APS56_RS06060 152c054c0899d05a518113a9fd7bcfaa 742 Pfam PF07940 Heparinase II/III-like protein 335 503 6.0E-25 T 20-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 APS56_RS06060 152c054c0899d05a518113a9fd7bcfaa 742 SUPERFAMILY SSF48230 47 274 3.11E-19 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SUPERFAMILY SSF52540 17 310 7.97E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 Gene3D G3DSA:3.40.50.300 769 925 3.7E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SMART SM00490 795 879 5.4E-17 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 Pfam PF03461 TRCF domain 986 1076 8.3E-26 T 20-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SUPERFAMILY SSF143517 970 1127 1.44E-35 T 20-04-2016 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SUPERFAMILY SSF141259 440 517 3.53E-18 T 20-04-2016 IPR003711 CarD-like/TRCF domain APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 Pfam PF02559 CarD-like/TRCF domain 449 544 1.2E-20 T 20-04-2016 IPR003711 CarD-like/TRCF domain APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 Gene3D G3DSA:3.40.50.300 556 755 1.3E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SMART SM01058 448 545 1.4E-31 T 20-04-2016 IPR003711 CarD-like/TRCF domain APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 160 1056 1.1E-302 T 20-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 Pfam PF00271 Helicase conserved C-terminal domain 776 878 1.8E-15 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1091 27.551 T 20-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 Pfam PF00270 DEAD/DEAH box helicase 594 733 1.3E-16 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SMART SM00982 983 1083 1.0E-27 T 20-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SUPERFAMILY SSF52540 751 959 4.23E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SUPERFAMILY SSF52540 338 427 1.54E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SMART SM00487 569 759 5.8E-33 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 PANTHER PTHR14025 367 1056 0.0 T 20-04-2016 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 Gene3D G3DSA:3.30.2060.10 145 221 1.0E-14 T 20-04-2016 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 PANTHER PTHR14025:SF21 367 1056 0.0 T 20-04-2016 APS56_RS10245 0e5db046106b4297773aa27f0b831b02 1130 SUPERFAMILY SSF52540 508 753 1.21E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 Gene3D G3DSA:3.30.2080.10 600 739 5.5E-63 T 20-04-2016 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 Gene3D G3DSA:1.20.1050.60 359 448 3.3E-34 T 20-04-2016 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 Gene3D G3DSA:1.20.1610.10 449 599 1.3E-60 T 20-04-2016 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 Pfam PF07971 Glycosyl hydrolase family 92 254 732 1.4E-172 T 20-04-2016 IPR012939 Glycosyl hydrolase family 92 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 SUPERFAMILY SSF48208 277 720 9.18E-40 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 PANTHER PTHR12143:SF22 399 737 1.8E-214 T 20-04-2016 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 PANTHER PTHR12143:SF22 7 383 1.8E-214 T 20-04-2016 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 Gene3D G3DSA:2.70.98.10 33 335 4.1E-101 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 PANTHER PTHR12143 399 737 1.8E-214 T 20-04-2016 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 PANTHER PTHR12143 7 383 1.8E-214 T 20-04-2016 APS56_RS02920 c3338a065cd9209269d1ddaf9fe52e84 743 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 6 737 3.8E-221 T 20-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APS56_RS03045 b007ee440da58407ec1909d99bd40831 394 SUPERFAMILY SSF49742 216 312 2.04E-14 T 20-04-2016 IPR008977 PHM/PNGase F domain GO:0003824 APS56_RS03045 b007ee440da58407ec1909d99bd40831 394 SUPERFAMILY SSF49742 341 372 2.04E-14 T 20-04-2016 IPR008977 PHM/PNGase F domain GO:0003824 APS56_RS03045 b007ee440da58407ec1909d99bd40831 394 Pfam PF09112 Peptide-N-glycosidase F, N terminal 28 205 1.9E-54 T 20-04-2016 IPR015196 Peptide-N-glycosidase F, N-terminal APS56_RS03045 b007ee440da58407ec1909d99bd40831 394 Pfam PF09113 Peptide-N-glycosidase F, C terminal 234 390 7.5E-46 T 20-04-2016 IPR015197 Peptide-N-glycosidase F, C-terminal APS56_RS03045 b007ee440da58407ec1909d99bd40831 394 Gene3D G3DSA:2.60.120.230 241 389 1.0E-18 T 20-04-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 APS56_RS03045 b007ee440da58407ec1909d99bd40831 394 Gene3D G3DSA:2.60.120.230 71 210 2.0E-34 T 20-04-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 APS56_RS03045 b007ee440da58407ec1909d99bd40831 394 SMART SM01290 28 207 4.3E-38 T 20-04-2016 IPR015196 Peptide-N-glycosidase F, N-terminal APS56_RS09290 2b42e9faf216a9c06edb0ee364eda160 530 Pfam PF00916 Sulfate permease family 6 379 1.6E-62 T 20-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APS56_RS09290 2b42e9faf216a9c06edb0ee364eda160 530 PANTHER PTHR11814:SF123 1 503 2.0E-164 T 20-04-2016 APS56_RS09290 2b42e9faf216a9c06edb0ee364eda160 530 PANTHER PTHR11814 1 503 2.0E-164 T 20-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 ProDom PD004169 PRECURSOR CYSTEINE STREPTOCOCCAL STREPTOPAIN PROTEINASE PROTEASE THIOL B STREPTOCOCCUS EXOTOXIN 34 246 1.0E-10 T 20-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 41 65 8.5E-7 T 20-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 113 129 8.5E-7 T 20-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 PRINTS PR00797 Streptopain (C10) cysteine protease family signature 223 244 8.5E-7 T 20-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 347 497 4.4E-19 T 20-04-2016 APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 Gene3D G3DSA:2.60.120.200 398 471 6.1E-5 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 573 650 9.5E-11 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 SUPERFAMILY SSF54001 34 234 7.98E-29 T 20-04-2016 APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 SUPERFAMILY SSF49899 320 497 4.66E-15 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS00975 b87e324d4fb385e7cdf7d3161d658c72 650 Pfam PF01640 Peptidase C10 family 37 222 3.1E-29 T 20-04-2016 IPR000200 Peptidase C10, streptopain GO:0006508|GO:0008234 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 PIRSF PIRSF000349 1 202 5.3E-80 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 93 197 1.0E-39 T 20-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.7E-25 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 3.7E-25 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 PRINTS PR01703 Manganese superoxide dismutase signature 68 81 3.7E-25 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.7E-25 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 3.7E-25 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 20-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 SUPERFAMILY SSF54719 88 201 7.33E-44 T 20-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 PANTHER PTHR11404 1 202 5.7E-105 T 20-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 Gene3D G3DSA:1.10.287.990 20 84 3.3E-28 T 20-04-2016 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 84 1.1E-31 T 20-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS11380 e9e1270c9c9cd4e714d7fd51528c3d34 202 SUPERFAMILY SSF46609 1 86 2.49E-34 T 20-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 289 2.3E-123 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 PIRSF PIRSF001553 1 290 3.4E-122 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 SUPERFAMILY SSF51735 1 122 4.32E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 Gene3D G3DSA:3.40.50.261 120 288 2.5E-64 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 SMART SM00881 4 100 1.6E-36 T 20-04-2016 IPR003781 CoA-binding GO:0048037 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 Pfam PF00549 CoA-ligase 151 268 3.5E-13 T 20-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 237 250 - T 20-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 PANTHER PTHR11117 1 290 2.5E-157 T 20-04-2016 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 SUPERFAMILY SSF52210 123 287 7.46E-51 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 PRINTS PR01798 Succinyl-CoA synthase signature 241 258 2.6E-27 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.6E-27 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.6E-27 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.6E-27 T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 20-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 Gene3D G3DSA:3.40.50.720 2 119 1.3E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02010 ee147de2c2994325be1308ed048acdd4 290 Pfam PF02629 CoA binding domain 6 99 1.2E-29 T 20-04-2016 IPR003781 CoA-binding GO:0048037 APS56_RS08390 af9f72383a0ccfa3070da53ee0b3dc38 204 PANTHER PTHR10513 1 201 7.7E-82 T 20-04-2016 APS56_RS08390 af9f72383a0ccfa3070da53ee0b3dc38 204 Pfam PF01712 Deoxynucleoside kinase 3 199 3.9E-59 T 20-04-2016 IPR031314 Deoxynucleoside kinase domain APS56_RS08390 af9f72383a0ccfa3070da53ee0b3dc38 204 PIRSF PIRSF000705 1 203 9.0E-63 T 20-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 APS56_RS08390 af9f72383a0ccfa3070da53ee0b3dc38 204 SUPERFAMILY SSF52540 1 200 8.77E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08390 af9f72383a0ccfa3070da53ee0b3dc38 204 PANTHER PTHR10513:SF17 1 201 7.7E-82 T 20-04-2016 APS56_RS08390 af9f72383a0ccfa3070da53ee0b3dc38 204 Gene3D G3DSA:3.40.50.300 1 197 7.1E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14670 1c4dbed4d142eaaead8055baecea8314 322 PANTHER PTHR22935 6 316 2.1E-61 T 20-04-2016 APS56_RS14670 1c4dbed4d142eaaead8055baecea8314 322 PANTHER PTHR22935:SF80 6 316 2.1E-61 T 20-04-2016 APS56_RS14670 1c4dbed4d142eaaead8055baecea8314 322 Pfam PF00144 Beta-lactamase 23 309 9.0E-19 T 20-04-2016 IPR001466 Beta-lactamase-related APS56_RS14670 1c4dbed4d142eaaead8055baecea8314 322 Gene3D G3DSA:3.40.710.10 9 315 2.0E-40 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS14670 1c4dbed4d142eaaead8055baecea8314 322 SUPERFAMILY SSF56601 10 317 1.92E-60 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 PANTHER PTHR11079:SF10 1 218 5.8E-51 T 20-04-2016 APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 SUPERFAMILY SSF53597 143 308 6.54E-38 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 2 297 1.1E-81 T 20-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 44 84 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 Gene3D G3DSA:3.40.430.10 145 314 5.5E-45 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 SUPERFAMILY SSF53927 2 141 2.58E-39 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 Pfam PF01872 RibD C-terminal domain 143 295 3.1E-28 T 20-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 Gene3D G3DSA:3.40.140.10 2 144 2.1E-29 T 20-04-2016 APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 PANTHER PTHR11079 1 218 5.8E-51 T 20-04-2016 APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 PIRSF PIRSF006769 1 325 5.7E-97 T 20-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APS56_RS16325 a39a8cc66d5437ac9ed77f1ce0ddf000 327 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 95 1.5E-15 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 PIRSF PIRSF001092 17 465 6.7E-110 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 Pfam PF01120 Alpha-L-fucosidase 26 340 6.2E-89 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 SUPERFAMILY SSF51445 24 343 1.05E-97 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 387 458 1.9E-6 T 20-04-2016 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 SMART SM00812 20 416 3.5E-106 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 PANTHER PTHR10030 29 357 1.0E-71 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 Gene3D G3DSA:3.20.20.80 25 343 2.7E-97 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 PRINTS PR00741 Glycosyl hydrolase family 29 signature 101 117 3.6E-17 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 PRINTS PR00741 Glycosyl hydrolase family 29 signature 293 314 3.6E-17 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 PRINTS PR00741 Glycosyl hydrolase family 29 signature 326 348 3.6E-17 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10060 f1744ee6e756f4444f30ed7b1a892e6d 471 Gene3D G3DSA:2.60.40.1180 389 464 3.1E-7 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS15855 29e5ce8385d23e39d91788fd510a7c46 436 Gene3D G3DSA:3.65.10.10 228 435 7.4E-48 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APS56_RS15855 29e5ce8385d23e39d91788fd510a7c46 436 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 435 33.587 T 20-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS15855 29e5ce8385d23e39d91788fd510a7c46 436 PANTHER PTHR21090 1 436 1.3E-127 T 20-04-2016 APS56_RS15855 29e5ce8385d23e39d91788fd510a7c46 436 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 425 7.9E-61 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APS56_RS15855 29e5ce8385d23e39d91788fd510a7c46 436 SUPERFAMILY SSF55205 1 435 5.72E-101 T 20-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APS56_RS15855 29e5ce8385d23e39d91788fd510a7c46 436 Gene3D G3DSA:3.65.10.10 21 227 5.6E-50 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APS56_RS15855 29e5ce8385d23e39d91788fd510a7c46 436 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 434 2.6E-132 T 20-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 182 248 2.9E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 SMART SM00387 289 399 1.9E-18 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 SUPERFAMILY SSF55781 31 163 3.26E-21 T 20-04-2016 IPR029016 GAF domain-like APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 341 4.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 379 4.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 398 4.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 Gene3D G3DSA:3.30.565.10 235 398 1.7E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 SMART SM00388 181 249 6.5E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 PANTHER PTHR24423 160 397 1.4E-49 T 20-04-2016 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 Gene3D G3DSA:3.30.450.40 33 165 2.3E-7 T 20-04-2016 IPR029016 GAF domain-like APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 SUPERFAMILY SSF55874 239 398 1.44E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 Gene3D G3DSA:1.10.287.130 173 234 3.2E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 SUPERFAMILY SSF47384 168 247 1.69E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 Pfam PF01590 GAF domain 40 156 2.0E-5 T 20-04-2016 IPR003018 GAF domain GO:0005515 APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 398 8.2E-19 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12970 feaf6a9066a74b9629b56fb9ed78478d 399 SMART SM00065 26 169 0.0017 T 20-04-2016 IPR003018 GAF domain GO:0005515 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 150 498 1.7E-109 T 20-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 327 340 1.4E-36 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 305 323 1.4E-36 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 173 194 1.4E-36 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 144 161 1.4E-36 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 102 122 1.4E-36 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 480 497 1.4E-36 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PRINTS PR00738 Glycosyl hydrolase family 20 signature 462 478 1.4E-36 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 SMART SM00758 618 752 2.5E-7 T 20-04-2016 IPR011658 PA14 domain APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 19 146 1.5E-21 T 20-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 Pfam PF13287 Fn3 associated 554 595 1.6E-11 T 20-04-2016 IPR026876 Fn3 associated repeat APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 Gene3D G3DSA:3.20.20.80 148 554 3.1E-125 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 Pfam PF07691 PA14 domain 649 726 1.5E-10 T 20-04-2016 IPR011658 PA14 domain APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PANTHER PTHR22600 1 210 2.5E-205 T 20-04-2016 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PANTHER PTHR22600 244 610 2.5E-205 T 20-04-2016 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 Gene3D G3DSA:2.60.40.320 555 595 1.7E-5 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 SUPERFAMILY SSF51445 150 511 4.81E-114 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 Gene3D G3DSA:3.30.379.10 11 147 1.7E-32 T 20-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 Gene3D G3DSA:3.90.182.10 658 751 3.2E-17 T 20-04-2016 IPR011658 PA14 domain APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 SUPERFAMILY SSF55545 16 149 2.69E-25 T 20-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PANTHER PTHR22600:SF21 1 210 2.5E-205 T 20-04-2016 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 PANTHER PTHR22600:SF21 244 610 2.5E-205 T 20-04-2016 APS56_RS02930 ce6780d7d6855526e0195409813cd3ab 756 SUPERFAMILY SSF56988 657 729 1.83E-12 T 20-04-2016 APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 PANTHER PTHR10666 1 70 2.9E-49 T 20-04-2016 APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 88 153 1.2E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 SUPERFAMILY SSF54236 1 73 2.76E-26 T 20-04-2016 IPR029071 Ubiquitin-related domain APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 Gene3D G3DSA:3.10.20.90 1 72 1.9E-32 T 20-04-2016 APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 SMART SM00213 1 72 1.5E-24 T 20-04-2016 IPR000626 Ubiquitin domain GO:0005515 APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 PRINTS PR00348 Ubiquitin signature 53 74 1.0E-20 T 20-04-2016 IPR019956 Ubiquitin APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 PRINTS PR00348 Ubiquitin signature 11 31 1.0E-20 T 20-04-2016 IPR019956 Ubiquitin APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 PRINTS PR00348 Ubiquitin signature 32 52 1.0E-20 T 20-04-2016 IPR019956 Ubiquitin APS56_RS14420 4cd90d33a682580f1bee355a541578d5 154 Pfam PF00240 Ubiquitin family 3 70 4.3E-25 T 20-04-2016 IPR000626 Ubiquitin domain GO:0005515 APS56_RS05005 9b8d2344b735d7917dc23217285466b8 142 Gene3D G3DSA:3.10.50.40 3 70 1.2E-33 T 20-04-2016 APS56_RS05005 9b8d2344b735d7917dc23217285466b8 142 Gene3D G3DSA:3.10.50.40 124 142 1.2E-33 T 20-04-2016 APS56_RS05005 9b8d2344b735d7917dc23217285466b8 142 SUPERFAMILY SSF54534 3 142 4.32E-41 T 20-04-2016 APS56_RS05005 9b8d2344b735d7917dc23217285466b8 142 PANTHER PTHR10516 2 73 1.2E-21 T 20-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APS56_RS05005 9b8d2344b735d7917dc23217285466b8 142 PANTHER PTHR10516 131 141 1.2E-21 T 20-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APS56_RS05005 9b8d2344b735d7917dc23217285466b8 142 PANTHER PTHR10516:SF281 2 73 1.2E-21 T 20-04-2016 APS56_RS05005 9b8d2344b735d7917dc23217285466b8 142 PANTHER PTHR10516:SF281 131 141 1.2E-21 T 20-04-2016 APS56_RS05005 9b8d2344b735d7917dc23217285466b8 142 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 138 1.3E-23 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APS56_RS14430 76654345350195ec310e2a98bf11ff91 256 Gene3D G3DSA:1.25.40.10 129 250 1.6E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14430 76654345350195ec310e2a98bf11ff91 256 SUPERFAMILY SSF48452 119 239 5.69E-15 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14430 76654345350195ec310e2a98bf11ff91 256 Pfam PF13174 Tetratricopeptide repeat 136 158 0.17 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14430 76654345350195ec310e2a98bf11ff91 256 Pfam PF13432 Tetratricopeptide repeat 173 233 6.0E-6 T 20-04-2016 APS56_RS12465 bd3db57df54df707fea43aea214c1a8e 191 PANTHER PTHR30335 1 191 3.9E-97 T 20-04-2016 APS56_RS12465 bd3db57df54df707fea43aea214c1a8e 191 PANTHER PTHR30335:SF0 1 191 3.9E-97 T 20-04-2016 APS56_RS12465 bd3db57df54df707fea43aea214c1a8e 191 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 1 191 1.7E-78 T 20-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APS56_RS12465 bd3db57df54df707fea43aea214c1a8e 191 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 1 191 24.019 T 20-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APS56_RS12465 bd3db57df54df707fea43aea214c1a8e 191 PIRSF PIRSF006102 1 191 2.8E-54 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APS56_RS12465 bd3db57df54df707fea43aea214c1a8e 191 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 190 2.5E-57 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 Gene3D G3DSA:1.10.260.40 3 59 2.0E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.4E-12 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 SUPERFAMILY SSF53822 64 335 7.07E-68 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 Gene3D G3DSA:3.40.50.2300 173 335 6.6E-50 T 20-04-2016 APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 Gene3D G3DSA:3.40.50.2300 60 172 3.5E-30 T 20-04-2016 APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 SUPERFAMILY SSF47413 2 61 1.59E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 Pfam PF13377 Periplasmic binding protein-like domain 172 335 2.6E-33 T 20-04-2016 APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 PANTHER PTHR30146 3 337 2.8E-100 T 20-04-2016 APS56_RS04850 c8f20a54694f29d40e1f8cb2cd6129b7 338 SMART SM00354 3 73 2.5E-21 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 SMART SM00493 3 103 8.8E-30 T 20-04-2016 IPR006171 Toprim domain APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Pfam PF01131 DNA topoisomerase 507 562 3.9E-9 T 20-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Pfam PF01131 DNA topoisomerase 128 478 1.5E-108 T 20-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PANTHER PTHR11390 1 480 2.7E-277 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PANTHER PTHR11390 510 607 2.7E-277 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Gene3D G3DSA:2.70.20.10 191 301 1.7E-23 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Gene3D G3DSA:2.70.20.10 305 432 4.9E-31 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Gene3D G3DSA:1.10.460.10 433 478 5.0E-54 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Gene3D G3DSA:1.10.460.10 133 186 5.0E-54 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Gene3D G3DSA:1.10.460.10 510 575 5.0E-54 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Gene3D G3DSA:3.40.50.140 1 132 1.5E-46 T 20-04-2016 IPR006171 Toprim domain APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PANTHER PTHR11390:SF27 1 480 2.7E-277 T 20-04-2016 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PANTHER PTHR11390:SF27 510 607 2.7E-277 T 20-04-2016 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 274 288 - T 20-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 478 9.3E-197 T 20-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Pfam PF13368 Topoisomerase C-terminal repeat 655 701 1.2E-14 T 20-04-2016 IPR025589 Topoisomerase C-terminal repeat APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Pfam PF13368 Topoisomerase C-terminal repeat 712 755 1.1E-5 T 20-04-2016 IPR025589 Topoisomerase C-terminal repeat APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Pfam PF13368 Topoisomerase C-terminal repeat 591 650 3.0E-13 T 20-04-2016 IPR025589 Topoisomerase C-terminal repeat APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Pfam PF01751 Toprim domain 5 113 3.4E-29 T 20-04-2016 IPR006171 Toprim domain APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 SMART SM00436 104 192 7.1E-46 T 20-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 SUPERFAMILY SSF56712 3 478 3.27E-183 T 20-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 SUPERFAMILY SSF56712 510 598 3.27E-183 T 20-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 SMART SM00437 237 524 1.8E-95 T 20-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 662 50.991 T 20-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 279 288 1.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 351 367 1.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07200 cec9f5b1042562a765f4a17f14ffc030 830 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 456 470 1.4E-34 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Gene3D G3DSA:2.40.170.20 552 933 2.4E-57 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Gene3D G3DSA:2.40.170.20 1073 1160 2.4E-57 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Gene3D G3DSA:2.40.170.20 349 373 2.4E-57 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Gene3D G3DSA:2.40.170.20 456 520 2.4E-57 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Gene3D G3DSA:2.40.170.20 1002 1027 2.4E-57 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532 134 300 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532 640 667 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532 443 545 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532 316 412 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532 987 1158 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532 697 963 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 SUPERFAMILY SSF49464 135 216 2.88E-17 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 137 1160 6.4E-261 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532:SF57 134 300 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532:SF57 640 667 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532:SF57 443 545 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532:SF57 316 412 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532:SF57 987 1158 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 PANTHER PTHR11532:SF57 697 963 2.4E-246 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Pfam PF13715 CarboxypepD_reg-like domain 137 218 7.0E-18 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Gene3D G3DSA:2.60.40.1120 137 220 4.1E-12 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Pfam PF07715 TonB-dependent Receptor Plug Domain 226 349 3.4E-22 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 Gene3D G3DSA:2.170.130.10 221 348 2.4E-22 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 325 355 2.4E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 SUPERFAMILY SSF56935 214 373 3.48E-93 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 SUPERFAMILY SSF56935 447 535 3.48E-93 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 SUPERFAMILY SSF56935 1078 1160 3.48E-93 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 SUPERFAMILY SSF56935 993 1037 3.48E-93 T 20-04-2016 APS56_RS14605 dbd7d343b91cbb0de6a78f199728b064 1160 SUPERFAMILY SSF56935 569 908 3.48E-93 T 20-04-2016 APS56_RS01875 626d40ec8e63f7f78f43c1b737ed9edb 96 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 91 2.7E-30 T 20-04-2016 IPR023845 Domain of unknown function DUF3817, transmembrane APS56_RS01875 626d40ec8e63f7f78f43c1b737ed9edb 96 PANTHER PTHR40077 1 91 1.9E-13 T 20-04-2016 APS56_RS01875 626d40ec8e63f7f78f43c1b737ed9edb 96 Pfam PF12823 Domain of unknown function (DUF3817) 6 91 1.8E-25 T 20-04-2016 IPR023845 Domain of unknown function DUF3817, transmembrane APS56_RS13995 c459336bcdcd4cebf23f30288cf914a0 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.2E-55 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APS56_RS13995 c459336bcdcd4cebf23f30288cf914a0 122 SUPERFAMILY SSF50193 1 122 6.15E-51 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APS56_RS13995 c459336bcdcd4cebf23f30288cf914a0 122 PANTHER PTHR11761 1 122 6.2E-77 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APS56_RS13995 c459336bcdcd4cebf23f30288cf914a0 122 SMART SM01374 1 122 3.9E-88 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APS56_RS13995 c459336bcdcd4cebf23f30288cf914a0 122 Gene3D G3DSA:2.40.150.20 1 122 5.4E-54 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APS56_RS13995 c459336bcdcd4cebf23f30288cf914a0 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 20-04-2016 IPR019972 Ribosomal protein L14P, conserved site APS56_RS13995 c459336bcdcd4cebf23f30288cf914a0 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.786 T 20-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APS56_RS13995 c459336bcdcd4cebf23f30288cf914a0 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.9E-55 T 20-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 Gene3D G3DSA:2.170.130.10 97 212 1.6E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 PANTHER PTHR11532:SF57 8 358 0.0 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 PANTHER PTHR11532:SF57 525 1032 0.0 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 13 1034 1.8E-287 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 SUPERFAMILY SSF56935 949 1034 3.39E-62 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 SUPERFAMILY SSF56935 432 784 3.39E-62 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 SUPERFAMILY SSF56935 857 901 3.39E-62 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 SUPERFAMILY SSF56935 295 392 3.39E-62 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 SUPERFAMILY SSF56935 89 235 3.39E-62 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 Pfam PF13715 CarboxypepD_reg-like domain 12 93 1.2E-15 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 Pfam PF07715 TonB-dependent Receptor Plug Domain 101 209 1.5E-16 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 PANTHER PTHR11532:SF57 389 420 0.0 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 Gene3D G3DSA:2.60.40.1120 12 96 1.9E-11 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 PANTHER PTHR11532 389 420 0.0 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 SUPERFAMILY SSF49464 11 91 1.83E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 185 215 2.3E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 PANTHER PTHR11532 8 358 0.0 T 20-04-2016 APS56_RS09975 e6a1fa23d5b7175fec6af55f655592f5 1034 PANTHER PTHR11532 525 1032 0.0 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 Gene3D G3DSA:2.70.98.10 21 346 6.2E-92 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 Pfam PF07971 Glycosyl hydrolase family 92 265 738 8.5E-167 T 20-04-2016 IPR012939 Glycosyl hydrolase family 92 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 SUPERFAMILY SSF48208 286 724 1.12E-27 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 Gene3D G3DSA:1.20.1610.10 463 600 6.5E-48 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 PANTHER PTHR12143 410 737 1.8E-132 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 PANTHER PTHR12143 244 394 1.8E-132 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 PANTHER PTHR12143 1 221 1.8E-132 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 19 738 3.0E-220 T 20-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 Gene3D G3DSA:3.30.2080.10 601 738 2.1E-49 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 Gene3D G3DSA:1.20.1050.60 370 459 6.2E-36 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 PANTHER PTHR12143:SF22 410 737 1.8E-132 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 PANTHER PTHR12143:SF22 244 394 1.8E-132 T 20-04-2016 APS56_RS03050 94f14d04bb17c28d971d618648cd074d 739 PANTHER PTHR12143:SF22 1 221 1.8E-132 T 20-04-2016 APS56_RS04600 5124f8299a219b20c43f72d52cde7d43 509 PANTHER PTHR10342 1 508 2.7E-139 T 20-04-2016 APS56_RS04600 5124f8299a219b20c43f72d52cde7d43 509 ProSitePatterns PS00523 Sulfatases signature 1. 