Acetyl xylan esterase (AXE1) APS56_RS10785 PF00534 Glycosyl transferases group 1 APS56_RS10785 PF13439 Glycosyltransferase Family 4 APS56_RS10805 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain APS56_RS10805 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain APS56_RS10805 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain APS56_RS10810 PF02350 UDP-N-acetylglucosamine 2-epimerase APS56_RS10815 PF04321 RmlD substrate binding domain APS56_RS10820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase APS56_RS10825 PF00483 Nucleotidyl transferase APS56_RS10830 PF16363 GDP-mannose 4,6 dehydratase APS56_RS10855 PF02416 mttA/Hcf106 family APS56_RS10865 PF01476 LysM domain APS56_RS10865 PF00877 NlpC/P60 family APS56_RS10870 PF00162 Phosphoglycerate kinase APS56_RS10875 PF09115 DNA polymerase III, delta subunit, C terminal APS56_RS10900 PF13932 GidA associated domain APS56_RS10900 PF01134 Glucose inhibited division protein A APS56_RS10905 PF02130 Uncharacterized protein family UPF0054 APS56_RS10915 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS56_RS10930 PF00825 Ribonuclease P APS56_RS10940 PF03572 Peptidase family S41 APS56_RS10940 PF13180 PDZ domain APS56_RS10955 PF13673 Acetyltransferase (GNAT) domain APS56_RS10960 PF01545 Cation efflux family APS56_RS10960 PF16916 Dimerisation domain of Zinc Transporter APS56_RS10965 PF02502 Ribose/Galactose Isomerase APS56_RS10980 PF00773 RNB domain APS56_RS10980 PF08206 Ribonuclease B OB domain APS56_RS10980 PF17876 Cold shock domain APS56_RS10980 PF00575 S1 RNA binding domain APS56_RS10990 PF09308 LuxQ, periplasmic APS56_RS10990 PF00072 Response regulator receiver domain APS56_RS10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS10990 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS10995 PF00158 Sigma-54 interaction domain APS56_RS10995 PF00072 Response regulator receiver domain APS56_RS10995 PF02954 Bacterial regulatory protein, Fis family APS56_RS11015 PF02152 Dihydroneopterin aldolase APS56_RS11020 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain APS56_RS11020 PF00749 tRNA synthetases class I (E and Q), catalytic domain APS56_RS11060 PF00082 Subtilase family APS56_RS11065 PF00753 Metallo-beta-lactamase superfamily APS56_RS11075 PF00999 Sodium/hydrogen exchanger family APS56_RS11075 PF02080 TrkA-C domain APS56_RS11075 PF03471 Transporter associated domain APS56_RS11080 PF12724 Flavodoxin domain APS56_RS11085 PF16338 Domain of unknown function (DUF4968) APS56_RS11085 PF17137 Domain of unknown function (DUF5110) APS56_RS11085 PF13802 Galactose mutarotase-like APS56_RS11085 PF01055 Glycosyl hydrolases family 31 APS56_RS11090 PF00128 Alpha amylase, catalytic domain APS56_RS11090 PF02806 Alpha amylase, C-terminal all-beta domain APS56_RS11090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) APS56_RS11095 PF00483 Nucleotidyl transferase APS56_RS11100 PF00534 Glycosyl transferases group 1 APS56_RS11100 PF08323 Starch synthase catalytic domain APS56_RS11105 PF06421 GTP-binding protein LepA C-terminus APS56_RS11105 PF00679 Elongation factor G C-terminus APS56_RS11105 PF00009 Elongation factor Tu GTP binding domain APS56_RS11105 PF03144 Elongation factor Tu domain 2 APS56_RS11120 PF01207 Dihydrouridine synthase (Dus) APS56_RS11130 PF12704 MacB-like periplasmic core domain APS56_RS11130 PF02687 FtsX-like permease family APS56_RS11135 PF02033 Ribosome-binding factor A APS56_RS11145 PF00232 Glycosyl hydrolase family 1 APS56_RS11165 PF00677 Lumazine binding domain APS56_RS11170 PF04166 Pyridoxal phosphate biosynthetic protein PdxA APS56_RS11180 PF01783 Ribosomal L32p protein family APS56_RS11185 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III APS56_RS11185 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal APS56_RS11190 PF00364 Biotin-requiring enzyme APS56_RS11195 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS56_RS11195 PF02785 Biotin carboxylase C-terminal domain APS56_RS11195 PF00289 Biotin carboxylase, N-terminal domain APS56_RS11200 PF00912 Transglycosylase APS56_RS11225 PF00005 ABC transporter APS56_RS11230 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain APS56_RS11230 PF00326 Prolyl oligopeptidase family APS56_RS11235 PF02225 PA domain APS56_RS11235 PF04389 Peptidase family M28 APS56_RS11240 PF01118 Semialdehyde dehydrogenase, NAD binding domain APS56_RS11240 PF02774 Semialdehyde dehydrogenase, dimerisation domain APS56_RS11245 PF01741 Large-conductance mechanosensitive channel, MscL APS56_RS11250 PF00842 Alanine racemase, C-terminal domain APS56_RS11250 PF01168 Alanine racemase, N-terminal domain APS56_RS11255 PF00265 Thymidine kinase APS56_RS11265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS56_RS11275 PF03167 Uracil DNA glycosylase superfamily APS56_RS11285 PF01368 DHH family APS56_RS11285 PF02272 DHHA1 domain APS56_RS11285 PF17768 RecJ OB domain APS56_RS11285 PF10141 Single-strand DNA-specific exonuclease, C terminal domain APS56_RS11300 PF00149 Calcineurin-like phosphoesterase APS56_RS11310 PF01242 6-pyruvoyl tetrahydropterin synthase APS56_RS11330 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS56_RS11330 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APS56_RS11330 PF00703 Glycosyl hydrolases family 2 APS56_RS11330 PF16353 Domain of unknown function(DUF4981) APS56_RS11330 PF02929 Beta galactosidase small chain APS56_RS11340 PF14322 Starch-binding associating with outer membrane APS56_RS11340 PF07980 SusD family APS56_RS11345 PF07715 TonB-dependent Receptor Plug Domain APS56_RS11345 PF00593 TonB dependent receptor APS56_RS11355 PF07495 Y_Y_Y domain APS56_RS11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS11355 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS11355 PF12833 Helix-turn-helix domain APS56_RS11355 PF07494 Two component regulator propeller APS56_RS11355 PF00072 Response regulator receiver domain APS56_RS11370 PF05736 OprF membrane domain APS56_RS11370 PF00691 OmpA family APS56_RS11375 PF12705 PD-(D/E)XK nuclease superfamily APS56_RS11375 PF00580 UvrD/REP helicase N-terminal domain APS56_RS11375 PF13361 UvrD-like helicase C-terminal domain APS56_RS11380 PF02777 Iron/manganese superoxide dismutases, C-terminal domain APS56_RS11380 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain APS56_RS11385 PF00156 Phosphoribosyl transferase domain APS56_RS11390 PF08543 Phosphomethylpyrimidine kinase APS56_RS11390 PF02581 Thiamine monophosphate synthase APS56_RS11405 PF01693 Caulimovirus viroplasmin APS56_RS11410 PF00551 Formyl transferase APS56_RS11415 PF00550 Phosphopantetheine attachment site APS56_RS11420 PF00109 Beta-ketoacyl synthase, N-terminal domain APS56_RS11420 PF02801 Beta-ketoacyl synthase, C-terminal domain APS56_RS11425 PF14622 Ribonuclease-III-like APS56_RS11425 PF00035 Double-stranded RNA binding motif APS56_RS11435 PF00224 Pyruvate kinase, barrel domain APS56_RS11435 PF02887 Pyruvate kinase, alpha/beta domain APS56_RS11450 PF00817 impB/mucB/samB