APS56_RS00070	PWY-5913	TCA cycle VI (obligate autotrophs)
APS56_RS00070	PWY-6549	L-glutamine biosynthesis III
APS56_RS00070	PWY-6728	methylaspartate cycle
APS56_RS00070	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APS56_RS00070	PWY-7124	ethylene biosynthesis V (engineered)
APS56_RS00070	PWY-7254	TCA cycle VII (acetate-producers)
APS56_RS00070	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APS56_RS00175	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APS56_RS00180	PWY-5839	menaquinol-7 biosynthesis
APS56_RS00180	PWY-5851	demethylmenaquinol-9 biosynthesis
APS56_RS00180	PWY-5852	demethylmenaquinol-8 biosynthesis I
APS56_RS00180	PWY-5853	demethylmenaquinol-6 biosynthesis I
APS56_RS00180	PWY-5890	menaquinol-10 biosynthesis
APS56_RS00180	PWY-5891	menaquinol-11 biosynthesis
APS56_RS00180	PWY-5892	menaquinol-12 biosynthesis
APS56_RS00180	PWY-5895	menaquinol-13 biosynthesis
APS56_RS00190	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS00190	PWY-1622	formaldehyde assimilation I (serine pathway)
APS56_RS00190	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APS56_RS00190	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS00190	PWY-5723	Rubisco shunt
APS56_RS00190	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APS56_RS00190	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS00190	PWY-6886	1-butanol autotrophic biosynthesis
APS56_RS00190	PWY-6901	superpathway of glucose and xylose degradation
APS56_RS00190	PWY-7003	glycerol degradation to butanol
APS56_RS00190	PWY-7124	ethylene biosynthesis V (engineered)
APS56_RS00190	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APS56_RS00295	PWY-6825	phosphatidylcholine biosynthesis V
APS56_RS00325	PWY-3341	L-proline biosynthesis III
APS56_RS00325	PWY-4981	L-proline biosynthesis II (from arginine)
APS56_RS00325	PWY-6344	L-ornithine degradation II (Stickland reaction)
APS56_RS00325	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APS56_RS00500	PWY-6123	inosine-5'-phosphate biosynthesis I
APS56_RS00500	PWY-6124	inosine-5'-phosphate biosynthesis II
APS56_RS00500	PWY-7234	inosine-5'-phosphate biosynthesis III
APS56_RS00520	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
APS56_RS00520	PWY-7248	pectin degradation III
APS56_RS00525	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APS56_RS00525	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
APS56_RS00525	PWY-7242	D-fructuronate degradation
APS56_RS00525	PWY-7310	D-glucosaminate degradation
APS56_RS00525	PWY-7562	3,6-anhydro-&alpha;-L-galactopyranose degradation
APS56_RS00545	PWY-6507	4-deoxy-L-<i>threo</i>-hex-4-enopyranuronate degradation
APS56_RS00560	PWY-3861	mannitol degradation II
APS56_RS00560	PWY-3881	mannitol biosynthesis
APS56_RS00560	PWY-5659	GDP-mannose biosynthesis
APS56_RS00560	PWY-6992	1,5-anhydrofructose degradation
APS56_RS00560	PWY-7456	mannan degradation
APS56_RS00560	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
APS56_RS00560	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
APS56_RS00565	PWY-6891	thiazole biosynthesis II (Bacillus)
APS56_RS00565	PWY-6892	thiazole biosynthesis I (E. coli)
APS56_RS00565	PWY-7560	methylerythritol phosphate pathway II
APS56_RS00570	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APS56_RS00570	PWY-5723	Rubisco shunt
APS56_RS00580	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
APS56_RS00580	PWY-5491	diethylphosphate degradation
APS56_RS00700	PWY-7723	APS56_RS00700
APS56_RS00710	PWY-6898	thiamin salvage III
APS56_RS00710	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
APS56_RS00710	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
APS56_RS00710	PWY-7356	thiamin salvage IV (yeast)
APS56_RS00755	PWY-4621	arsenate detoxification II (glutaredoxin)
APS56_RS00760	PWY-2781	<i>cis</i>-zeatin biosynthesis
APS56_RS00785	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APS56_RS00790	PWY-1361	benzoyl-CoA degradation I (aerobic)
APS56_RS00790	PWY-5109	2-methylbutanoate biosynthesis
APS56_RS00790	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
APS56_RS00790	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
APS56_RS00790	PWY-5177	glutaryl-CoA degradation
APS56_RS00790	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APS56_RS00790	PWY-6435	4-hydroxybenzoate biosynthesis V
APS56_RS00790	PWY-6583	pyruvate fermentation to butanol I
APS56_RS00790	PWY-6863	pyruvate fermentation to hexanol
APS56_RS00790	PWY-6883	pyruvate fermentation to butanol II
APS56_RS00790	PWY-6944	androstenedione degradation
APS56_RS00790	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
APS56_RS00790	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APS56_RS00790	PWY-7007	methyl ketone biosynthesis
APS56_RS00790	PWY-7046	4-coumarate degradation (anaerobic)
APS56_RS00790	PWY-7094	fatty acid salvage
APS56_RS00790	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
APS56_RS00790	PWY-735	jasmonic acid biosynthesis
APS56_RS00790	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
APS56_RS00790	PWY-7606	docosahexaenoate biosynthesis III (mammals)
APS56_RS00790	PWY-7726	APS56_RS00790
APS56_RS00815	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
APS56_RS00815	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APS56_RS00850	PWY-5958	acridone alkaloid biosynthesis
APS56_RS00850	PWY-6543	4-aminobenzoate biosynthesis
APS56_RS00850	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APS56_RS00850	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APS56_RS00865	PWY-6610	adenine and adenosine salvage IV
APS56_RS00900	PWY-6683	sulfate reduction III (assimilatory)
APS56_RS00935	PWY-6683	sulfate reduction III (assimilatory)
APS56_RS01300	PWY-6829	tRNA methylation (yeast)
APS56_RS01300	PWY-7285	methylwyosine biosynthesis
APS56_RS01300	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
APS56_RS01350	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
APS56_RS01580	PWY-6012	acyl carrier protein metabolism I
APS56_RS01585	PWY-6749	CMP-legionaminate biosynthesis I
APS56_RS01610	PWY-7205	CMP phosphorylation
APS56_RS01655	PWY-5686	UMP biosynthesis
APS56_RS01675	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
APS56_RS01675	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
APS56_RS01775	PWY-6825	phosphatidylcholine biosynthesis V
APS56_RS01800	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APS56_RS01840	PWY-6936	seleno-amino acid biosynthesis
APS56_RS01900	PWY-7396	butanol and isobutanol biosynthesis (engineered)
APS56_RS01905	PWY-6871	3-methylbutanol biosynthesis
APS56_RS02005	PWY-5367	petroselinate biosynthesis
APS56_RS02005	PWY-5515	L-arabinose degradation II
APS56_RS02005	PWY-5525	D-glucuronate degradation I
APS56_RS02005	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APS56_RS02005	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APS56_RS02005	PWY-5989	stearate biosynthesis II (bacteria and plants)
APS56_RS02005	PWY-5994	palmitate biosynthesis I (animals and fungi)
APS56_RS02005	PWY-6113	superpathway of mycolate biosynthesis
APS56_RS02005	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APS56_RS02005	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APS56_RS02005	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APS56_RS02005	PWY-7663	gondoate biosynthesis (anaerobic)
APS56_RS02005	PWY-7664	oleate biosynthesis IV (anaerobic)
APS56_RS02005	PWYG-321	mycolate biosynthesis
APS56_RS02010	PWY-5392	reductive TCA cycle II
APS56_RS02010	PWY-5537	pyruvate fermentation to acetate V
APS56_RS02010	PWY-5538	pyruvate fermentation to acetate VI
APS56_RS02010	PWY-5690	TCA cycle II (plants and fungi)
APS56_RS02010	PWY-5913	TCA cycle VI (obligate autotrophs)
APS56_RS02010	PWY-6728	methylaspartate cycle
APS56_RS02010	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APS56_RS02010	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APS56_RS02030	PWY-2201	folate transformations I
APS56_RS02030	PWY-5497	purine nucleobases degradation II (anaerobic)