79 91 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS04600 5124f8299a219b20c43f72d52cde7d43 509 Pfam PF00884 Sulfatase 32 374 1.1E-62 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS04600 5124f8299a219b20c43f72d52cde7d43 509 PANTHER PTHR10342:SF199 1 508 2.7E-139 T 20-04-2016 APS56_RS04600 5124f8299a219b20c43f72d52cde7d43 509 Gene3D G3DSA:3.30.1120.10 414 485 6.3E-18 T 20-04-2016 APS56_RS04600 5124f8299a219b20c43f72d52cde7d43 509 ProSitePatterns PS00149 Sulfatases signature 2. 127 137 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS04600 5124f8299a219b20c43f72d52cde7d43 509 SUPERFAMILY SSF53649 32 482 1.74E-117 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS04600 5124f8299a219b20c43f72d52cde7d43 509 Gene3D G3DSA:3.40.720.10 32 413 4.2E-108 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS13275 0792a126343316fb416026a553d0843b 98 Gene3D G3DSA:3.40.30.10 9 97 1.7E-21 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS13275 0792a126343316fb416026a553d0843b 98 Pfam PF00085 Thioredoxin 4 96 1.7E-15 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 APS56_RS13275 0792a126343316fb416026a553d0843b 98 SUPERFAMILY SSF52833 3 97 3.07E-23 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS13275 0792a126343316fb416026a553d0843b 98 PANTHER PTHR10438 2 91 1.6E-15 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APS56_RS13275 0792a126343316fb416026a553d0843b 98 PANTHER PTHR10438:SF280 2 91 1.6E-15 T 20-04-2016 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 PANTHER PTHR30562:SF1 3 594 6.9E-210 T 20-04-2016 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 577 3.5E-159 T 20-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 595 25.491 T 20-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 SMART SM00465 16 97 1.6E-21 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 SUPERFAMILY SSF47781 518 597 2.1E-18 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 Gene3D G3DSA:3.40.1440.10 16 95 8.0E-12 T 20-04-2016 IPR027299 GIY-YIG domain APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 Gene3D G3DSA:1.10.150.20 545 595 1.2E-15 T 20-04-2016 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 Pfam PF14520 Helix-hairpin-helix domain 545 586 9.9E-6 T 20-04-2016 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 Gene3D G3DSA:4.10.860.10 188 243 2.0E-8 T 20-04-2016 IPR001943 UVR domain GO:0005515 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 Pfam PF01541 GIY-YIG catalytic domain 18 92 1.0E-11 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 SUPERFAMILY SSF46600 197 244 1.7E-7 T 20-04-2016 IPR001943 UVR domain GO:0005515 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 PANTHER PTHR30562 3 594 6.9E-210 T 20-04-2016 APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 SUPERFAMILY SSF82771 15 99 3.92E-24 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APS56_RS12130 e6b7ccb0ff1be5d6b1f17ef4159aaa18 597 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 382 530 7.3E-50 T 20-04-2016 IPR001162 UvrC family homology region APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 PANTHER PTHR10909 1 379 2.6E-175 T 20-04-2016 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 378 8.0E-49 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 SUPERFAMILY SSF56645 1 242 2.09E-86 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 PANTHER PTHR10909:SF305 1 379 2.6E-175 T 20-04-2016 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 SUPERFAMILY SSF47203 229 379 4.83E-55 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 2.2E-36 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 Gene3D G3DSA:1.20.140.10 217 379 1.1E-69 T 20-04-2016 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 Gene3D G3DSA:2.40.110.10 121 216 5.5E-40 T 20-04-2016 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 Gene3D G3DSA:1.10.540.10 1 120 1.6E-41 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS13770 00c1a841dc93906b5b72980408fb18c1 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 9.5E-29 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 Pfam PF08281 Sigma-70, region 4 95 146 9.2E-13 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 SUPERFAMILY SSF88946 6 89 1.18E-16 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 SUPERFAMILY SSF88659 88 148 3.05E-11 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 Pfam PF04542 Sigma-70 region 2 9 71 5.1E-10 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 Gene3D G3DSA:1.10.1740.10 6 92 3.8E-18 T 20-04-2016 APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 Gene3D G3DSA:1.10.10.10 93 149 6.6E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 PANTHER PTHR30173 3 167 2.0E-35 T 20-04-2016 APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 PANTHER PTHR30173:SF23 3 167 2.0E-35 T 20-04-2016 APS56_RS05080 56909c74475d8828c0e3e9a56fb00fdd 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 149 4.2E-21 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 SUPERFAMILY SSF52467 190 312 5.67E-44 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 PIRSF PIRSF000089 1 317 4.2E-86 T 20-04-2016 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 Gene3D G3DSA:3.40.50.620 1 178 3.2E-29 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 Gene3D G3DSA:3.40.50.1220 186 313 7.6E-51 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 SUPERFAMILY SSF52402 1 182 3.49E-35 T 20-04-2016 APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 Pfam PF01012 Electron transfer flavoprotein domain 3 173 6.7E-24 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 PANTHER PTHR10909 137 311 1.7E-37 T 20-04-2016 APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 PANTHER PTHR10909:SF294 137 311 1.7E-37 T 20-04-2016 APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 SMART SM00893 3 182 4.4E-12 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APS56_RS08815 72e5a80b203f0e327cb65b8d6f14308f 319 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 193 275 4.3E-31 T 20-04-2016 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 SUPERFAMILY SSF51445 50 363 1.84E-79 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 PRINTS PR00741 Glycosyl hydrolase family 29 signature 116 132 2.0E-5 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 PRINTS PR00741 Glycosyl hydrolase family 29 signature 320 341 2.0E-5 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 Gene3D G3DSA:3.20.20.80 47 364 2.5E-82 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 SMART SM00812 43 367 3.2E-62 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 PIRSF PIRSF001092 11 367 4.2E-89 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 Pfam PF01120 Alpha-L-fucosidase 47 360 7.6E-71 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 PANTHER PTHR10030 53 179 4.6E-45 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS15580 089e96afa31b4ea824f9ac5ce96dd8c6 373 PANTHER PTHR10030 205 363 4.6E-45 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS08875 be4141f417c007b55ba752f9be2018ac 320 SUPERFAMILY SSF46689 263 316 5.38E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS08875 be4141f417c007b55ba752f9be2018ac 320 Pfam PF12833 Helix-turn-helix domain 234 314 4.8E-15 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS08875 be4141f417c007b55ba752f9be2018ac 320 SMART SM00342 227 313 1.3E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS08875 be4141f417c007b55ba752f9be2018ac 320 PANTHER PTHR11019 193 320 5.3E-13 T 20-04-2016 APS56_RS08875 be4141f417c007b55ba752f9be2018ac 320 PANTHER PTHR11019 111 158 5.3E-13 T 20-04-2016 APS56_RS08875 be4141f417c007b55ba752f9be2018ac 320 Gene3D G3DSA:1.10.10.60 263 312 1.0E-10 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS08875 be4141f417c007b55ba752f9be2018ac 320 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 309 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS12010 1bd99b9a828633808c23f4b8a0fa3f37 812 Gene3D G3DSA:2.170.130.10 113 228 1.3E-22 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12010 1bd99b9a828633808c23f4b8a0fa3f37 812 Gene3D G3DSA:2.60.40.1120 28 112 4.4E-13 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS12010 1bd99b9a828633808c23f4b8a0fa3f37 812 Pfam PF13715 CarboxypepD_reg-like domain 28 114 8.3E-20 T 20-04-2016 APS56_RS12010 1bd99b9a828633808c23f4b8a0fa3f37 812 PANTHER PTHR30069 1 327 1.2E-33 T 20-04-2016 APS56_RS12010 1bd99b9a828633808c23f4b8a0fa3f37 812 Gene3D G3DSA:2.40.170.20 229 806 6.2E-38 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12010 1bd99b9a828633808c23f4b8a0fa3f37 812 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 227 4.5E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12010 1bd99b9a828633808c23f4b8a0fa3f37 812 SUPERFAMILY SSF49464 26 112 1.02E-15 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS12010 1bd99b9a828633808c23f4b8a0fa3f37 812 SUPERFAMILY SSF56935 110 806 1.36E-66 T 20-04-2016 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 Gene3D G3DSA:3.30.43.10 7 69 1.1E-19 T 20-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 SUPERFAMILY SSF56176 8 189 9.81E-44 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 Gene3D G3DSA:3.30.465.10 75 237 8.6E-52 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 SUPERFAMILY SSF56194 210 337 2.09E-43 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 Gene3D G3DSA:3.90.78.10 238 337 6.0E-38 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 Pfam PF01565 FAD binding domain 22 142 3.4E-14 T 20-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 PANTHER PTHR21071:SF6 1 336 9.0E-132 T 20-04-2016 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 337 1.9E-70 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 337 76.109 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 214 337 1.2E-31 T 20-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14765 3990627093e8ccb49811d4ad65465a4c 337 PANTHER PTHR21071 1 336 9.0E-132 T 20-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS05375 53cf3f176289ca296371074ff56a4ee0 356 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 12 352 3.4E-84 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS05375 53cf3f176289ca296371074ff56a4ee0 356 Gene3D G3DSA:3.40.640.10 10 236 3.5E-64 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS05375 53cf3f176289ca296371074ff56a4ee0 356 Gene3D G3DSA:3.90.1150.10 243 356 3.8E-14 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS05375 53cf3f176289ca296371074ff56a4ee0 356 PANTHER PTHR30244:SF9 1 356 1.6E-104 T 20-04-2016 APS56_RS05375 53cf3f176289ca296371074ff56a4ee0 356 PANTHER PTHR30244 1 356 1.6E-104 T 20-04-2016 APS56_RS05375 53cf3f176289ca296371074ff56a4ee0 356 PIRSF PIRSF000390 1 356 4.2E-90 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS05375 53cf3f176289ca296371074ff56a4ee0 356 SUPERFAMILY SSF53383 5 355 7.69E-85 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS04455 6e02134563b279b6bb3d293950095a51 354 SUPERFAMILY SSF56752 6 351 1.19E-95 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APS56_RS04455 6e02134563b279b6bb3d293950095a51 354 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 46 353 2.1E-97 T 20-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 APS56_RS04455 6e02134563b279b6bb3d293950095a51 354 Pfam PF01063 Amino-transferase class IV 72 311 5.3E-31 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APS56_RS04455 6e02134563b279b6bb3d293950095a51 354 PANTHER PTHR11825 9 353 7.3E-109 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APS56_RS04455 6e02134563b279b6bb3d293950095a51 354 PIRSF PIRSF006468 3 354 6.8E-109 T 20-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 APS56_RS04455 6e02134563b279b6bb3d293950095a51 354 ProSitePatterns PS00770 Aminotransferases class-IV signature. 232 261 - T 20-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 APS56_RS04455 6e02134563b279b6bb3d293950095a51 354 Gene3D G3DSA:3.30.470.10 4 175 6.5E-62 T 20-04-2016 APS56_RS04455 6e02134563b279b6bb3d293950095a51 354 Gene3D G3DSA:3.20.10.10 176 340 4.6E-52 T 20-04-2016 APS56_RS05980 fdf26ef5b2febd3f9aa1afc14a204a37 451 PANTHER PTHR22925 21 330 3.4E-54 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS05980 fdf26ef5b2febd3f9aa1afc14a204a37 451 Gene3D G3DSA:2.60.120.260 318 445 6.4E-10 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS05980 fdf26ef5b2febd3f9aa1afc14a204a37 451 SUPERFAMILY SSF49785 318 444 6.8E-7 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS05980 fdf26ef5b2febd3f9aa1afc14a204a37 451 Pfam PF16990 Carbohydrate binding module (family 35) 330 446 1.5E-14 T 20-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 APS56_RS05980 fdf26ef5b2febd3f9aa1afc14a204a37 451 Gene3D G3DSA:2.115.10.20 9 297 3.8E-66 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS05980 fdf26ef5b2febd3f9aa1afc14a204a37 451 PANTHER PTHR22925:SF37 21 330 3.4E-54 T 20-04-2016 APS56_RS05980 fdf26ef5b2febd3f9aa1afc14a204a37 451 SUPERFAMILY SSF75005 5 297 4.85E-61 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS05980 fdf26ef5b2febd3f9aa1afc14a204a37 451 Pfam PF04616 Glycosyl hydrolases family 43 20 295 2.0E-39 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS02200 317060d909207c532dcff9f5589c293c 364 SUPERFAMILY SSF55729 47 143 1.21E-7 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS02200 317060d909207c532dcff9f5589c293c 364 Gene3D G3DSA:3.40.630.30 53 142 1.9E-6 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS01820 d3fac5fd62aa6ddd524e231f88a0ba02 868 Gene3D G3DSA:3.40.390.10 477 564 2.6E-18 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS01820 d3fac5fd62aa6ddd524e231f88a0ba02 868 Gene3D G3DSA:3.40.390.10 303 416 2.6E-18 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS01820 d3fac5fd62aa6ddd524e231f88a0ba02 868 Pfam PF17148 Domain of unknown function (DUF5117) 119 308 5.1E-27 T 20-04-2016 IPR033413 Domain of unknown function DUF5117 APS56_RS01820 d3fac5fd62aa6ddd524e231f88a0ba02 868 PANTHER PTHR38478 1 865 7.5E-118 T 20-04-2016 APS56_RS01820 d3fac5fd62aa6ddd524e231f88a0ba02 868 Pfam PF16313 Met-zincin 476 789 1.8E-79 T 20-04-2016 IPR032534 Domian of unknown function DUF4953 APS56_RS01820 d3fac5fd62aa6ddd524e231f88a0ba02 868 SUPERFAMILY SSF55486 315 419 6.85E-21 T 20-04-2016 APS56_RS01820 d3fac5fd62aa6ddd524e231f88a0ba02 868 SUPERFAMILY SSF55486 476 563 6.85E-21 T 20-04-2016 APS56_RS10445 cb5856ee40aa91b6adee09fd625ea6bb 344 Hamap MF_00323 Ferrochelatase [hemH]. 1 337 34.262 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APS56_RS10445 cb5856ee40aa91b6adee09fd625ea6bb 344 Gene3D G3DSA:3.40.50.1400 2 194 1.4E-54 T 20-04-2016 APS56_RS10445 cb5856ee40aa91b6adee09fd625ea6bb 344 SUPERFAMILY SSF53800 2 336 1.12E-88 T 20-04-2016 APS56_RS10445 cb5856ee40aa91b6adee09fd625ea6bb 344 PANTHER PTHR11108 2 201 2.7E-93 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APS56_RS10445 cb5856ee40aa91b6adee09fd625ea6bb 344 PANTHER PTHR11108 224 334 2.7E-93 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APS56_RS10445 cb5856ee40aa91b6adee09fd625ea6bb 344 Pfam PF00762 Ferrochelatase 2 334 4.2E-100 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APS56_RS10445 cb5856ee40aa91b6adee09fd625ea6bb 344 TIGRFAM TIGR00109 hemH: ferrochelatase 2 207 4.3E-45 T 20-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APS56_RS10445 cb5856ee40aa91b6adee09fd625ea6bb 344 Gene3D G3DSA:3.40.50.1400 195 334 3.1E-33 T 20-04-2016 APS56_RS06595 66129d1188115cde61ea4f12ab0fb509 352 Gene3D G3DSA:3.40.47.10 184 351 2.1E-33 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS06595 66129d1188115cde61ea4f12ab0fb509 352 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 253 352 3.6E-14 T 20-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS06595 66129d1188115cde61ea4f12ab0fb509 352 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 129 202 3.7E-19 T 20-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS06595 66129d1188115cde61ea4f12ab0fb509 352 PANTHER PTHR34069 1 352 9.2E-63 T 20-04-2016 APS56_RS06595 66129d1188115cde61ea4f12ab0fb509 352 SUPERFAMILY SSF53901 2 352 6.93E-46 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS06595 66129d1188115cde61ea4f12ab0fb509 352 PANTHER PTHR34069:SF2 1 352 9.2E-63 T 20-04-2016 APS56_RS06595 66129d1188115cde61ea4f12ab0fb509 352 Gene3D G3DSA:3.40.47.10 1 183 9.7E-44 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 Gene3D G3DSA:2.30.40.10 237 324 7.1E-7 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 TIGRFAM TIGR01178 ade: adenine deaminase 4 536 4.0E-193 T 20-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 Pfam PF01979 Amidohydrolase family 40 320 4.1E-31 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 SUPERFAMILY SSF51338 6 43 5.76E-6 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 SUPERFAMILY SSF51338 289 324 5.76E-6 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 Hamap MF_01518 Adenine deaminase [ade]. 2 536 33.659 T 20-04-2016 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 Gene3D G3DSA:2.30.40.10 5 63 8.0E-6 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 Pfam PF13382 Adenine deaminase C-terminal domain 367 532 2.1E-61 T 20-04-2016 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 PANTHER PTHR11113 361 531 1.1E-154 T 20-04-2016 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 PANTHER PTHR11113 5 322 1.1E-154 T 20-04-2016 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 PANTHER PTHR11113:SF2 361 531 1.1E-154 T 20-04-2016 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 PANTHER PTHR11113:SF2 5 322 1.1E-154 T 20-04-2016 APS56_RS00865 e3ec9ec8eb8c62875db60e3fab09def7 539 SUPERFAMILY SSF51556 44 287 1.02E-30 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS12910 450b44f4f2f70fc107ee01736761fbb2 458 PANTHER PTHR34856:SF1 27 447 4.5E-207 T 20-04-2016 APS56_RS12910 450b44f4f2f70fc107ee01736761fbb2 458 PANTHER PTHR34856 27 447 4.5E-207 T 20-04-2016 APS56_RS12910 450b44f4f2f70fc107ee01736761fbb2 458 Pfam PF03916 Polysulphide reductase, NrfD 71 395 3.1E-19 T 20-04-2016 IPR005614 NrfD family APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 Pfam PF03786 D-mannonate dehydratase (UxuA) 6 391 4.3E-139 T 20-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 5 396 1.9E-177 T 20-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 SUPERFAMILY SSF51658 6 137 1.53E-77 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 SUPERFAMILY SSF51658 167 387 1.53E-77 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 Gene3D G3DSA:3.20.20.150 6 396 1.7E-142 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 PIRSF PIRSF016049 5 398 9.2E-168 T 20-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 PANTHER PTHR30387 6 397 3.8E-152 T 20-04-2016 APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 PANTHER PTHR30387:SF2 6 397 3.8E-152 T 20-04-2016 APS56_RS14985 e5f706ed79e1fc886df4d15d9c5182bd 398 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 398 191.366 T 20-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APS56_RS08720 f792ba197a51814b7e8fb831e2655685 454 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 5 454 4.2E-127 T 20-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APS56_RS08720 f792ba197a51814b7e8fb831e2655685 454 PANTHER PTHR13932 3 447 9.6E-158 T 20-04-2016 APS56_RS08720 f792ba197a51814b7e8fb831e2655685 454 PIRSF PIRSF000167 1 450 2.4E-136 T 20-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APS56_RS08720 f792ba197a51814b7e8fb831e2655685 454 SMART SM00729 51 273 8.3E-41 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS08720 f792ba197a51814b7e8fb831e2655685 454 Gene3D G3DSA:3.80.30.20 51 247 7.1E-29 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APS56_RS08720 f792ba197a51814b7e8fb831e2655685 454 PANTHER PTHR13932:SF6 3 447 9.6E-158 T 20-04-2016 APS56_RS08720 f792ba197a51814b7e8fb831e2655685 454 SUPERFAMILY SSF102114 2 438 5.89E-118 T 20-04-2016 APS56_RS08720 f792ba197a51814b7e8fb831e2655685 454 Pfam PF04055 Radical SAM superfamily 56 226 2.6E-16 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS00485 ec0b70419f263095b9442701f2568acb 317 PANTHER PTHR30473:SF1 1 317 4.8E-131 T 20-04-2016 APS56_RS00485 ec0b70419f263095b9442701f2568acb 317 SUPERFAMILY SSF52540 2 78 3.78E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00485 ec0b70419f263095b9442701f2568acb 317 SUPERFAMILY SSF52540 107 288 3.78E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00485 ec0b70419f263095b9442701f2568acb 317 Pfam PF02562 PhoH-like protein 108 311 2.2E-89 T 20-04-2016 IPR003714 PhoH-like protein GO:0005524 APS56_RS00485 ec0b70419f263095b9442701f2568acb 317 Gene3D G3DSA:3.40.50.300 108 311 1.1E-83 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00485 ec0b70419f263095b9442701f2568acb 317 PANTHER PTHR30473 1 317 4.8E-131 T 20-04-2016 APS56_RS07810 e19915150c0e544a9d7ef561b3c6d97c 445 PANTHER PTHR12147 26 214 4.5E-23 T 20-04-2016 APS56_RS07810 e19915150c0e544a9d7ef561b3c6d97c 445 Gene3D G3DSA:2.60.40.10 360 425 2.0E-5 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS07810 e19915150c0e544a9d7ef561b3c6d97c 445 Gene3D G3DSA:3.40.630.10 255 359 2.9E-41 T 20-04-2016 APS56_RS07810 e19915150c0e544a9d7ef561b3c6d97c 445 Gene3D G3DSA:3.40.630.10 27 221 2.9E-41 T 20-04-2016 APS56_RS07810 e19915150c0e544a9d7ef561b3c6d97c 445 SUPERFAMILY SSF49265 351 430 6.09E-7 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS07810 e19915150c0e544a9d7ef561b3c6d97c 445 SUPERFAMILY SSF53187 20 216 1.38E-43 T 20-04-2016 APS56_RS07810 e19915150c0e544a9d7ef561b3c6d97c 445 SUPERFAMILY SSF53187 245 354 1.38E-43 T 20-04-2016 APS56_RS07810 e19915150c0e544a9d7ef561b3c6d97c 445 Pfam PF04389 Peptidase family M28 109 319 1.8E-18 T 20-04-2016 IPR007484 Peptidase M28 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Pfam PF04560 RNA polymerase Rpb2, domain 7 1195 1269 1.1E-24 T 20-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Pfam PF04563 RNA polymerase beta subunit 24 459 3.2E-22 T 20-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 9 1270 11.871 T 20-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Pfam PF00562 RNA polymerase Rpb2, domain 6 680 1193 5.0E-155 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 SUPERFAMILY SSF64484 303 904 0.0 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 SUPERFAMILY SSF64484 1022 1269 0.0 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 SUPERFAMILY SSF64484 11 221 0.0 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Pfam PF04561 RNA polymerase Rpb2, domain 2 295 414 8.3E-22 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Pfam PF04561 RNA polymerase Rpb2, domain 2 148 217 4.3E-7 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:3.90.1100.10 405 551 1.3E-134 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:3.90.1100.10 18 148 1.3E-134 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:3.90.1100.10 621 674 1.3E-134 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 PANTHER PTHR20856 1 224 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 PANTHER PTHR20856 708 895 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 PANTHER PTHR20856 300 687 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 PANTHER PTHR20856 1017 1270 0.0 T 20-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 5 1268 0.0 T 20-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:3.90.1110.10 306 404 3.4E-58 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:3.90.1110.10 150 225 3.4E-58 T 20-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1046 1058 - T 20-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 PANTHER PTHR20856:SF20 1 224 0.0 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 PANTHER PTHR20856:SF20 708 895 0.0 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 PANTHER PTHR20856:SF20 300 687 0.0 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 PANTHER PTHR20856:SF20 1017 1270 0.0 T 20-04-2016 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:2.40.50.150 1028 1042 1.1E-52 T 20-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:2.40.50.150 792 902 1.1E-52 T 20-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Pfam PF10385 RNA polymerase beta subunit external 1 domain 551 618 4.2E-18 T 20-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:2.30.150.10 552 618 3.1E-16 T 20-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:2.40.270.10 1043 1171 2.1E-76 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:2.40.270.10 758 785 2.1E-76 T 20-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Pfam PF04565 RNA polymerase Rpb2, domain 3 473 541 2.4E-30 T 20-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05530 5cbd34eb260427ad476365fcb5e1b43a 1270 Gene3D G3DSA:2.40.50.100 677 757 7.7E-26 T 20-04-2016 APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 PANTHER PTHR22572 7 421 2.8E-144 T 20-04-2016 APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 Gene3D G3DSA:2.160.10.10 363 421 3.4E-4 T 20-04-2016 APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 98 106 - T 20-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 SUPERFAMILY SSF51161 288 421 9.31E-20 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 6 387 1.1E-129 T 20-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 Gene3D G3DSA:3.90.550.10 9 341 8.3E-70 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 PANTHER PTHR22572:SF79 7 421 2.8E-144 T 20-04-2016 APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 SUPERFAMILY SSF53448 4 273 2.12E-73 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 SUPERFAMILY SSF53448 368 384 2.12E-73 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 Pfam PF00483 Nucleotidyl transferase 8 269 2.8E-65 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 206 216 - T 20-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS11095 35538d0d7b6ecdc9ea296899c6a343ba 421 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 12 31 - T 20-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SUPERFAMILY SSF48452 245 347 3.8E-16 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SUPERFAMILY SSF48452 501 567 3.8E-16 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Gene3D G3DSA:1.25.40.10 104 225 1.2E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Gene3D G3DSA:1.25.40.10 407 515 3.6E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SUPERFAMILY SSF48452 428 531 2.35E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SUPERFAMILY SSF48452 719 752 4.11E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Gene3D G3DSA:1.25.40.10 725 860 4.3E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Gene3D G3DSA:1.25.40.10 294 406 3.1E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 208 241 44.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 501 534 6.1 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 140 173 300.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 425 458 190.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 244 277 240.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 314 347 19.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 832 865 60.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 759 792 260.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 174 207 190.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 279 312 43.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 539 572 0.14 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00028 611 644 220.