family APS56_RS11450 PF11799 impB/mucB/samB family C-terminal domain APS56_RS11455 PF01928 CYTH domain APS56_RS11470 PF00912 Transglycosylase APS56_RS11470 PF06832 Penicillin-Binding Protein C-terminus Family APS56_RS11470 PF00905 Penicillin binding protein transpeptidase domain APS56_RS11475 PF00207 Alpha-2-macroglobulin family APS56_RS11475 PF07703 Alpha-2-macroglobulin bait region domain APS56_RS11475 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain APS56_RS11475 PF11974 Bacterial alpha-2-macroglobulin MG3 domain APS56_RS11475 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain APS56_RS11475 PF17962 Bacterial macroglobulin domain 6 APS56_RS11475 PF01835 MG2 domain APS56_RS11480 PF05970 PIF1-like helicase APS56_RS11505 PF07726 ATPase family associated with various cellular activities (AAA) APS56_RS11505 PF17863 AAA lid domain APS56_RS11510 PF01882 Protein of unknown function DUF58 APS56_RS11520 PF13519 von Willebrand factor type A domain APS56_RS11525 PF13519 von Willebrand factor type A domain APS56_RS11525 PF07584 Aerotolerance regulator N-terminal APS56_RS11545 PF00484 Carbonic anhydrase APS56_RS11560 PF00593 TonB dependent receptor APS56_RS11560 PF07715 TonB-dependent Receptor Plug Domain APS56_RS11605 PF01409 tRNA synthetases class II core domain (F) APS56_RS11605 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain APS56_RS11615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS56_RS11615 PF00529 HlyD membrane-fusion protein of T1SS APS56_RS11620 PF00873 AcrB/AcrD/AcrF family APS56_RS11625 PF02321 Outer membrane efflux protein APS56_RS11655 PF16360 GTP-binding GTPase Middle Region APS56_RS11655 PF01926 50S ribosome-binding GTPase APS56_RS11655 PF13167 GTP-binding GTPase N-terminal APS56_RS11660 PF17092 Penicillin-binding protein OB-like domain APS56_RS11660 PF00905 Penicillin binding protein transpeptidase domain APS56_RS11660 PF00912 Transglycosylase APS56_RS11685 PF02631 RecX family APS56_RS11700 PF00593 TonB dependent receptor APS56_RS11700 PF07715 TonB-dependent Receptor Plug Domain APS56_RS11710 PF00248 Aldo/keto reductase family APS56_RS11715 PF13677 Membrane MotB of proton-channel complex MotA/MotB APS56_RS11715 PF00691 OmpA family APS56_RS11720 PF03372 Endonuclease/Exonuclease/phosphatase family APS56_RS11730 PF01483 Proprotein convertase P-domain APS56_RS11730 PF04389 Peptidase family M28 APS56_RS11735 PF13085 2Fe-2S iron-sulfur cluster binding domain APS56_RS11740 PF02910 Fumarate reductase flavoprotein C-term APS56_RS11740 PF00890 FAD binding domain APS56_RS11755 PF00557 Metallopeptidase family M24 APS56_RS11755 PF05195 Aminopeptidase P, N-terminal domain APS56_RS11760 PF00696 Amino acid kinase family APS56_RS11760 PF01842 ACT domain APS56_RS11780 PF02311 AraC-like ligand binding domain APS56_RS11780 PF12833 Helix-turn-helix domain APS56_RS11800 PF00586 AIR synthase related protein, N-terminal domain APS56_RS11800 PF02769 AIR synthase related protein, C-terminal domain APS56_RS11810 PF01521 Iron-sulphur cluster biosynthesis APS56_RS11815 PF01458 Uncharacterized protein family (UPF0051) APS56_RS11825 PF00005 ABC transporter APS56_RS11830 PF01458 Uncharacterized protein family (UPF0051) APS56_RS11835 PF00266 Aminotransferase class-V APS56_RS11840 PF02657 Fe-S metabolism associated domain APS56_RS11845 PF01883 Iron-sulfur cluster assembly protein APS56_RS11850 PF00005 ABC transporter APS56_RS11870 PF10150 Ribonuclease E/G family APS56_RS11870 PF00575 S1 RNA binding domain APS56_RS11875 PF00216 Bacterial DNA-binding protein APS56_RS11880 PF14815 NUDIX domain APS56_RS11880 PF00730 HhH-GPD superfamily base excision DNA repair protein APS56_RS11885 PF00436 Single-strand binding protein family APS56_RS11890 PF03471 Transporter associated domain APS56_RS11890 PF00571 CBS domain APS56_RS11900 PF00403 Heavy-metal-associated domain APS56_RS11910 PF00829 Ribosomal prokaryotic L21 protein APS56_RS11915 PF01016 Ribosomal L27 protein APS56_RS11930 PF02333 Phytase APS56_RS11940 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APS56_RS11940 PF05221 S-adenosyl-L-homocysteine hydrolase APS56_RS11950 PF01884 PcrB family APS56_RS11960 PF00472 RF-1 domain APS56_RS11960 PF03462 PCRF domain APS56_RS11970 PF00717 Peptidase S24-like APS56_RS11975 PF01804 Penicillin amidase APS56_RS12015 PF02311 AraC-like ligand binding domain APS56_RS12015 PF12833 Helix-turn-helix domain APS56_RS12020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain APS56_RS12025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain APS56_RS12025 PF02874 ATP synthase alpha/beta family, beta-barrel domain APS56_RS12035 PF00593 TonB dependent receptor APS56_RS12035 PF07715 TonB-dependent Receptor Plug Domain APS56_RS12040 PF01380 SIS domain APS56_RS12050 PF08323 Starch synthase catalytic domain APS56_RS12050 PF00534 Glycosyl transferases group 1 APS56_RS12055 PF02569 Pantoate-beta-alanine ligase APS56_RS12060 PF02261 Aspartate decarboxylase APS56_RS12075 PF18073 Rubredoxin metal binding domain APS56_RS12090 PF00133 tRNA synthetases class I (I, L, M and V) APS56_RS12090 PF08264 Anticodon-binding domain of tRNA APS56_RS12100 PF01252 Signal peptidase (SPase) II APS56_RS12110 PF01812 5-formyltetrahydrofolate cyclo-ligase family APS56_RS12120 PF08443 RimK-like ATP-grasp domain APS56_RS12120 PF18030 RimK PreATP-grasp domain APS56_RS12125 PF08443 RimK-like ATP-grasp domain APS56_RS12125 PF18030 RimK PreATP-grasp domain APS56_RS12130 PF01541 GIY-YIG catalytic domain APS56_RS12130 PF02151 UvrB/uvrC motif APS56_RS12130 PF08459 UvrC Helix-hairpin-helix N-terminal APS56_RS12135 PF01734 Patatin-like phospholipase APS56_RS12145 PF03301 Tryptophan 2,3-dioxygenase APS56_RS12150 PF08460 Bacterial SH3 domain APS56_RS12150 PF01551 Peptidase family M23 APS56_RS12155 PF00342 Phosphoglucose isomerase APS56_RS12160 PF00593 TonB dependent receptor APS56_RS12175 PF01272 Transcription elongation factor, GreA/GreB, C-term APS56_RS12175 PF03449 Transcription elongation factor, N-terminal APS56_RS12180 PF01230 HIT domain APS56_RS12190 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS12190 PF00989 PAS fold APS56_RS12190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS12200 PF03588 Leucyl/phenylalanyl-tRNA protein transferase APS56_RS12210 PF13673 Acetyltransferase (GNAT) domain APS56_RS12210 PF00958 GMP synthase C terminal domain APS56_RS12210 PF00117 Glutamine amidotransferase class-I APS56_RS12210 PF03352 Methyladenine glycosylase APS56_RS12210 PF13302 Acetyltransferase (GNAT) domain APS56_RS12225 PF01509 TruB family pseudouridylate synthase (N terminal domain) APS56_RS12230 PF02673 Bacitracin resistance protein BacA APS56_RS12235 PF02595 Glycerate kinase family APS56_RS12245 PF18075 FtsX extracellular domain APS56_RS12250 PF00892 EamA-like transporter family APS56_RS12255 PF13603 Leucyl-tRNA synthetase, Domain 2 APS56_RS12255 PF09334 tRNA synthetases class I (M) APS56_RS12255 PF08264 Anticodon-binding domain of tRNA APS56_RS12260 PF04193 