APS56_RS02030	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APS56_RS02030	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APS56_RS02030	PWY-5989	stearate biosynthesis II (bacteria and plants)
APS56_RS02030	PWY-5994	palmitate biosynthesis I (animals and fungi)
APS56_RS02030	PWY-6113	superpathway of mycolate biosynthesis
APS56_RS02030	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APS56_RS02030	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APS56_RS02030	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APS56_RS02030	PWY-7663	gondoate biosynthesis (anaerobic)
APS56_RS02030	PWY-7664	oleate biosynthesis IV (anaerobic)
APS56_RS02030	PWYG-321	mycolate biosynthesis
APS56_RS02085	PWY-6164	3-dehydroquinate biosynthesis I
APS56_RS02125	PWY-7346	UDP-&alpha;-D-glucuronate biosynthesis (from UDP-glucose)
APS56_RS02310	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
APS56_RS02310	PWY-6853	ethylene biosynthesis II (microbes)
APS56_RS02310	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APS56_RS02345	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APS56_RS02375	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS02375	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS02380	PWY-6840	homoglutathione biosynthesis
APS56_RS02380	PWY-7255	ergothioneine biosynthesis I (bacteria)
APS56_RS02390	PWY-6654	phosphopantothenate biosynthesis III
APS56_RS02420	PWY-5506	methanol oxidation to formaldehyde IV
APS56_RS02430	PWY-7039	phosphatidate metabolism, as a signaling molecule
APS56_RS02455	PWY-6167	flavin biosynthesis II (archaea)
APS56_RS02455	PWY-6168	flavin biosynthesis III (fungi)
APS56_RS02455	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APS56_RS02670	PWY-5839	menaquinol-7 biosynthesis
APS56_RS02670	PWY-5844	menaquinol-9 biosynthesis
APS56_RS02670	PWY-5849	menaquinol-6 biosynthesis
APS56_RS02670	PWY-5890	menaquinol-10 biosynthesis
APS56_RS02670	PWY-5891	menaquinol-11 biosynthesis
APS56_RS02670	PWY-5892	menaquinol-12 biosynthesis
APS56_RS02670	PWY-5895	menaquinol-13 biosynthesis
APS56_RS02870	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS02870	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS02870	PWY-6901	superpathway of glucose and xylose degradation
APS56_RS02870	PWY-7003	glycerol degradation to butanol
APS56_RS02875	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS02875	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APS56_RS02875	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS02875	PWY-7385	1,3-propanediol biosynthesis (engineered)
APS56_RS02885	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
APS56_RS02885	PWY-5368	dimorphecolate biosynthesis
APS56_RS02885	PWY-5995	linoleate biosynthesis I (plants)
APS56_RS02885	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
APS56_RS02885	PWY-6803	phosphatidylcholine acyl editing
APS56_RS02885	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
APS56_RS02885	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
APS56_RS02885	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
APS56_RS02885	PWY-7470	phosphatidylcholine biosynthesis VII
APS56_RS02885	PWY-7618	ricinoleate biosynthesis
APS56_RS02895	PWY-2201	folate transformations I
APS56_RS02930	PWY-6902	chitin degradation II
APS56_RS02965	PWY-6902	chitin degradation II
APS56_RS03055	PWY-6902	chitin degradation II
APS56_RS03070	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
APS56_RS03100	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APS56_RS03100	PWY-6855	chitin degradation I (archaea)
APS56_RS03100	PWY-6906	chitin derivatives degradation
APS56_RS03140	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APS56_RS03140	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APS56_RS03185	PWY-4381	fatty acid biosynthesis initiation I
APS56_RS03185	PWY-5743	3-hydroxypropanoate cycle
APS56_RS03185	PWY-5744	glyoxylate assimilation
APS56_RS03185	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APS56_RS03185	PWY-6679	jadomycin biosynthesis
APS56_RS03185	PWY-6722	candicidin biosynthesis
APS56_RS03185	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APS56_RS03295	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
APS56_RS03295	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APS56_RS03305	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APS56_RS03305	PWY-6416	quinate degradation II
APS56_RS03305	PWY-6707	gallate biosynthesis
APS56_RS03345	PWY-6823	molybdenum cofactor biosynthesis
APS56_RS03345	PWY-6891	thiazole biosynthesis II (Bacillus)
APS56_RS03345	PWY-6892	thiazole biosynthesis I (E. coli)
APS56_RS03345	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
APS56_RS03380	PWY-6672	<i>cis</i>-genanyl-CoA degradation
APS56_RS03380	PWY-7118	chitin degradation to ethanol
APS56_RS03400	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APS56_RS03400	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS03400	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APS56_RS03400	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APS56_RS03495	PWY-43	putrescine biosynthesis II
APS56_RS03570	PWY-6938	NADH repair
APS56_RS03575	PWY-2941	L-lysine biosynthesis II
APS56_RS03575	PWY-2942	L-lysine biosynthesis III
APS56_RS03575	PWY-5097	L-lysine biosynthesis VI
APS56_RS03575	PWY-6559	spermidine biosynthesis II
APS56_RS03575	PWY-6562	norspermidine biosynthesis
APS56_RS03575	PWY-7153	grixazone biosynthesis
APS56_RS03580	PWY-702	L-methionine biosynthesis II
APS56_RS03610	PWY-7158	L-phenylalanine degradation V
APS56_RS03700	PWY-1622	formaldehyde assimilation I (serine pathway)
APS56_RS03700	PWY-181	photorespiration
APS56_RS03700	PWY-2161	folate polyglutamylation
APS56_RS03700	PWY-2201	folate transformations I
APS56_RS03700	PWY-3661	glycine betaine degradation I
APS56_RS03700	PWY-3661-1	glycine betaine degradation II (mammalian)
APS56_RS03700	PWY-3841	folate transformations II
APS56_RS03700	PWY-5497	purine nucleobases degradation II (anaerobic)
APS56_RS03720	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
APS56_RS03755	PWY-6823	molybdenum cofactor biosynthesis
APS56_RS03770	PWY-5964	guanylyl molybdenum cofactor biosynthesis
APS56_RS03770	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
APS56_RS03785	PWY-6823	molybdenum cofactor biosynthesis
APS56_RS03795	PWY-6823	molybdenum cofactor biosynthesis
APS56_RS03830	PWY-5663	tetrahydrobiopterin biosynthesis I
APS56_RS03830	PWY-5664	tetrahydrobiopterin biosynthesis II
APS56_RS03830	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APS56_RS03830	PWY-6703	preQ<sub>0</sub> biosynthesis
APS56_RS03830	PWY-6983	tetrahydrobiopterin biosynthesis III
APS56_RS03830	PWY-7442	drosopterin and aurodrosopterin biosynthesis
APS56_RS03895	PWY-5316	nicotine biosynthesis
APS56_RS03895	PWY-5381	pyridine nucleotide cycling (plants)
APS56_RS03895	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
APS56_RS03895	PWY-7342	superpathway of nicotine biosynthesis
APS56_RS03900	PWY-6825	phosphatidylcholine biosynthesis V
APS56_RS03910	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
APS56_RS03925	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS03985	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APS56_RS04025	PWY-4381	fatty acid biosynthesis initiation I
APS56_RS04025	PWY-5743	3-hydroxypropanoate cycle
APS56_RS04025	PWY-5744	glyoxylate assimilation
APS56_RS04025	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APS56_RS04025	PWY-6679	jadomycin biosynthesis
APS56_RS04025	PWY-6722	candicidin biosynthesis
APS56_RS04025	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APS56_RS04040	PWY-6700	queuosine biosynthesis
APS56_RS04065	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APS56_RS04270	PWY-5392	reductive TCA cycle II
APS56_RS04270	PWY-5537	pyruvate fermentation to acetate V
APS56_RS04270	PWY-5538	pyruvate fermentation to acetate VI
APS56_RS04270	PWY-5690	TCA cycle II (plants and fungi)