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 PANTHER PTHR23083 101 344 2.2E-22 T 20-04-2016 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 PANTHER PTHR23083 498 686 2.2E-22 T 20-04-2016 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 PANTHER PTHR23083 949 991 2.2E-22 T 20-04-2016 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00671 501 532 20.0 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00671 174 205 16.0 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SMART SM00671 539 570 180.0 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Pfam PF13432 Tetratricopeptide repeat 505 567 5.0E-9 T 20-04-2016 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SUPERFAMILY SSF48452 540 685 4.11E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SUPERFAMILY SSF48452 105 231 2.66E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Pfam PF12895 Anaphase-promoting complex, cyclosome, subunit 3 276 339 4.3E-8 T 20-04-2016 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 SUPERFAMILY SSF48452 758 861 2.25E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Gene3D G3DSA:1.25.40.10 226 293 1.9E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Pfam PF13174 Tetratricopeptide repeat 612 641 4.8E-4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05725 7c4b51f8ee4ad81c658d61a83de7afac 1007 Gene3D G3DSA:1.25.40.10 516 684 3.9E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04310 2e17bd8644a5cffe56d8e76a53b69414 294 SUPERFAMILY SSF50182 124 189 8.5E-16 T 20-04-2016 IPR010920 LSM domain APS56_RS04310 2e17bd8644a5cffe56d8e76a53b69414 294 PANTHER PTHR30347 11 290 6.1E-54 T 20-04-2016 APS56_RS04310 2e17bd8644a5cffe56d8e76a53b69414 294 SUPERFAMILY SSF82689 195 290 4.71E-26 T 20-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APS56_RS04310 2e17bd8644a5cffe56d8e76a53b69414 294 Gene3D G3DSA:2.30.30.60 141 188 8.2E-14 T 20-04-2016 APS56_RS04310 2e17bd8644a5cffe56d8e76a53b69414 294 Gene3D G3DSA:3.30.70.100 196 278 9.8E-20 T 20-04-2016 APS56_RS04310 2e17bd8644a5cffe56d8e76a53b69414 294 Pfam PF00924 Mechanosensitive ion channel 84 280 1.0E-47 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APS56_RS04310 2e17bd8644a5cffe56d8e76a53b69414 294 SUPERFAMILY SSF82861 42 122 1.44E-10 T 20-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 SUPERFAMILY SSF55931 16 298 1.31E-89 T 20-04-2016 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Gene3D G3DSA:2.40.50.140 523 630 1.4E-26 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 14 457 7.8E-104 T 20-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Pfam PF00152 tRNA synthetases class II (D, K and N) 643 1086 1.3E-89 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 PRINTS PR01042 Aspartyl-tRNA synthetase signature 732 745 9.9E-22 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 PRINTS PR01042 Aspartyl-tRNA synthetase signature 715 727 9.9E-22 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 PRINTS PR01042 Aspartyl-tRNA synthetase signature 1003 1019 9.9E-22 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 PRINTS PR01042 Aspartyl-tRNA synthetase signature 1047 1061 9.9E-22 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Pfam PF02938 GAD domain 834 931 1.9E-20 T 20-04-2016 IPR029351 GAD domain APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Gene3D G3DSA:3.30.930.10 657 802 5.4E-97 T 20-04-2016 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Gene3D G3DSA:3.30.930.10 940 1113 5.4E-97 T 20-04-2016 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 524 1115 2.6E-192 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 SUPERFAMILY SSF50249 523 628 1.46E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Gene3D G3DSA:3.30.1360.30 803 939 1.7E-40 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Pfam PF02637 GatB domain 372 473 1.6E-7 T 20-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Pfam PF01336 OB-fold nucleic acid binding domain 540 625 5.7E-12 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 SUPERFAMILY SSF55681 642 837 1.6E-88 T 20-04-2016 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 SUPERFAMILY SSF55681 932 1086 1.6E-88 T 20-04-2016 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 SUPERFAMILY SSF55261 815 945 1.19E-34 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Pfam PF02934 GatB/GatE catalytic domain 17 298 1.8E-87 T 20-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 PANTHER PTHR22594:SF5 515 823 6.1E-191 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 PANTHER PTHR22594:SF5 895 1100 6.1E-191 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 14 477 23.673 T 20-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 PANTHER PTHR22594 515 823 6.1E-191 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 PANTHER PTHR22594 895 1100 6.1E-191 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14230 b6cd705eb1e30062f932251da8b80330 1115 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 523 1092 30.415 T 20-04-2016 APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 SUPERFAMILY SSF46626 617 711 1.45E-12 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 Gene3D G3DSA:1.25.10.10 436 599 5.4E-5 T 20-04-2016 IPR011989 Armadillo-like helical APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 SUPERFAMILY SSF50952 47 260 2.62E-6 T 20-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 SUPERFAMILY SSF50952 296 313 2.62E-6 T 20-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 SUPERFAMILY SSF50952 359 392 2.62E-6 T 20-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 PANTHER PTHR11961 43 137 1.6E-14 T 20-04-2016 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 Gene3D G3DSA:2.120.10.30 294 419 2.5E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 Gene3D G3DSA:2.120.10.30 52 87 1.2E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 Gene3D G3DSA:2.120.10.30 148 162 1.2E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 PANTHER PTHR11961:SF12 43 137 1.6E-14 T 20-04-2016 APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 SUPERFAMILY SSF48371 435 581 1.63E-7 T 20-04-2016 IPR016024 Armadillo-type fold GO:0005488 APS56_RS05945 ad0b73dc74d75baa2bb0bf2002bc2119 743 Gene3D G3DSA:1.10.760.10 624 735 1.7E-13 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS07830 8e7310929572f7346a551835e310914f 694 Pfam PF12899 Alkaline and neutral invertase 528 685 5.2E-9 T 20-04-2016 IPR024746 Glycosyl hydrolase family 100 GO:0033926 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 APS56_RS07830 8e7310929572f7346a551835e310914f 694 PANTHER PTHR12526 17 222 6.0E-18 T 20-04-2016 APS56_RS07830 8e7310929572f7346a551835e310914f 694 Gene3D G3DSA:1.50.10.10 313 690 6.7E-8 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS07830 8e7310929572f7346a551835e310914f 694 PANTHER PTHR12526:SF320 17 222 6.0E-18 T 20-04-2016 APS56_RS07830 8e7310929572f7346a551835e310914f 694 Gene3D G3DSA:3.90.1070.10 101 168 1.3E-12 T 20-04-2016 APS56_RS07830 8e7310929572f7346a551835e310914f 694 Pfam PF06202 Amylo-alpha-1,6-glucosidase 327 430 8.5E-6 T 20-04-2016 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25+3.2.1.33|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APS56_RS07830 8e7310929572f7346a551835e310914f 694 SUPERFAMILY SSF48208 321 689 2.76E-40 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS07830 8e7310929572f7346a551835e310914f 694 Gene3D G3DSA:3.40.50.1000 169 251 6.2E-28 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07830 8e7310929572f7346a551835e310914f 694 Gene3D G3DSA:3.40.50.1000 10 91 6.2E-28 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07830 8e7310929572f7346a551835e310914f 694 SUPERFAMILY SSF56784 6 247 5.42E-33 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07830 8e7310929572f7346a551835e310914f 694 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 214 8.5E-21 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APS56_RS07830 8e7310929572f7346a551835e310914f 694 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 12 251 1.0E-62 T 20-04-2016 IPR006380 Sucrose-phosphatase, N-terminal APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 SUPERFAMILY SSF88659 120 180 9.16E-14 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 PANTHER PTHR30173:SF20 1 191 9.7E-42 T 20-04-2016 APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 PANTHER PTHR30173 1 191 9.7E-42 T 20-04-2016 APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 25 179 1.5E-39 T 20-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 Pfam PF04542 Sigma-70 region 2 30 92 1.1E-5 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 Gene3D G3DSA:1.10.10.10 117 180 2.6E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 Gene3D G3DSA:1.10.1740.10 6 100 4.7E-16 T 20-04-2016 APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 178 9.3E-22 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 SUPERFAMILY SSF88946 5 106 1.65E-17 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06255 9478dad2c0224b05fe145c2770d142f1 195 Pfam PF08281 Sigma-70, region 4 126 175 2.0E-13 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 ProSitePatterns PS01348 MraY family signature 2. 236 247 - T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 27 411 21.538 T 20-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 PANTHER PTHR22926 2 154 1.3E-131 T 20-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 PANTHER PTHR22926 199 413 1.3E-131 T 20-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 70 82 3.1E-5 T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 PANTHER PTHR22926:SF5 2 154 1.3E-131 T 20-04-2016 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 PANTHER PTHR22926:SF5 199 413 1.3E-131 T 20-04-2016 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 ProSitePatterns PS01347 MraY family signature 1. 70 82 - T 20-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 216 413 7.3E-73 T 20-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08475 23033f0a29cc85f8e29e868f9acd7ffd 413 Pfam PF00953 Glycosyl transferase family 4 101 330 2.0E-41 T 20-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 PANTHER PTHR23135:SF5 1 378 3.0E-57 T 20-04-2016 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 Pfam PF01225 Mur ligase family, catalytic domain 3 102 1.0E-10 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 Gene3D G3DSA:3.90.190.20 306 441 3.9E-23 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 SUPERFAMILY SSF53244 303 441 2.93E-28 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 SUPERFAMILY SSF53623 93 302 5.49E-33 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 Pfam PF08245 Mur ligase middle domain 108 280 2.9E-14 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 380 3.8E-6 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 PANTHER PTHR23135 1 378 3.0E-57 T 20-04-2016 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 SUPERFAMILY SSF51984 1 91 2.49E-15 T 20-04-2016 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 Gene3D G3DSA:3.40.1190.10 92 305 3.1E-48 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06510 7ab88cf3f6a3f45d81ae1e4141bfee0a 451 Gene3D G3DSA:3.40.50.720 1 91 2.8E-22 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SMART SM00342 1285 1368 2.2E-26 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PANTHER PTHR24423 7 120 3.4E-117 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PANTHER PTHR24423 800 1277 3.4E-117 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:3.40.50.2300 1118 1242 1.0E-36 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF00072 Response regulator receiver domain 1123 1233 2.8E-22 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SUPERFAMILY SSF55874 911 1073 2.49E-41 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SUPERFAMILY SSF47384 845 922 1.31E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF12833 Helix-turn-helix domain 1291 1369 2.7E-20 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SUPERFAMILY SSF63829 340 566 7.19E-18 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:2.120.10.30 99 156 9.4E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 969 1073 9.1E-21 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:1.10.10.60 1323 1372 3.7E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PANTHER PTHR24423:SF487 7 120 3.4E-117 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PANTHER PTHR24423:SF487 800 1277 3.4E-117 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF07494 Two component regulator propeller 334 351 0.0034 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF07494 Two component regulator propeller 427 448 9.8E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF07494 Two component regulator propeller 474 496 4.0E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF07494 Two component regulator propeller 50 73 2.2E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF07494 Two component regulator propeller 277 299 3.6E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1322 1364 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1004 1018 3.4E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1037 1055 3.4E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1061 1074 3.4E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF07495 Y_Y_Y domain 742 802 3.0E-12 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SUPERFAMILY SSF52172 1117 1244 2.28E-34 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:1.10.287.130 849 907 8.1E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PANTHER PTHR24423 255 348 3.4E-117 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SUPERFAMILY SSF46689 1321 1370 1.86E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:3.30.565.10 908 1075 4.9E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Pfam PF00512 His Kinase A (phospho-acceptor) domain 860 921 1.3E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SMART SM00388 857 922 1.5E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SUPERFAMILY SSF63829 42 301 1.06E-13 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 PANTHER PTHR24423:SF487 255 348 3.4E-117 T 20-04-2016 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:2.120.10.30 157 259 3.0E-7 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:2.120.10.30 335 414 2.4E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:2.120.10.30 486 593 4.1E-8 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SMART SM00448 1121 1233 1.3E-34 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 Gene3D G3DSA:1.10.10.60 1281 1322 6.0E-6 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS11355 0af18df4240b1badae6a89036c75dea3 1376 SMART SM00387 967 1077 2.7E-27 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00625 0939c121ccdbe31dde6c6064d31e700e 695 Pfam PF12805 FUSC-like inner membrane protein yccS 26 275 5.4E-29 T 20-04-2016 IPR032692 Integral membrane protein YccS, N-terminal APS56_RS00625 0939c121ccdbe31dde6c6064d31e700e 695 Pfam PF13515 Fusaric acid resistance protein-like 365 486 1.1E-21 T 20-04-2016 APS56_RS00625 0939c121ccdbe31dde6c6064d31e700e 695 PANTHER PTHR30509 23 688 1.1E-29 T 20-04-2016 APS56_RS00625 0939c121ccdbe31dde6c6064d31e700e 695 PANTHER PTHR30509:SF8 23 688 1.1E-29 T 20-04-2016 APS56_RS09905 6592aa0116343c03e4af2ef5f1bb3871 306 SUPERFAMILY SSF75005 21 240 4.03E-11 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09905 6592aa0116343c03e4af2ef5f1bb3871 306 PANTHER PTHR11339:SF236 11 303 2.1E-55 T 20-04-2016 APS56_RS09905 6592aa0116343c03e4af2ef5f1bb3871 306 PANTHER PTHR11339 11 303 2.1E-55 T 20-04-2016 APS56_RS09905 6592aa0116343c03e4af2ef5f1bb3871 306 Gene3D G3DSA:2.115.10.20 272 304 5.9E-9 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09905 6592aa0116343c03e4af2ef5f1bb3871 306 Gene3D G3DSA:2.115.10.20 12 102 5.9E-9 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 Gene3D G3DSA:3.30.70.260 6 82 1.5E-20 T 20-04-2016 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 PANTHER PTHR30239 1 169 5.3E-30 T 20-04-2016 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 9 163 7.7E-27 T 20-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 SUPERFAMILY SSF55021 7 80 5.24E-14 T 20-04-2016 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 9 77 6.0E-11 T 20-04-2016 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 Gene3D G3DSA:3.30.70.1150 90 168 5.3E-13 T 20-04-2016 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 PANTHER PTHR30239:SF0 1 169 5.3E-30 T 20-04-2016 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 SUPERFAMILY SSF55021 81 164 4.43E-16 T 20-04-2016 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 Pfam PF10369 Small subunit of acetolactate synthase 90 162 9.4E-16 T 20-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08760 9adc37937b3ee6e5cf3eb343602d4732 177 Pfam PF01842 ACT domain 9 72 1.3E-9 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APS56_RS13190 0ab57db364114644733d810ddd7c8e37 64 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 54 5.1E-13 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS13190 0ab57db364114644733d810ddd7c8e37 64 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.9E-5 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS13190 0ab57db364114644733d810ddd7c8e37 64 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.9E-5 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS13190 0ab57db364114644733d810ddd7c8e37 64 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.9E-5 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS13190 0ab57db364114644733d810ddd7c8e37 64 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 16.066 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS13190 0ab57db364114644733d810ddd7c8e37 64 Pfam PF01165 Ribosomal protein S21 4 54 1.4E-15 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 PANTHER PTHR30341:SF0 6 248 1.2E-146 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 PANTHER PTHR30341:SF0 283 424 1.2E-146 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 Gene3D G3DSA:1.20.1530.10 294 429 2.8E-140 T 20-04-2016 IPR023171 Na/H antiporter domain APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 Gene3D G3DSA:1.20.1530.10 9 249 2.8E-140 T 20-04-2016 IPR023171 Na/H antiporter domain APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 10 430 21.707 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 PANTHER PTHR30341 6 248 1.2E-146 T 20-04-2016 APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 PANTHER PTHR30341 283 424 1.2E-146 T 20-04-2016 APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 13 424 7.8E-121 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APS56_RS10480 653fdfbab41cc54abdb20d0137fca8d0 430 Pfam PF06965 Na+/H+ antiporter 1 12 424 1.1E-138 T 20-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 SUPERFAMILY SSF50249 190 264 9.52E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 SUPERFAMILY SSF52540 229 506 8.91E-67 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 Gene3D G3DSA:2.40.50.140 3 46 6.7E-50 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 Gene3D G3DSA:2.40.50.140 185 264 6.7E-50 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 SMART SM00382 306 491 7.7E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 SUPERFAMILY SSF68912 3 46 3.77E-9 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 PANTHER PTHR15184:SF34 185 553 1.6E-182 T 20-04-2016 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 SMART SM00959 6 48 6.3E-10 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 TIGRFAM TIGR00767 rho: transcription termination factor Rho 3 553 6.8E-197 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 Pfam PF07498 Rho termination factor, N-terminal domain 6 44 5.3E-12 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 SMART SM00357 191 257 8.1E-18 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 Hamap MF_01884 Transcription termination factor Rho [rho]. 188 554 201.127 T 20-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 PANTHER PTHR15184 185 553 1.6E-182 T 20-04-2016 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 295 499 2.7E-21 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 Gene3D G3DSA:3.40.50.300 270 551 1.2E-98 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05015 e08de15feef4d26e5bad29e8e7a50edf 554 Pfam PF07497 Rho termination factor, RNA-binding domain 191 264 1.4E-31 T 20-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 488 723 2.1E-99 T 20-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 11 442 4.5E-115 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 SUPERFAMILY SSF46626 532 664 7.78E-22 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 Gene3D G3DSA:1.10.760.10 694 720 6.2E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 Gene3D G3DSA:1.10.760.10 503 656 6.2E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 489 725 1.5E-77 T 20-04-2016 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 7 471 7.4E-199 T 20-04-2016 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 PANTHER PTHR10422:SF21 1 466 1.7E-301 T 20-04-2016 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 PANTHER PTHR10422:SF21 539 629 1.7E-301 T 20-04-2016 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 PANTHER PTHR10422 1 466 1.7E-301 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 PANTHER PTHR10422 539 629 1.7E-301 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 Gene3D G3DSA:1.20.210.10 8 481 1.1E-71 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 SUPERFAMILY SSF81442 8 478 1.96E-118 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS07875 b05f9f6714a2f753b749f80a47e39b3b 730 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 202 257 - T 20-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12990 35d5c493e76c55a52010e067496b99ac 126 SUPERFAMILY SSF51230 2 124 1.02E-42 T 20-04-2016 IPR011053 Single hybrid motif APS56_RS12990 35d5c493e76c55a52010e067496b99ac 126 PANTHER PTHR11715 1 124 2.0E-59 T 20-04-2016 IPR002930 Glycine cleavage system H-protein APS56_RS12990 35d5c493e76c55a52010e067496b99ac 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APS56_RS12990 35d5c493e76c55a52010e067496b99ac 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 2 124 7.5E-47 T 20-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 APS56_RS12990 35d5c493e76c55a52010e067496b99ac 126 Pfam PF01597 Glycine cleavage H-protein 7 123 1.7E-43 T 20-04-2016 IPR002930 Glycine cleavage system H-protein APS56_RS12990 35d5c493e76c55a52010e067496b99ac 126 Gene3D G3DSA:2.40.50.100 6 124 4.8E-48 T 20-04-2016 APS56_RS12990 35d5c493e76c55a52010e067496b99ac 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 28.222 T 20-04-2016 IPR002930 Glycine cleavage system H-protein APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 SUPERFAMILY SSF81336 201 360 5.89E-31 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 PRINTS PR00123 ATP synthase A subunit signature 209 225 1.7E-17 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 PRINTS PR00123 ATP synthase A subunit signature 347 362 1.7E-17 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 PRINTS PR00123 ATP synthase A subunit signature 288 310 1.7E-17 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 Pfam PF00119 ATP synthase A chain 150 360 1.2E-41 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 126 361 8.6E-38 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 Gene3D G3DSA:1.20.120.220 201 367 6.5E-35 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 PANTHER PTHR11410:SF0 125 370 1.6E-48 T 20-04-2016 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 PANTHER PTHR11410 125 370 1.6E-48 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS10680 3c84b895933895eb986c201bdb858fc1 371 Hamap MF_01393 ATP synthase subunit a [atpB]. 128 367 11.821 T 20-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 APS56_RS08095 f84108fa5c6f5a3ee14000307900855d 465 Gene3D G3DSA:2.40.37.10 295 459 1.3E-12 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APS56_RS08095 f84108fa5c6f5a3ee14000307900855d 465 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 318 431 2.6E-13 T 20-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APS56_RS08095 f84108fa5c6f5a3ee14000307900855d 465 PANTHER PTHR11482 23 463 7.2E-51 T 20-04-2016 APS56_RS08095 f84108fa5c6f5a3ee14000307900855d 465 PANTHER PTHR11482:SF36 23 463 7.2E-51 T 20-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APS56_RS08095 f84108fa5c6f5a3ee14000307900855d 465 Gene3D G3DSA:3.20.20.10 52 294 2.1E-28 T 20-04-2016 IPR029066 PLP-binding barrel APS56_RS08095 f84108fa5c6f5a3ee14000307900855d 465 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 72 312 1.6E-15 T 20-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APS56_RS08095 f84108fa5c6f5a3ee14000307900855d 465 SUPERFAMILY SSF50621 285 442 6.28E-20 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APS56_RS08095 f84108fa5c6f5a3ee14000307900855d 465 SUPERFAMILY SSF51419 52 313 8.5E-38 T 20-04-2016 IPR029066 PLP-binding barrel APS56_RS06685 61dff1c7fe3ba974a9d8caf53acfea46 245 Pfam PF02405 Permease MlaE 35 241 3.2E-58 T 20-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APS56_RS06685 61dff1c7fe3ba974a9d8caf53acfea46 245 PANTHER PTHR30188 1 243 6.9E-53 T 20-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APS56_RS05215 af419780b4e17d5323311a9f5fd9ee03 356 SUPERFAMILY SSF56935 28 340 4.39E-6 T 20-04-2016 APS56_RS05215 af419780b4e17d5323311a9f5fd9ee03 356 Gene3D G3DSA:2.40.160.60 29 94 4.0E-8 T 20-04-2016 APS56_RS05215 af419780b4e17d5323311a9f5fd9ee03 356 Gene3D G3DSA:2.40.160.60 152 338 1.6E-6 T 20-04-2016 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PANTHER PTHR10724 57 558 6.9E-196 T 20-04-2016 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SUPERFAMILY SSF50249 151 232 9.8E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Gene3D G3DSA:2.40.50.140 487 565 2.1E-11 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SUPERFAMILY SSF50249 237 325 4.22E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Pfam PF00575 S1 RNA binding domain 237 308 1.3E-18 T 20-04-2016 IPR003029 S1 domain GO:0003676 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Pfam PF00575 S1 RNA binding domain 151 219 1.3E-7 T 20-04-2016 IPR003029 S1 domain GO:0003676 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Pfam PF00575 S1 RNA binding domain 499 563 5.9E-7 T 20-04-2016 IPR003029 S1 domain GO:0003676 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Pfam PF00575 S1 RNA binding domain 411 482 1.9E-13 T 20-04-2016 IPR003029 S1 domain GO:0003676 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Pfam PF00575 S1 RNA binding domain 322 395 7.1E-17 T 20-04-2016 IPR003029 S1 domain GO:0003676 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SUPERFAMILY SSF50249 303 401 2.14E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 378 396 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 260 281 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 90 104 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 174 191 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 338 357 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 132 151 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 203 223 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 156 172 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PRINTS PR00681 Ribosomal protein S1 signature 72 90 1.0E-61 T 20-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 PANTHER PTHR10724:SF6 57 558 6.9E-196 T 20-04-2016 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SUPERFAMILY SSF50249 477 580 1.12E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SMART SM00316 410 482 3.0E-20 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SMART SM00316 323 395 2.4E-22 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SMART SM00316 151 219 1.0E-7 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SMART SM00316 238 308 2.3E-23 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SMART SM00316 70 135 1.7E-6 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SMART SM00316 497 564 8.8E-9 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Gene3D G3DSA:2.40.50.140 73 148 1.8E-8 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Gene3D G3DSA:2.40.50.140 240 322 7.5E-27 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SUPERFAMILY SSF50249 68 160 1.91E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Gene3D G3DSA:2.40.50.140 408 486 2.2E-24 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Gene3D G3DSA:2.40.50.140 323 405 3.5E-26 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 Gene3D G3DSA:2.40.50.140 149 220 1.9E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01645 1a921abefd3f7d9be3f0480b707c68af 616 SUPERFAMILY SSF50249 390 503 4.1E-25 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 Gene3D G3DSA:1.10.10.60 280 324 2.6E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 PANTHER PTHR11019:SF61 174 326 5.2E-26 T 20-04-2016 APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 SMART SM00342 243 326 2.1E-24 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 SUPERFAMILY SSF46689 229 277 5.38E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 Gene3D G3DSA:1.10.10.60 229 279 2.6E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 SUPERFAMILY SSF46689 279 325 1.03E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 280 322 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 PANTHER PTHR11019 174 326 5.2E-26 T 20-04-2016 APS56_RS07670 b374a43bbfe6e2cc1fea920072a89bb7 328 Pfam PF12833 Helix-turn-helix domain 250 324 5.3E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS02565 934f11746c1bd695f3551f7c01e18e6f 108 SMART SM00418 6 87 7.0E-20 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS02565 934f11746c1bd695f3551f7c01e18e6f 108 Gene3D G3DSA:1.10.10.10 6 105 5.5E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02565 934f11746c1bd695f3551f7c01e18e6f 108 SUPERFAMILY SSF46785 6 96 7.79E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02565 934f11746c1bd695f3551f7c01e18e6f 108 Pfam PF12840 Helix-turn-helix domain 6 64 2.3E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02565 934f11746c1bd695f3551f7c01e18e6f 108 PANTHER PTHR33154 6 96 1.1E-18 T 20-04-2016 APS56_RS02565 934f11746c1bd695f3551f7c01e18e6f 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 5.1E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS02565 934f11746c1bd695f3551f7c01e18e6f 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 5.1E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS02565 934f11746c1bd695f3551f7c01e18e6f 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 5.1E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 254 330 3.0E-24 T 20-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 238 1.3E-110 T 20-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 329 3.3E-137 T 20-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 PANTHER PTHR13779:SF25 15 329 9.0E-165 T 20-04-2016 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 340 158.514 T 20-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 SUPERFAMILY SSF52540 22 252 9.77E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 Gene3D G3DSA:1.10.8.60 187 257 1.4E-30 T 20-04-2016 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 SUPERFAMILY SSF46785 259 329 2.83E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 SMART SM00382 54 185 2.8E-14 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 5.0E-34 T 20-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 PANTHER PTHR13779 15 329 9.0E-165 T 20-04-2016 APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 Gene3D G3DSA:1.10.10.10 260 329 1.4E-34 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12955 85f28682e7343ee9c333a601126ebc8e 340 Gene3D G3DSA:3.40.50.300 22 181 1.6E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00050 8cf3dccb1989993908264babcf79bb30 451 Pfam PF02687 FtsX-like permease family 331 444 3.1E-20 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS00050 8cf3dccb1989993908264babcf79bb30 451 Pfam PF12704 MacB-like periplasmic core domain 28 256 3.9E-32 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APS56_RS00050 8cf3dccb1989993908264babcf79bb30 451 PANTHER PTHR30572 17 244 6.2E-91 T 20-04-2016 APS56_RS00050 8cf3dccb1989993908264babcf79bb30 451 PANTHER PTHR30572 271 451 6.2E-91 T 20-04-2016 APS56_RS00050 8cf3dccb1989993908264babcf79bb30 451 PANTHER PTHR30572:SF7 17 244 6.2E-91 T 20-04-2016 APS56_RS00050 8cf3dccb1989993908264babcf79bb30 451 PANTHER PTHR30572:SF7 271 451 6.2E-91 T 20-04-2016 APS56_RS06880 2bfdc285d023c6ecd23f85bb9adfb774 197 PANTHER PTHR24567:SF33 12 190 3.7E-30 T 20-04-2016 APS56_RS06880 2bfdc285d023c6ecd23f85bb9adfb774 197 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 5.5E-16 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS06880 2bfdc285d023c6ecd23f85bb9adfb774 197 PANTHER PTHR24567 12 190 3.7E-30 T 20-04-2016 APS56_RS06880 2bfdc285d023c6ecd23f85bb9adfb774 197 Gene3D G3DSA:2.60.120.10 1 155 3.0E-35 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS06880 2bfdc285d023c6ecd23f85bb9adfb774 197 SUPERFAMILY SSF51206 17 144 1.31E-23 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS02520 2bfdc285d023c6ecd23f85bb9adfb774 197 PANTHER PTHR24567:SF33 12 190 3.7E-30 T 20-04-2016 APS56_RS02520 2bfdc285d023c6ecd23f85bb9adfb774 197 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 5.5E-16 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS02520 2bfdc285d023c6ecd23f85bb9adfb774 197 PANTHER PTHR24567 12 190 3.7E-30 T 20-04-2016 APS56_RS02520 2bfdc285d023c6ecd23f85bb9adfb774 197 Gene3D G3DSA:2.60.120.10 1 155 3.0E-35 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS02520 2bfdc285d023c6ecd23f85bb9adfb774 197 SUPERFAMILY SSF51206 17 144 1.31E-23 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS14060 59e1889bc91408ea5ea2ce3c0b58b110 127 Gene3D G3DSA:3.30.420.80 5 127 3.3E-50 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APS56_RS14060 59e1889bc91408ea5ea2ce3c0b58b110 127 PIRSF PIRSF002131 1 127 7.8E-50 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APS56_RS14060 59e1889bc91408ea5ea2ce3c0b58b110 127 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 127 31.556 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APS56_RS14060 59e1889bc91408ea5ea2ce3c0b58b110 127 ProSitePatterns PS00054 Ribosomal protein S11 signature. 