PQ loop repeat APS56_RS12265 PF01262 Alanine dehydrogenase/PNT, C-terminal domain APS56_RS12265 PF05222 Alanine dehydrogenase/PNT, N-terminal domain APS56_RS12275 PF05190 MutS family domain IV APS56_RS12275 PF00488 MutS domain V APS56_RS12275 PF05192 MutS domain III APS56_RS12275 PF05188 MutS domain II APS56_RS12275 PF01624 MutS domain I APS56_RS12290 PF00795 Carbon-nitrogen hydrolase APS56_RS12305 PF03129 Anticodon binding domain APS56_RS12310 PF13404 AsnC-type helix-turn-helix domain APS56_RS12310 PF01037 Lrp/AsnC ligand binding domain APS56_RS12315 PF04241 Protein of unknown function (DUF423) APS56_RS12330 PF00535 Glycosyl transferase family 2 APS56_RS12335 PF01979 Amidohydrolase family APS56_RS12350 PF00579 tRNA synthetases class I (W and Y) APS56_RS12365 PF03480 Bacterial extracellular solute-binding protein, family 7 APS56_RS12375 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component APS56_RS12385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS56_RS12385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS56_RS12390 PF01261 Xylose isomerase-like TIM barrel APS56_RS12395 PF00083 Sugar (and other) transporter APS56_RS12405 PF00486 Transcriptional regulatory protein, C terminal APS56_RS12405 PF00072 Response regulator receiver domain APS56_RS12410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS12410 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS12410 PF00989 PAS fold APS56_RS12410 PF16736 Single Cache-like APS56_RS12420 PF02390 Putative methyltransferase APS56_RS12430 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain APS56_RS12435 PF00291 Pyridoxal-phosphate dependent enzyme APS56_RS12440 PF01883 Iron-sulfur cluster assembly protein APS56_RS12440 PF10609 NUBPL iron-transfer P-loop NTPase APS56_RS12445 PF01106 NifU-like domain APS56_RS12445 PF01521 Iron-sulphur cluster biosynthesis APS56_RS12455 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain APS56_RS12455 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg APS56_RS12455 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II APS56_RS12455 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase APS56_RS12455 PF10371 Domain of unknown function APS56_RS12460 PF00037 4Fe-4S binding domain APS56_RS12465 PF02508 Rnf-Nqr subunit, membrane protein APS56_RS12470 PF02508 Rnf-Nqr subunit, membrane protein APS56_RS12475 PF04205 FMN-binding domain APS56_RS12480 PF03116 NQR2, RnfD, RnfE family APS56_RS12485 PF13237 4Fe-4S dicluster domain APS56_RS12485 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit APS56_RS12485 PF10531 SLBB domain APS56_RS12485 PF13375 RnfC Barrel sandwich hybrid domain APS56_RS12490 PF04060 Putative Fe-S cluster APS56_RS12490 PF00037 4Fe-4S binding domain APS56_RS12490 PF13187 4Fe-4S dicluster domain APS56_RS12500 PF00111 2Fe-2S iron-sulfur cluster binding domain APS56_RS12525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS56_RS12525 PF02770 Acyl-CoA dehydrogenase, middle domain APS56_RS12525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS56_RS12530 PF05175 Methyltransferase small domain APS56_RS12540 PF01782 RimM N-terminal domain APS56_RS12545 PF00886 Ribosomal protein S16 APS56_RS12550 PF10282 Lactonase, 7-bladed beta-propeller APS56_RS12555 PF17657 Bacterial DNA polymerase III alpha subunit finger domain APS56_RS12555 PF14579 Helix-hairpin-helix motif APS56_RS12555 PF02811 PHP domain APS56_RS12555 PF01336 OB-fold nucleic acid binding domain APS56_RS12555 PF07733 Bacterial DNA polymerase III alpha NTPase domain APS56_RS12570 PF04397 LytTr DNA-binding domain APS56_RS12570 PF00072 Response regulator receiver domain APS56_RS12575 PF07694 5TMR of 5TMR-LYT APS56_RS12575 PF06580 Histidine kinase APS56_RS12575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS12585 PF00005 ABC transporter APS56_RS12585 PF02687 FtsX-like permease family APS56_RS12585 PF12704 MacB-like periplasmic core domain APS56_RS12590 PF00005 ABC transporter APS56_RS12595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS56_RS12600 PF02321 Outer membrane efflux protein APS56_RS12605 PF00085 Thioredoxin APS56_RS12610 PF00574 Clp protease APS56_RS12625 PF02614 Glucuronate isomerase APS56_RS12630 PF01232 Mannitol dehydrogenase Rossmann domain APS56_RS12630 PF08125 Mannitol dehydrogenase C-terminal domain APS56_RS12635 PF08666 SAF domain APS56_RS12635 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus APS56_RS12640 PF00356 Bacterial regulatory proteins, lacI family APS56_RS12650 PF13472 GDSL-like Lipase/Acylhydrolase family APS56_RS12655 PF07470 Glycosyl Hydrolase Family 88 APS56_RS12660 PF00295 Glycosyl hydrolases family 28 APS56_RS12680 PF00665 Integrase core domain APS56_RS12680 PF13333 Integrase core domain APS56_RS12680 PF13276 HTH-like domain APS56_RS12695 PF13472 GDSL-like Lipase/Acylhydrolase family APS56_RS12695 PF07859 alpha/beta hydrolase fold APS56_RS12710 PF07980 SusD family APS56_RS12710 PF14322 Starch-binding associating with outer membrane APS56_RS12715 PF07715 TonB-dependent Receptor Plug Domain APS56_RS12715 PF00593 TonB dependent receptor APS56_RS12720 PF13472 GDSL-like Lipase/Acylhydrolase family APS56_RS12735 PF01636 Phosphotransferase enzyme family APS56_RS12740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS12740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS56_RS12745 PF00356 Bacterial regulatory proteins, lacI family APS56_RS12750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS12750 PF07730 Histidine kinase APS56_RS12750 PF00672 HAMP domain APS56_RS12755 PF00196 Bacterial regulatory proteins, luxR family APS56_RS12755 PF00072 Response regulator receiver domain APS56_RS12760 PF04306 Protein of unknown function (DUF456) APS56_RS12770 PF00535 Glycosyl transferase family 2 APS56_RS12785 PF02075 Crossover junction endodeoxyribonuclease RuvC APS56_RS12790 PF04055 Radical SAM superfamily APS56_RS12790 PF06969 HemN C-terminal domain APS56_RS12795 PF04199 Putative cyclase APS56_RS12805 PF04237 YjbR APS56_RS12815 PF03831 PhnA domain APS56_RS12815 PF08274 PhnA Zinc-Ribbon APS56_RS12820 PF00171 Aldehyde dehydrogenase family APS56_RS12830 PF00892 EamA-like transporter family APS56_RS12835 PF01546 Peptidase family M20/M25/M40 APS56_RS12835 PF07687 Peptidase dimerisation domain APS56_RS12850 PF07715 TonB-dependent Receptor Plug Domain APS56_RS12850 PF00593 TonB dependent receptor APS56_RS12870 PF00245 Alkaline phosphatase APS56_RS12875 PF00582 Universal stress protein family APS56_RS12880 PF02576 RimP N-terminal domain APS56_RS12885 PF13184 NusA-like KH domain APS56_RS12885 PF08529 NusA N-terminal domain APS56_RS12890 PF00009 Elongation factor Tu GTP binding domain APS56_RS12890 PF11987 Translation-initiation factor 2 APS56_RS12890 PF04760 Translation initiation factor IF-2, N-terminal region APS56_RS12900 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS56_RS12905 PF13247 4Fe-4S dicluster domain APS56_RS12905 PF00037 4Fe-4S binding domain APS56_RS12930 PF06481 COX Aromatic