APS56_RS04270	PWY-5913	TCA cycle VI (obligate autotrophs)
APS56_RS04270	PWY-6728	methylaspartate cycle
APS56_RS04270	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APS56_RS04270	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APS56_RS04275	PWY-2941	L-lysine biosynthesis II
APS56_RS04275	PWY-2942	L-lysine biosynthesis III
APS56_RS04275	PWY-5097	L-lysine biosynthesis VI
APS56_RS04370	PWY-723	alkylnitronates degradation
APS56_RS04400	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
APS56_RS04400	PWY-7177	UTP and CTP dephosphorylation II
APS56_RS04400	PWY-7185	UTP and CTP dephosphorylation I
APS56_RS04415	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS04455	PWY-5057	L-valine degradation II
APS56_RS04455	PWY-5076	L-leucine degradation III
APS56_RS04455	PWY-5078	L-isoleucine degradation II
APS56_RS04455	PWY-5101	L-isoleucine biosynthesis II
APS56_RS04455	PWY-5103	L-isoleucine biosynthesis III
APS56_RS04455	PWY-5104	L-isoleucine biosynthesis IV
APS56_RS04455	PWY-5108	L-isoleucine biosynthesis V
APS56_RS04495	PWY-2201	folate transformations I
APS56_RS04495	PWY-5497	purine nucleobases degradation II (anaerobic)
APS56_RS04510	PWY-5686	UMP biosynthesis
APS56_RS04520	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APS56_RS04520	PWY-6596	adenosine nucleotides degradation I
APS56_RS04520	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS04540	PWY-5686	UMP biosynthesis
APS56_RS04550	PWY-4261	glycerol degradation I
APS56_RS04550	PWY-6118	glycerol-3-phosphate shuttle
APS56_RS04550	PWY-6952	glycerophosphodiester degradation
APS56_RS04775	PWY-6807	xyloglucan degradation II (exoglucanase)
APS56_RS04945	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS04945	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS04945	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS04945	PWY-7003	glycerol degradation to butanol
APS56_RS04970	PWY-6614	tetrahydrofolate biosynthesis
APS56_RS05015	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS05030	PWY-4381	fatty acid biosynthesis initiation I
APS56_RS05050	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APS56_RS05050	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS05050	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APS56_RS05050	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APS56_RS05050	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS05050	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS05050	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS05050	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APS56_RS05070	PWY-381	nitrate reduction II (assimilatory)
APS56_RS05070	PWY-5675	nitrate reduction V (assimilatory)
APS56_RS05070	PWY-6549	L-glutamine biosynthesis III
APS56_RS05070	PWY-6963	ammonia assimilation cycle I
APS56_RS05070	PWY-6964	ammonia assimilation cycle II
APS56_RS05075	PWY-381	nitrate reduction II (assimilatory)
APS56_RS05075	PWY-5675	nitrate reduction V (assimilatory)
APS56_RS05075	PWY-6549	L-glutamine biosynthesis III
APS56_RS05075	PWY-6963	ammonia assimilation cycle I
APS56_RS05075	PWY-6964	ammonia assimilation cycle II
APS56_RS05115	PWY-3341	L-proline biosynthesis III
APS56_RS05115	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APS56_RS05120	PWY-3341	L-proline biosynthesis III
APS56_RS05120	PWY-4981	L-proline biosynthesis II (from arginine)
APS56_RS05120	PWY-6344	L-ornithine degradation II (Stickland reaction)
APS56_RS05280	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
APS56_RS05280	PWY-6749	CMP-legionaminate biosynthesis I
APS56_RS05280	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
APS56_RS05280	PWY-7102	bisabolene biosynthesis
APS56_RS05280	PWY-7131	CMP-legionaminate biosynthesis II
APS56_RS05280	PWY-7721	APS56_RS05280
APS56_RS05280	PWY-7736	APS56_RS05280
APS56_RS05285	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APS56_RS05395	PWY-5340	sulfate activation for sulfonation
APS56_RS05430	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
APS56_RS05430	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
APS56_RS05430	PWY-6268	adenosylcobalamin salvage from cobalamin
APS56_RS05430	PWY-6269	adenosylcobalamin salvage from cobinamide II
APS56_RS05465	PWY-5303	thiosulfate oxidation II (via tetrathionate)
APS56_RS05480	PWY-6454	vancomycin resistance I
APS56_RS05480	PWY-6455	vancomycin resistance II
APS56_RS05510	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
APS56_RS05510	PWY-6174	mevalonate pathway II (archaea)
APS56_RS05510	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
APS56_RS05510	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
APS56_RS05510	PWY-7102	bisabolene biosynthesis
APS56_RS05510	PWY-7391	isoprene biosynthesis II (engineered)
APS56_RS05510	PWY-7524	mevalonate pathway III (archaea)
APS56_RS05510	PWY-7560	methylerythritol phosphate pathway II
APS56_RS05510	PWY-922	mevalonate pathway I
APS56_RS05750	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
APS56_RS05750	PWY-7688	APS56_RS05750
APS56_RS05795	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APS56_RS05795	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
APS56_RS06060	PWY-7651	heparan sulfate degradation
APS56_RS06080	PWY-7651	heparan sulfate degradation
APS56_RS06110	PWY-7651	heparan sulfate degradation
APS56_RS06265	PWY-6902	chitin degradation II
APS56_RS06310	PWY-6902	chitin degradation II
APS56_RS06315	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APS56_RS06315	PWY-6855	chitin degradation I (archaea)
APS56_RS06315	PWY-6906	chitin derivatives degradation
APS56_RS06345	PWY-6906	chitin derivatives degradation
APS56_RS06345	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
APS56_RS06345	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
APS56_RS06360	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
APS56_RS06390	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS06390	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APS56_RS06390	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS06390	PWY-5723	Rubisco shunt
APS56_RS06390	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS06390	PWY-6886	1-butanol autotrophic biosynthesis
APS56_RS06390	PWY-6901	superpathway of glucose and xylose degradation
APS56_RS06390	PWY-7003	glycerol degradation to butanol
APS56_RS06390	PWY-7124	ethylene biosynthesis V (engineered)
APS56_RS06390	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APS56_RS06495	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APS56_RS06555	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS06565	PWY-6123	inosine-5'-phosphate biosynthesis I
APS56_RS06565	PWY-7234	inosine-5'-phosphate biosynthesis III
APS56_RS06595	PWY-4381	fatty acid biosynthesis initiation I
APS56_RS06680	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
APS56_RS06680	PWY-5491	diethylphosphate degradation
APS56_RS06740	PWY-6556	pyrimidine ribonucleosides salvage II
APS56_RS06740	PWY-7181	pyrimidine deoxyribonucleosides degradation
APS56_RS06740	PWY-7193	pyrimidine ribonucleosides salvage I
APS56_RS06740	PWY-7199	pyrimidine deoxyribonucleosides salvage
APS56_RS06760	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS06760	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS07265	PWY-2201	folate transformations I
APS56_RS07270	PWY-6700	queuosine biosynthesis
APS56_RS07275	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APS56_RS07310	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APS56_RS07310	PWY-3461	L-tyrosine biosynthesis II
APS56_RS07310	PWY-3462	L-phenylalanine biosynthesis II
APS56_RS07310	PWY-6120	L-tyrosine biosynthesis III
APS56_RS07310	PWY-6627	salinosporamide A biosynthesis
APS56_RS07310	PWY-7626	bacilysin biosynthesis
APS56_RS07310	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
APS56_RS07315	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
APS56_RS07325	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
APS56_RS07335	PWY-1281	sulfoacetaldehyde degradation I