95 117 - T 20-04-2016 IPR018102 Ribosomal S11, conserved site APS56_RS14060 59e1889bc91408ea5ea2ce3c0b58b110 127 Pfam PF00411 Ribosomal protein S11 17 126 3.0E-44 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APS56_RS14060 59e1889bc91408ea5ea2ce3c0b58b110 127 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 124 2.5E-54 T 20-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14060 59e1889bc91408ea5ea2ce3c0b58b110 127 SUPERFAMILY SSF53137 16 127 1.24E-44 T 20-04-2016 APS56_RS14060 59e1889bc91408ea5ea2ce3c0b58b110 127 PANTHER PTHR11759 19 127 9.0E-57 T 20-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:2.120.10.30 74 143 3.9E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:2.120.10.30 554 652 6.5E-7 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:2.120.10.30 333 391 4.6E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:2.120.10.30 392 487 7.9E-9 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:2.120.10.30 144 262 4.6E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PANTHER PTHR24423:SF487 356 434 1.2E-131 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PANTHER PTHR24423:SF487 31 103 1.2E-131 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PANTHER PTHR24423:SF487 805 1295 1.2E-131 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SUPERFAMILY SSF101898 125 403 4.45E-14 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SUPERFAMILY SSF47384 837 917 7.46E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1340 1382 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 968 1088 5.4E-19 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:3.40.50.2300 1138 1265 1.2E-40 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SUPERFAMILY SSF55874 907 1087 2.1E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SMART SM00448 1140 1252 8.1E-38 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SMART SM00342 1303 1386 9.9E-21 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SUPERFAMILY SSF63829 35 155 2.4E-7 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SUPERFAMILY SSF63829 425 672 3.71E-21 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Pfam PF07495 Y_Y_Y domain 745 808 8.7E-14 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SUPERFAMILY SSF46689 1339 1388 3.32E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1018 1032 1.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1049 1067 1.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1073 1086 1.9E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 852 916 3.2E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SMART SM00387 964 1089 2.0E-27 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Pfam PF12833 Helix-turn-helix domain 1311 1386 1.5E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SUPERFAMILY SSF52172 1140 1265 2.42E-36 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Pfam PF07494 Two component regulator propeller 180 203 0.013 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Pfam PF07494 Two component regulator propeller 79 101 1.5E-5 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Pfam PF07494 Two component regulator propeller 33 55 0.003 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:3.30.565.10 905 1087 3.0E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:1.10.287.130 844 904 9.5E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Gene3D G3DSA:1.10.10.60 1339 1390 2.7E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PANTHER PTHR24423 356 434 1.2E-131 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PANTHER PTHR24423 31 103 1.2E-131 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 PANTHER PTHR24423 805 1295 1.2E-131 T 20-04-2016 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 SMART SM00388 851 918 2.5E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06185 f81bd495ce1bd6cc8953873253e4361c 1399 Pfam PF00072 Response regulator receiver domain 1142 1253 9.2E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 PRINTS PR00143 Citrate synthase signature 241 269 1.7E-50 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 PRINTS PR00143 Citrate synthase signature 219 234 1.7E-50 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 PRINTS PR00143 Citrate synthase signature 380 394 1.7E-50 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 PRINTS PR00143 Citrate synthase signature 297 317 1.7E-50 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 PRINTS PR00143 Citrate synthase signature 360 376 1.7E-50 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 PRINTS PR00143 Citrate synthase signature 165 178 1.7E-50 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 PIRSF PIRSF001369 37 428 3.8E-147 T 20-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 1.2E-126 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 ProSitePatterns PS00480 Citrate synthase signature. 304 316 - T 20-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 12 421 3.5E-160 T 20-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 Gene3D G3DSA:1.10.580.10 52 280 1.9E-87 T 20-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 Gene3D G3DSA:1.10.230.10 281 373 1.5E-36 T 20-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 SUPERFAMILY SSF48256 3 428 3.27E-150 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS14090 7511e0f60b0f058f2e9f9fafbcdede06 428 PANTHER PTHR11739 20 428 3.2E-184 T 20-04-2016 IPR002020 Citrate synthase GO:0046912 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 Pfam PF02803 Thiolase, C-terminal domain 270 390 7.7E-46 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 SUPERFAMILY SSF53901 270 390 1.66E-35 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 20-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 PANTHER PTHR18919 1 391 8.6E-209 T 20-04-2016 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 20-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 6.0E-138 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 PIRSF PIRSF000429 1 391 1.6E-124 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 Gene3D G3DSA:3.40.47.10 276 390 3.1E-56 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 Gene3D G3DSA:3.40.47.10 143 193 3.1E-56 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 Gene3D G3DSA:3.40.47.10 194 275 8.4E-78 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 Gene3D G3DSA:3.40.47.10 4 124 8.4E-78 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 PANTHER PTHR18919:SF81 1 391 8.6E-209 T 20-04-2016 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.6E-99 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 20-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APS56_RS03250 46e853a18c20d3c28d06624a0d50e5ff 391 SUPERFAMILY SSF53901 4 268 1.35E-83 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS01630 4c2d501ff382e42b77c5b12b37343e97 250 SMART SM00850 149 246 1.1E-22 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS01630 4c2d501ff382e42b77c5b12b37343e97 250 Pfam PF00072 Response regulator receiver domain 4 112 9.5E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01630 4c2d501ff382e42b77c5b12b37343e97 250 Gene3D G3DSA:2.40.50.40 141 211 6.7E-15 T 20-04-2016 APS56_RS01630 4c2d501ff382e42b77c5b12b37343e97 250 SMART SM00448 1 112 2.2E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01630 4c2d501ff382e42b77c5b12b37343e97 250 PANTHER PTHR26402 1 112 6.7E-27 T 20-04-2016 APS56_RS01630 4c2d501ff382e42b77c5b12b37343e97 250 Pfam PF04397 LytTr DNA-binding domain 151 245 1.8E-17 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS01630 4c2d501ff382e42b77c5b12b37343e97 250 SUPERFAMILY SSF52172 2 119 5.98E-27 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS01630 4c2d501ff382e42b77c5b12b37343e97 250 Gene3D G3DSA:3.40.50.2300 2 119 2.6E-27 T 20-04-2016 APS56_RS03605 dddcbbbc52593cf85dd559426c93172b 276 Gene3D G3DSA:3.40.50.720 5 232 1.0E-22 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS03605 dddcbbbc52593cf85dd559426c93172b 276 SUPERFAMILY SSF51735 9 242 1.85E-26 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS03605 dddcbbbc52593cf85dd559426c93172b 276 PANTHER PTHR10491 1 237 7.9E-16 T 20-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APS56_RS03605 dddcbbbc52593cf85dd559426c93172b 276 Pfam PF04321 RmlD substrate binding domain 88 249 5.3E-14 T 20-04-2016 IPR029903 RmlD-like substrate binding domain APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 Gene3D G3DSA:3.30.1120.10 401 492 1.1E-17 T 20-04-2016 APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 ProSitePatterns PS00149 Sulfatases signature 2. 112 122 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 PANTHER PTHR10342 15 517 4.8E-132 T 20-04-2016 APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 SUPERFAMILY SSF53649 15 173 6.54E-117 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 SUPERFAMILY SSF53649 221 492 6.54E-117 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 ProSitePatterns PS00523 Sulfatases signature 1. 64 76 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 PANTHER PTHR10342:SF199 15 517 4.8E-132 T 20-04-2016 APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 Gene3D G3DSA:3.40.720.10 15 400 1.1E-103 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS15040 bc55d360aeeebee32fe9e2a65978061e 517 Pfam PF00884 Sulfatase 17 384 5.7E-64 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS02080 e17f2bab2fd89111ed0da897ff00e65c 358 Gene3D G3DSA:3.90.25.10 217 298 5.1E-4 T 20-04-2016 APS56_RS02080 e17f2bab2fd89111ed0da897ff00e65c 358 Pfam PF02719 Polysaccharide biosynthesis protein 39 320 6.0E-88 T 20-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain APS56_RS02080 e17f2bab2fd89111ed0da897ff00e65c 358 Gene3D G3DSA:3.40.50.720 38 216 2.0E-42 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02080 e17f2bab2fd89111ed0da897ff00e65c 358 SUPERFAMILY SSF51735 39 305 2.0E-50 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02080 e17f2bab2fd89111ed0da897ff00e65c 358 PANTHER PTHR10366:SF256 330 350 9.4E-81 T 20-04-2016 APS56_RS02080 e17f2bab2fd89111ed0da897ff00e65c 358 PANTHER PTHR10366:SF256 38 299 9.4E-81 T 20-04-2016 APS56_RS02080 e17f2bab2fd89111ed0da897ff00e65c 358 PANTHER PTHR10366 330 350 9.4E-81 T 20-04-2016 APS56_RS02080 e17f2bab2fd89111ed0da897ff00e65c 358 PANTHER PTHR10366 38 299 9.4E-81 T 20-04-2016 APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 1.2E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 1.2E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 1.2E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 SUPERFAMILY SSF51735 2 242 8.95E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 Gene3D G3DSA:3.40.50.720 2 263 2.5E-62 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PANTHER PTHR24322 142 173 6.3E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PANTHER PTHR24322 7 126 6.3E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 Pfam PF00106 short chain dehydrogenase 3 182 1.0E-48 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 2.7E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 2.7E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.7E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 2.7E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 2.7E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS01060 5b6219e45854aba66abfb38a94ee34f0 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 129 157 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 SMART SM00487 21 220 1.7E-57 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 SMART SM00490 256 337 5.1E-33 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 Pfam PF00270 DEAD/DEAH box helicase 27 193 3.7E-45 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 Pfam PF00271 Helicase conserved C-terminal domain 244 337 4.3E-27 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 20-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 SUPERFAMILY SSF52540 72 358 1.04E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 Gene3D G3DSA:3.40.50.300 1 204 2.9E-75 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 Gene3D G3DSA:3.40.50.300 205 370 1.8E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 Pfam PF03880 DbpA RNA binding domain 461 531 3.1E-16 T 20-04-2016 IPR005580 DbpA, RNA-binding domain APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 PANTHER PTHR24031 489 607 1.2E-191 T 20-04-2016 APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 PANTHER PTHR24031 1 446 1.2E-191 T 20-04-2016 APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 PANTHER PTHR24031:SF261 489 607 1.2E-191 T 20-04-2016 APS56_RS15420 7b0f71f81ebc376c9f6ec3107a536e93 607 PANTHER PTHR24031:SF261 1 446 1.2E-191 T 20-04-2016 APS56_RS15390 72d9be9c9589f3af32afed42aff04b58 317 PANTHER PTHR30468:SF6 8 317 1.2E-56 T 20-04-2016 APS56_RS15390 72d9be9c9589f3af32afed42aff04b58 317 Gene3D G3DSA:3.40.50.150 54 152 2.6E-5 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS15390 72d9be9c9589f3af32afed42aff04b58 317 SUPERFAMILY SSF53335 60 151 5.47E-6 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS15390 72d9be9c9589f3af32afed42aff04b58 317 PANTHER PTHR30468 8 317 1.2E-56 T 20-04-2016 APS56_RS15390 72d9be9c9589f3af32afed42aff04b58 317 PIRSF PIRSF018005 1 315 9.5E-83 T 20-04-2016 IPR017804 Methyltransferase EgtD-like APS56_RS15390 72d9be9c9589f3af32afed42aff04b58 317 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 185 308 2.6E-34 T 20-04-2016 IPR019257 Histidine-specific methyltransferase, SAM-dependent APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 Gene3D G3DSA:2.40.170.20 224 788 2.5E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 Pfam PF00593 TonB dependent receptor 535 786 2.1E-19 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 Gene3D G3DSA:2.170.130.10 108 223 1.1E-27 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 SUPERFAMILY SSF56935 98 789 1.83E-80 T 20-04-2016 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 Gene3D G3DSA:2.60.40.1120 26 107 5.1E-10 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 Pfam PF13715 CarboxypepD_reg-like domain 26 110 2.1E-10 T 20-04-2016 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 PANTHER PTHR32552 525 789 1.9E-67 T 20-04-2016 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 PANTHER PTHR32552 105 499 1.9E-67 T 20-04-2016 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 Pfam PF07715 TonB-dependent Receptor Plug Domain 120 223 1.6E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 PANTHER PTHR32552:SF15 525 789 1.9E-67 T 20-04-2016 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 PANTHER PTHR32552:SF15 105 499 1.9E-67 T 20-04-2016 APS56_RS12850 8b7ef84e9892e0ecd1c59da41456549d 791 SUPERFAMILY SSF49464 24 108 8.63E-12 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS04200 99f1e660409b09c1fc9100e212f496a9 244 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 50 190 1.4E-6 T 20-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 SUPERFAMILY SSF55874 226 379 1.26E-25 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 Gene3D G3DSA:3.30.450.20 20 158 1.4E-25 T 20-04-2016 APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 1.3E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 343 361 1.3E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 325 1.3E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 Pfam PF08447 PAS fold 53 136 1.7E-14 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 SUPERFAMILY SSF55785 32 144 2.28E-17 T 20-04-2016 IPR000014 PAS domain APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 Gene3D G3DSA:3.30.565.10 229 383 1.5E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 SMART SM00387 271 383 2.4E-13 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 PANTHER PTHR24423 29 385 4.9E-37 T 20-04-2016 APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 SMART SM00086 99 142 0.0016 T 20-04-2016 IPR001610 PAC motif APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 32 148 2.7E-10 T 20-04-2016 IPR000014 PAS domain APS56_RS03315 f77a9dade5ec899b52f874f298f87367 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 277 380 1.3E-14 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10850 5756404824fe87720251ed2b158b2136 289 Pfam PF01551 Peptidase family M23 187 282 2.3E-28 T 20-04-2016 IPR016047 Peptidase M23 APS56_RS10850 5756404824fe87720251ed2b158b2136 289 PANTHER PTHR21666 92 287 1.0E-33 T 20-04-2016 APS56_RS10850 5756404824fe87720251ed2b158b2136 289 SUPERFAMILY SSF51261 96 286 6.98E-44 T 20-04-2016 IPR011055 Duplicated hybrid motif APS56_RS10850 5756404824fe87720251ed2b158b2136 289 Gene3D G3DSA:2.70.70.10 151 287 1.5E-36 T 20-04-2016 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 PANTHER PTHR10342 139 446 8.4E-126 T 20-04-2016 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 PANTHER PTHR10342 9 118 8.4E-126 T 20-04-2016 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 Gene3D G3DSA:3.30.1120.10 359 446 1.5E-19 T 20-04-2016 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 SUPERFAMILY SSF53649 10 126 5.52E-104 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 SUPERFAMILY SSF53649 150 446 5.52E-104 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 PANTHER PTHR10342:SF199 139 446 8.4E-126 T 20-04-2016 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 PANTHER PTHR10342:SF199 9 118 8.4E-126 T 20-04-2016 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 ProSitePatterns PS00523 Sulfatases signature 1. 59 71 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 Gene3D G3DSA:3.40.720.10 10 358 7.8E-92 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09715 4ba7f48a5a3e9a7b38d2a5373cd28947 474 Pfam PF00884 Sulfatase 11 341 3.0E-61 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 PANTHER PTHR11749 2 220 7.0E-108 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 202 2.5E-78 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 SUPERFAMILY SSF51366 5 216 4.59E-71 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 215 4.5E-87 T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 PIRSF PIRSF001461 1 220 2.3E-87 T 20-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 PANTHER PTHR11749:SF3 2 220 7.0E-108 T 20-04-2016 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 135 157 - T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 Gene3D G3DSA:3.20.20.70 5 218 6.6E-89 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS08405 ece7ef5edce4d9af7f116fb557024f24 220 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 20-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APS56_RS11335 04c9464565adfa6f0fbacb594aa9f185 529 Pfam PF14587 O-Glycosyl hydrolase family 30 43 402 3.2E-155 T 20-04-2016 APS56_RS11335 04c9464565adfa6f0fbacb594aa9f185 529 Pfam PF17189 Glycosyl hydrolase family 30 beta sandwich domain 433 526 1.4E-6 T 20-04-2016 IPR033452 Glycosyl hydrolase family 30, beta sandwich domain APS56_RS11335 04c9464565adfa6f0fbacb594aa9f185 529 PANTHER PTHR11069 42 529 1.7E-60 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS11335 04c9464565adfa6f0fbacb594aa9f185 529 Gene3D G3DSA:3.20.20.80 52 422 1.8E-103 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS11335 04c9464565adfa6f0fbacb594aa9f185 529 Gene3D G3DSA:2.60.40.1180 423 529 3.5E-25 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS11335 04c9464565adfa6f0fbacb594aa9f185 529 SUPERFAMILY SSF51011 426 528 4.82E-6 T 20-04-2016 APS56_RS11335 04c9464565adfa6f0fbacb594aa9f185 529 SUPERFAMILY SSF51445 55 432 5.38E-38 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS11335 04c9464565adfa6f0fbacb594aa9f185 529 PANTHER PTHR11069:SF8 42 529 1.7E-60 T 20-04-2016 APS56_RS02615 2b7e43976a3cd42810fe9d44bd1a019c 125 Pfam PF01638 HxlR-like helix-turn-helix 28 115 6.4E-25 T 20-04-2016 IPR002577 Helix-turn-helix, HxlR type APS56_RS02615 2b7e43976a3cd42810fe9d44bd1a019c 125 Gene3D G3DSA:1.10.10.10 6 115 1.6E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02615 2b7e43976a3cd42810fe9d44bd1a019c 125 PANTHER PTHR33204 6 115 4.2E-27 T 20-04-2016 APS56_RS02615 2b7e43976a3cd42810fe9d44bd1a019c 125 SUPERFAMILY SSF46785 16 113 9.24E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS01150 2c9903e7d1adee934fcbdb97e407e834 192 PANTHER PTHR32552 6 188 4.2E-51 T 20-04-2016 APS56_RS01150 2c9903e7d1adee934fcbdb97e407e834 192 Gene3D G3DSA:3.30.420.10 30 184 7.2E-33 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS01150 2c9903e7d1adee934fcbdb97e407e834 192 Pfam PF00665 Integrase core domain 32 147 1.9E-26 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS01150 2c9903e7d1adee934fcbdb97e407e834 192 SUPERFAMILY SSF53098 29 188 5.16E-36 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS01150 2c9903e7d1adee934fcbdb97e407e834 192 PANTHER PTHR32552:SF23 6 188 4.2E-51 T 20-04-2016 APS56_RS11800 4242584e3ba1053edc320af21d480948 345 SUPERFAMILY SSF56042 156 326 3.14E-35 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS11800 4242584e3ba1053edc320af21d480948 345 PANTHER PTHR30270:SF0 1 344 1.3E-119 T 20-04-2016 APS56_RS11800 4242584e3ba1053edc320af21d480948 345 PANTHER PTHR30270 1 344 1.3E-119 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APS56_RS11800 4242584e3ba1053edc320af21d480948 345 Gene3D G3DSA:3.90.650.10 157 343 1.1E-48 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS11800 4242584e3ba1053edc320af21d480948 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 41 151 9.6E-22 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APS56_RS11800 4242584e3ba1053edc320af21d480948 345 Gene3D G3DSA:3.30.1330.10 10 154 2.3E-40 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APS56_RS11800 4242584e3ba1053edc320af21d480948 345 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 16 343 3.0E-93 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APS56_RS11800 4242584e3ba1053edc320af21d480948 345 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 15 340 28.291 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APS56_RS11800 4242584e3ba1053edc320af21d480948 345 PIRSF PIRSF005303 10 343 3.8E-100 T 20-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APS56_RS11800 4242584e3ba1053edc320af21d480948 345 SUPERFAMILY SSF55326 12 152 1.24E-32 T 20-04-2016 APS56_RS02655 8327315f563ad0c7f7d75dd53e690173 304 Pfam PF00805 Pentapeptide repeats (8 copies) 124 157 0.0013 T 20-04-2016 IPR001646 Pentapeptide repeat APS56_RS02655 8327315f563ad0c7f7d75dd53e690173 304 SMART SM00530 10 65 1.3E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS02655 8327315f563ad0c7f7d75dd53e690173 304 SUPERFAMILY SSF141571 100 235 1.31E-18 T 20-04-2016 APS56_RS02655 8327315f563ad0c7f7d75dd53e690173 304 SUPERFAMILY SSF47413 2 69 1.28E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS02655 8327315f563ad0c7f7d75dd53e690173 304 Gene3D G3DSA:1.10.260.40 2 74 1.1E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS02655 8327315f563ad0c7f7d75dd53e690173 304 Pfam PF01381 Helix-turn-helix 11 65 5.1E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS02655 8327315f563ad0c7f7d75dd53e690173 304 Pfam PF13599 Pentapeptide repeats (9 copies) 169 243 8.0E-10 T 20-04-2016 IPR001646 Pentapeptide repeat APS56_RS02655 8327315f563ad0c7f7d75dd53e690173 304 PANTHER PTHR10245 4 65 5.3E-15 T 20-04-2016 APS56_RS06465 67461b53bd205fc56fc4edb5be76011b 215 Pfam PF02508 Rnf-Nqr subunit, membrane protein 10 201 2.0E-57 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APS56_RS06465 67461b53bd205fc56fc4edb5be76011b 215 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 6 211 2.8E-89 T 20-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APS56_RS06465 67461b53bd205fc56fc4edb5be76011b 215 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 3 213 35.802 T 20-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APS56_RS06465 67461b53bd205fc56fc4edb5be76011b 215 PANTHER PTHR30586:SF1 3 213 4.2E-111 T 20-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APS56_RS06465 67461b53bd205fc56fc4edb5be76011b 215 PANTHER PTHR30586 3 213 4.2E-111 T 20-04-2016 APS56_RS06465 67461b53bd205fc56fc4edb5be76011b 215 PIRSF PIRSF006102 4 215 1.7E-63 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APS56_RS16250 e367fd8689d16ab16e1b97bfb208d9ee 315 SUPERFAMILY SSF51412 1 280 1.98E-54 T 20-04-2016 APS56_RS16250 e367fd8689d16ab16e1b97bfb208d9ee 315 Pfam PF03060 Nitronate monooxygenase 80 314 3.1E-36 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APS56_RS16250 e367fd8689d16ab16e1b97bfb208d9ee 315 Gene3D G3DSA:3.20.20.70 1 310 5.2E-53 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS16250 e367fd8689d16ab16e1b97bfb208d9ee 315 PANTHER PTHR32332 1 314 4.0E-69 T 20-04-2016 APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 PANTHER PTHR21000 1 560 0.0 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 PANTHER PTHR21000:SF5 1 560 0.0 T 20-04-2016 APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 Pfam PF00920 Dehydratase family 36 556 9.3E-209 T 20-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 467 478 - T 20-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 20 559 1.3E-217 T 20-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 SUPERFAMILY SSF52016 382 559 1.26E-57 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 559 41.882 T 20-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 SUPERFAMILY SSF143975 3 380 6.8E-134 T 20-04-2016 APS56_RS08770 a69d4dabc3d222c50bfa71c73995d8cf 560 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 20-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 Gene3D G3DSA:3.30.1120.10 397 448 3.2E-21 T 20-04-2016 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 PANTHER PTHR10342 305 441 1.5E-128 T 20-04-2016 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 PANTHER PTHR10342 1 285 1.5E-128 T 20-04-2016 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 PANTHER PTHR10342:SF199 305 441 1.5E-128 T 20-04-2016 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 PANTHER PTHR10342:SF199 1 285 1.5E-128 T 20-04-2016 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 Gene3D G3DSA:3.40.720.10 24 396 3.6E-99 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 Pfam PF00884 Sulfatase 26 359 2.1E-61 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 Pfam PF16347 Domain of unknown function (DUF4976) 363 435 1.7E-7 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS09765 78a251d5314b1e36ba9ddbe177ac39d3 471 SUPERFAMILY SSF53649 24 447 6.69E-120 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 SMART SM00382 62 234 1.1E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 Gene3D G3DSA:3.40.50.300 2 239 3.8E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 PANTHER PTHR24220 50 238 5.3E-91 T 20-04-2016 APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 PANTHER PTHR24220 9 19 5.3E-91 T 20-04-2016 APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 Pfam PF00005 ABC transporter 53 184 1.2E-20 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 PANTHER PTHR24220:SF117 50 238 5.3E-91 T 20-04-2016 APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 PANTHER PTHR24220:SF117 9 19 5.3E-91 T 20-04-2016 APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 SUPERFAMILY SSF52540 41 238 6.71E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05385 836ac63327922d127120851e3f00f5d5 402 Pfam PF14524 Wzt C-terminal domain 262 383 6.4E-8 T 20-04-2016 IPR029439 Wzt, C-terminal APS56_RS08100 ce8fa13bfa6e88908eda95afcc2b11bc 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 1.3E-73 T 20-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 APS56_RS08100 ce8fa13bfa6e88908eda95afcc2b11bc 255 Gene3D G3DSA:3.20.20.140 2 255 1.6E-80 T 20-04-2016 APS56_RS08100 ce8fa13bfa6e88908eda95afcc2b11bc 255 PANTHER PTHR10060:SF21 1 255 2.8E-95 T 20-04-2016 APS56_RS08100 ce8fa13bfa6e88908eda95afcc2b11bc 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 126 136 - T 20-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APS56_RS08100 ce8fa13bfa6e88908eda95afcc2b11bc 255 SUPERFAMILY SSF51556 3 255 9.72E-81 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS08100 ce8fa13bfa6e88908eda95afcc2b11bc 255 Pfam PF01026 TatD related DNase 4 253 1.4E-67 T 20-04-2016 IPR001130 TatD family GO:0016788 APS56_RS08100 ce8fa13bfa6e88908eda95afcc2b11bc 255 PIRSF PIRSF005902 1 255 2.0E-70 T 20-04-2016 IPR001130 TatD family GO:0016788 APS56_RS08100 ce8fa13bfa6e88908eda95afcc2b11bc 255 PANTHER PTHR10060 1 255 2.8E-95 T 20-04-2016 IPR001130 TatD family GO:0016788 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 483 2.1E-173 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 Gene3D G3DSA:3.40.630.10 398 485 1.0E-96 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 Gene3D G3DSA:3.40.630.10 2 182 1.0E-96 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 Pfam PF01546 Peptidase family M20/M25/M40 74 481 7.2E-21 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 451 473 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 160 178 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 429 445 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 207 224 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 252 271 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 136 153 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 364 382 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 102 120 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PRINTS PR00934 X-His dipeptidase (M25) signature 81 100 2.4E-67 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PANTHER PTHR11014 1 186 3.1E-143 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PANTHER PTHR11014 205 280 3.1E-143 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PANTHER PTHR11014 331 486 3.1E-143 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PANTHER PTHR11014:SF54 1 186 3.1E-143 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PANTHER PTHR11014:SF54 205 280 3.1E-143 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PANTHER PTHR11014:SF54 331 486 3.1E-143 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 SUPERFAMILY SSF53187 11 183 2.27E-59 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 SUPERFAMILY SSF53187 398 484 2.27E-59 T 20-04-2016 APS56_RS15465 a8d37917c0cf57cb69e03fc299fc189c 486 PIRSF PIRSF016599 2 486 1.2E-188 T 20-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 270 379 1.6E-8 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 508 635 2.8E-12 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 384 505 7.1E-19 