Rich Motif APS56_RS12930 PF00116 Cytochrome C oxidase subunit II, periplasmic domain APS56_RS12935 PF00115 Cytochrome C and Quinol oxidase polypeptide I APS56_RS12950 PF00691 OmpA family APS56_RS12955 PF05491 RuvB C-terminal winged helix domain APS56_RS12955 PF05496 Holliday junction DNA helicase RuvB P-loop domain APS56_RS12955 PF17864 RuvB AAA lid domain APS56_RS12960 PF08331 Domain of unknown function (DUF1730) APS56_RS12970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS12970 PF00989 PAS fold APS56_RS12970 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS12970 PF00672 HAMP domain APS56_RS12975 PF01515 Phosphate acetyl/butaryl transferase APS56_RS12975 PF03949 Malic enzyme, NAD binding domain APS56_RS12975 PF00390 Malic enzyme, N-terminal domain APS56_RS12980 PF07499 RuvA, C-terminal domain APS56_RS12980 PF01330 RuvA N terminal domain APS56_RS12990 PF01597 Glycine cleavage H-protein APS56_RS13015 PF01040 UbiA prenyltransferase family APS56_RS13020 PF00510 Cytochrome c oxidase subunit III APS56_RS13025 PF00510 Cytochrome c oxidase subunit III APS56_RS13040 PF02630 SCO1/SenC APS56_RS13045 PF04238 Protein of unknown function (DUF420) APS56_RS13055 PF00005 ABC transporter APS56_RS13060 PF00005 ABC transporter APS56_RS13060 PF02687 FtsX-like permease family APS56_RS13060 PF12704 MacB-like periplasmic core domain APS56_RS13065 PF12704 MacB-like periplasmic core domain APS56_RS13065 PF00005 ABC transporter APS56_RS13065 PF02687 FtsX-like permease family APS56_RS13070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS56_RS13075 PF02321 Outer membrane efflux protein APS56_RS13080 PF00814 Glycoprotease family APS56_RS13085 PF00924 Mechanosensitive ion channel APS56_RS13085 PF05552 Conserved TM helix APS56_RS13090 PF06993 Protein of unknown function (DUF1304) APS56_RS13095 PF01106 NifU-like domain APS56_RS13105 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS13110 PF01177 Asp/Glu/Hydantoin racemase APS56_RS13125 PF01103 Surface antigen APS56_RS13125 PF07244 Surface antigen variable number repeat APS56_RS13130 PF01255 Putative undecaprenyl diphosphate synthase APS56_RS13140 PF01513 ATP-NAD kinase APS56_RS13150 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ APS56_RS13155 PF00561 alpha/beta hydrolase fold APS56_RS13165 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS56_RS13165 PF05698 Bacterial trigger factor protein (TF) C-terminus APS56_RS13165 PF05697 Bacterial trigger factor protein (TF) APS56_RS13170 PF00574 Clp protease APS56_RS13175 PF10431 C-terminal, D2-small domain, of ClpB protein APS56_RS13175 PF06689 ClpX C4-type zinc finger APS56_RS13175 PF07724 AAA domain (Cdc48 subfamily) APS56_RS13190 PF01165 Ribosomal protein S21 APS56_RS13195 PF04545 Sigma-70, region 4 APS56_RS13195 PF04539 Sigma-70 region 3 APS56_RS13195 PF04542 Sigma-70 region 2 APS56_RS13195 PF00140 Sigma-70 factor, region 1.2 APS56_RS13195 PF03979 Sigma-70 factor, region 1.1 APS56_RS13215 PF01712 Deoxynucleoside kinase APS56_RS13235 PF02080 TrkA-C domain APS56_RS13235 PF00999 Sodium/hydrogen exchanger family APS56_RS13235 PF03471 Transporter associated domain APS56_RS13255 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS56_RS13255 PF00588 SpoU rRNA Methylase family APS56_RS13260 PF05192 MutS domain III APS56_RS13260 PF05188 MutS domain II APS56_RS13260 PF01624 MutS domain I APS56_RS13260 PF00488 MutS domain V APS56_RS13260 PF05190 MutS family domain IV APS56_RS13275 PF00085 Thioredoxin APS56_RS13280 PF10518 TAT (twin-arginine translocation) pathway signal sequence APS56_RS13280 PF00149 Calcineurin-like phosphoesterase APS56_RS13285 PF12282 Signal transduction histidine kinase APS56_RS13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS13285 PF07568 Histidine kinase APS56_RS13295 PF00196 Bacterial regulatory proteins, luxR family APS56_RS13295 PF00072 Response regulator receiver domain APS56_RS13310 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain APS56_RS13310 PF01367 5'-3' exonuclease, C-terminal SAM fold APS56_RS13310 PF01612 3'-5' exonuclease APS56_RS13310 PF00476 DNA polymerase family A APS56_RS13320 PF03447 Homoserine dehydrogenase, NAD binding domain APS56_RS13320 PF01958 Domain of unknown function DUF108 APS56_RS13325 PF08497 Radical SAM N-terminal APS56_RS13325 PF04055 Radical SAM superfamily APS56_RS13325 PF11842 Domain of unknown function (DUF3362) APS56_RS13330 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system APS56_RS13340 PF13333 Integrase core domain APS56_RS13340 PF00665 Integrase core domain APS56_RS13340 PF13276 HTH-like domain APS56_RS13360 PF01638 HxlR-like helix-turn-helix APS56_RS13380 PF13536 Putative multidrug resistance efflux transporter APS56_RS13405 PF02540 NAD synthase APS56_RS13410 PF00072 Response regulator receiver domain APS56_RS13410 PF00196 Bacterial regulatory proteins, luxR family APS56_RS13415 PF10410 DnaB-helicase binding domain of primase APS56_RS13415 PF08275 DNA primase catalytic core, N-terminal domain APS56_RS13415 PF01807 CHC2 zinc finger APS56_RS13420 PF14403 Circularly permuted ATP-grasp type 2 APS56_RS13435 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase APS56_RS13435 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase APS56_RS13440 PF01926 50S ribosome-binding GTPase APS56_RS13440 PF07650 KH domain APS56_RS13450 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal APS56_RS13450 PF01926 50S ribosome-binding GTPase APS56_RS13470 PF04011 LemA family APS56_RS13485 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS56_RS13485 PF02272 DHHA1 domain APS56_RS13485 PF01411 tRNA synthetases class II (A) APS56_RS13510 PF07730 Histidine kinase APS56_RS13510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS13515 PF00072 Response regulator receiver domain APS56_RS13515 PF00196 Bacterial regulatory proteins, luxR family APS56_RS13530 PF01351 Ribonuclease HII APS56_RS13535 PF00593 TonB dependent receptor APS56_RS13535 PF07715 TonB-dependent Receptor Plug Domain APS56_RS13610 PF00291 Pyridoxal-phosphate dependent enzyme APS56_RS13615 PF00877 NlpC/P60 family APS56_RS13615 PF01476 LysM domain APS56_RS13620 PF00202 Aminotransferase class-III APS56_RS13640 PF01336 OB-fold nucleic acid binding domain APS56_RS13640 PF00152 tRNA synthetases class II (D, K and N) APS56_RS13645 PF03099 Biotin/lipoate A/B protein ligase family APS56_RS13665 PF03976 Polyphosphate kinase 2 (PPK2) APS56_RS13670 PF00356 Bacterial regulatory proteins, lacI family APS56_RS13680 PF01636 Phosphotransferase enzyme family APS56_RS13685 PF07690 Major Facilitator Superfamily APS56_RS13690 PF02585 GlcNAc-PI de-N-acetylase APS56_RS13690 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase APS56_RS13700 PF00884 Sulfatase APS56_RS13700 PF16385 Domain of unknown function APS56_RS13705 PF07940 Heparinase II/III-like protein APS56_RS13705 PF16889 Heparinase II/III N-terminus APS56_RS13710 PF07495 Y_Y_Y domain APS56_RS13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS13710 