APS56_RS07335	PWY-5482	pyruvate fermentation to acetate II
APS56_RS07335	PWY-5485	pyruvate fermentation to acetate IV
APS56_RS07335	PWY-5497	purine nucleobases degradation II (anaerobic)
APS56_RS07335	PWY-6637	sulfolactate degradation II
APS56_RS07340	PWY-5482	pyruvate fermentation to acetate II
APS56_RS07340	PWY-5485	pyruvate fermentation to acetate IV
APS56_RS07340	PWY-5497	purine nucleobases degradation II (anaerobic)
APS56_RS07355	PWY-2201	folate transformations I
APS56_RS07355	PWY-3841	folate transformations II
APS56_RS07360	PWY-2201	folate transformations I
APS56_RS07360	PWY-3841	folate transformations II
APS56_RS07370	PWY-6936	seleno-amino acid biosynthesis
APS56_RS07380	PWY-101	photosynthesis light reactions
APS56_RS07380	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
APS56_RS07385	PWY-5194	siroheme biosynthesis
APS56_RS07385	PWY-5441	S-methyl-L-methionine cycle
APS56_RS07385	PWY-702	L-methionine biosynthesis II
APS56_RS07385	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
APS56_RS07390	PWY-5194	siroheme biosynthesis
APS56_RS07390	PWY-5441	S-methyl-L-methionine cycle
APS56_RS07390	PWY-702	L-methionine biosynthesis II
APS56_RS07390	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
APS56_RS07395	PWY-6683	sulfate reduction III (assimilatory)
APS56_RS07400	PWY-5278	sulfite oxidation III
APS56_RS07400	PWY-5340	sulfate activation for sulfonation
APS56_RS07400	PWY-6683	sulfate reduction III (assimilatory)
APS56_RS07400	PWY-6932	selenate reduction
APS56_RS07405	PWY-5278	sulfite oxidation III
APS56_RS07405	PWY-5340	sulfate activation for sulfonation
APS56_RS07405	PWY-6683	sulfate reduction III (assimilatory)
APS56_RS07405	PWY-6932	selenate reduction
APS56_RS07430	PWY-2941	L-lysine biosynthesis II
APS56_RS07430	PWY-2942	L-lysine biosynthesis III
APS56_RS07430	PWY-5097	L-lysine biosynthesis VI
APS56_RS07430	PWY-6559	spermidine biosynthesis II
APS56_RS07430	PWY-6562	norspermidine biosynthesis
APS56_RS07430	PWY-7153	grixazone biosynthesis
APS56_RS07435	PWY-5344	L-homocysteine biosynthesis
APS56_RS07435	PWY-7174	<i>S</i>-methyl-5-thio-&alpha;-D-ribose 1-phosphate degradation II
APS56_RS07445	PWY-6871	3-methylbutanol biosynthesis
APS56_RS07450	PWY-7396	butanol and isobutanol biosynthesis (engineered)
APS56_RS07465	PWY-4983	L-citrulline-nitric oxide cycle
APS56_RS07465	PWY-4984	urea cycle
APS56_RS07465	PWY-5	canavanine biosynthesis
APS56_RS07465	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APS56_RS07465	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APS56_RS07475	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APS56_RS07475	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APS56_RS07480	PWY-5686	UMP biosynthesis
APS56_RS07485	PWY-3341	L-proline biosynthesis III
APS56_RS07485	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APS56_RS07490	PWY-3341	L-proline biosynthesis III
APS56_RS07490	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
APS56_RS07500	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APS56_RS07500	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APS56_RS07505	PWY-4983	L-citrulline-nitric oxide cycle
APS56_RS07505	PWY-4984	urea cycle
APS56_RS07505	PWY-5	canavanine biosynthesis
APS56_RS07505	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APS56_RS07505	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APS56_RS07740	PWY-6825	phosphatidylcholine biosynthesis V
APS56_RS07755	PWY-7425	2-chloroacrylate degradation I
APS56_RS07760	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APS56_RS07760	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APS56_RS07760	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APS56_RS07775	PWY-5480	pyruvate fermentation to ethanol I
APS56_RS07775	PWY-5485	pyruvate fermentation to acetate IV
APS56_RS07775	PWY-5493	reductive monocarboxylic acid cycle
APS56_RS07795	PWY-1361	benzoyl-CoA degradation I (aerobic)
APS56_RS07795	PWY-5109	2-methylbutanoate biosynthesis
APS56_RS07795	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
APS56_RS07795	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
APS56_RS07795	PWY-5177	glutaryl-CoA degradation
APS56_RS07795	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APS56_RS07795	PWY-6435	4-hydroxybenzoate biosynthesis V
APS56_RS07795	PWY-6583	pyruvate fermentation to butanol I
APS56_RS07795	PWY-6863	pyruvate fermentation to hexanol
APS56_RS07795	PWY-6883	pyruvate fermentation to butanol II
APS56_RS07795	PWY-6944	androstenedione degradation
APS56_RS07795	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
APS56_RS07795	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
APS56_RS07795	PWY-7007	methyl ketone biosynthesis
APS56_RS07795	PWY-7046	4-coumarate degradation (anaerobic)
APS56_RS07795	PWY-7094	fatty acid salvage
APS56_RS07795	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
APS56_RS07795	PWY-735	jasmonic acid biosynthesis
APS56_RS07795	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
APS56_RS07795	PWY-7606	docosahexaenoate biosynthesis III (mammals)
APS56_RS07795	PWY-7726	APS56_RS07795
APS56_RS07830	PWY-5941	glycogen degradation II (eukaryotic)
APS56_RS07830	PWY-6724	starch degradation II
APS56_RS07830	PWY-6737	starch degradation V
APS56_RS07830	PWY-7238	sucrose biosynthesis II
APS56_RS07875	PWY-3781	aerobic respiration I (cytochrome c)
APS56_RS07875	PWY-4521	arsenite oxidation I (respiratory)
APS56_RS07875	PWY-6692	Fe(II) oxidation
APS56_RS07875	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APS56_RS07905	PWY-6317	galactose degradation I (Leloir pathway)
APS56_RS07905	PWY-6527	stachyose degradation
APS56_RS07910	PWY-3821	galactose degradation III
APS56_RS07910	PWY-6317	galactose degradation I (Leloir pathway)
APS56_RS07910	PWY-6527	stachyose degradation
APS56_RS07960	PWY-4202	arsenate detoxification I (glutaredoxin)
APS56_RS07960	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APS56_RS07960	PWY-6608	guanosine nucleotides degradation III
APS56_RS07960	PWY-6609	adenine and adenosine salvage III
APS56_RS07960	PWY-6611	adenine and adenosine salvage V
APS56_RS07960	PWY-6620	guanine and guanosine salvage
APS56_RS07960	PWY-6627	salinosporamide A biosynthesis
APS56_RS07960	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
APS56_RS07960	PWY-7179	purine deoxyribonucleosides degradation I
APS56_RS07960	PWY-7179-1	purine deoxyribonucleosides degradation
APS56_RS07990	PWY-5750	itaconate biosynthesis
APS56_RS07990	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS07990	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
APS56_RS07995	PWY-1081	homogalacturonan degradation
APS56_RS08045	PWY-6339	syringate degradation
APS56_RS08055	PWY-6339	syringate degradation
APS56_RS08060	PWY-4381	fatty acid biosynthesis initiation I
APS56_RS08060	PWY-5743	3-hydroxypropanoate cycle
APS56_RS08060	PWY-5744	glyoxylate assimilation
APS56_RS08060	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APS56_RS08060	PWY-6679	jadomycin biosynthesis
APS56_RS08060	PWY-6722	candicidin biosynthesis
APS56_RS08060	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APS56_RS08065	PWY-5741	ethylmalonyl-CoA pathway
APS56_RS08065	PWY-5743	3-hydroxypropanoate cycle
APS56_RS08065	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APS56_RS08065	PWY-6728	methylaspartate cycle
APS56_RS08065	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APS56_RS08090	PWY-40	putrescine biosynthesis I
APS56_RS08090	PWY-6305	putrescine biosynthesis IV
APS56_RS08095	PWY-40	putrescine biosynthesis I
APS56_RS08095	PWY-43	putrescine biosynthesis II
APS56_RS08095	PWY-6305	putrescine biosynthesis IV
APS56_RS08095	PWY-6834	spermidine biosynthesis III
APS56_RS08235	PWY-6123	inosine-5'-phosphate biosynthesis I
APS56_RS08235	PWY-6124	inosine-5'-phosphate biosynthesis II
APS56_RS08235	PWY-7234	inosine-5'-phosphate biosynthesis III
APS56_RS08405	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APS56_RS08405	PWY-5723	Rubisco shunt