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 SMART SM00091 269 335 1.1E-4 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 SMART SM00091 386 452 1.7E-10 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 SMART SM00091 511 577 1.7 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 SUPERFAMILY SSF55785 496 626 6.42E-14 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 Pfam PF08448 PAS fold 275 375 3.3E-8 T 20-04-2016 IPR013656 PAS fold-4 APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 Pfam PF00989 PAS fold 388 496 3.4E-15 T 20-04-2016 IPR013767 PAS fold GO:0006355 APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 Pfam PF13426 PAS domain 526 627 2.1E-4 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 Gene3D G3DSA:3.30.450.20 270 372 1.2E-18 T 20-04-2016 APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 SUPERFAMILY SSF55785 371 497 1.92E-24 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 SUPERFAMILY SSF55785 258 353 3.91E-15 T 20-04-2016 IPR000014 PAS domain APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 Gene3D G3DSA:3.30.450.20 497 626 5.0E-14 T 20-04-2016 APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 PANTHER PTHR24423 363 651 1.1E-31 T 20-04-2016 APS56_RS01030 ae37c48e2a24a1ea11dc8c5a886ac29b 690 Gene3D G3DSA:3.30.450.20 373 496 1.6E-24 T 20-04-2016 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 PANTHER PTHR23282 424 582 1.5E-20 T 20-04-2016 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 PANTHER PTHR23282:SF72 424 582 1.5E-20 T 20-04-2016 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 SMART SM00089 323 397 0.0061 T 20-04-2016 IPR022409 PKD/Chitinase domain APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 Gene3D G3DSA:2.60.40.670 321 388 6.4E-12 T 20-04-2016 IPR000601 PKD domain APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 604 673 2.6E-10 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 Pfam PF05572 Pregnancy-associated plasma protein-A 199 304 5.0E-7 T 20-04-2016 IPR008754 Peptidase M43, pregnancy-associated plasma-A Reactome: REACT_15380 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 SMART SM00137 424 591 4.4E-4 T 20-04-2016 IPR000998 MAM domain GO:0016020 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 SUPERFAMILY SSF49899 423 587 6.01E-24 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 SUPERFAMILY SSF55486 278 306 9.36E-7 T 20-04-2016 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 SUPERFAMILY SSF55486 156 219 9.36E-7 T 20-04-2016 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 Pfam PF00629 MAM domain, meprin/A5/mu 424 585 4.3E-18 T 20-04-2016 IPR000998 MAM domain GO:0016020 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 Pfam PF00801 PKD domain 330 383 1.6E-5 T 20-04-2016 IPR000601 PKD domain APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 Gene3D G3DSA:3.40.390.10 196 309 7.3E-7 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS04535 5df488062be8762e7535103a6de9afa6 673 SUPERFAMILY SSF49299 328 386 6.93E-11 T 20-04-2016 IPR000601 PKD domain APS56_RS08750 7aa30e6741e19fba43b2ca9c8e27ebe0 421 PANTHER PTHR10314 11 367 6.4E-161 T 20-04-2016 APS56_RS08750 7aa30e6741e19fba43b2ca9c8e27ebe0 421 Gene3D G3DSA:3.40.50.1100 103 346 3.3E-83 T 20-04-2016 APS56_RS08750 7aa30e6741e19fba43b2ca9c8e27ebe0 421 TIGRFAM TIGR02079 THD1: threonine dehydratase 14 421 3.0E-181 T 20-04-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APS56_RS08750 7aa30e6741e19fba43b2ca9c8e27ebe0 421 SUPERFAMILY SSF53686 8 365 1.3E-96 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS08750 7aa30e6741e19fba43b2ca9c8e27ebe0 421 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 28 315 8.7E-77 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS08750 7aa30e6741e19fba43b2ca9c8e27ebe0 421 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 328 414 9.9E-21 T 20-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APS56_RS08750 7aa30e6741e19fba43b2ca9c8e27ebe0 421 PANTHER PTHR10314:SF30 11 367 6.4E-161 T 20-04-2016 APS56_RS08750 7aa30e6741e19fba43b2ca9c8e27ebe0 421 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 50 63 - T 20-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APS56_RS04300 9798cec210373ea32e21a7814ae8654f 292 Gene3D G3DSA:3.40.50.300 6 290 3.1E-92 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04300 9798cec210373ea32e21a7814ae8654f 292 PIRSF PIRSF028756 2 292 3.0E-69 T 20-04-2016 IPR016898 Polyphosphate kinase 2 APS56_RS04300 9798cec210373ea32e21a7814ae8654f 292 SUPERFAMILY SSF52540 60 259 2.61E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04300 9798cec210373ea32e21a7814ae8654f 292 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 28 265 4.9E-58 T 20-04-2016 IPR022488 Polyphosphate kinase-2-related APS56_RS04300 9798cec210373ea32e21a7814ae8654f 292 PANTHER PTHR34383 25 138 2.4E-113 T 20-04-2016 APS56_RS04300 9798cec210373ea32e21a7814ae8654f 292 PANTHER PTHR34383 154 292 2.4E-113 T 20-04-2016 APS56_RS04300 9798cec210373ea32e21a7814ae8654f 292 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 12 279 3.2E-98 T 20-04-2016 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 PANTHER PTHR11669:SF8 133 268 4.2E-47 T 20-04-2016 APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 PANTHER PTHR11669:SF8 1 88 4.2E-47 T 20-04-2016 APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 Pfam PF13177 DNA polymerase III, delta subunit 8 210 4.7E-45 T 20-04-2016 APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 Gene3D G3DSA:3.40.50.300 3 83 9.1E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 Gene3D G3DSA:3.40.50.300 125 199 9.1E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 SUPERFAMILY SSF52540 126 245 2.26E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 SUPERFAMILY SSF52540 3 84 2.26E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 PANTHER PTHR11669 133 268 4.2E-47 T 20-04-2016 APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 PANTHER PTHR11669 1 88 4.2E-47 T 20-04-2016 APS56_RS10875 e93fe6dbf75a155308ea79f193f02f11 385 Gene3D G3DSA:1.10.8.60 200 245 5.0E-5 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 SUPERFAMILY SSF52540 450 653 4.67E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 Pfam PF00270 DEAD/DEAH box helicase 274 431 6.2E-18 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 Gene3D G3DSA:3.40.50.300 256 451 6.5E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 Gene3D G3DSA:3.40.50.300 452 637 1.4E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 Pfam PF00271 Helicase conserved C-terminal domain 475 587 1.2E-17 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 PANTHER PTHR24031:SF249 625 690 1.3E-120 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 PANTHER PTHR24031:SF249 300 601 1.3E-120 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 PANTHER PTHR24031:SF249 167 283 1.3E-120 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 PANTHER PTHR24031:SF249 18 51 1.3E-120 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 SUPERFAMILY SSF50249 3 178 1.97E-42 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 SUPERFAMILY SSF52540 185 451 1.53E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 SMART SM00487 266 457 6.4E-34 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 Gene3D G3DSA:2.40.50.140 46 142 3.2E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 PANTHER PTHR24031 625 690 1.3E-120 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 PANTHER PTHR24031 300 601 1.3E-120 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 PANTHER PTHR24031 167 283 1.3E-120 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 PANTHER PTHR24031 18 51 1.3E-120 T 20-04-2016 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 SMART SM00490 506 588 1.7E-19 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 663 2.2E-219 T 20-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 APS56_RS01105 503db8837d0aebef074ba9be101548b4 700 Pfam PF17191 RecG wedge domain 8 173 5.0E-21 T 20-04-2016 IPR033454 RecG, wedge domain APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PANTHER PTHR22600 226 520 4.5E-168 T 20-04-2016 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PIRSF PIRSF001093 8 519 1.6E-83 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PANTHER PTHR22600 1 209 4.5E-168 T 20-04-2016 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 Gene3D G3DSA:3.30.379.10 7 146 6.4E-28 T 20-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 Gene3D G3DSA:3.20.20.80 147 516 3.2E-118 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 SUPERFAMILY SSF55545 15 147 2.49E-23 T 20-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 149 499 6.1E-102 T 20-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PANTHER PTHR22600:SF21 1 209 4.5E-168 T 20-04-2016 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 SUPERFAMILY SSF51445 149 513 6.62E-114 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PRINTS PR00738 Glycosyl hydrolase family 20 signature 464 480 6.9E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PRINTS PR00738 Glycosyl hydrolase family 20 signature 482 499 6.9E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PRINTS PR00738 Glycosyl hydrolase family 20 signature 107 127 6.9E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PRINTS PR00738 Glycosyl hydrolase family 20 signature 313 326 6.9E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PRINTS PR00738 Glycosyl hydrolase family 20 signature 143 160 6.9E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PRINTS PR00738 Glycosyl hydrolase family 20 signature 172 193 6.9E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PRINTS PR00738 Glycosyl hydrolase family 20 signature 291 309 6.9E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PRINTS PR00738 Glycosyl hydrolase family 20 signature 243 260 6.9E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 26 146 2.6E-19 T 20-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS06265 1eaa0840bccab1a40b528f8f7e5592df 520 PANTHER PTHR22600:SF21 226 520 4.5E-168 T 20-04-2016 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 SUPERFAMILY SSF63411 486 701 2.37E-13 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 Gene3D G3DSA:3.30.830.10 766 903 3.9E-8 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 PANTHER PTHR11851:SF144 425 892 7.9E-71 T 20-04-2016 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 PANTHER PTHR11851:SF144 11 406 7.9E-71 T 20-04-2016 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 SUPERFAMILY SSF63411 745 908 8.9E-13 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 Pfam PF05193 Peptidase M16 inactive domain 180 354 6.7E-11 T 20-04-2016 IPR007863 Peptidase M16, C-terminal APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 Pfam PF05193 Peptidase M16 inactive domain 658 836 5.4E-9 T 20-04-2016 IPR007863 Peptidase M16, C-terminal APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 Pfam PF00675 Insulinase (Peptidase family M16) 30 152 2.0E-27 T 20-04-2016 IPR011765 Peptidase M16, N-terminal APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 PANTHER PTHR11851 425 892 7.9E-71 T 20-04-2016 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 PANTHER PTHR11851 11 406 7.9E-71 T 20-04-2016 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 Gene3D G3DSA:3.30.830.10 9 224 1.7E-46 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 Gene3D G3DSA:3.30.830.10 493 703 1.2E-12 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APS56_RS01970 7a5e1a8a10adc00cc3403e2786b50372 909 SUPERFAMILY SSF63411 10 225 5.68E-42 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 Pfam PF02310 B12 binding domain 583 695 1.3E-15 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 SUPERFAMILY SSF52242 548 706 2.62E-55 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 Gene3D G3DSA:3.20.20.240 26 494 1.5E-205 T 20-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 SUPERFAMILY SSF51703 23 543 1.96E-212 T 20-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 Gene3D G3DSA:3.40.50.280 549 707 3.4E-67 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 PANTHER PTHR23408 22 687 0.0 T 20-04-2016 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 Pfam PF01642 Methylmalonyl-CoA mutase 29 541 2.5E-232 T 20-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 580 705 5.1E-59 T 20-04-2016 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 PANTHER PTHR23408:SF1 22 687 0.0 T 20-04-2016 APS56_RS08030 df2e9e17f75fcbe054fdb53c1a658229 710 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 27 548 4.7E-266 T 20-04-2016 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 SUPERFAMILY SSF51905 2 197 3.63E-38 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 SUPERFAMILY SSF55124 507 645 5.89E-24 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 Gene3D G3DSA:3.50.50.60 109 312 4.2E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00397 Sirohaem Fe-binding site signature 683 701 1.0E-5 T 20-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00397 Sirohaem Fe-binding site signature 640 658 1.0E-5 T 20-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 286 2.6E-52 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PANTHER PTHR11493 1 259 1.9E-251 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PANTHER PTHR11493 424 838 1.9E-251 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 SUPERFAMILY SSF51905 152 314 7.61E-23 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 683 699 - T 20-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 SUPERFAMILY SSF56014 637 812 6.02E-45 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 Gene3D G3DSA:3.30.413.10 636 774 3.1E-31 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 636 775 5.9E-15 T 20-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 4 804 4.7E-300 T 20-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 Pfam PF04324 BFD-like [2Fe-2S] binding domain 429 477 2.8E-9 T 20-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PANTHER PTHR11493:SF52 1 259 1.9E-251 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PANTHER PTHR11493:SF52 424 838 1.9E-251 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 Gene3D G3DSA:3.50.50.60 1 108 3.6E-25 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PIRSF PIRSF037149 1 839 0.0 T 20-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 6.4E-19 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 6.4E-19 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 6.4E-19 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 6.4E-19 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.4E-19 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 564 625 2.8E-9 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 279 286 2.0E-8 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 2.0E-8 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.0E-8 T 20-04-2016 APS56_RS00900 684818d0d33a6a23a5b3543a30e20022 839 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 2.0E-8 T 20-04-2016 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 PANTHER PTHR26402 2 200 2.1E-50 T 20-04-2016 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 Pfam PF00072 Response regulator receiver domain 5 115 3.6E-22 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 SMART SM00448 2 115 3.3E-19 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 201 4.1E-19 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 SUPERFAMILY SSF52172 1 131 5.69E-26 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 SUPERFAMILY SSF46894 145 204 1.9E-17 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 5.3E-13 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 5.3E-13 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 5.3E-13 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 SMART SM00421 146 203 9.7E-19 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 Gene3D G3DSA:1.10.10.10 120 204 9.2E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13410 96f13a22df176949e718cae8ecc5471b 211 Gene3D G3DSA:3.40.50.2300 1 119 1.9E-26 T 20-04-2016 APS56_RS14330 6b9f1ecd4dce388a7678b3fa6076b59c 240 PANTHER PTHR12029 3 238 1.1E-47 T 20-04-2016 APS56_RS14330 6b9f1ecd4dce388a7678b3fa6076b59c 240 SUPERFAMILY SSF75217 90 238 2.68E-32 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS14330 6b9f1ecd4dce388a7678b3fa6076b59c 240 Pfam PF00588 SpoU rRNA Methylase family 96 233 7.9E-30 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APS56_RS14330 6b9f1ecd4dce388a7678b3fa6076b59c 240 SUPERFAMILY SSF55315 3 87 1.11E-12 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APS56_RS14330 6b9f1ecd4dce388a7678b3fa6076b59c 240 Gene3D G3DSA:3.30.1330.30 1 87 3.3E-25 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APS56_RS14330 6b9f1ecd4dce388a7678b3fa6076b59c 240 Gene3D G3DSA:3.40.1280.10 93 238 5.6E-36 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS07695 8ab755853309c6840ac020e3815f26ac 266 PANTHER PTHR31801 3 264 1.8E-105 T 20-04-2016 APS56_RS07695 8ab755853309c6840ac020e3815f26ac 266 PANTHER PTHR31801:SF3 3 264 1.8E-105 T 20-04-2016 APS56_RS07695 8ab755853309c6840ac020e3815f26ac 266 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 7 228 1.5E-33 T 20-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 APS56_RS07695 8ab755853309c6840ac020e3815f26ac 266 Gene3D G3DSA:3.60.160.10 1 249 2.2E-98 T 20-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 APS56_RS07695 8ab755853309c6840ac020e3815f26ac 266 SUPERFAMILY SSF51219 6 244 5.75E-81 T 20-04-2016 IPR016031 Tryptophan RNA-binding attenuator protein-like domain APS56_RS07695 8ab755853309c6840ac020e3815f26ac 266 Pfam PF01987 Mitochondrial biogenesis AIM24 8 225 4.7E-67 T 20-04-2016 IPR002838 Mitochondrial biogenesis protein AIM24 APS56_RS09455 2a81eecef5fed4987495530013322999 409 Gene3D G3DSA:1.10.3430.10 5 382 2.0E-116 T 20-04-2016 IPR029020 Ammonium/urea transporter APS56_RS09455 2a81eecef5fed4987495530013322999 409 PANTHER PTHR11730:SF6 6 409 4.7E-146 T 20-04-2016 APS56_RS09455 2a81eecef5fed4987495530013322999 409 PANTHER PTHR11730 6 409 4.7E-146 T 20-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APS56_RS09455 2a81eecef5fed4987495530013322999 409 SUPERFAMILY SSF111352 5 382 2.22E-109 T 20-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APS56_RS09455 2a81eecef5fed4987495530013322999 409 Pfam PF00909 Ammonium Transporter Family 9 401 7.3E-114 T 20-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APS56_RS09455 2a81eecef5fed4987495530013322999 409 ProSitePatterns PS01219 Ammonium transporters signature. 164 189 - T 20-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 APS56_RS09455 2a81eecef5fed4987495530013322999 409 TIGRFAM TIGR00836 amt: ammonium transporter 7 401 1.1E-122 T 20-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APS56_RS00840 3c994592eecf138ed5ee87d043075c63 450 Gene3D G3DSA:3.40.50.300 2 207 5.7E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00840 3c994592eecf138ed5ee87d043075c63 450 Gene3D G3DSA:3.40.50.300 208 373 1.1E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00840 3c994592eecf138ed5ee87d043075c63 450 SUPERFAMILY SSF52540 71 358 1.28E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00840 3c994592eecf138ed5ee87d043075c63 450 PANTHER PTHR24031 2 392 5.3E-146 T 20-04-2016 APS56_RS00840 3c994592eecf138ed5ee87d043075c63 450 Pfam PF00270 DEAD/DEAH box helicase 25 190 4.0E-47 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS00840 3c994592eecf138ed5ee87d043075c63 450 Pfam PF00271 Helicase conserved C-terminal domain 228 337 1.2E-30 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS00840 3c994592eecf138ed5ee87d043075c63 450 SMART SM00487 20 218 1.7E-56 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS00840 3c994592eecf138ed5ee87d043075c63 450 SMART SM00490 256 338 4.9E-28 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS08295 3022d03bd4eff067d58dc338a6d4876b 61 PIRSF PIRSF039008 1 61 2.7E-21 T 20-04-2016 IPR026042 Stress response protein YjbJ APS56_RS08295 3022d03bd4eff067d58dc338a6d4876b 61 Gene3D G3DSA:1.10.1470.10 1 58 7.4E-22 T 20-04-2016 IPR008462 CsbD-like APS56_RS08295 3022d03bd4eff067d58dc338a6d4876b 61 Pfam PF05532 CsbD-like 5 55 2.7E-18 T 20-04-2016 IPR008462 CsbD-like APS56_RS08295 3022d03bd4eff067d58dc338a6d4876b 61 SUPERFAMILY SSF69047 1 57 1.57E-18 T 20-04-2016 IPR008462 CsbD-like APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Pfam PF04997 RNA polymerase Rpb1, domain 1 11 359 9.5E-84 T 20-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 PANTHER PTHR19376 1181 1264 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 PANTHER PTHR19376 1346 1406 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 PANTHER PTHR19376 1 972 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 PANTHER PTHR19376 1003 1160 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1419 10.208 T 20-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 PANTHER PTHR19376:SF32 1181 1264 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 PANTHER PTHR19376:SF32 1346 1406 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 PANTHER PTHR19376:SF32 1 972 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 PANTHER PTHR19376:SF32 1003 1160 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Pfam PF04998 RNA polymerase Rpb1, domain 5 777 1296 1.7E-68 T 20-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 SUPERFAMILY SSF64484 1136 1295 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 SUPERFAMILY SSF64484 1337 1410 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 SUPERFAMILY SSF64484 11 955 0.0 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 15 1294 0.0 T 20-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Gene3D G3DSA:2.40.40.20 434 505 1.9E-35 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Gene3D G3DSA:2.40.40.20 366 393 1.9E-35 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Gene3D G3DSA:2.40.50.100 1159 1213 6.0E-9 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Gene3D G3DSA:2.40.50.100 1080 1124 2.4E-4 T 20-04-2016 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Pfam PF04983 RNA polymerase Rpb1, domain 3 506 660 1.1E-23 T 20-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Pfam PF05000 RNA polymerase Rpb1, domain 4 689 774 3.3E-16 T 20-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Pfam PF00623 RNA polymerase Rpb1, domain 2 361 415 1.5E-8 T 20-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 Pfam PF00623 RNA polymerase Rpb1, domain 2 412 502 1.9E-25 T 20-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS05525 3b4f33b8960b69c6e1930ffb294269db 1432 SMART SM00663 252 531 3.7E-168 T 20-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS10955 e3cef591df48e6b22845b3a600f4db3d 148 PANTHER PTHR23091:SF275 9 147 2.5E-30 T 20-04-2016 APS56_RS10955 e3cef591df48e6b22845b3a600f4db3d 148 Gene3D G3DSA:3.40.630.30 2 146 2.5E-40 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS10955 e3cef591df48e6b22845b3a600f4db3d 148 SUPERFAMILY SSF55729 1 147 3.48E-32 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS10955 e3cef591df48e6b22845b3a600f4db3d 148 Pfam PF13673 Acetyltransferase (GNAT) domain 26 147 4.4E-15 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS10955 e3cef591df48e6b22845b3a600f4db3d 148 PANTHER PTHR23091 9 147 2.5E-30 T 20-04-2016 APS56_RS09225 5ab5416faf4b0758cd3dd0d2b8932dca 65 SUPERFAMILY SSF158446 7 61 3.53E-11 T 20-04-2016 APS56_RS09225 5ab5416faf4b0758cd3dd0d2b8932dca 65 Pfam PF05635 23S rRNA-intervening sequence protein 11 61 7.2E-10 T 20-04-2016 IPR012657 23S rRNA-intervening sequence protein APS56_RS09225 5ab5416faf4b0758cd3dd0d2b8932dca 65 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 13 61 2.1E-8 T 20-04-2016 IPR012657 23S rRNA-intervening sequence protein APS56_RS09225 5ab5416faf4b0758cd3dd0d2b8932dca 65 Gene3D G3DSA:1.20.1440.60 7 60 1.5E-8 T 20-04-2016 IPR012657 23S rRNA-intervening sequence protein APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 SUPERFAMILY SSF52096 445 506 1.19E-41 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 SUPERFAMILY SSF52096 301 416 1.19E-41 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 305 516 8.8E-55 T 20-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 PIRSF PIRSF001217 1 586 3.6E-174 T 20-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 PANTHER PTHR33209 72 523 1.1E-153 T 20-04-2016 APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 SUPERFAMILY SSF52096 43 162 4.14E-23 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 SUPERFAMILY SSF52096 193 263 4.14E-23 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 PANTHER PTHR33209:SF1 72 523 1.1E-153 T 20-04-2016 APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 Pfam PF01343 Peptidase family S49 122 275 2.6E-28 T 20-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 Pfam PF01343 Peptidase family S49 369 519 1.2E-43 T 20-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 9 565 1.4E-142 T 20-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 Gene3D G3DSA:3.90.226.10 21 158 6.2E-53 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 Gene3D G3DSA:3.90.226.10 298 408 4.2E-61 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 Gene3D G3DSA:3.90.226.10 201 289 6.2E-53 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00205 283f33fef59fe750a8d05b881d28638b 586 Gene3D G3DSA:3.90.226.10 446 524 4.2E-61 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 SUPERFAMILY SSF51445 33 342 4.33E-92 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 Pfam PF01120 Alpha-L-fucosidase 22 338 6.7E-85 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 PRINTS PR00741 Glycosyl hydrolase family 29 signature 325 347 5.1E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 PRINTS PR00741 Glycosyl hydrolase family 29 signature 115 131 5.1E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 PRINTS PR00741 Glycosyl hydrolase family 29 signature 292 313 5.1E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 Gene3D G3DSA:3.20.20.80 32 342 4.0E-95 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 PANTHER PTHR10030 7 345 2.5E-60 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 PANTHER PTHR10030:SF25 7 345 2.5E-60 T 20-04-2016 APS56_RS04605 93f9d38f50c30f3ffa54bb0c4552c832 528 SMART SM00812 23 382 4.4E-88 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS00270 a82d632491029af8c650c29f79bc36f2 208 PANTHER PTHR20855 5 208 9.1E-59 T 20-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APS56_RS00270 a82d632491029af8c650c29f79bc36f2 208 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 8 207 2.7E-63 T 20-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 APS56_RS00270 a82d632491029af8c650c29f79bc36f2 208 PANTHER PTHR20855:SF3 5 208 9.1E-59 T 20-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 APS56_RS00270 a82d632491029af8c650c29f79bc36f2 208 Pfam PF03006 Haemolysin-III related 7 200 1.2E-38 T 20-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 PANTHER PTHR24423 345 736 5.2E-126 T 20-04-2016 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SUPERFAMILY SSF47384 353 432 1.06E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SMART SM00388 366 431 6.4E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Pfam PF00512 His Kinase A (phospho-acceptor) domain 367 430 1.3E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SMART SM00387 478 594 5.1E-36 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SUPERFAMILY SSF52172 619 737 1.57E-32 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Gene3D G3DSA:3.40.50.2300 619 740 7.9E-37 T 20-04-2016 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Gene3D G3DSA:1.25.40.10 51 271 4.2E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SMART SM00028 156 189 4.8 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SMART SM00028 116 149 50.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SMART SM00028 76 109 1.3 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SMART SM00028 196 229 130.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SMART SM00448 621 732 1.0E-29 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Pfam PF12862 Anaphase-promoting complex subunit 5 192 242 1.2 T 20-04-2016 IPR026000 Anaphase-promoting complex subunit 5 UniPathway: UPA00143 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Gene3D G3DSA:3.30.565.10 437 592 2.5E-44 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Pfam PF00072 Response regulator receiver domain 623 732 1.2E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SUPERFAMILY SSF48452 49 191 2.37E-13 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SUPERFAMILY SSF55874 420 596 4.71E-43 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 SUPERFAMILY SSF48452 153 266 4.85E-13 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Pfam PF13181 Tetratricopeptide repeat 78 106 0.01 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Gene3D G3DSA:1.10.287.130 359 427 1.2E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 593 3.0E-28 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 591 7.9E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 572 7.9E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS14715 c1bacf10c6e891a7775b0e52aba030d3 744 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 533 7.9E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01925 fc2a443a18d8d7a26d8489c4e3240973 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 239 3.3E-71 T 20-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APS56_RS01925 fc2a443a18d8d7a26d8489c4e3240973 244 SUPERFAMILY SSF51366 1 242 6.46E-60 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APS56_RS01925 fc2a443a18d8d7a26d8489c4e3240973 244 PANTHER PTHR21235:SF15 1 244 1.8E-87 T 20-04-2016 APS56_RS01925 fc2a443a18d8d7a26d8489c4e3240973 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 243 31.424 T 20-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APS56_RS01925 fc2a443a18d8d7a26d8489c4e3240973 244 Pfam PF00977 Histidine biosynthesis protein 2 236 1.7E-62 T 20-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APS56_RS01925 fc2a443a18d8d7a26d8489c4e3240973 244 Gene3D G3DSA:3.20.20.70 1 243 5.0E-77 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS01925 fc2a443a18d8d7a26d8489c4e3240973 244 PANTHER PTHR21235 1 244 1.8E-87 T 20-04-2016 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 142 9.7E-42 T 20-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 PANTHER PTHR11540 1 299 2.6E-103 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 PIRSF PIRSF000102 1 307 1.5E-93 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 PANTHER PTHR11540:SF16 1 299 2.6E-103 T 20-04-2016 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 297 2.3E-21 T 20-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 SUPERFAMILY SSF56327 143 302 6.34E-43 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 1.5E-30 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 1.5E-30 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 1.5E-30 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 1.5E-30 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 1.5E-30 T 20-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 Gene3D G3DSA:3.90.110.10 144 304 1.1E-47 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 1 302 2.9E-110 T 20-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 Gene3D G3DSA:3.40.50.720 1 143 2.2E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 SUPERFAMILY SSF51735 1 142 7.07E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13830 9de1642b56f64cbeab98d272c85a41c6 308 Hamap MF_00487 Malate dehydrogenase [mdh]. 