PF00072 Response regulator receiver domain APS56_RS13710 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS13710 PF12833 Helix-turn-helix domain APS56_RS13710 PF07494 Two component regulator propeller APS56_RS13715 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain APS56_RS13715 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain APS56_RS13715 PF02278 Polysaccharide lyase family 8, super-sandwich domain APS56_RS13720 PF00593 TonB dependent receptor APS56_RS13720 PF07715 TonB-dependent Receptor Plug Domain APS56_RS13730 PF00593 TonB dependent receptor APS56_RS13730 PF07715 TonB-dependent Receptor Plug Domain APS56_RS13735 PF14322 Starch-binding associating with outer membrane APS56_RS13735 PF07980 SusD family APS56_RS13745 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain APS56_RS13745 PF02278 Polysaccharide lyase family 8, super-sandwich domain APS56_RS13745 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain APS56_RS13750 PF07470 Glycosyl Hydrolase Family 88 APS56_RS13755 PF16353 Domain of unknown function(DUF4981) APS56_RS13755 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APS56_RS13755 PF02929 Beta galactosidase small chain APS56_RS13755 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS56_RS13755 PF00703 Glycosyl hydrolases family 2 APS56_RS13760 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS56_RS13760 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APS56_RS13760 PF16355 Domain of unknown function (DUF4982) APS56_RS13760 PF00703 Glycosyl hydrolases family 2 APS56_RS13760 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 APS56_RS13765 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS13770 PF00441 Acyl-CoA dehydrogenase, C-terminal domain APS56_RS13770 PF02771 Acyl-CoA dehydrogenase, N-terminal domain APS56_RS13770 PF02770 Acyl-CoA dehydrogenase, middle domain APS56_RS13775 PF03702 Anhydro-N-acetylmuramic acid kinase APS56_RS13785 PF02472 Biopolymer transport protein ExbD/TolR APS56_RS13795 PF02875 Mur ligase family, glutamate ligase domain APS56_RS13795 PF08245 Mur ligase middle domain APS56_RS13805 PF03575 Peptidase family S51 APS56_RS13830 PF00056 lactate/malate dehydrogenase, NAD binding domain APS56_RS13830 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain APS56_RS13840 PF02355 Protein export membrane protein APS56_RS13840 PF07549 SecD/SecF GG Motif APS56_RS13855 PF00132 Bacterial transferase hexapeptide (six repeats) APS56_RS13855 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD APS56_RS13860 PF04002 RadC-like JAB domain APS56_RS13870 PF13419 Haloacid dehalogenase-like hydrolase APS56_RS13890 PF00004 ATPase family associated with various cellular activities (AAA) APS56_RS13890 PF16193 AAA C-terminal domain APS56_RS13890 PF12002 MgsA AAA+ ATPase C terminal APS56_RS13900 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS56_RS13900 PF00588 SpoU rRNA Methylase family APS56_RS13915 PF07715 TonB-dependent Receptor Plug Domain APS56_RS13915 PF00593 TonB dependent receptor APS56_RS13925 PF00164 Ribosomal protein S12/S23 APS56_RS13930 PF00177 Ribosomal protein S7p/S5e APS56_RS13935 PF03144 Elongation factor Tu domain 2 APS56_RS13935 PF03764 Elongation factor G, domain IV APS56_RS13935 PF00679 Elongation factor G C-terminus APS56_RS13935 PF14492 Elongation Factor G, domain II APS56_RS13935 PF00009 Elongation factor Tu GTP binding domain APS56_RS13940 PF00338 Ribosomal protein S10p/S20e APS56_RS13945 PF00297 Ribosomal protein L3 APS56_RS13950 PF00573 Ribosomal protein L4/L1 family APS56_RS13955 PF00276 Ribosomal protein L23 APS56_RS13960 PF03947 Ribosomal Proteins L2, C-terminal domain APS56_RS13960 PF00181 Ribosomal Proteins L2, RNA binding domain APS56_RS13965 PF00203 Ribosomal protein S19 APS56_RS13970 PF00237 Ribosomal protein L22p/L17e APS56_RS13975 PF07650 KH domain APS56_RS13975 PF00189 Ribosomal protein S3, C-terminal domain APS56_RS13980 PF00252 Ribosomal protein L16p/L10e APS56_RS13985 PF00831 Ribosomal L29 protein APS56_RS13990 PF00366 Ribosomal protein S17 APS56_RS13995 PF00238 Ribosomal protein L14p/L23e APS56_RS14000 PF00467 KOW motif APS56_RS14000 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 APS56_RS14005 PF00281 Ribosomal protein L5 APS56_RS14005 PF00673 ribosomal L5P family C-terminus APS56_RS14010 PF00253 Ribosomal protein S14p/S29e APS56_RS14015 PF00410 Ribosomal protein S8 APS56_RS14020 PF00347 Ribosomal protein L6 APS56_RS14025 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast APS56_RS14030 PF00333 Ribosomal protein S5, N-terminal domain APS56_RS14030 PF03719 Ribosomal protein S5, C-terminal domain APS56_RS14035 PF00327 Ribosomal protein L30p/L7e APS56_RS14040 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A APS56_RS14045 PF00344 SecY translocase APS56_RS14050 PF01176 Translation initiation factor 1A / IF-1 APS56_RS14055 PF00416 Ribosomal protein S13/S18 APS56_RS14060 PF00411 Ribosomal protein S11 APS56_RS14065 PF00163 Ribosomal protein S4/S9 N-terminal domain APS56_RS14065 PF01479 S4 domain APS56_RS14070 PF01000 RNA polymerase Rpb3/RpoA insert domain APS56_RS14070 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain APS56_RS14070 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain APS56_RS14075 PF01196 Ribosomal protein L17 APS56_RS14080 PF00117 Glutamine amidotransferase class-I APS56_RS14080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain APS56_RS14085 PF00113 Enolase, C-terminal TIM barrel domain APS56_RS14085 PF03952 Enolase, N-terminal domain APS56_RS14090 PF00285 Citrate synthase, C-terminal domain APS56_RS14105 PF02666 Phosphatidylserine decarboxylase APS56_RS14120 PF00004 ATPase family associated with various cellular activities (AAA) APS56_RS14120 PF01434 Peptidase family M41 APS56_RS14120 PF17862 AAA+ lid domain APS56_RS14130 PF02237 Biotin protein ligase C terminal domain APS56_RS14130 PF03099 Biotin/lipoate A/B protein ligase family APS56_RS14140 PF00156 Phosphoribosyl transferase domain APS56_RS14145 PF00293 NUDIX domain APS56_RS14165 PF00448 SRP54-type protein, GTPase domain APS56_RS14165 PF02881 SRP54-type protein, helical bundle domain APS56_RS14165 PF02978 Signal peptide binding domain APS56_RS14170 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain APS56_RS14170 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain APS56_RS14175 PF00849 RNA pseudouridylate synthase APS56_RS14175 PF01479 S4 domain APS56_RS14185 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 APS56_RS14185 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) APS56_RS14195 PF05872 Bacterial protein of unknown function (DUF853) APS56_RS14200 PF04055 Radical SAM superfamily APS56_RS14230 PF02938 GAD domain APS56_RS14230 PF01336 OB-fold nucleic acid binding domain APS56_RS14230 PF00152 tRNA synthetases class II (D, K and N) APS56_RS14235 PF01425 Amidase APS56_RS14250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS14250 PF00986 DNA gyrase B subunit, carboxyl terminus APS56_RS14250 