APS56_RS08455	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS08455	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS08460	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APS56_RS08460	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
APS56_RS08460	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APS56_RS08460	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APS56_RS08470	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS08470	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS08475	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APS56_RS08475	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APS56_RS08475	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APS56_RS08495	PWY-2201	folate transformations I
APS56_RS08525	PWY-5381	pyridine nucleotide cycling (plants)
APS56_RS08525	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
APS56_RS08525	PWY-6596	adenosine nucleotides degradation I
APS56_RS08525	PWY-6606	guanosine nucleotides degradation II
APS56_RS08525	PWY-6607	guanosine nucleotides degradation I
APS56_RS08525	PWY-6608	guanosine nucleotides degradation III
APS56_RS08525	PWY-7185	UTP and CTP dephosphorylation I
APS56_RS08535	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
APS56_RS08535	PWY-622	starch biosynthesis
APS56_RS08570	PWY-6174	mevalonate pathway II (archaea)
APS56_RS08570	PWY-7391	isoprene biosynthesis II (engineered)
APS56_RS08570	PWY-7524	mevalonate pathway III (archaea)
APS56_RS08570	PWY-922	mevalonate pathway I
APS56_RS08610	PWY-3961	phosphopantothenate biosynthesis II
APS56_RS08725	PWY-6854	ethylene biosynthesis III (microbes)
APS56_RS08755	PWY-5103	L-isoleucine biosynthesis III
APS56_RS08755	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APS56_RS08760	PWY-5101	L-isoleucine biosynthesis II
APS56_RS08760	PWY-5103	L-isoleucine biosynthesis III
APS56_RS08760	PWY-5104	L-isoleucine biosynthesis IV
APS56_RS08760	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APS56_RS08760	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APS56_RS08760	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APS56_RS08760	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APS56_RS08765	PWY-5101	L-isoleucine biosynthesis II
APS56_RS08765	PWY-5103	L-isoleucine biosynthesis III
APS56_RS08765	PWY-5104	L-isoleucine biosynthesis IV
APS56_RS08765	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
APS56_RS08765	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
APS56_RS08765	PWY-6389	(<i>S</i>)-acetoin biosynthesis
APS56_RS08765	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APS56_RS08770	PWY-5101	L-isoleucine biosynthesis II
APS56_RS08770	PWY-5103	L-isoleucine biosynthesis III
APS56_RS08770	PWY-5104	L-isoleucine biosynthesis IV
APS56_RS08770	PWY-7111	pyruvate fermentation to isobutanol (engineered)
APS56_RS08775	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
APS56_RS08775	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
APS56_RS08830	PWY-3841	folate transformations II
APS56_RS08830	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS08830	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS08830	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APS56_RS08830	PWY-7199	pyrimidine deoxyribonucleosides salvage
APS56_RS08830	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APS56_RS08840	PWY-3841	folate transformations II
APS56_RS08840	PWY-6614	tetrahydrofolate biosynthesis
APS56_RS08885	PWY-4381	fatty acid biosynthesis initiation I
APS56_RS08885	PWY-6799	fatty acid biosynthesis (plant mitochondria)
APS56_RS08885	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APS56_RS08895	PWY-3821	galactose degradation III
APS56_RS08895	PWY-6317	galactose degradation I (Leloir pathway)
APS56_RS08895	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
APS56_RS08895	PWY-6527	stachyose degradation
APS56_RS08895	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
APS56_RS08895	PWY-7344	UDP-D-galactose biosynthesis
APS56_RS08905	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
APS56_RS08915	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS08915	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS08960	PWY-4041	&gamma;-glutamyl cycle
APS56_RS08960	PWY-5826	hypoglycin biosynthesis
APS56_RS09065	PWY-7391	isoprene biosynthesis II (engineered)
APS56_RS09065	PWY-922	mevalonate pathway I
APS56_RS09070	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
APS56_RS09130	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APS56_RS09135	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
APS56_RS09265	PWY-6891	thiazole biosynthesis II (Bacillus)
APS56_RS09265	PWY-6892	thiazole biosynthesis I (E. coli)
APS56_RS09265	PWY-7560	methylerythritol phosphate pathway II
APS56_RS09285	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APS56_RS09285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS09285	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APS56_RS09285	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APS56_RS09375	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APS56_RS09375	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS09375	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APS56_RS09375	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APS56_RS09375	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS09375	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS09375	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS09375	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APS56_RS09380	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APS56_RS09380	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS09380	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APS56_RS09380	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APS56_RS09380	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS09380	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS09380	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS09380	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APS56_RS09415	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APS56_RS09465	PWY-1622	formaldehyde assimilation I (serine pathway)
APS56_RS09465	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APS56_RS09465	PWY-5913	TCA cycle VI (obligate autotrophs)
APS56_RS09465	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS09465	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
APS56_RS09465	PWY-6549	L-glutamine biosynthesis III
APS56_RS09465	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APS56_RS09465	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APS56_RS09465	PWY-7124	ethylene biosynthesis V (engineered)
APS56_RS09475	PWY-5316	nicotine biosynthesis
APS56_RS09475	PWY-7342	superpathway of nicotine biosynthesis
APS56_RS09480	PWY-5316	nicotine biosynthesis
APS56_RS09480	PWY-7342	superpathway of nicotine biosynthesis
APS56_RS09495	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS09505	PWY-2941	L-lysine biosynthesis II
APS56_RS09505	PWY-2942	L-lysine biosynthesis III
APS56_RS09505	PWY-5097	L-lysine biosynthesis VI
APS56_RS09505	PWY-6559	spermidine biosynthesis II
APS56_RS09505	PWY-6562	norspermidine biosynthesis
APS56_RS09505	PWY-7153	grixazone biosynthesis
APS56_RS09585	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
APS56_RS09595	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
APS56_RS09595	PWY-6167	flavin biosynthesis II (archaea)
APS56_RS09595	PWY-6168	flavin biosynthesis III (fungi)
APS56_RS09605	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
APS56_RS09865	PWY-6807	xyloglucan degradation II (exoglucanase)
APS56_RS10005	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS10010	PWY-5381	pyridine nucleotide cycling (plants)
APS56_RS10010	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
APS56_RS10110	PWY-5667	CDP-diacylglycerol biosynthesis I
APS56_RS10110	PWY-5981	CDP-diacylglycerol biosynthesis III