1 307 37.618 T 20-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APS56_RS01750 392115698faa67ed878dfe01c45c3537 301 PANTHER PTHR30005 7 291 1.3E-47 T 20-04-2016 APS56_RS01750 392115698faa67ed878dfe01c45c3537 301 PANTHER PTHR30005:SF0 7 291 1.3E-47 T 20-04-2016 APS56_RS01750 392115698faa67ed878dfe01c45c3537 301 Gene3D G3DSA:3.30.420.150 137 290 1.7E-23 T 20-04-2016 APS56_RS01750 392115698faa67ed878dfe01c45c3537 301 SUPERFAMILY SSF53067 5 125 2.04E-30 T 20-04-2016 APS56_RS01750 392115698faa67ed878dfe01c45c3537 301 Gene3D G3DSA:3.30.420.40 3 125 7.6E-34 T 20-04-2016 APS56_RS01750 392115698faa67ed878dfe01c45c3537 301 SUPERFAMILY SSF53067 137 293 7.07E-33 T 20-04-2016 APS56_RS01750 392115698faa67ed878dfe01c45c3537 301 Pfam PF02541 Ppx/GppA phosphatase family 43 290 2.5E-31 T 20-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APS56_RS07065 aedd675714dd1c0f5c2d28db4793454d 527 Gene3D G3DSA:3.40.50.300 306 485 4.1E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07065 aedd675714dd1c0f5c2d28db4793454d 527 Gene3D G3DSA:3.40.50.300 102 174 4.1E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07065 aedd675714dd1c0f5c2d28db4793454d 527 SUPERFAMILY SSF52540 101 495 1.78E-26 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07065 aedd675714dd1c0f5c2d28db4793454d 527 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 103 447 6.2E-14 T 20-04-2016 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain APS56_RS12430 9a5a3ea3fa474b6367282063c02f1562 106 PANTHER PTHR10815 7 105 3.6E-30 T 20-04-2016 APS56_RS12430 9a5a3ea3fa474b6367282063c02f1562 106 SUPERFAMILY SSF46767 7 89 1.11E-21 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APS56_RS12430 9a5a3ea3fa474b6367282063c02f1562 106 Gene3D G3DSA:1.10.10.10 7 91 2.2E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12430 9a5a3ea3fa474b6367282063c02f1562 106 PANTHER PTHR10815:SF2 7 105 3.6E-30 T 20-04-2016 APS56_RS12430 9a5a3ea3fa474b6367282063c02f1562 106 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 8 86 8.0E-14 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APS56_RS12430 9a5a3ea3fa474b6367282063c02f1562 106 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 8 88 1.5E-24 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APS56_RS03690 f14a99e096c9f39c423615c0ab407ac9 852 SUPERFAMILY SSF56059 59 223 4.94E-20 T 20-04-2016 APS56_RS03690 f14a99e096c9f39c423615c0ab407ac9 852 SUPERFAMILY SSF56059 330 453 4.94E-20 T 20-04-2016 APS56_RS03690 f14a99e096c9f39c423615c0ab407ac9 852 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 510 835 3.6E-53 T 20-04-2016 IPR007296 Domain of unknown function DUF403 APS56_RS03690 f14a99e096c9f39c423615c0ab407ac9 852 PANTHER PTHR34595:SF1 5 848 4.3E-219 T 20-04-2016 APS56_RS03690 f14a99e096c9f39c423615c0ab407ac9 852 PANTHER PTHR34595 5 848 4.3E-219 T 20-04-2016 APS56_RS03690 f14a99e096c9f39c423615c0ab407ac9 852 Pfam PF14403 Circularly permuted ATP-grasp type 2 85 461 7.6E-148 T 20-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 Gene3D G3DSA:3.30.63.10 53 92 2.5E-24 T 20-04-2016 APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 SMART SM00072 8 189 5.8E-47 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 ProSitePatterns PS00856 Guanylate kinase-like signature. 44 61 - T 20-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 Gene3D G3DSA:3.40.50.300 6 19 1.8E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 Gene3D G3DSA:3.40.50.300 93 190 1.8E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 Gene3D G3DSA:3.40.50.300 20 52 4.9E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 PANTHER PTHR23117:SF13 8 184 9.9E-70 T 20-04-2016 APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 Hamap MF_00328 Guanylate kinase [gmk]. 7 193 33.128 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 SUPERFAMILY SSF52540 7 186 7.94E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 10 188 8.2E-65 T 20-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 PANTHER PTHR23117 8 184 9.9E-70 T 20-04-2016 APS56_RS10005 dfea8bc2ecc931831e831a9edc938a57 195 Pfam PF00625 Guanylate kinase 9 186 2.8E-47 T 20-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 Gene3D G3DSA:2.130.10.10 166 355 1.2E-11 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 SUPERFAMILY SSF48452 27 117 3.46E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 SUPERFAMILY SSF82171 221 422 5.49E-15 T 20-04-2016 APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 Pfam PF00691 OmpA family 527 617 3.8E-18 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 SUPERFAMILY SSF103088 513 635 1.83E-26 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 Pfam PF07676 WD40-like Beta Propeller Repeat 225 239 0.056 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 Pfam PF07676 WD40-like Beta Propeller Repeat 285 311 0.0035 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 Gene3D G3DSA:1.25.40.10 27 119 3.8E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 PRINTS PR01021 OMPA domain signature 574 590 1.8E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 PRINTS PR01021 OMPA domain signature 559 574 1.8E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 PRINTS PR01021 OMPA domain signature 528 550 1.8E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 Gene3D G3DSA:3.30.1330.60 518 635 1.2E-29 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 PANTHER PTHR30128 519 635 9.6E-26 T 20-04-2016 APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 Gene3D G3DSA:2.60.40.1120 428 512 7.9E-6 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS01690 6abd07cc74454a7fc9cdbbb2c1bc94c5 639 SUPERFAMILY SSF49478 428 494 7.06E-6 T 20-04-2016 APS56_RS07770 5e3b5445df835808cb2a6638e160b8de 249 PANTHER PTHR30352:SF9 9 246 5.1E-95 T 20-04-2016 APS56_RS07770 5e3b5445df835808cb2a6638e160b8de 249 Pfam PF13353 4Fe-4S single cluster domain 20 125 6.6E-22 T 20-04-2016 APS56_RS07770 5e3b5445df835808cb2a6638e160b8de 249 Gene3D G3DSA:3.80.30.10 73 246 3.5E-56 T 20-04-2016 APS56_RS07770 5e3b5445df835808cb2a6638e160b8de 249 SUPERFAMILY SSF102114 25 216 3.53E-26 T 20-04-2016 APS56_RS07770 5e3b5445df835808cb2a6638e160b8de 249 Pfam PF04055 Radical SAM superfamily 27 178 4.6E-22 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS07770 5e3b5445df835808cb2a6638e160b8de 249 PANTHER PTHR30352 9 246 5.1E-95 T 20-04-2016 APS56_RS07770 5e3b5445df835808cb2a6638e160b8de 249 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 9 241 2.9E-83 T 20-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 APS56_RS07770 5e3b5445df835808cb2a6638e160b8de 249 ProSitePatterns PS01087 Radical activating enzymes signature. 21 42 - T 20-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 Gene3D G3DSA:1.20.1640.10 299 501 8.8E-45 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 Gene3D G3DSA:3.30.2090.10 797 885 5.5E-13 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 Gene3D G3DSA:3.30.2090.10 197 279 1.8E-15 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PRINTS PR00702 Acriflavin resistance protein family signature 49 67 2.1E-31 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.1E-31 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.1E-31 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PRINTS PR00702 Acriflavin resistance protein family signature 399 423 2.1E-31 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PRINTS PR00702 Acriflavin resistance protein family signature 21 45 2.1E-31 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PRINTS PR00702 Acriflavin resistance protein family signature 345 368 2.1E-31 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 SUPERFAMILY SSF82866 305 502 8.37E-40 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 Pfam PF00873 AcrB/AcrD/AcrF family 568 1143 2.1E-60 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 Pfam PF00873 AcrB/AcrD/AcrF family 15 509 8.4E-99 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 SUPERFAMILY SSF82866 889 1149 2.49E-36 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 SUPERFAMILY SSF82714 798 884 6.28E-11 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PANTHER PTHR32063 556 660 1.1E-243 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PANTHER PTHR32063 677 1088 1.1E-243 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PANTHER PTHR32063 12 511 1.1E-243 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 PANTHER PTHR32063 1107 1167 1.1E-243 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 SUPERFAMILY SSF82693 282 339 1.41E-7 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 SUPERFAMILY SSF82714 198 278 2.22E-14 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 Gene3D G3DSA:1.10.3850.10 894 1145 1.6E-50 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 SUPERFAMILY SSF82693 54 126 1.36E-15 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 Gene3D G3DSA:3.30.70.1430 54 125 2.7E-16 T 20-04-2016 APS56_RS09230 9bcbf74eb1b3eaed818d064c6cb99217 1170 SUPERFAMILY SSF82693 155 196 1.41E-7 T 20-04-2016 APS56_RS08000 4326c204d45e0787c14a75d80aaddd29 336 SUPERFAMILY SSF51445 22 332 6.81E-40 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS08000 4326c204d45e0787c14a75d80aaddd29 336 Gene3D G3DSA:3.20.20.80 162 309 1.5E-7 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS08000 4326c204d45e0787c14a75d80aaddd29 336 Pfam PF13547 GTA TIM-barrel-like domain 130 217 8.4E-7 T 20-04-2016 IPR025195 GTA TIM-barrel-like domain APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SUPERFAMILY SSF51126 65 119 4.49E-41 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SUPERFAMILY SSF51126 310 623 4.49E-41 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 Pfam PF13229 Right handed beta helix region 342 477 8.5E-13 T 20-04-2016 APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 PANTHER PTHR36453:SF1 18 675 8.2E-126 T 20-04-2016 APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 Gene3D G3DSA:2.160.20.10 296 410 6.3E-22 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 Gene3D G3DSA:2.160.20.10 10 145 6.3E-22 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 Gene3D G3DSA:2.160.20.10 411 652 1.6E-9 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 PANTHER PTHR36453 18 675 8.2E-126 T 20-04-2016 APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SMART SM00710 404 431 260.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SMART SM00710 308 347 3600.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SMART SM00710 493 529 180.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SMART SM00710 372 394 0.51 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SMART SM00710 348 370 920.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SMART SM00710 432 453 1400.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02935 d6144bfc0567bbf43f225955eb35e616 705 SMART SM00710 463 491 670.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS10535 a4d6373e7538726f0350fb028276051d 233 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 20-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 APS56_RS10535 a4d6373e7538726f0350fb028276051d 233 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 215 2.5E-83 T 20-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 APS56_RS10535 a4d6373e7538726f0350fb028276051d 233 Gene3D G3DSA:3.40.1080.10 3 216 3.4E-95 T 20-04-2016 APS56_RS10535 a4d6373e7538726f0350fb028276051d 233 SUPERFAMILY SSF100950 1 226 6.63E-84 T 20-04-2016 APS56_RS10535 a4d6373e7538726f0350fb028276051d 233 PANTHER PTHR13707:SF23 1 230 7.4E-124 T 20-04-2016 APS56_RS10535 a4d6373e7538726f0350fb028276051d 233 PANTHER PTHR13707 1 230 7.4E-124 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APS56_RS10535 a4d6373e7538726f0350fb028276051d 233 Pfam PF01144 Coenzyme A transferase 7 215 7.7E-72 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APS56_RS10535 a4d6373e7538726f0350fb028276051d 233 SMART SM00882 6 217 2.5E-84 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SUPERFAMILY SSF55785 272 378 5.68E-14 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SUPERFAMILY SSF55785 139 246 1.61E-23 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 4 130 2.2E-20 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 135 254 5.8E-18 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 252 377 3.5E-17 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 PANTHER PTHR24423 7 246 3.6E-84 T 20-04-2016 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 PANTHER PTHR24423 380 621 3.6E-84 T 20-04-2016 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SUPERFAMILY SSF55785 18 130 4.67E-19 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 515 621 2.5E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Gene3D G3DSA:1.10.287.130 393 454 1.8E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SMART SM00091 131 200 0.0013 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SMART SM00091 7 73 1.2E-9 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Gene3D G3DSA:3.30.450.20 5 121 4.1E-18 T 20-04-2016 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Gene3D G3DSA:3.30.565.10 455 622 1.5E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Gene3D G3DSA:3.30.450.20 249 368 5.0E-12 T 20-04-2016 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Pfam PF00512 His Kinase A (phospho-acceptor) domain 402 469 1.8E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SUPERFAMILY SSF47384 387 470 8.04E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SUPERFAMILY SSF55874 459 622 8.51E-38 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Pfam PF13426 PAS domain 142 246 3.4E-18 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Pfam PF13426 PAS domain 18 122 9.2E-13 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Pfam PF13426 PAS domain 273 369 4.0E-6 T 20-04-2016 IPR000014 PAS domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 Gene3D G3DSA:3.30.450.20 142 246 2.8E-31 T 20-04-2016 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SMART SM00086 83 123 14.0 T 20-04-2016 IPR001610 PAC motif APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SMART SM00086 330 370 0.0041 T 20-04-2016 IPR001610 PAC motif APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SMART SM00086 206 248 7.8E-9 T 20-04-2016 IPR001610 PAC motif APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SMART SM00387 514 624 7.6E-26 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 SMART SM00388 401 469 4.6E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 579 1.9E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 602 1.9E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 565 1.9E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00620 82cfcf28f8ef9165d3c2daac5333b2b8 626 PRINTS PR00344 Bacterial sensor protein C-terminal signature 608 621 1.9E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Pfam PF00005 ABC transporter 607 847 3.0E-9 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:3.30.1490.20 208 257 1.3E-11 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:3.30.1490.20 141 163 1.3E-11 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 PANTHER PTHR32282 11 927 0.0 T 20-04-2016 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 SUPERFAMILY SSF52540 597 898 3.22E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:3.40.50.300 13 61 2.1E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:3.40.50.300 594 652 4.5E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:3.40.50.300 465 584 2.1E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:3.40.50.300 807 926 4.5E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:1.20.1580.10 102 139 5.2E-50 T 20-04-2016 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:1.20.1580.10 394 464 5.2E-50 T 20-04-2016 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:1.20.1580.10 258 290 5.2E-50 T 20-04-2016 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 ProSitePatterns PS00211 ABC transporters family signature. 816 830 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 SUPERFAMILY SSF52540 417 556 1.9E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 SUPERFAMILY SSF52540 18 216 1.9E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 13 911 0.0 T 20-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:1.10.8.280 294 393 1.3E-17 T 20-04-2016 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 Gene3D G3DSA:1.20.1580.10 678 806 1.9E-46 T 20-04-2016 APS56_RS02305 b46d2ce400fdd39fc198877139bbd6a9 927 PANTHER PTHR32282:SF2 11 927 0.0 T 20-04-2016 APS56_RS06370 59fa659b202dbf874f3c696986871353 141 Pfam PF00583 Acetyltransferase (GNAT) family 51 130 1.2E-11 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS06370 59fa659b202dbf874f3c696986871353 141 SUPERFAMILY SSF55729 4 136 2.49E-25 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS06370 59fa659b202dbf874f3c696986871353 141 Gene3D G3DSA:3.40.630.30 1 140 1.8E-23 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS03480 9b3ce5b569df8c55914bccb7b2219116 293 SUPERFAMILY SSF53613 1 288 3.12E-61 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS03480 9b3ce5b569df8c55914bccb7b2219116 293 PANTHER PTHR10584:SF188 1 281 4.3E-67 T 20-04-2016 APS56_RS03480 9b3ce5b569df8c55914bccb7b2219116 293 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 22 46 - T 20-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APS56_RS03480 9b3ce5b569df8c55914bccb7b2219116 293 Pfam PF00294 pfkB family carbohydrate kinase 9 281 2.3E-50 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APS56_RS03480 9b3ce5b569df8c55914bccb7b2219116 293 Gene3D G3DSA:3.40.1190.20 1 291 1.8E-62 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS03480 9b3ce5b569df8c55914bccb7b2219116 293 PANTHER PTHR10584 1 281 4.3E-67 T 20-04-2016 APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 PANTHER PTHR11907:SF0 107 382 2.3E-68 T 20-04-2016 APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 PANTHER PTHR11907:SF0 410 523 2.3E-68 T 20-04-2016 APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 Gene3D G3DSA:3.60.20.10 8 307 1.7E-46 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 SUPERFAMILY SSF56235 80 193 9.44E-40 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 SUPERFAMILY SSF56235 221 309 9.44E-40 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 PANTHER PTHR11907 107 382 2.3E-68 T 20-04-2016 APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 PANTHER PTHR11907 410 523 2.3E-68 T 20-04-2016 APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 SUPERFAMILY SSF53271 320 393 4.81E-20 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 SUPERFAMILY SSF53271 426 530 4.81E-20 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 Gene3D G3DSA:3.40.50.2020 336 399 3.0E-20 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 Gene3D G3DSA:3.40.50.2020 451 517 3.0E-20 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS11385 4b7c4be889647cf3441c0543d6be8a90 632 Pfam PF13537 Glutamine amidotransferase domain 146 278 5.6E-7 T 20-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 PANTHER PTHR11455:SF18 2 432 1.1E-164 T 20-04-2016 APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 Gene3D G3DSA:1.10.579.10 265 432 2.8E-67 T 20-04-2016 APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 305 317 - T 20-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 Pfam PF00875 DNA photolyase 7 163 6.1E-43 T 20-04-2016 IPR006050 DNA photolyase, N-terminal APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 SUPERFAMILY SSF48173 212 434 1.44E-90 T 20-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 Gene3D G3DSA:3.40.50.620 2 146 2.4E-47 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 Gene3D G3DSA:1.25.40.80 147 264 3.4E-26 T 20-04-2016 APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 PRINTS PR00147 DNA photolyase signature 143 159 2.9E-26 T 20-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 PRINTS PR00147 DNA photolyase signature 325 343 2.9E-26 T 20-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 PRINTS PR00147 DNA photolyase signature 305 321 2.9E-26 T 20-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 PRINTS PR00147 DNA photolyase signature 364 378 2.9E-26 T 20-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 PANTHER PTHR11455 2 432 1.1E-164 T 20-04-2016 APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 Pfam PF03441 FAD binding domain of DNA photolyase 256 430 1.0E-73 T 20-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain APS56_RS15860 666bbabfc73d6d654afb5d2e58d58a2a 435 SUPERFAMILY SSF52425 3 178 5.63E-51 T 20-04-2016 IPR006050 DNA photolyase, N-terminal APS56_RS15655 4a3950cb2421e89a89a2d0bf383f8613 340 Gene3D G3DSA:3.40.50.300 6 223 3.7E-14 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15655 4a3950cb2421e89a89a2d0bf383f8613 340 SUPERFAMILY SSF52540 6 335 4.65E-22 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03440 d63406ae0241595a69d99b2c216ad612 114 Gene3D G3DSA:3.40.250.10 11 113 1.1E-27 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS03440 d63406ae0241595a69d99b2c216ad612 114 Pfam PF00581 Rhodanese-like domain 23 113 1.4E-18 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS03440 d63406ae0241595a69d99b2c216ad612 114 SUPERFAMILY SSF52821 5 113 2.1E-28 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS03440 d63406ae0241595a69d99b2c216ad612 114 SMART SM00450 21 114 7.6E-16 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:3.40.50.300 597 770 1.2E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 ProSitePatterns PS01312 SecA family signature. 680 695 - T 20-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:1.10.3060.10 940 1018 6.2E-42 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:1.10.3060.10 799 897 6.2E-42 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SMART SM00957 8 582 3.3E-236 T 20-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF81886 946 1029 1.57E-53 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF81886 771 899 1.57E-53 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:3.40.50.300 169 319 8.2E-116 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:3.40.50.300 549 596 8.2E-116 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:3.40.50.300 105 123 8.2E-116 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:3.40.50.300 5 64 8.2E-116 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF52540 597 769 2.23E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Hamap MF_01382 Protein translocase subunit SecA [secA]. 7 1021 19.481 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF52540 103 125 1.03E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF52540 548 595 1.03E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF52540 12 59 1.03E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 PRINTS PR00906 SecA protein signature 519 541 4.5E-34 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 PRINTS PR00906 SecA protein signature 556 573 4.5E-34 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 PRINTS PR00906 SecA protein signature 593 606 4.5E-34 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 PRINTS PR00906 SecA protein signature 108 132 4.5E-34 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 PANTHER PTHR30612 466 1083 0.0 T 20-04-2016 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 PANTHER PTHR30612 110 124 0.0 T 20-04-2016 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 PANTHER PTHR30612 13 67 0.0 T 20-04-2016 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 PANTHER PTHR30612 170 367 0.0 T 20-04-2016 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Pfam PF07517 SecA DEAD-like domain 9 582 1.9E-124 T 20-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Pfam PF01043 SecA preprotein cross-linking domain 398 538 1.0E-36 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SMART SM00958 410 538 4.9E-34 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:3.90.1440.10 402 448 1.3E-39 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Gene3D G3DSA:3.90.1440.10 480 547 1.3E-39 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 Pfam PF07516 SecA Wing and Scaffold domain 769 1017 3.0E-54 T 20-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF52540 171 319 1.03E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 89 696 1.5E-196 T 20-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF81767 482 547 5.49E-31 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APS56_RS05440 962756a28c941f240295ecdb96bd22fe 1117 SUPERFAMILY SSF81767 403 450 5.49E-31 T 20-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 PANTHER PTHR11777:SF9 1 869 0.0 T 20-04-2016 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 852 8.4E-276 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 870 154.798 T 20-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 Pfam PF01411 tRNA synthetases class II (A) 5 544 1.7E-202 T 20-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 234 247 1.1E-29 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 284 300 1.1E-29 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 308 321 1.1E-29 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 1.1E-29 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 207 218 1.1E-29 T 20-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 SMART SM00863 652 694 8.0E-19 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 SUPERFAMILY SSF55186 551 708 3.14E-43 T 20-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 694 2.2E-16 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 SUPERFAMILY SSF50447 460 542 2.22E-14 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 SUPERFAMILY SSF101353 254 468 3.92E-66 T 20-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 SUPERFAMILY SSF55681 2 253 2.11E-99 T 20-04-2016 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 Pfam PF02272 DHHA1 domain 798 865 1.1E-7 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 Gene3D G3DSA:3.30.930.10 1 249 1.2E-113 T 20-04-2016 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 Gene3D G3DSA:3.30.980.10 670 685 1.9E-4 T 20-04-2016 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 Gene3D G3DSA:3.30.980.10 558 619 1.9E-4 T 20-04-2016 APS56_RS13485 fc92f93f942112980f7192ab4f4d4867 870 PANTHER PTHR11777 1 869 0.0 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82693 136 182 1.36E-21 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82693 272 328 1.36E-21 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 Gene3D G3DSA:3.30.70.1430 38 139 9.5E-32 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 Gene3D G3DSA:3.30.2090.10 182 273 4.9E-22 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82866 837 1027 1.7E-39 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 Gene3D G3DSA:1.10.3850.10 816 1027 8.1E-51 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82693 674 723 2.67E-19 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82693 810 858 2.67E-19 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82866 294 496 1.44E-48 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82693 568 673 1.65E-26 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PANTHER PTHR32063:SF9 1 1035 0.0 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1036 0.0 T 20-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82693 38 131 1.99E-25 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 Gene3D G3DSA:3.30.2090.10 724 810 3.1E-15 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82714 183 269 3.53E-16 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 SUPERFAMILY SSF82714 724 810 1.02E-13 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 4.8E-93 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 PANTHER PTHR32063 1 1035 0.0 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 Gene3D G3DSA:3.30.70.1430 570 673 7.6E-27 T 20-04-2016 APS56_RS11620 66d382d779db7eaa165ef1e09366963b 1045 Gene3D G3DSA:1.20.1640.10 291 501 1.3E-59 T 20-04-2016 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 18 424 8.5E-110 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 Pfam PF08245 Mur ligase middle domain 96 275 2.7E-42 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 Pfam PF02875 Mur ligase family, glutamate ligase domain 298 375 5.2E-13 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 PANTHER PTHR23135 1 425 5.0E-117 T 20-04-2016 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 SUPERFAMILY SSF53244 296 424 3.89E-30 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 Gene3D G3DSA:3.40.1190.10 72 293 1.2E-54 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 426 28.353 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 PANTHER PTHR23135:SF3 1 425 5.0E-117 T 20-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 SUPERFAMILY SSF63418 10 86 6.41E-18 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 Gene3D G3DSA:3.40.1390.10 12 59 7.9E-14 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 Pfam PF01225 Mur ligase family, catalytic domain 14 82 2.3E-6 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 SUPERFAMILY SSF53623 90 293 4.45E-42 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS06760 2227df7cf3b802eecd2cec9fd798bdae 426 Gene3D G3DSA:3.90.190.20 295 424 3.4E-35 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS01980 9ef2960abcdc4c907e90316649d3923c 469 SUPERFAMILY SSF48452 19 468 5.15E-83 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01980 9ef2960abcdc4c907e90316649d3923c 469 Gene3D G3DSA:1.25.40.10 214 410 6.3E-26 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01980 9ef2960abcdc4c907e90316649d3923c 469 Pfam PF07980 SusD family 318 468 1.0E-22 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS01980 9ef2960abcdc4c907e90316649d3923c 469 Pfam PF14322 Starch-binding associating with outer membrane 21 234 3.0E-31 T 20-04-2016 APS56_RS10095 e32c2b7e7fa0a396a51be2bbee0a66db 449 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 44 168 3.2E-15 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS10095 e32c2b7e7fa0a396a51be2bbee0a66db 449 PANTHER PTHR22604 1 430 1.2E-103 T 20-04-2016 APS56_RS10095 e32c2b7e7fa0a396a51be2bbee0a66db 449 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 23 4.4E-4 T 20-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APS56_RS10095 e32c2b7e7fa0a396a51be2bbee0a66db 449 Gene3D G3DSA:3.40.50.720 39 186 4.8E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10095 e32c2b7e7fa0a396a51be2bbee0a66db 449 PANTHER PTHR22604:SF122 1 430 1.2E-103 T 20-04-2016 APS56_RS10095 e32c2b7e7fa0a396a51be2bbee0a66db 449 Gene3D G3DSA:3.30.360.10 187 416 3.8E-18 T 20-04-2016 APS56_RS10095 e32c2b7e7fa0a396a51be2bbee0a66db 449 SUPERFAMILY SSF55347 178 350 1.83E-15 T 20-04-2016 APS56_RS10095 e32c2b7e7fa0a396a51be2bbee0a66db 449 SUPERFAMILY SSF51735 34 199 5.31E-35 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 Gene3D G3DSA:3.30.930.10 179 410 1.9E-135 T 20-04-2016 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 Gene3D G3DSA:3.30.930.10 10 93 1.9E-135 T 20-04-2016 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 SUPERFAMILY SSF55681 9 116 2.71E-109 T 20-04-2016 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 SUPERFAMILY SSF55681 145 416 2.71E-109 T 20-04-2016 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PANTHER PTHR10745 10 118 6.1E-167 T 20-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PANTHER PTHR10745 157 505 6.1E-167 T 20-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 SUPERFAMILY SSF52954 400 504 2.27E-33 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 210 386 4.1E-11 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PRINTS PR01043 Glycyl-tRNA synthetase signature 246 263 1.8E-45 T 20-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PRINTS PR01043 Glycyl-tRNA synthetase signature 193 205 1.8E-45 T 20-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PRINTS PR01043 Glycyl-tRNA synthetase signature 263 273 1.8E-45 T 20-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PRINTS PR01043 Glycyl-tRNA synthetase signature 27 41 1.8E-45 T 20-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PRINTS PR01043 Glycyl-tRNA synthetase signature 368 380 1.8E-45 T 20-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PRINTS PR01043 Glycyl-tRNA synthetase signature 450 469 1.8E-45 T 20-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PRINTS PR01043 Glycyl-tRNA synthetase signature 214 231 1.8E-45 T 20-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 9 292 4.4E-82 T 20-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PANTHER PTHR10745:SF7 10 118 6.1E-167 T 20-04-2016 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 PANTHER PTHR10745:SF7 157 505 6.1E-167 T 20-04-2016 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 5 505 45.851 T 20-04-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 Gene3D G3DSA:3.40.50.800 411 505 1.1E-37 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS12305 0e1aa1857db8e07b6afe05c4f9ecabe7 513 Pfam PF03129 Anticodon binding domain 413 502 2.2E-20 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 462 2.1E-190 T 20-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 Gene3D G3DSA:3.30.499.10 2 164 9.7E-25 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 Pfam PF00330 Aconitase family (aconitate hydratase) 7 455 1.3E-138 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 Gene3D G3DSA:3.30.499.10 327 464 2.6E-53 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PANTHER PTHR11670:SF12 325 469 1.4E-207 T 20-04-2016 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PANTHER PTHR11670:SF12 1 307 1.4E-207 T 20-04-2016 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 ProSitePatterns PS01244 Aconitase family signature 2. 