PF00204 DNA gyrase B APS56_RS14250 PF01751 Toprim domain APS56_RS14255 PF02416 mttA/Hcf106 family APS56_RS14260 PF01596 O-methyltransferase APS56_RS14265 PF06052 3-hydroxyanthranilic acid dioxygenase APS56_RS14275 PF01494 FAD binding domain APS56_RS14280 PF00266 Aminotransferase class-V APS56_RS14285 PF00719 Inorganic pyrophosphatase APS56_RS14290 PF04542 Sigma-70 region 2 APS56_RS14290 PF04545 Sigma-70, region 4 APS56_RS14290 PF03979 Sigma-70 factor, region 1.1 APS56_RS14290 PF04539 Sigma-70 region 3 APS56_RS14290 PF00140 Sigma-70 factor, region 1.2 APS56_RS14300 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain APS56_RS14300 PF01138 3' exoribonuclease family, domain 1 APS56_RS14300 PF00575 S1 RNA binding domain APS56_RS14300 PF03725 3' exoribonuclease family, domain 2 APS56_RS14300 PF00013 KH domain APS56_RS14305 PF00312 Ribosomal protein S15 APS56_RS14315 PF01039 Carboxyl transferase domain APS56_RS14320 PF01116 Fructose-bisphosphate aldolase class-II APS56_RS14330 PF00588 SpoU rRNA Methylase family APS56_RS14330 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS56_RS14340 PF01209 ubiE/COQ5 methyltransferase family APS56_RS14345 PF02254 TrkA-N domain APS56_RS14345 PF02080 TrkA-C domain APS56_RS14350 PF02386 Cation transport protein APS56_RS14355 PF03781 Sulfatase-modifying factor enzyme 1 APS56_RS14380 PF01790 Prolipoprotein diacylglyceryl transferase APS56_RS14385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD APS56_RS14395 PF01368 DHH family APS56_RS14395 PF02272 DHHA1 domain APS56_RS14400 PF00334 Nucleoside diphosphate kinase APS56_RS14405 PF00313 'Cold-shock' DNA-binding domain APS56_RS14410 PF00313 'Cold-shock' DNA-binding domain APS56_RS14425 PF02463 RecF/RecN/SMC N terminal domain APS56_RS14435 PF00885 6,7-dimethyl-8-ribityllumazine synthase APS56_RS14450 PF08676 MutL C terminal dimerisation domain APS56_RS14450 PF01119 DNA mismatch repair protein, C-terminal domain APS56_RS14480 PF10502 Signal peptidase, peptidase S26 APS56_RS14485 PF01113 Dihydrodipicolinate reductase, N-terminus APS56_RS14485 PF05173 Dihydrodipicolinate reductase, C-terminus APS56_RS14495 PF02195 ParB-like nuclease domain APS56_RS14495 PF17762 HTH domain found in ParB protein APS56_RS14500 PF13614 AAA domain APS56_RS14515 PF01814 Hemerythrin HHE cation binding domain APS56_RS14515 PF04405 Domain of Unknown function (DUF542) APS56_RS14530 PF01642 Methylmalonyl-CoA mutase APS56_RS14540 PF00485 Phosphoribulokinase / Uridine kinase family APS56_RS14545 PF00034 Cytochrome c APS56_RS14545 PF13442 Cytochrome C oxidase, cbb3-type, subunit III APS56_RS14550 PF07995 Glucose / Sorbosone dehydrogenase APS56_RS14565 PF12833 Helix-turn-helix domain APS56_RS14565 PF02805 Metal binding domain of Ada APS56_RS14570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS56_RS14575 PF00873 AcrB/AcrD/AcrF family APS56_RS14590 PF00440 Bacterial regulatory proteins, tetR family APS56_RS14605 PF07715 TonB-dependent Receptor Plug Domain APS56_RS14605 PF00593 TonB dependent receptor APS56_RS14610 PF14322 Starch-binding associating with outer membrane APS56_RS14610 PF07980 SusD family APS56_RS14615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS14655 PF18389 TrmO C-terminal domain APS56_RS14655 PF01980 tRNA-methyltransferase O APS56_RS14685 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion APS56_RS14695 PF01625 Peptide methionine sulfoxide reductase APS56_RS14705 PF01784 NIF3 (NGG1p interacting factor 3) APS56_RS14710 PF02606 Tetraacyldisaccharide-1-P 4'-kinase APS56_RS14715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS14715 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS14715 PF09308 LuxQ, periplasmic APS56_RS14715 PF00072 Response regulator receiver domain APS56_RS14720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APS56_RS14720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain APS56_RS14725 PF04055 Radical SAM superfamily APS56_RS14740 PF00535 Glycosyl transferase family 2 APS56_RS14740 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 APS56_RS14750 PF00230 Major intrinsic protein APS56_RS14760 PF04545 Sigma-70, region 4 APS56_RS14760 PF04542 Sigma-70 region 2 APS56_RS14765 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain APS56_RS14765 PF01565 FAD binding domain APS56_RS14770 PF00155 Aminotransferase class I and II APS56_RS14780 PF10458 Valyl tRNA synthetase tRNA binding arm APS56_RS14780 PF00133 tRNA synthetases class I (I, L, M and V) APS56_RS14780 PF08264 Anticodon-binding domain of tRNA APS56_RS14795 PF13276 HTH-like domain APS56_RS14795 PF13333 Integrase core domain APS56_RS14795 PF00665 Integrase core domain APS56_RS14815 PF00072 Response regulator receiver domain APS56_RS14815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS14815 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS14815 PF01627 Hpt domain APS56_RS14815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) APS56_RS14815 PF00672 HAMP domain APS56_RS14820 PF00750 tRNA synthetases class I (R) APS56_RS14820 PF05746 DALR anticodon binding domain APS56_RS14820 PF03485 Arginyl tRNA synthetase N terminal domain APS56_RS14830 PF01740 STAS domain APS56_RS14830 PF00916 Sulfate permease family APS56_RS14835 PF01467 Cytidylyltransferase-like APS56_RS14840 PF01820 D-ala D-ala ligase N-terminus APS56_RS14840 PF07478 D-ala D-ala ligase C-terminus APS56_RS14850 PF01479 S4 domain APS56_RS14850 PF00849 RNA pseudouridylate synthase APS56_RS14860 PF13460 NAD(P)H-binding APS56_RS14860 PF11066 Protein of unknown function (DUF2867) APS56_RS14865 PF03883 Peroxide stress protein YaaA APS56_RS14885 PF07715 TonB-dependent Receptor Plug Domain APS56_RS14885 PF00593 TonB dependent receptor APS56_RS14885 PF07660 Secretin and TonB N terminus short domain APS56_RS14890 PF00270 DEAD/DEAH box helicase APS56_RS14890 PF00271 Helicase conserved C-terminal domain APS56_RS14900 PF09905 DNA-binding protein VF530 APS56_RS14910 PF00588 SpoU rRNA Methylase family APS56_RS14915 PF00795 Carbon-nitrogen hydrolase APS56_RS14915 PF00583 Acetyltransferase (GNAT) family APS56_RS14920 PF05656 Protein of unknown function (DUF805) APS56_RS14925 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS14930 PF00290 Tryptophan synthase alpha chain APS56_RS14935 PF00291 Pyridoxal-phosphate dependent enzyme APS56_RS14940 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase APS56_RS14945 PF00218 Indole-3-glycerol phosphate synthase APS56_RS14950 PF00591 Glycosyl transferase family, a/b domain APS56_RS14950 PF02885 Glycosyl transferase family, helical bundle domain APS56_RS14955 PF00117 Glutamine amidotransferase class-I APS56_RS14960 PF00425 chorismate binding enzyme APS56_RS14960 PF04715 Anthranilate synthase component I, N terminal region APS56_RS14970 PF00581 Rhodanese-like domain APS56_RS14985 PF03786 D-mannonate dehydratase (UxuA) APS56_RS14990 PF00106 short chain dehydrogenase APS56_RS15005 PF07992 Pyridine nucleotide-disulphide oxidoreductase APS56_RS15025 