APS56_RS10460	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APS56_RS10465	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APS56_RS10465	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APS56_RS10470	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
APS56_RS10470	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
APS56_RS10485	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
APS56_RS10485	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
APS56_RS10500	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APS56_RS10500	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APS56_RS10645	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APS56_RS10645	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS10645	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS10645	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
APS56_RS10660	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS10730	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
APS56_RS10730	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
APS56_RS10730	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
APS56_RS10745	PWY-6655	xanthan biosynthesis
APS56_RS10745	PWY-6658	acetan biosynthesis
APS56_RS10810	PWY-7335	UDP-<i>N</i>-acetyl-&alpha;-D-mannosaminouronate biosynthesis
APS56_RS10825	PWY-3221	dTDP-L-rhamnose biosynthesis II
APS56_RS10825	PWY-6808	dTDP-D-forosamine biosynthesis
APS56_RS10825	PWY-6942	dTDP-D-desosamine biosynthesis
APS56_RS10825	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
APS56_RS10825	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
APS56_RS10825	PWY-6974	dTDP-L-olivose biosynthesis
APS56_RS10825	PWY-6976	dTDP-L-mycarose biosynthesis
APS56_RS10825	PWY-7104	dTDP-L-megosamine biosynthesis
APS56_RS10825	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
APS56_RS10825	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
APS56_RS10825	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
APS56_RS10825	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
APS56_RS10825	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
APS56_RS10825	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
APS56_RS10825	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
APS56_RS10825	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
APS56_RS10825	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
APS56_RS10825	PWY-7688	APS56_RS10825
APS56_RS10830	PWY-3221	dTDP-L-rhamnose biosynthesis II
APS56_RS10830	PWY-6808	dTDP-D-forosamine biosynthesis
APS56_RS10830	PWY-6942	dTDP-D-desosamine biosynthesis
APS56_RS10830	PWY-6953	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis
APS56_RS10830	PWY-6973	dTDP-D-olivose, dTDP-D-oliose and dTDP-D-mycarose biosynthesis
APS56_RS10830	PWY-6974	dTDP-L-olivose biosynthesis
APS56_RS10830	PWY-6976	dTDP-L-mycarose biosynthesis
APS56_RS10830	PWY-7104	dTDP-L-megosamine biosynthesis
APS56_RS10830	PWY-7301	dTDP-&beta;-L-noviose biosynthesis
APS56_RS10830	PWY-7312	dTDP-D-&beta;-fucofuranose biosynthesis
APS56_RS10830	PWY-7315	dTDP-<i>N</i>-acetylthomosamine biosynthesis
APS56_RS10830	PWY-7316	dTDP-<i>N</i>-acetylviosamine biosynthesis
APS56_RS10830	PWY-7318	dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-glucose biosynthesis
APS56_RS10830	PWY-7413	dTDP-6-deoxy-&alpha;-D-allose biosynthesis
APS56_RS10830	PWY-7414	dTDP-&alpha;-D-mycaminose biosynthesis
APS56_RS10830	PWY-7440	dTDP-&beta;-L-4-<i>epi</i>-vancosamine biosynthesis
APS56_RS10830	PWY-7657	dTDP-&beta;-L-digitoxose biosynthesis
APS56_RS10830	PWY-7688	APS56_RS10830
APS56_RS10870	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS10870	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS10870	PWY-6886	1-butanol autotrophic biosynthesis
APS56_RS10870	PWY-6901	superpathway of glucose and xylose degradation
APS56_RS10870	PWY-7003	glycerol degradation to butanol
APS56_RS10915	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APS56_RS11015	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APS56_RS11015	PWY-6148	tetrahydromethanopterin biosynthesis
APS56_RS11015	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
APS56_RS11015	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APS56_RS11020	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APS56_RS11050	PWY-6986	alginate degradation
APS56_RS11090	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
APS56_RS11090	PWY-622	starch biosynthesis
APS56_RS11095	PWY-622	starch biosynthesis
APS56_RS11100	PWY-622	starch biosynthesis
APS56_RS11145	PWY-3121	linamarin degradation
APS56_RS11145	PWY-5176	coumarin biosynthesis (via 2-coumarate)
APS56_RS11145	PWY-6002	lotaustralin degradation
APS56_RS11145	PWY-6788	cellulose degradation II (fungi)
APS56_RS11145	PWY-7089	taxiphyllin bioactivation
APS56_RS11145	PWY-7091	linustatin bioactivation
APS56_RS11145	PWY-7092	neolinustatin bioactivation
APS56_RS11165	PWY-6167	flavin biosynthesis II (archaea)
APS56_RS11165	PWY-6168	flavin biosynthesis III (fungi)
APS56_RS11165	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS11170	PWY-7294	xylose degradation IV
APS56_RS11170	PWY-7295	L-arabinose degradation IV
APS56_RS11185	PWY-4381	fatty acid biosynthesis initiation I
APS56_RS11240	PWY-2941	L-lysine biosynthesis II
APS56_RS11240	PWY-2942	L-lysine biosynthesis III
APS56_RS11240	PWY-5097	L-lysine biosynthesis VI
APS56_RS11240	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APS56_RS11240	PWY-6559	spermidine biosynthesis II
APS56_RS11240	PWY-6562	norspermidine biosynthesis
APS56_RS11240	PWY-7153	grixazone biosynthesis
APS56_RS11240	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APS56_RS11250	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APS56_RS11255	PWY-7199	pyrimidine deoxyribonucleosides salvage
APS56_RS11265	PWY-2201	folate transformations I
APS56_RS11330	PWY-6807	xyloglucan degradation II (exoglucanase)
APS56_RS11380	PWY-6854	ethylene biosynthesis III (microbes)
APS56_RS11435	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS11435	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APS56_RS11435	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS11435	PWY-5723	Rubisco shunt
APS56_RS11435	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS11435	PWY-6886	1-butanol autotrophic biosynthesis
APS56_RS11435	PWY-6901	superpathway of glucose and xylose degradation
APS56_RS11435	PWY-7003	glycerol degradation to butanol
APS56_RS11435	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APS56_RS11435	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APS56_RS11545	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APS56_RS11545	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS11545	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APS56_RS11545	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APS56_RS11735	PWY-3781	aerobic respiration I (cytochrome c)
APS56_RS11735	PWY-4302	aerobic respiration III (alternative oxidase pathway)
APS56_RS11735	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APS56_RS11735	PWY-5690	TCA cycle II (plants and fungi)
APS56_RS11735	PWY-6728	methylaspartate cycle
APS56_RS11735	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APS56_RS11735	PWY-7254	TCA cycle VII (acetate-producers)
APS56_RS11735	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APS56_RS11740	PWY-3781	aerobic respiration I (cytochrome c)
APS56_RS11740	PWY-4302	aerobic respiration III (alternative oxidase pathway)
APS56_RS11740	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APS56_RS11740	PWY-5690	TCA cycle II (plants and fungi)
APS56_RS11740	PWY-6728	methylaspartate cycle
APS56_RS11740	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APS56_RS11740	PWY-7254	TCA cycle VII (acetate-producers)
APS56_RS11740	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APS56_RS11760	PWY-2941	L-lysine biosynthesis II
APS56_RS11760	PWY-2942	L-lysine biosynthesis III
APS56_RS11760	PWY-5097	L-lysine biosynthesis VI