397 410 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 Gene3D G3DSA:3.40.1060.10 166 280 2.9E-35 T 20-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PANTHER PTHR11670 325 469 1.4E-207 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PANTHER PTHR11670 1 307 1.4E-207 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 119 132 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 286 300 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 108 116 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 341 352 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 195 208 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 133 148 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 82 95 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 397 410 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 PRINTS PR00415 Aconitase family signature 209 222 3.4E-42 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03210 5b90a76b3939bbb48a83f3e8d360c93a 470 SUPERFAMILY SSF53732 1 463 3.92E-154 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PANTHER PTHR24322:SF625 116 156 3.6E-44 T 20-04-2016 APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PANTHER PTHR24322:SF625 7 95 3.6E-44 T 20-04-2016 APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PANTHER PTHR24322:SF625 172 204 3.6E-44 T 20-04-2016 APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 Gene3D G3DSA:3.40.50.720 2 270 9.7E-63 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 SUPERFAMILY SSF51735 3 271 1.16E-60 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 6.3E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 162 6.3E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 6.3E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 233 253 6.3E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.3E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 6.3E-26 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PANTHER PTHR24322 116 156 3.6E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PANTHER PTHR24322 7 95 3.6E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PANTHER PTHR24322 172 204 3.6E-44 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 Pfam PF00106 short chain dehydrogenase 3 213 4.5E-37 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.8E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 1.8E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 160 1.8E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14990 1868b0448230ccec96a358a11d1377a4 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 153 1.1E-10 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 Gene3D G3DSA:2.40.170.20 360 724 8.2E-64 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 Gene3D G3DSA:2.40.170.20 155 326 8.2E-64 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 Gene3D G3DSA:2.170.130.10 28 154 6.1E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 PANTHER PTHR32552 1 320 1.3E-97 T 20-04-2016 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 PANTHER PTHR32552 339 724 1.3E-97 T 20-04-2016 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 SUPERFAMILY SSF56935 34 724 1.32E-86 T 20-04-2016 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 PANTHER PTHR32552:SF38 1 320 1.3E-97 T 20-04-2016 APS56_RS11965 2b0cce9bb8fb0add87d6cb03d60c93c0 724 PANTHER PTHR32552:SF38 339 724 1.3E-97 T 20-04-2016 APS56_RS06670 b16f08912e75234b428f68b0eb00444a 282 Pfam PF00535 Glycosyl transferase family 2 5 141 8.3E-19 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS06670 b16f08912e75234b428f68b0eb00444a 282 PANTHER PTHR22916 1 282 6.9E-23 T 20-04-2016 APS56_RS06670 b16f08912e75234b428f68b0eb00444a 282 SUPERFAMILY SSF53448 2 249 3.78E-37 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS06670 b16f08912e75234b428f68b0eb00444a 282 Gene3D G3DSA:3.90.550.10 5 168 6.8E-26 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 SUPERFAMILY SSF51905 2 361 1.02E-68 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 20-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PANTHER PTHR22912:SF125 1 451 2.3E-199 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 447 3.9E-35 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 Gene3D G3DSA:3.30.390.30 326 457 2.7E-47 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PIRSF PIRSF000350 1 458 7.9E-79 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 133 142 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 257 271 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 4.0E-63 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PANTHER PTHR22912 1 451 2.3E-199 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 Gene3D G3DSA:3.50.50.60 2 132 1.2E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 SUPERFAMILY SSF55424 335 457 1.24E-38 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 Gene3D G3DSA:3.50.50.60 133 325 1.4E-53 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.3E-36 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 2.3E-36 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.3E-36 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 2.3E-36 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 272 2.3E-36 T 20-04-2016 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 457 4.7E-172 T 20-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APS56_RS03295 842a64759bb24a59e7b72a69deb0b458 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 319 1.1E-68 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 SUPERFAMILY SSF56235 16 437 3.01E-145 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 Gene3D G3DSA:3.60.20.10 16 445 1.4E-181 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 Gene3D G3DSA:3.20.20.70 844 1218 4.1E-182 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 Pfam PF01645 Conserved region in glutamate synthase 806 1175 3.9E-154 T 20-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 SUPERFAMILY SSF69336 1224 1488 2.22E-94 T 20-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 SUPERFAMILY SSF51395 449 1210 2.79E-258 T 20-04-2016 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 Pfam PF00310 Glutamine amidotransferases class-II 16 434 4.4E-177 T 20-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 Gene3D G3DSA:2.160.20.60 1230 1495 4.0E-99 T 20-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 Pfam PF04898 Glutamate synthase central domain 462 744 1.1E-102 T 20-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 Gene3D G3DSA:3.20.20.70 450 788 2.4E-91 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 PANTHER PTHR11938:SF1 5 1492 0.0 T 20-04-2016 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 PANTHER PTHR11938 5 1492 0.0 T 20-04-2016 APS56_RS09435 6901c5673e0386539ea055af50e4ee1c 1503 Pfam PF01493 GXGXG motif 1255 1440 8.4E-79 T 20-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 PIRSF PIRSF001435 1 204 4.0E-39 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 SMART SM00478 39 186 9.0E-49 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 Hamap MF_00942 Endonuclease III [nth]. 1 210 31.327 T 20-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 Gene3D G3DSA:1.10.1670.10 124 192 3.8E-22 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 PANTHER PTHR10359 7 191 1.7E-67 T 20-04-2016 APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 Gene3D G3DSA:1.10.340.30 25 123 3.3E-30 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 SUPERFAMILY SSF48150 1 191 7.54E-56 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 PANTHER PTHR10359:SF18 7 191 1.7E-67 T 20-04-2016 APS56_RS02295 1e557e08c55b300c6498a62fd7aff1e1 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 169 1.2E-19 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 SUPERFAMILY SSF52283 305 360 2.04E-61 T 20-04-2016 APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 SUPERFAMILY SSF52283 1 137 2.04E-61 T 20-04-2016 APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 Gene3D G3DSA:3.40.50.1770 1 170 9.9E-59 T 20-04-2016 APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 Gene3D G3DSA:3.40.50.720 171 303 2.5E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.9E-42 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 PIRSF PIRSF000183 1 362 5.7E-153 T 20-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 SUPERFAMILY SSF51735 137 303 1.28E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 PANTHER PTHR10160 1 361 7.5E-194 T 20-04-2016 APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 SMART SM01003 4 137 1.5E-66 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 20-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 358 3.3E-149 T 20-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 8.1E-82 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APS56_RS12265 39e7716781eaa2c462c2ead1be03f54d 363 SMART SM01002 149 297 6.2E-84 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APS56_RS12650 87c701dbcb139508ae93b82884d89f7b 280 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 44 260 1.2E-11 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS12650 87c701dbcb139508ae93b82884d89f7b 280 Gene3D G3DSA:3.40.50.1110 40 277 1.2E-62 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS12650 87c701dbcb139508ae93b82884d89f7b 280 PANTHER PTHR31321:SF29 177 270 1.4E-14 T 20-04-2016 APS56_RS12650 87c701dbcb139508ae93b82884d89f7b 280 PANTHER PTHR31321 177 270 1.4E-14 T 20-04-2016 APS56_RS12650 87c701dbcb139508ae93b82884d89f7b 280 SUPERFAMILY SSF52266 39 273 1.1E-41 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS03905 09ede62ce28977a4608e81a53e46682c 99 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 98 3.8E-12 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APS56_RS03905 09ede62ce28977a4608e81a53e46682c 99 SUPERFAMILY SSF69754 1 93 1.44E-17 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APS56_RS03905 09ede62ce28977a4608e81a53e46682c 99 Gene3D G3DSA:3.30.160.100 1 98 1.5E-17 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APS56_RS03905 09ede62ce28977a4608e81a53e46682c 99 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 94 4.2E-15 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 SUPERFAMILY SSF82693 57 138 5.23E-17 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Pfam PF00873 AcrB/AcrD/AcrF family 814 1093 6.2E-48 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Pfam PF00873 AcrB/AcrD/AcrF family 624 742 8.3E-13 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Pfam PF00873 AcrB/AcrD/AcrF family 38 529 5.5E-103 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Pfam PF00873 AcrB/AcrD/AcrF family 1113 1223 2.7E-25 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PANTHER PTHR32063 806 1089 0.0 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PANTHER PTHR32063 608 749 0.0 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PANTHER PTHR32063 1115 1232 0.0 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PANTHER PTHR32063 2 528 0.0 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 SUPERFAMILY SSF82866 310 522 4.19E-31 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Gene3D G3DSA:1.20.1640.10 321 529 1.3E-48 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 SUPERFAMILY SSF82866 971 1226 7.72E-36 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PANTHER PTHR32063:SF19 806 1089 0.0 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PANTHER PTHR32063:SF19 608 749 0.0 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PANTHER PTHR32063:SF19 1115 1232 0.0 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PANTHER PTHR32063:SF19 2 528 0.0 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 SUPERFAMILY SSF82693 288 335 1.75E-13 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 SUPERFAMILY SSF82693 166 202 1.75E-13 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 SUPERFAMILY SSF82714 888 973 1.03E-20 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Gene3D G3DSA:3.30.2090.10 887 976 8.4E-22 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Gene3D G3DSA:3.30.70.1430 58 154 7.9E-21 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Gene3D G3DSA:1.10.3850.10 979 1224 8.6E-49 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Gene3D G3DSA:3.30.2090.10 204 286 7.1E-15 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Gene3D G3DSA:3.30.70.1320 168 199 7.9E-8 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 Gene3D G3DSA:3.30.70.1320 290 320 7.9E-8 T 20-04-2016 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.8E-17 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PRINTS PR00702 Acriflavin resistance protein family signature 495 518 2.8E-17 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PRINTS PR00702 Acriflavin resistance protein family signature 414 438 2.8E-17 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PRINTS PR00702 Acriflavin resistance protein family signature 51 69 2.8E-17 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PRINTS PR00702 Acriflavin resistance protein family signature 386 407 2.8E-17 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 PRINTS PR00702 Acriflavin resistance protein family signature 359 382 2.8E-17 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01475 aa9e7128235ba11a8cdfab5073a475bb 1235 SUPERFAMILY SSF82714 204 285 1.83E-12 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS02280 966a6ef5f4d6b51c4898b835f1e9f519 253 Gene3D G3DSA:3.60.15.10 2 253 2.2E-67 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS02280 966a6ef5f4d6b51c4898b835f1e9f519 253 PANTHER PTHR12553 2 253 7.8E-58 T 20-04-2016 APS56_RS02280 966a6ef5f4d6b51c4898b835f1e9f519 253 Pfam PF12706 Beta-lactamase superfamily domain 48 224 7.0E-38 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS02280 966a6ef5f4d6b51c4898b835f1e9f519 253 PANTHER PTHR12553:SF7 2 253 7.8E-58 T 20-04-2016 APS56_RS02280 966a6ef5f4d6b51c4898b835f1e9f519 253 SUPERFAMILY SSF56281 2 253 8.65E-47 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 Gene3D G3DSA:3.30.2080.10 619 770 6.8E-45 T 20-04-2016 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 PANTHER PTHR12143:SF22 459 763 1.6E-109 T 20-04-2016 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 PANTHER PTHR12143:SF22 1 375 1.6E-109 T 20-04-2016 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 PANTHER PTHR12143:SF22 405 443 1.6E-109 T 20-04-2016 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 SUPERFAMILY SSF48208 261 756 8.84E-13 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 PANTHER PTHR12143 459 763 1.6E-109 T 20-04-2016 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 PANTHER PTHR12143 1 375 1.6E-109 T 20-04-2016 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 PANTHER PTHR12143 405 443 1.6E-109 T 20-04-2016 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 18 763 8.0E-138 T 20-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 Gene3D G3DSA:2.70.98.10 21 321 1.2E-82 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 Gene3D G3DSA:1.20.1050.60 357 444 9.8E-22 T 20-04-2016 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 Pfam PF07971 Glycosyl hydrolase family 92 239 758 1.0E-135 T 20-04-2016 IPR012939 Glycosyl hydrolase family 92 APS56_RS06050 f5bc36cf53bea55a61779248c22d1c55 780 Gene3D G3DSA:1.20.1610.10 459 618 1.3E-44 T 20-04-2016 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 PANTHER PTHR22573 1 456 5.3E-131 T 20-04-2016 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 SUPERFAMILY SSF53738 268 372 7.46E-22 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 100 109 - T 20-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 173 263 3.6E-25 T 20-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 270 372 2.1E-21 T 20-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 8 139 1.7E-29 T 20-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 182 201 1.4E-10 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 243 258 1.4E-10 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 99 113 1.4E-10 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 Gene3D G3DSA:3.40.120.10 6 156 1.3E-33 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 PANTHER PTHR22573:SF48 1 456 5.3E-131 T 20-04-2016 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 394 456 1.7E-11 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 TIGRFAM TIGR03990 Arch_GlmM: phosphoglucosamine mutase 4 455 8.7E-163 T 20-04-2016 IPR024086 Phosphoglucosamine mutase, archaeal type GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 Gene3D G3DSA:3.30.310.50 377 458 9.9E-22 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 Gene3D G3DSA:3.40.120.10 184 258 2.5E-24 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 SUPERFAMILY SSF55957 365 460 1.31E-23 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 SUPERFAMILY SSF53738 8 188 9.42E-32 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 SUPERFAMILY SSF53738 167 265 7.06E-24 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS01585 8fbe2e1760d8b99ab57bed3ec59301a8 462 Gene3D G3DSA:3.40.120.10 260 376 5.1E-29 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 SUPERFAMILY SSF56784 510 530 1.7E-54 T 20-04-2016 IPR023214 HAD-like domain APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 SUPERFAMILY SSF56784 570 820 1.7E-54 T 20-04-2016 IPR023214 HAD-like domain APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 Pfam PF00702 haloacid dehalogenase-like hydrolase 508 727 2.1E-38 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 SUPERFAMILY SSF81653 313 410 1.57E-26 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 220 823 1.7E-175 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 Pfam PF00403 Heavy-metal-associated domain 4 63 1.3E-7 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 Pfam PF00122 E1-E2 ATPase 282 503 3.6E-70 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 Gene3D G3DSA:3.30.70.100 1 68 1.3E-15 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 Gene3D G3DSA:2.70.150.10 250 411 3.6E-29 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PANTHER PTHR24093 1 824 1.1E-238 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 20-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 SUPERFAMILY SSF81665 277 314 4.32E-17 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 SUPERFAMILY SSF81665 762 812 4.32E-17 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 SUPERFAMILY SSF81665 411 506 4.32E-17 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 Gene3D G3DSA:3.40.50.1000 483 526 1.0E-50 T 20-04-2016 IPR023214 HAD-like domain APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 Gene3D G3DSA:3.40.50.1000 641 781 1.0E-50 T 20-04-2016 IPR023214 HAD-like domain APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 526 1.9E-25 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 713 732 1.9E-25 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 660 670 1.9E-25 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 360 374 1.9E-25 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 736 748 1.9E-25 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 282 807 1.9E-91 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PANTHER PTHR24093:SF50 1 824 1.1E-238 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 Gene3D G3DSA:3.40.1110.10 527 640 5.3E-16 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 238 822 5.7E-188 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00943 Copper-transporting ATPase signature 222 241 7.1E-14 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00943 Copper-transporting ATPase signature 433 447 7.1E-14 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00943 Copper-transporting ATPase signature 300 318 7.1E-14 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00943 Copper-transporting ATPase signature 690 707 7.1E-14 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00943 Copper-transporting ATPase signature 495 510 7.1E-14 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00943 Copper-transporting ATPase signature 280 299 7.1E-14 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 514 520 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 SUPERFAMILY SSF55008 1 69 5.89E-14 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00942 Copper-transporting ATPase 1 signature 200 220 1.4E-7 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00942 Copper-transporting ATPase 1 signature 220 245 1.4E-7 T 20-04-2016 APS56_RS08255 bbefd99cd101ac90daba178a90bb06d5 828 PRINTS PR00942 Copper-transporting ATPase 1 signature 2 27 1.4E-7 T 20-04-2016 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 Pfam PF02321 Outer membrane efflux protein 249 447 2.2E-29 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 Pfam PF02321 Outer membrane efflux protein 28 217 3.8E-32 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 SUPERFAMILY SSF56954 7 294 1.31E-87 T 20-04-2016 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 SUPERFAMILY SSF56954 325 453 1.31E-87 T 20-04-2016 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 PANTHER PTHR30026:SF4 8 302 3.5E-65 T 20-04-2016 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 PANTHER PTHR30026:SF4 321 452 3.5E-65 T 20-04-2016 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 PANTHER PTHR30026 8 302 3.5E-65 T 20-04-2016 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 PANTHER PTHR30026 321 452 3.5E-65 T 20-04-2016 APS56_RS13075 801fff4ff449815e11d096a6ceb82173 458 Gene3D G3DSA:1.20.1600.10 21 452 4.5E-86 T 20-04-2016 APS56_RS16095 baa4ab0dd9d3e61041e4fcdef8a27fa9 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 9 190 1.5E-37 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APS56_RS16095 baa4ab0dd9d3e61041e4fcdef8a27fa9 197 PANTHER PTHR11746 128 184 5.3E-13 T 20-04-2016 APS56_RS16095 baa4ab0dd9d3e61041e4fcdef8a27fa9 197 Hamap MF_00528 Septum formation protein Maf [maf]. 10 197 23.533 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APS56_RS16095 baa4ab0dd9d3e61041e4fcdef8a27fa9 197 Pfam PF02545 Maf-like protein 10 192 1.7E-49 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APS56_RS16095 baa4ab0dd9d3e61041e4fcdef8a27fa9 197 SUPERFAMILY SSF52972 7 192 1.44E-54 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APS56_RS16095 baa4ab0dd9d3e61041e4fcdef8a27fa9 197 PIRSF PIRSF006305 2 197 2.4E-50 T 20-04-2016 IPR003697 Maf-like protein GO:0005737 APS56_RS16095 baa4ab0dd9d3e61041e4fcdef8a27fa9 197 Gene3D G3DSA:3.90.950.10 9 195 1.6E-57 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 Pfam PF13637 Ankyrin repeats (many copies) 189 226 1.1E-5 T 20-04-2016 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SUPERFAMILY SSF48403 371 471 2.71E-12 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 Gene3D G3DSA:1.25.40.20 22 171 1.3E-24 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 PANTHER PTHR24198 414 470 2.5E-59 T 20-04-2016 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 PANTHER PTHR24198 175 340 2.5E-59 T 20-04-2016 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 PANTHER PTHR24198 23 140 2.5E-59 T 20-04-2016 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 Pfam PF12796 Ankyrin repeats (3 copies) 55 141 8.5E-11 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 Pfam PF12796 Ankyrin repeats (3 copies) 259 347 3.2E-12 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 285 314 0.0012 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 424 454 0.041 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 213 247 4600.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 180 209 45.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 391 420 2000.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 110 141 410.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 318 347 0.072 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 251 281 48.