PF00245 Alkaline phosphatase APS56_RS15040 PF16347 Domain of unknown function (DUF4976) APS56_RS15040 PF00884 Sulfatase APS56_RS15045 PF00171 Aldehyde dehydrogenase family APS56_RS15050 PF12833 Helix-turn-helix domain APS56_RS15050 PF02311 AraC-like ligand binding domain APS56_RS15055 PF00596 Class II Aldolase and Adducin N-terminal domain APS56_RS15060 PF02952 L-fucose isomerase, C-terminal domain APS56_RS15060 PF07881 L-fucose isomerase, first N-terminal domain APS56_RS15060 PF07882 L-fucose isomerase, second N-terminal domain APS56_RS15065 PF02782 FGGY family of carbohydrate kinases, C-terminal domain APS56_RS15065 PF00370 FGGY family of carbohydrate kinases, N-terminal domain APS56_RS15075 PF14592 Chondroitinase B APS56_RS15085 PF07940 Heparinase II/III-like protein APS56_RS15085 PF05426 Alginate lyase APS56_RS15100 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain APS56_RS15100 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase APS56_RS15105 PF01566 Natural resistance-associated macrophage protein APS56_RS15115 PF13378 Enolase C-terminal domain-like APS56_RS15115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain APS56_RS15120 PF07715 TonB-dependent Receptor Plug Domain APS56_RS15120 PF00593 TonB dependent receptor APS56_RS15125 PF07980 SusD family APS56_RS15125 PF14322 Starch-binding associating with outer membrane APS56_RS15130 PF00106 short chain dehydrogenase APS56_RS15145 PF00474 Sodium:solute symporter family APS56_RS15150 PF00593 TonB dependent receptor APS56_RS15150 PF07715 TonB-dependent Receptor Plug Domain APS56_RS15155 PF07980 SusD family APS56_RS15155 PF14322 Starch-binding associating with outer membrane APS56_RS15165 PF00392 Bacterial regulatory proteins, gntR family APS56_RS15165 PF07729 FCD domain APS56_RS15170 PF07690 Major Facilitator Superfamily APS56_RS15175 PF00106 short chain dehydrogenase APS56_RS15190 PF04542 Sigma-70 region 2 APS56_RS15190 PF08281 Sigma-70, region 4 APS56_RS15195 PF00005 ABC transporter APS56_RS15195 PF00664 ABC transporter transmembrane region APS56_RS15200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I APS56_RS15200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III APS56_RS15200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II APS56_RS15200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain APS56_RS15205 PF00535 Glycosyl transferase family 2 APS56_RS15215 PF01197 Ribosomal protein L31 APS56_RS15230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle APS56_RS15235 PF04055 Radical SAM superfamily APS56_RS15235 PF01938 TRAM domain APS56_RS15235 PF00919 Uncharacterized protein family UPF0004 APS56_RS15265 PF00468 Ribosomal protein L34 APS56_RS15270 PF02142 MGS-like domain APS56_RS15270 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APS56_RS15270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain APS56_RS15275 PF03061 Thioesterase superfamily APS56_RS15295 PF02646 RmuC family APS56_RS15300 PF00005 ABC transporter APS56_RS15305 PF01032 FecCD transport family APS56_RS15340 PF08281 Sigma-70, region 4 APS56_RS15340 PF04542 Sigma-70 region 2 APS56_RS15355 PF00206 Lyase APS56_RS15355 PF08328 Adenylosuccinate lyase C-terminal APS56_RS15375 PF01556 DnaJ C terminal domain APS56_RS15375 PF00226 DnaJ domain APS56_RS15380 PF16326 ABC transporter C-terminal domain APS56_RS15380 PF12848 ABC transporter APS56_RS15380 PF00005 ABC transporter APS56_RS15385 PF03358 NADPH-dependent FMN reductase APS56_RS15385 PF01566 Natural resistance-associated macrophage protein APS56_RS15390 PF10017 Histidine-specific methyltransferase, SAM-dependent APS56_RS15395 PF03781 Sulfatase-modifying factor enzyme 1 APS56_RS15395 PF12867 DinB superfamily APS56_RS15400 PF00171 Aldehyde dehydrogenase family APS56_RS15405 PF02146 Sir2 family APS56_RS15410 PF00588 SpoU rRNA Methylase family APS56_RS15420 PF00270 DEAD/DEAH box helicase APS56_RS15420 PF00271 Helicase conserved C-terminal domain APS56_RS15430 PF01435 Peptidase family M48 APS56_RS15430 PF16491 CAAX prenyl protease N-terminal, five membrane helices APS56_RS15435 PF00588 SpoU rRNA Methylase family APS56_RS15435 PF08032 RNA 2'-O ribose methyltransferase substrate binding APS56_RS15455 PF01979 Amidohydrolase family APS56_RS15465 PF07687 Peptidase dimerisation domain APS56_RS15465 PF01546 Peptidase family M20/M25/M40 APS56_RS15475 PF13593 SBF-like CPA transporter family (DUF4137) APS56_RS15480 PF09190 DALR domain APS56_RS15480 PF01406 tRNA synthetases class I (C) catalytic domain APS56_RS15485 PF01227 GTP cyclohydrolase I APS56_RS15500 PF09180 Prolyl-tRNA synthetase, C-terminal APS56_RS15500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) APS56_RS15500 PF03129 Anticodon binding domain APS56_RS15510 PF01649 Ribosomal protein S20 APS56_RS15525 PF07495 Y_Y_Y domain APS56_RS15525 PF00072 Response regulator receiver domain APS56_RS15525 PF07494 Two component regulator propeller APS56_RS15525 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS15525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS15525 PF12833 Helix-turn-helix domain APS56_RS15530 PF16385 Domain of unknown function APS56_RS15530 PF00884 Sulfatase APS56_RS15540 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS56_RS15540 PF16353 Domain of unknown function(DUF4981) APS56_RS15540 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APS56_RS15540 PF00703 Glycosyl hydrolases family 2 APS56_RS15540 PF02929 Beta galactosidase small chain APS56_RS15545 PF02837 Glycosyl hydrolases family 2, sugar binding domain APS56_RS15545 PF02836 Glycosyl hydrolases family 2, TIM barrel domain APS56_RS15545 PF00703 Glycosyl hydrolases family 2 APS56_RS15545 PF13287 Fn3 associated APS56_RS15545 PF16355 Domain of unknown function (DUF4982) APS56_RS15550 PF07715 TonB-dependent Receptor Plug Domain APS56_RS15550 PF00593 TonB dependent receptor APS56_RS15560 PF07715 TonB-dependent Receptor Plug Domain APS56_RS15560 PF00593 TonB dependent receptor APS56_RS15565 PF07980 SusD family APS56_RS15565 PF14322 Starch-binding associating with outer membrane APS56_RS15575 PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain APS56_RS15575 PF00884 Sulfatase APS56_RS15575 PF16347 Domain of unknown function (DUF4976) APS56_RS15575 PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain APS56_RS15575 PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain APS56_RS15595 PF00593 TonB dependent receptor APS56_RS15595 PF07715 TonB-dependent Receptor Plug Domain APS56_RS15600 PF07980 SusD family APS56_RS15600 PF14322 Starch-binding associating with outer membrane APS56_RS15610 PF00072 Response regulator receiver domain APS56_RS15620 PF00360 Phytochrome region APS56_RS15620 PF08446 PAS fold APS56_RS15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS15620 PF01590 GAF domain APS56_RS15620 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS15630 PF00360 Phytochrome region APS56_RS15630 PF08446 PAS fold APS56_RS15630 