APS56_RS11760	PWY-6559	spermidine biosynthesis II
APS56_RS11760	PWY-6562	norspermidine biosynthesis
APS56_RS11760	PWY-7153	grixazone biosynthesis
APS56_RS11800	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
APS56_RS11800	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
APS56_RS11800	PWY-6896	thiamin salvage I
APS56_RS11800	PWY-6897	thiamin salvage II
APS56_RS11835	PWY-6823	molybdenum cofactor biosynthesis
APS56_RS11835	PWY-6891	thiazole biosynthesis II (Bacillus)
APS56_RS11835	PWY-6892	thiazole biosynthesis I (E. coli)
APS56_RS11835	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
APS56_RS11930	PWY-4702	phytate degradation I
APS56_RS11940	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
APS56_RS11945	PWY-6012	acyl carrier protein metabolism I
APS56_RS11945	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
APS56_RS11950	PWY-6349	CDP-archaeol biosynthesis
APS56_RS12025	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS12040	PWY-6749	CMP-legionaminate biosynthesis I
APS56_RS12050	PWY-622	starch biosynthesis
APS56_RS12060	PWY-5155	&beta;-alanine biosynthesis III
APS56_RS12155	PWY-3801	sucrose degradation II (sucrose synthase)
APS56_RS12155	PWY-5054	sorbitol biosynthesis I
APS56_RS12155	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
APS56_RS12155	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APS56_RS12155	PWY-5659	GDP-mannose biosynthesis
APS56_RS12155	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS12155	PWY-621	sucrose degradation III (sucrose invertase)
APS56_RS12155	PWY-622	starch biosynthesis
APS56_RS12155	PWY-6981	chitin biosynthesis
APS56_RS12155	PWY-6992	1,5-anhydrofructose degradation
APS56_RS12155	PWY-7238	sucrose biosynthesis II
APS56_RS12155	PWY-7347	sucrose biosynthesis III
APS56_RS12155	PWY-7385	1,3-propanediol biosynthesis (engineered)
APS56_RS12230	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
APS56_RS12320	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APS56_RS12320	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
APS56_RS12335	PWY-5686	UMP biosynthesis
APS56_RS12360	PWY-7723	APS56_RS12360
APS56_RS12385	PWY-4261	glycerol degradation I
APS56_RS12415	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
APS56_RS12415	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
APS56_RS12415	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
APS56_RS12415	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
APS56_RS12625	PWY-7247	&beta;-D-glucuronide and D-glucuronate degradation
APS56_RS12625	PWY-7248	pectin degradation III
APS56_RS12630	PWY-6531	mannitol cycle
APS56_RS12725	PWY-6784	cellulose and hemicellulose degradation (cellulolosome)
APS56_RS12795	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
APS56_RS12795	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
APS56_RS12795	PWY-7717	APS56_RS12795
APS56_RS12795	PWY-7733	APS56_RS12795
APS56_RS12795	PWY-7734	APS56_RS12795
APS56_RS12870	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
APS56_RS12870	PWY-5491	diethylphosphate degradation
APS56_RS12935	PWY-3781	aerobic respiration I (cytochrome c)
APS56_RS12935	PWY-4521	arsenite oxidation I (respiratory)
APS56_RS12935	PWY-6692	Fe(II) oxidation
APS56_RS12935	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
APS56_RS12960	PWY-6700	queuosine biosynthesis
APS56_RS12975	PWY-1281	sulfoacetaldehyde degradation I
APS56_RS12975	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
APS56_RS12975	PWY-5482	pyruvate fermentation to acetate II
APS56_RS12975	PWY-5485	pyruvate fermentation to acetate IV
APS56_RS12975	PWY-5497	purine nucleobases degradation II (anaerobic)
APS56_RS12975	PWY-6637	sulfolactate degradation II
APS56_RS12975	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
APS56_RS13080	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
APS56_RS13080	PWY-5368	dimorphecolate biosynthesis
APS56_RS13080	PWY-5995	linoleate biosynthesis I (plants)
APS56_RS13080	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
APS56_RS13080	PWY-6803	phosphatidylcholine acyl editing
APS56_RS13080	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
APS56_RS13080	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
APS56_RS13080	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
APS56_RS13080	PWY-7470	phosphatidylcholine biosynthesis VII
APS56_RS13080	PWY-7618	ricinoleate biosynthesis
APS56_RS13110	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS13110	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS13140	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
APS56_RS13140	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
APS56_RS13140	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
APS56_RS13215	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APS56_RS13215	PWY-6148	tetrahydromethanopterin biosynthesis
APS56_RS13215	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
APS56_RS13215	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
APS56_RS13620	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
APS56_RS13645	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
APS56_RS13645	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
APS56_RS13690	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
APS56_RS13690	PWY-6855	chitin degradation I (archaea)
APS56_RS13690	PWY-6906	chitin derivatives degradation
APS56_RS13705	PWY-6986	alginate degradation
APS56_RS13705	PWY-7651	heparan sulfate degradation
APS56_RS13755	PWY-6807	xyloglucan degradation II (exoglucanase)
APS56_RS13760	PWY-6807	xyloglucan degradation II (exoglucanase)
APS56_RS13795	PWY-2161	folate polyglutamylation
APS56_RS13830	PWY-1622	formaldehyde assimilation I (serine pathway)
APS56_RS13830	PWY-5392	reductive TCA cycle II
APS56_RS13830	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APS56_RS13830	PWY-5690	TCA cycle II (plants and fungi)
APS56_RS13830	PWY-5913	TCA cycle VI (obligate autotrophs)
APS56_RS13830	PWY-6728	methylaspartate cycle
APS56_RS13830	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APS56_RS13830	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
APS56_RS13830	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
APS56_RS14080	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APS56_RS14080	PWY-5686	UMP biosynthesis
APS56_RS14080	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APS56_RS14085	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS14085	PWY-1622	formaldehyde assimilation I (serine pathway)
APS56_RS14085	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APS56_RS14085	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS14085	PWY-5723	Rubisco shunt
APS56_RS14085	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS14085	PWY-6886	1-butanol autotrophic biosynthesis
APS56_RS14085	PWY-6901	superpathway of glucose and xylose degradation
APS56_RS14085	PWY-7003	glycerol degradation to butanol
APS56_RS14085	PWY-7124	ethylene biosynthesis V (engineered)
APS56_RS14085	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APS56_RS14095	PWY-4981	L-proline biosynthesis II (from arginine)
APS56_RS14105	PWY-5669	phosphatidylethanolamine biosynthesis I
APS56_RS14140	PWY-5686	UMP biosynthesis
APS56_RS14170	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
APS56_RS14170	PWY-2201	folate transformations I
APS56_RS14170	PWY-3841	folate transformations II
APS56_RS14170	PWY-5030	L-histidine degradation III
APS56_RS14170	PWY-5497	purine nucleobases degradation II (anaerobic)
APS56_RS14170	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
APS56_RS14200	PWY-6703	preQ<sub>0</sub> biosynthesis
APS56_RS14235	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
APS56_RS14265	PWY-5647	2-nitrobenzoate degradation I
APS56_RS14265	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
APS56_RS14265	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
APS56_RS14265	PWY-6505	L-tryptophan degradation XII (Geobacillus)
APS56_RS14275	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
APS56_RS14275	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
APS56_RS14275	PWY-7717	APS56_RS14275
APS56_RS14280	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
APS56_RS14280	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
APS56_RS14315	PWY-4381	fatty acid biosynthesis initiation I
APS56_RS14315	PWY-5743	3-hydroxypropanoate cycle
APS56_RS14315	PWY-5744	glyoxylate assimilation
APS56_RS14315	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
APS56_RS14315	PWY-6679	jadomycin biosynthesis
APS56_RS14315	PWY-6722	candicidin biosynthesis
APS56_RS14315	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
APS56_RS14320	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS14320	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
APS56_RS14320	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS14320	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS14320	PWY-7385	1,3-propanediol biosynthesis (engineered)
APS56_RS14340	PWY-5839	menaquinol-7 biosynthesis
APS56_RS14340	PWY-5844	menaquinol-9 biosynthesis
APS56_RS14340	PWY-5849	menaquinol-6 biosynthesis
APS56_RS14340	PWY-5890	menaquinol-10 biosynthesis
APS56_RS14340	PWY-5891	menaquinol-11 biosynthesis
APS56_RS14340	PWY-5892	menaquinol-12 biosynthesis
APS56_RS14340	PWY-5895	menaquinol-13 biosynthesis
APS56_RS14400	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
APS56_RS14400	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
APS56_RS14400	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS14400	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS14400	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
APS56_RS14400	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
APS56_RS14400	PWY-7205	CMP phosphorylation
APS56_RS14400	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
APS56_RS14400	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS14400	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS14400	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
APS56_RS14400	PWY-7224	purine deoxyribonucleosides salvage
APS56_RS14400	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
APS56_RS14400	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
APS56_RS14435	PWY-6167	flavin biosynthesis II (archaea)
APS56_RS14435	PWY-6168	flavin biosynthesis III (fungi)
APS56_RS14485	PWY-2941	L-lysine biosynthesis II
APS56_RS14485	PWY-2942	L-lysine biosynthesis III
APS56_RS14485	PWY-5097	L-lysine biosynthesis VI
APS56_RS14540	PWY-7193	pyrimidine ribonucleosides salvage I
APS56_RS14720	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS14720	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS14720	PWY-6901	superpathway of glucose and xylose degradation
APS56_RS14720	PWY-7003	glycerol degradation to butanol
APS56_RS14725	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
APS56_RS14725	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
APS56_RS14765	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS14765	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS14785	PWY-6807	xyloglucan degradation II (exoglucanase)
APS56_RS14810	PWY-4981	L-proline biosynthesis II (from arginine)
APS56_RS14840	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS14840	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS14910	PWY-6004	glycine betaine biosynthesis V (from glycine)
APS56_RS14955	PWY-5958	acridone alkaloid biosynthesis
APS56_RS14955	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APS56_RS14955	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APS56_RS14960	PWY-5958	acridone alkaloid biosynthesis
APS56_RS14960	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
APS56_RS14960	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
APS56_RS14985	PWY-7242	D-fructuronate degradation
APS56_RS15025	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
APS56_RS15025	PWY-5491	diethylphosphate degradation
APS56_RS15080	PWY-7651	heparan sulfate degradation
APS56_RS15085	PWY-6986	alginate degradation
APS56_RS15085	PWY-7651	heparan sulfate degradation
APS56_RS15100	PWY-5530	sorbitol biosynthesis II
APS56_RS15100	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
APS56_RS15115	PWY-1042	glycolysis IV (plant cytosol)
APS56_RS15115	PWY-1622	formaldehyde assimilation I (serine pathway)
APS56_RS15115	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
APS56_RS15115	PWY-5484	glycolysis II (from fructose 6-phosphate)
APS56_RS15115	PWY-5723	Rubisco shunt
APS56_RS15115	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
APS56_RS15115	PWY-6886	1-butanol autotrophic biosynthesis
APS56_RS15115	PWY-6901	superpathway of glucose and xylose degradation
APS56_RS15115	PWY-7003	glycerol degradation to butanol
APS56_RS15115	PWY-7124	ethylene biosynthesis V (engineered)
APS56_RS15115	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
APS56_RS15200	PWY-6749	CMP-legionaminate biosynthesis I
APS56_RS15270	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
APS56_RS15270	PWY-5686	UMP biosynthesis
APS56_RS15270	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
APS56_RS15330	PWY-6482	diphthamide biosynthesis (archaea)
APS56_RS15330	PWY-7546	diphthamide biosynthesis (eukaryotes)
APS56_RS15355	PWY-6123	inosine-5'-phosphate biosynthesis I
APS56_RS15355	PWY-6124	inosine-5'-phosphate biosynthesis II
APS56_RS15355	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
APS56_RS15355	PWY-7234	inosine-5'-phosphate biosynthesis III
APS56_RS15395	PWY-7255	ergothioneine biosynthesis I (bacteria)
APS56_RS15485	PWY-5663	tetrahydrobiopterin biosynthesis I
APS56_RS15485	PWY-5664	tetrahydrobiopterin biosynthesis II
APS56_RS15485	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
APS56_RS15485	PWY-6703	preQ<sub>0</sub> biosynthesis
APS56_RS15485	PWY-6983	tetrahydrobiopterin biosynthesis III
APS56_RS15485	PWY-7442	drosopterin and aurodrosopterin biosynthesis
APS56_RS15540	PWY-6807	xyloglucan degradation II (exoglucanase)
APS56_RS15545	PWY-6807	xyloglucan degradation II (exoglucanase)
APS56_RS15855	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
APS56_RS15855	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
APS56_RS16105	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
APS56_RS16105	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
APS56_RS16135	PWY-5392	reductive TCA cycle II
APS56_RS16135	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
APS56_RS16135	PWY-5690	TCA cycle II (plants and fungi)
APS56_RS16135	PWY-5913	TCA cycle VI (obligate autotrophs)
APS56_RS16135	PWY-6728	methylaspartate cycle
APS56_RS16135	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
APS56_RS16135	PWY-7254	TCA cycle VII (acetate-producers)
APS56_RS16135	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
APS56_RS16155	PWY-4202	arsenate detoxification I (glutaredoxin)
APS56_RS16155	PWY-4621	arsenate detoxification II (glutaredoxin)
APS56_RS16250	PWY-723	alkylnitronates degradation
APS56_RS16270	PWY-2941	L-lysine biosynthesis II
APS56_RS16270	PWY-5097	L-lysine biosynthesis VI
APS56_RS16295	PWY-2201	folate transformations I
APS56_RS16325	PWY-5525	D-glucuronate degradation I
APS56_RS16370	PWY-2941	L-lysine biosynthesis II
APS56_RS16370	PWY-2942	L-lysine biosynthesis III
APS56_RS16370	PWY-5097	L-lysine biosynthesis VI
APS56_RS16400	PWY-5971	palmitate biosynthesis II (bacteria and plants)
APS56_RS16400	PWY-5973	<i>cis</i>-vaccenate biosynthesis
APS56_RS16400	PWY-5989	stearate biosynthesis II (bacteria and plants)
APS56_RS16400	PWY-6113	superpathway of mycolate biosynthesis
APS56_RS16400	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
APS56_RS16400	PWY-6519	8-amino-7-oxononanoate biosynthesis I
APS56_RS16400	PWY-7663	gondoate biosynthesis (anaerobic)
APS56_RS16400	PWY-7664	oleate biosynthesis IV (anaerobic)
APS56_RS16400	PWYG-321	mycolate biosynthesis
APS56_RS16580	PWY-5674	nitrate reduction IV (dissimilatory)
APS56_RS16610	PWY-5747	2-methylcitrate cycle II