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS15630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS15630 PF01590 GAF domain APS56_RS15640 PF00072 Response regulator receiver domain APS56_RS15640 PF04397 LytTr DNA-binding domain APS56_RS15705 PF00486 Transcriptional regulatory protein, C terminal APS56_RS15705 PF00072 Response regulator receiver domain APS56_RS15720 PF00593 TonB dependent receptor APS56_RS15720 PF07715 TonB-dependent Receptor Plug Domain APS56_RS15750 PF00005 ABC transporter APS56_RS15760 PF00675 Insulinase (Peptidase family M16) APS56_RS15760 PF05193 Peptidase M16 inactive domain APS56_RS15775 PF07715 TonB-dependent Receptor Plug Domain APS56_RS15775 PF00593 TonB dependent receptor APS56_RS15780 PF14322 Starch-binding associating with outer membrane APS56_RS15780 PF07980 SusD family APS56_RS15815 PF01063 Amino-transferase class IV APS56_RS15820 PF02622 Uncharacterized ACR, COG1678 APS56_RS15825 PF00216 Bacterial DNA-binding protein APS56_RS15830 PF00551 Formyl transferase APS56_RS15830 PF02911 Formyl transferase, C-terminal domain APS56_RS15835 PF00270 DEAD/DEAH box helicase APS56_RS15835 PF00271 Helicase conserved C-terminal domain APS56_RS15855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) APS56_RS15860 PF00875 DNA photolyase APS56_RS15860 PF03441 FAD binding domain of DNA photolyase APS56_RS15890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain APS56_RS15890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold APS56_RS15910 PF00248 Aldo/keto reductase family APS56_RS15915 PF01979 Amidohydrolase family APS56_RS15925 PF00072 Response regulator receiver domain APS56_RS15925 PF04397 LytTr DNA-binding domain APS56_RS15930 PF07694 5TMR of 5TMR-LYT APS56_RS15930 PF06580 Histidine kinase APS56_RS15930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS15990 PF00665 Integrase core domain APS56_RS15990 PF13276 HTH-like domain APS56_RS15990 PF13333 Integrase core domain APS56_RS16065 PF02463 RecF/RecN/SMC N terminal domain APS56_RS16080 PF01544 CorA-like Mg2+ transporter protein APS56_RS16095 PF02545 Maf-like protein APS56_RS16120 PF05140 ResB-like family APS56_RS16120 PF01578 Cytochrome C assembly protein APS56_RS16125 PF01741 Large-conductance mechanosensitive channel, MscL APS56_RS16135 PF00206 Lyase APS56_RS16135 PF10415 Fumarase C C-terminus APS56_RS16140 PF00578 AhpC/TSA family APS56_RS16140 PF10417 C-terminal domain of 1-Cys peroxiredoxin APS56_RS16150 PF00593 TonB dependent receptor APS56_RS16150 PF07715 TonB-dependent Receptor Plug Domain APS56_RS16155 PF03960 ArsC family APS56_RS16165 PF03462 PCRF domain APS56_RS16165 PF00472 RF-1 domain APS56_RS16175 PF02575 YbaB/EbfC DNA-binding family APS56_RS16180 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain APS56_RS16180 PF00326 Prolyl oligopeptidase family APS56_RS16185 PF00291 Pyridoxal-phosphate dependent enzyme APS56_RS16185 PF00571 CBS domain APS56_RS16190 PF00155 Aminotransferase class I and II APS56_RS16225 PF00012 Hsp70 protein APS56_RS16240 PF17785 PUA-like domain APS56_RS16240 PF10672 S-adenosylmethionine-dependent methyltransferase APS56_RS16250 PF03060 Nitronate monooxygenase APS56_RS16265 PF00595 PDZ domain APS56_RS16270 PF01678 Diaminopimelate epimerase APS56_RS16280 PF02618 YceG-like family APS56_RS16295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases APS56_RS16300 PF01451 Low molecular weight phosphotyrosine protein phosphatase APS56_RS16305 PF08299 Bacterial dnaA protein helix-turn-helix APS56_RS16305 PF11638 DnaA N-terminal domain APS56_RS16305 PF00308 Bacterial dnaA protein APS56_RS16310 PF03061 Thioesterase superfamily APS56_RS16315 PF01205 Uncharacterized protein family UPF0029 APS56_RS16315 PF09186 Domain of unknown function (DUF1949) APS56_RS16325 PF01872 RibD C-terminal domain APS56_RS16325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region APS56_RS16335 PF05175 Methyltransferase small domain APS56_RS16335 PF17827 PrmC N-terminal domain APS56_RS16340 PF12826 Helix-hairpin-helix motif APS56_RS16340 PF01653 NAD-dependent DNA ligase adenylation domain APS56_RS16340 PF03120 NAD-dependent DNA ligase OB-fold domain APS56_RS16340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain APS56_RS16340 PF00533 BRCA1 C Terminus (BRCT) domain APS56_RS16355 PF00149 Calcineurin-like phosphoesterase APS56_RS16355 PF02872 5'-nucleotidase, C-terminal domain APS56_RS16370 PF00701 Dihydrodipicolinate synthetase family APS56_RS16385 PF04127 DNA / pantothenate metabolism flavoprotein APS56_RS16385 PF02441 Flavoprotein APS56_RS16395 PF02463 RecF/RecN/SMC N terminal domain APS56_RS16405 PF00535 Glycosyl transferase family 2 APS56_RS16415 PF01121 Dephospho-CoA kinase APS56_RS16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase APS56_RS16420 PF00512 His Kinase A (phospho-acceptor) domain APS56_RS16425 PF00486 Transcriptional regulatory protein, C terminal APS56_RS16425 PF00072 Response regulator receiver domain APS56_RS16435 PF01638 HxlR-like helix-turn-helix APS56_RS16485 PF01979 Amidohydrolase family APS56_RS16495 PF00535 Glycosyl transferase family 2 APS56_RS16515 PF00474 Sodium:solute symporter family APS56_RS16520 PF02132 RecR protein APS56_RS16520 PF13662 Toprim domain APS56_RS16530 PF02817 e3 binding domain APS56_RS16530 PF00364 Biotin-requiring enzyme APS56_RS16530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) APS56_RS16535 PF00929 Exonuclease APS56_RS16540 PF01557 Fumarylacetoacetate (FAA) hydrolase family APS56_RS16550 PF18146 Damage-inducible protein CinA KH domain APS56_RS16550 PF00994 Probable molybdopterin binding domain APS56_RS16550 PF02464 Competence-damaged protein APS56_RS16555 PF00830 Ribosomal L28 family APS56_RS16560 PF00471 Ribosomal protein L33 APS56_RS16565 PF02881 SRP54-type protein, helical bundle domain APS56_RS16565 PF00448 SRP54-type protein, GTPase domain APS56_RS16575 PF04055 Radical SAM superfamily APS56_RS16575 PF18693 TRAM domain APS56_RS16575 PF00919 Uncharacterized protein family UPF0004 APS56_RS16600 PF09312 SurA N-terminal domain APS56_RS16605 PF07726 ATPase family associated with various cellular activities (AAA) APS56_RS16605 PF17863 AAA lid domain APS56_RS16610 PF06434 Aconitate hydratase 2 N-terminus APS56_RS16610 PF11791 Aconitate B N-terminal domain APS56_RS16610 PF00330 Aconitase family (aconitate hydratase) APS56_RS16615 PF00694 Aconitase C-terminal domain APS56_RS16615 PF00330 Aconitase family (aconitate hydratase) APS56_RS16620 PF01820 D-ala D-ala ligase N-terminus APS56_RS16620 PF07478 D-ala D-ala ligase C-terminus APS56_RS16625 PF00453 Ribosomal protein L20 APS56_RS16630 PF01632 Ribosomal protein L35 APS56_RS16635 PF05198 Translation initiation factor IF-3, N-terminal domain APS56_RS16635 PF00707 Translation initiation factor IF-3, C-terminal domain APS56_RS16640 PF02824 TGS domain APS56_RS16640 PF03129 Anticodon binding domain APS56_RS16640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain APS56_RS16640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T)