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 42 73 29.0 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SMART SM00248 77 106 3.9E-4 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 Gene3D G3DSA:1.25.40.20 172 470 2.7E-52 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS11570 499c4b2254ce3844cf5927adad5fb7cb 483 SUPERFAMILY SSF48403 22 353 3.07E-50 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 376 8.1E-6 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 6 443 1.8E-123 T 20-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 4 445 32.031 T 20-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 SUPERFAMILY SSF53244 306 445 9.61E-44 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 Pfam PF08245 Mur ligase middle domain 109 287 1.6E-31 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 SUPERFAMILY SSF53623 96 304 2.22E-45 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 PANTHER PTHR23135:SF2 1 445 9.7E-144 T 20-04-2016 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 Gene3D G3DSA:3.40.50.720 2 91 3.2E-13 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 Gene3D G3DSA:3.90.190.20 308 442 5.7E-47 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 PANTHER PTHR23135 1 445 9.7E-144 T 20-04-2016 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 Gene3D G3DSA:3.40.1190.10 93 306 1.8E-54 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08470 a12eb6f1aee4dac352627b4934cd27ec 445 SUPERFAMILY SSF51984 5 92 9.29E-14 T 20-04-2016 APS56_RS15840 eaadd6545aa396cfb7dfe38f7c5bf51f 179 SUPERFAMILY SSF52540 3 161 1.15E-16 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15840 eaadd6545aa396cfb7dfe38f7c5bf51f 179 Gene3D G3DSA:3.40.50.300 4 171 1.3E-26 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15840 eaadd6545aa396cfb7dfe38f7c5bf51f 179 Pfam PF13521 AAA domain 5 169 1.4E-39 T 20-04-2016 APS56_RS01775 f92b5a63f42d5b50212c90a0a819921e 182 SUPERFAMILY SSF53335 1 159 2.35E-37 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01775 f92b5a63f42d5b50212c90a0a819921e 182 PANTHER PTHR18895:SF60 16 152 2.7E-22 T 20-04-2016 APS56_RS01775 f92b5a63f42d5b50212c90a0a819921e 182 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APS56_RS01775 f92b5a63f42d5b50212c90a0a819921e 182 PIRSF PIRSF004553 1 180 1.6E-40 T 20-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS01775 f92b5a63f42d5b50212c90a0a819921e 182 PANTHER PTHR18895 16 152 2.7E-22 T 20-04-2016 APS56_RS01775 f92b5a63f42d5b50212c90a0a819921e 182 Gene3D G3DSA:3.40.50.150 1 178 4.5E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01775 f92b5a63f42d5b50212c90a0a819921e 182 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 178 1.3E-35 T 20-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS01775 f92b5a63f42d5b50212c90a0a819921e 182 Pfam PF03602 Conserved hypothetical protein 95 1 176 5.7E-36 T 20-04-2016 APS56_RS16130 461707ade973b529bc870368aa436c51 192 SUPERFAMILY SSF51206 12 134 5.24E-19 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS16130 461707ade973b529bc870368aa436c51 192 PANTHER PTHR24567 13 192 2.4E-14 T 20-04-2016 APS56_RS16130 461707ade973b529bc870368aa436c51 192 Pfam PF00027 Cyclic nucleotide-binding domain 29 116 2.2E-10 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS16130 461707ade973b529bc870368aa436c51 192 PANTHER PTHR24567:SF33 13 192 2.4E-14 T 20-04-2016 APS56_RS16130 461707ade973b529bc870368aa436c51 192 Gene3D G3DSA:2.60.120.10 5 154 6.7E-28 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 PANTHER PTHR10804 6 429 4.0E-103 T 20-04-2016 APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 Gene3D G3DSA:3.40.350.10 6 183 9.3E-40 T 20-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 PANTHER PTHR10804:SF17 6 429 4.0E-103 T 20-04-2016 APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 Pfam PF05195 Aminopeptidase P, N-terminal domain 11 132 4.9E-28 T 20-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 SUPERFAMILY SSF53092 6 179 6.8E-44 T 20-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 SUPERFAMILY SSF55920 180 429 1.2E-68 T 20-04-2016 IPR000994 Peptidase M24, structural domain APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 SMART SM01011 6 142 3.7E-33 T 20-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 Gene3D G3DSA:3.90.230.10 184 429 2.7E-74 T 20-04-2016 IPR000994 Peptidase M24, structural domain APS56_RS11755 62c7bd401f499382d30af27f7343bdca 430 Pfam PF00557 Metallopeptidase family M24 186 406 1.4E-56 T 20-04-2016 IPR000994 Peptidase M24, structural domain APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 22 387 8.8E-110 T 20-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 PANTHER PTHR11751:SF21 9 400 1.7E-94 T 20-04-2016 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 PANTHER PTHR11751 9 400 1.7E-94 T 20-04-2016 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 Pfam PF00155 Aminotransferase class I and II 68 370 4.2E-36 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 Gene3D G3DSA:3.90.1150.10 254 388 6.1E-30 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 Gene3D G3DSA:3.40.640.10 46 253 1.3E-45 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 160 184 8.7E-13 T 20-04-2016 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 196 219 8.7E-13 T 20-04-2016 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 111 132 8.7E-13 T 20-04-2016 APS56_RS01840 5cde62d934d0975ee3567b72d1e5e970 401 SUPERFAMILY SSF53383 23 388 2.2E-79 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 443 2.7E-19 T 20-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 Gene3D G3DSA:3.40.120.10 307 449 5.1E-31 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 1.5E-5 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 142 156 1.5E-5 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 1.5E-5 T 20-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 SUPERFAMILY SSF53738 223 313 1.02E-19 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 SUPERFAMILY SSF53738 302 449 2.35E-28 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 Gene3D G3DSA:3.40.120.10 228 306 1.5E-20 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 46 184 4.1E-40 T 20-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 220 310 2.8E-23 T 20-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 SUPERFAMILY SSF53738 34 232 2.04E-45 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 506 555 9.5E-8 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 PANTHER PTHR22573:SF54 22 571 1.7E-202 T 20-04-2016 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 143 152 - T 20-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 PANTHER PTHR22573 22 571 1.7E-202 T 20-04-2016 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 Gene3D G3DSA:3.30.310.50 475 563 1.0E-20 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 Gene3D G3DSA:3.40.120.10 31 211 8.0E-59 T 20-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 SUPERFAMILY SSF55957 442 476 3.14E-11 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS15200 18bfe9b5e00f7e4d627e213a5220e7f9 575 SUPERFAMILY SSF55957 508 562 3.14E-11 T 20-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 PANTHER PTHR30173 2 170 1.7E-42 T 20-04-2016 APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 160 2.7E-26 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 PANTHER PTHR30173:SF20 2 170 1.7E-42 T 20-04-2016 APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 Gene3D G3DSA:1.10.1740.10 4 89 7.3E-15 T 20-04-2016 APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 Gene3D G3DSA:1.10.10.10 99 162 1.8E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 6 160 1.8E-43 T 20-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 SUPERFAMILY SSF88659 97 161 9.16E-16 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 Pfam PF08281 Sigma-70, region 4 105 154 8.6E-17 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 Pfam PF04542 Sigma-70 region 2 10 77 2.0E-9 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14595 dd4fccdadb8e8fcb1f288d6dd561c527 173 SUPERFAMILY SSF88946 4 87 9.81E-17 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06475 555a408617d91c60d6a88b8447177e8f 408 PIRSF PIRSF016055 2 405 5.4E-145 T 20-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APS56_RS06475 555a408617d91c60d6a88b8447177e8f 408 PANTHER PTHR30578:SF1 1 405 1.1E-159 T 20-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APS56_RS06475 555a408617d91c60d6a88b8447177e8f 408 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 403 34.322 T 20-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APS56_RS06475 555a408617d91c60d6a88b8447177e8f 408 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 12 399 1.0E-136 T 20-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APS56_RS06475 555a408617d91c60d6a88b8447177e8f 408 Pfam PF03116 NQR2, RnfD, RnfE family 37 396 6.0E-107 T 20-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 APS56_RS06475 555a408617d91c60d6a88b8447177e8f 408 PANTHER PTHR30578 1 405 1.1E-159 T 20-04-2016 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 TIGRFAM TIGR03356 BGL: beta-galactosidase 18 448 1.8E-163 T 20-04-2016 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7089|MetaCyc: PWY-7091|MetaCyc: PWY-7092 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 PANTHER PTHR10353:SF36 15 454 1.9E-161 T 20-04-2016 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 21 35 - T 20-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 SUPERFAMILY SSF51445 16 454 1.87E-147 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 296 310 8.3E-19 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 381 392 8.3E-19 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 361 369 8.3E-19 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 426 438 8.3E-19 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 PRINTS PR00131 Glycosyl hydrolase family 1 signature 402 419 8.3E-19 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 361 369 - T 20-04-2016 IPR018120 Glycoside hydrolase family 1, active site APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 Pfam PF00232 Glycosyl hydrolase family 1 16 454 1.8E-146 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 PANTHER PTHR10353 15 454 1.9E-161 T 20-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 Pfam PF00295 Glycosyl hydrolases family 28 9 92 3.8E-5 T 20-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 APS56_RS11145 909cf8642a7000b519f685f66d479a12 457 Gene3D G3DSA:3.20.20.80 7 454 7.2E-148 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS00430 59ee91cbf98fa9f45f1529e3a5c200ef 338 ProSitePatterns PS00018 EF-hand calcium-binding domain. 148 160 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS00430 59ee91cbf98fa9f45f1529e3a5c200ef 338 Pfam PF04389 Peptidase family M28 111 323 4.8E-42 T 20-04-2016 IPR007484 Peptidase M28 APS56_RS00430 59ee91cbf98fa9f45f1529e3a5c200ef 338 SUPERFAMILY SSF53187 37 332 1.04E-64 T 20-04-2016 APS56_RS00430 59ee91cbf98fa9f45f1529e3a5c200ef 338 Gene3D G3DSA:3.40.630.10 35 332 1.0E-66 T 20-04-2016 APS56_RS00430 59ee91cbf98fa9f45f1529e3a5c200ef 338 PANTHER PTHR12147 68 333 1.4E-43 T 20-04-2016 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 PANTHER PTHR23076:SF10 3 645 0.0 T 20-04-2016 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 SMART SM00382 228 368 2.8E-24 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 640 34.59 T 20-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 Gene3D G3DSA:1.10.8.60 375 440 1.8E-26 T 20-04-2016 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 PANTHER PTHR23076 3 645 0.0 T 20-04-2016 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 365 2.9E-46 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 140 630 7.5E-216 T 20-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 ProSitePatterns PS00674 AAA-protein family signature. 336 354 - T 20-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 SUPERFAMILY SSF140990 447 638 7.32E-64 T 20-04-2016 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 SUPERFAMILY SSF52540 191 437 1.45E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 Pfam PF01434 Peptidase family M41 427 629 1.7E-72 T 20-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 APS56_RS14120 7a9b6b55d3f720776f4076eb5d1221da 648 Gene3D G3DSA:3.40.50.300 192 374 9.7E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 PANTHER PTHR11918:SF57 9 433 7.7E-176 T 20-04-2016 APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 Gene3D G3DSA:2.40.50.140 371 433 1.2E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 142 162 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 429 2.7E-151 T 20-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 430 3.1E-124 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 PANTHER PTHR11918 9 433 7.7E-176 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 SMART SM00729 138 356 7.2E-49 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 Pfam PF04055 Radical SAM superfamily 144 314 4.3E-25 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 432 63.113 T 20-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 SUPERFAMILY SSF102114 101 364 4.45E-57 T 20-04-2016 APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 Gene3D G3DSA:3.80.30.20 137 368 7.5E-74 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APS56_RS16575 76d1fc623b38dc8ed405a4fbac67d78c 434 Pfam PF00919 Uncharacterized protein family UPF0004 10 108 1.2E-25 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APS56_RS00690 634913422e94c72bd15827cccdba067d 316 Gene3D G3DSA:3.40.50.720 1 107 3.4E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00690 634913422e94c72bd15827cccdba067d 316 SUPERFAMILY SSF52283 1 121 8.69E-27 T 20-04-2016 APS56_RS00690 634913422e94c72bd15827cccdba067d 316 PANTHER PTHR10996 1 315 1.6E-96 T 20-04-2016 APS56_RS00690 634913422e94c72bd15827cccdba067d 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 315 5.5E-29 T 20-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APS56_RS00690 634913422e94c72bd15827cccdba067d 316 Gene3D G3DSA:3.40.50.720 108 296 3.1E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00690 634913422e94c72bd15827cccdba067d 316 SUPERFAMILY SSF51735 98 294 2.2E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00690 634913422e94c72bd15827cccdba067d 316 PANTHER PTHR10996:SF20 1 315 1.6E-96 T 20-04-2016 APS56_RS00690 634913422e94c72bd15827cccdba067d 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 293 1.4E-43 T 20-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APS56_RS00690 634913422e94c72bd15827cccdba067d 316 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 20-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 SMART SM00419 170 217 6.0E-9 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 191 206 1.3E-5 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 175 191 1.3E-5 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 Gene3D G3DSA:1.10.10.10 149 224 6.9E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 Pfam PF00027 Cyclic nucleotide-binding domain 34 119 2.8E-16 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 SUPERFAMILY SSF51206 7 147 6.55E-32 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 SMART SM00100 14 132 1.3E-11 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 Gene3D G3DSA:2.60.120.10 10 147 9.1E-32 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 SUPERFAMILY SSF46785 149 224 2.45E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 PANTHER PTHR24567 36 224 6.6E-43 T 20-04-2016 APS56_RS07845 59cb75662c4c5047fb3183ad062d7e8f 225 Pfam PF13545 Crp-like helix-turn-helix domain 152 223 6.3E-16 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 Pfam PF02080 TrkA-C domain 312 377 3.2E-9 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 537 553 - T 20-04-2016 IPR031312 Sodium/sulphate symporter, conserved site APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 SUPERFAMILY SSF116726 207 289 2.09E-9 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 PANTHER PTHR10283 350 589 3.2E-135 T 20-04-2016 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 PANTHER PTHR10283 5 225 3.2E-135 T 20-04-2016 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 Gene3D G3DSA:3.30.70.1450 214 290 4.3E-6 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 Gene3D G3DSA:3.30.70.1450 306 379 2.4E-15 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 Pfam PF03600 Citrate transporter 17 523 5.8E-51 T 20-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 PANTHER PTHR10283:SF100 350 589 3.2E-135 T 20-04-2016 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 PANTHER PTHR10283:SF100 5 225 3.2E-135 T 20-04-2016 APS56_RS09995 c340b756815403073e74dbba3f1a1012 590 SUPERFAMILY SSF116726 297 377 6.15E-14 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS11825 7d3bd6b0b1f0b0c608090bcc18e75a6f 250 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 1.2E-112 T 20-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 APS56_RS11825 7d3bd6b0b1f0b0c608090bcc18e75a6f 250 Pfam PF00005 ABC transporter 17 172 2.2E-23 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS11825 7d3bd6b0b1f0b0c608090bcc18e75a6f 250 PANTHER PTHR24220 3 249 5.8E-129 T 20-04-2016 APS56_RS11825 7d3bd6b0b1f0b0c608090bcc18e75a6f 250 Gene3D G3DSA:3.40.50.300 1 231 1.3E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11825 7d3bd6b0b1f0b0c608090bcc18e75a6f 250 PANTHER PTHR24220:SF85 3 249 5.8E-129 T 20-04-2016 APS56_RS11825 7d3bd6b0b1f0b0c608090bcc18e75a6f 250 SMART SM00382 26 223 2.1E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS11825 7d3bd6b0b1f0b0c608090bcc18e75a6f 250 SUPERFAMILY SSF52540 2 230 4.11E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15650 e89017e50d2c5f617b21202a1721a25d 519 Pfam PF13175 AAA ATPase domain 1 313 7.7E-15 T 20-04-2016 APS56_RS15650 e89017e50d2c5f617b21202a1721a25d 519 Gene3D G3DSA:3.40.50.300 1 324 1.8E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15650 e89017e50d2c5f617b21202a1721a25d 519 SUPERFAMILY SSF52540 170 327 2.17E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15650 e89017e50d2c5f617b21202a1721a25d 519 SUPERFAMILY SSF52540 1 138 2.17E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03465 2b3b1bd87964237ac8233bc9f00474b2 357 PIRSF PIRSF000267 1 357 1.0E-97 T 20-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APS56_RS03465 2b3b1bd87964237ac8233bc9f00474b2 357 PANTHER PTHR30365 177 352 5.4E-65 T 20-04-2016 APS56_RS03465 2b3b1bd87964237ac8233bc9f00474b2 357 PANTHER PTHR30365 1 142 5.4E-65 T 20-04-2016 APS56_RS03465 2b3b1bd87964237ac8233bc9f00474b2 357 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 3 235 1.2E-44 T 20-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APS56_RS03465 2b3b1bd87964237ac8233bc9f00474b2 357 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 1 341 1.3E-78 T 20-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APS56_RS03465 2b3b1bd87964237ac8233bc9f00474b2 357 PANTHER PTHR30365:SF6 177 352 5.4E-65 T 20-04-2016 APS56_RS03465 2b3b1bd87964237ac8233bc9f00474b2 357 PANTHER PTHR30365:SF6 1 142 5.4E-65 T 20-04-2016 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 PANTHER PTHR22939:SF78 221 445 7.0E-27 T 20-04-2016 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 PANTHER PTHR22939:SF78 72 101 7.0E-27 T 20-04-2016 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 SUPERFAMILY SSF50156 218 283 7.89E-9 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 PANTHER PTHR22939 221 445 7.0E-27 T 20-04-2016 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 PANTHER PTHR22939 72 101 7.0E-27 T 20-04-2016 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 Pfam PF02163 Peptidase family M50 10 431 4.0E-56 T 20-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 Gene3D G3DSA:2.30.42.10 220 285 1.5E-9 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 Gene3D G3DSA:2.30.42.10 100 197 4.4E-6 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 441 7.6E-57 T 20-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 APS56_RS10175 bf06355b06118f6a4e32661e51583d8c 446 SUPERFAMILY SSF50156 105 197 4.86E-7 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS04530 9d37e7bf1a639aa254fbd5f914430fac 287 Pfam PF00682 HMGL-like 11 265 2.6E-18 T 20-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APS56_RS04530 9d37e7bf1a639aa254fbd5f914430fac 287 Gene3D G3DSA:3.20.20.70 6 265 4.0E-40 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS04530 9d37e7bf1a639aa254fbd5f914430fac 287 PANTHER PTHR10277 1 256 1.2E-78 T 20-04-2016 APS56_RS04530 9d37e7bf1a639aa254fbd5f914430fac 287 SUPERFAMILY SSF51569 4 266 3.66E-41 T 20-04-2016 APS56_RS04530 9d37e7bf1a639aa254fbd5f914430fac 287 PANTHER PTHR10277:SF1 1 256 1.2E-78 T 20-04-2016 APS56_RS08535 a5ecf996acc96e21f3b4d129a9eb39f6 370 PANTHER PTHR30372 1 369 1.3E-97 T 20-04-2016 APS56_RS08535 a5ecf996acc96e21f3b4d129a9eb39f6 370 PANTHER PTHR30372:SF0 1 369 1.3E-97 T 20-04-2016 APS56_RS08535 a5ecf996acc96e21f3b4d129a9eb39f6 370 Pfam PF02684 Lipid-A-disaccharide synthetase 4 335 3.0E-81 T 20-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APS56_RS08535 a5ecf996acc96e21f3b4d129a9eb39f6 370 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 5 362 6.2E-71 T 20-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APS56_RS08535 a5ecf996acc96e21f3b4d129a9eb39f6 370 SUPERFAMILY SSF53756 1 366 5.34E-28 T 20-04-2016 APS56_RS01960 387bc7677864834ba4d4d3d1b4b15c24 495 Gene3D G3DSA:3.60.21.10 115 363 4.4E-29 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS01960 387bc7677864834ba4d4d3d1b4b15c24 495 SUPERFAMILY SSF56300 119 368 2.13E-32 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS01960 387bc7677864834ba4d4d3d1b4b15c24 495 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 315 481 8.5E-28 T 20-04-2016 IPR032288 Calcineurin-like phosphoesterase, C-terminal APS56_RS01960 387bc7677864834ba4d4d3d1b4b15c24 495 Pfam PF00149 Calcineurin-like phosphoesterase 119 298 6.0E-12 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS12820 451dea59bc12a24523f22b6bc1599988 529 Gene3D G3DSA:3.40.309.10 273 455 1.6E-43 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APS56_RS12820 451dea59bc12a24523f22b6bc1599988 529 Pfam PF00171 Aldehyde dehydrogenase family 16 459 1.3E-51 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APS56_RS12820 451dea59bc12a24523f22b6bc1599988 529 PANTHER PTHR11699:SF10 28 520 4.2E-131 T 20-04-2016 APS56_RS12820 451dea59bc12a24523f22b6bc1599988 529 Gene3D G3DSA:3.40.605.10 4 272 1.3E-46 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APS56_RS12820 451dea59bc12a24523f22b6bc1599988 529 PANTHER PTHR11699 28 520 4.2E-131 T 20-04-2016 APS56_RS12820 451dea59bc12a24523f22b6bc1599988 529 SUPERFAMILY SSF53720 18 516 3.67E-94 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 PANTHER PTHR30580 1 191 1.0E-224 T 20-04-2016 APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 PANTHER PTHR30580 210 815 1.0E-224 T 20-04-2016 APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 TIGRFAM TIGR00595 priA: primosomal protein N' 302 815 2.1E-174 T 20-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 SMART SM00487 276 476 7.4E-17 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 Pfam PF04851 Type III restriction enzyme, res subunit 278 444 4.7E-13 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 Gene3D G3DSA:3.40.50.300 275 466 5.6E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 SMART SM00490 580 677 3.1E-7 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 Pfam PF00271 Helicase conserved C-terminal domain 606 676 1.4E-6 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 Gene3D G3DSA:3.40.50.300 581 720 1.2E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 Gene3D G3DSA:3.40.50.300 491 516 1.2E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 Hamap MF_00983 Probable primosomal protein N' [priA]. 7 810 22.664 T 20-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 SUPERFAMILY SSF52540 295 446 2.18E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 SUPERFAMILY SSF52540 473 528 2.18E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03875 6916642ceb07995292d352490f6c11cb 817 SUPERFAMILY SSF52540 591 688 2.18E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 Pfam PF00593 TonB dependent receptor 662 897 4.9E-20 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 Gene3D G3DSA:2.40.170.20 386 421 6.0E-55 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 Gene3D G3DSA:2.40.170.20 237 354 6.0E-55 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 Gene3D G3DSA:2.40.170.20 480 938 6.0E-55 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 Gene3D G3DSA:2.60.40.1120 26 106 5.6E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 PANTHER PTHR30069 6 174 4.8E-12 T 20-04-2016 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 235 6.5E-7 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 PANTHER PTHR30069:SF11 6 174 4.8E-12 T 20-04-2016 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 Pfam PF13715 CarboxypepD_reg-like domain 26 111 5.1E-18 T 20-04-2016 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 SUPERFAMILY SSF49464 24 102 5.69E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 SUPERFAMILY SSF56935 564 624 1.17E-73 T 20-04-2016 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 SUPERFAMILY SSF56935 652 941 1.17E-73 T 20-04-2016 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 SUPERFAMILY SSF56935 479 537 1.17E-73 T 20-04-2016 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 SUPERFAMILY SSF56935 329 438 1.17E-73 T 20-04-2016 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 SUPERFAMILY SSF56935 98 297 1.17E-73 T 20-04-2016 APS56_RS03195 04b1a7ee1e4e1ba47e5c46a313b5d81c 941 Gene3D G3DSA:2.170.130.10 107 236 3.0E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Gene3D G3DSA:3.30.365.10 527 733 7.7E-38 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 596 682 4.8E-12 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 335 589 7.5E-35 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 52 179 3.0E-14 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 PANTHER PTHR11908:SF2 43 732 5.1E-120 T 20-04-2016 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Gene3D G3DSA:3.30.365.10 350 452 2.0E-27 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 SUPERFAMILY SSF56003 326 734 5.89E-97 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 PANTHER PTHR11908 43 732 5.1E-120 T 20-04-2016 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Gene3D G3DSA:3.30.365.10 314 349 1.3E-4 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Gene3D G3DSA:3.30.365.10 455 478 1.3E-4 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Gene3D G3DSA:3.90.1170.50 195 308 6.8E-19 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 SMART SM01008 211 310 8.8E-12 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 SUPERFAMILY SSF54665 212 307 1.73E-9 T 20-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 PIRSF PIRSF036389 1 735 7.0E-192 T 20-04-2016 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 SUPERFAMILY SSF56003 50 244 1.92E-35 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS00880 1794ad9ea4bc8d31abf898188c267a92 738 Gene3D G3DSA:3.30.365.10 51 194 2.3E-35 T 20-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 Gene3D G3DSA:3.30.2080.10 634 777 6.4E-41 T 20-04-2016 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 12 777 2.1E-116 T 20-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 Gene3D G3DSA:2.70.98.10 43 329 6.0E-67 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 Gene3D G3DSA:1.20.1050.60 364 447 5.3E-19 T 20-04-2016 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 PANTHER PTHR12143 13 387 2.2E-87 T 20-04-2016 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 PANTHER PTHR12143 413 777 2.2E-87 T 20-04-2016 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 Pfam PF07971 Glycosyl hydrolase family 92 250 772 1.5E-133 T 20-04-2016 IPR012939 Glycosyl hydrolase family 92 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 PANTHER PTHR12143:SF22 13 387 2.2E-87 T 20-04-2016 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 PANTHER PTHR12143:SF22 413 777 2.2E-87 T 20-04-2016 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 SUPERFAMILY SSF48208 272 769 2.44E-14 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS10075 ce248bbcdc7c6fe9b707d4a9df29d9c0 778 Gene3D G3DSA:1.20.1610.10 466 633 5.4E-52 T 20-04-2016 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 1.1E-6 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.1E-6 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 PANTHER PTHR11649:SF5 1 432 8.8E-129 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 PIRSF PIRSF006485 1 434 7.6E-161 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 Pfam PF01926 50S ribosome-binding GTPase 5 120 1.2E-28 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 Pfam PF01926 50S ribosome-binding GTPase 176 294 4.9E-23 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 178 335 2.9E-22 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 127 2.8E-23 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 2.2E-163 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 SUPERFAMILY SSF52540 2 177 8.43E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 Gene3D G3DSA:3.30.300.20 357 434 1.1E-30 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 Gene3D G3DSA:3.40.50.300 173 356 1.6E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 Gene3D G3DSA:3.40.50.300 4 172 1.0E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 Hamap MF_00195 GTPase Der [der]. 2 434 36.989 T 20-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 PANTHER PTHR11649 1 432 8.8E-129 T 20-04-2016 APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 SUPERFAMILY SSF52540 138 433 8.93E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13450 c217a464475b4a25a37a444eb15b947d 434 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 432 1.1E-27 T 20-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 30 114 7.0E-21 T 20-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 SUPERFAMILY SSF81296 22 129 1.68E-29 T 20-04-2016 IPR014756 Immunoglobulin E-set APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 PIRSF PIRSF000463 2 635 9.8E-270 T 20-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 SMART SM00642 166 502 1.2E-7 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 SUPERFAMILY SSF51445 79 524 2.94E-115 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 Gene3D G3DSA:3.20.20.80 152 520 2.1E-92 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 PANTHER PTHR10357 9 634 0.0 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 Gene3D G3DSA:2.60.40.10 18 129 6.7E-35 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 Gene3D G3DSA:2.60.40.1180 532 634 2.8E-34 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 6 635 42.696 T 20-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 14 631 1.2E-266 T 20-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 536 634 1.3E-21 T 20-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 Pfam PF00128 Alpha amylase, catalytic domain 183 261 5.1E-10 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 Pfam PF00128 Alpha amylase, catalytic domain 276 488 1.6E-5 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 PANTHER PTHR10357:SF160 9 634 0.0 T 20-04-2016 APS56_RS11090 74c3a391e43354cabbd56e2dcd237635 635 SUPERFAMILY SSF51011 532 634 5.99E-30 T 20-04-2016 APS56_RS03710 efada37d5983e580880a8648994e28f5 132 Pfam PF11009 Protein of unknown function (DUF2847) 28 127 1.3E-33 T 20-04-2016 IPR022551 Protein of unknown function DUF2847 APS56_RS03710 efada37d5983e580880a8648994e28f5 132 SUPERFAMILY SSF52833 44 131 1.3E-5 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS03710 efada37d5983e580880a8648994e28f5 132 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 28 128 2.4E-36 T 20-04-2016 IPR022551 Protein of unknown function DUF2847 APS56_RS03710 efada37d5983e580880a8648994e28f5 132 Gene3D G3DSA:3.40.30.10 42 132 2.7E-4 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.13E-12 T 20-04-2016 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 3.13E-12 T 20-04-2016 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 272 3.13E-12 T 20-04-2016 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 Gene3D G3DSA:3.50.50.60 130 227 3.8E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PANTHER PTHR22912 1 295 2.7E-77 T 20-04-2016 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 SUPERFAMILY SSF51905 1 297 5.49E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 2.88E-8 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 2.88E-8 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 2.88E-8 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 2.88E-8 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 285 7.3E-29 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 Gene3D G3DSA:3.50.50.60 5 129 5.2E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 Gene3D G3DSA:3.50.50.60 249 299 5.2E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07105 b274e8fedf45127c93444154c67718c1 301 PANTHER PTHR22912:SF159 1 295 2.7E-77 T 20-04-2016 APS56_RS04420 9588dbe3354bdbdf8eda1ffcfb80ef23 457 Gene3D G3DSA:3.90.1150.10 351 455 6.9E-27 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS04420 9588dbe3354bdbdf8eda1ffcfb80ef23 457 Gene3D G3DSA:3.40.640.10 84 350 3.8E-78 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS04420 9588dbe3354bdbdf8eda1ffcfb80ef23 457 SUPERFAMILY SSF53383 33 456 3.85E-102 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS04420 9588dbe3354bdbdf8eda1ffcfb80ef23 457 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 280 301 - T 20-04-2016 IPR021115 Pyridoxal-phosphate binding site GO:0016831 APS56_RS04420 9588dbe3354bdbdf8eda1ffcfb80ef23 457 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 73 396 7.8E-59 T 20-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 APS56_RS04420 9588dbe3354bdbdf8eda1ffcfb80ef23 457 PANTHER PTHR11999 7 454 5.1E-80 T 20-04-2016 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 PANTHER PTHR24423 185 408 1.4E-73 T 20-04-2016 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 PANTHER PTHR24423 6 138 1.4E-73 T 20-04-2016 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 SMART SM00387 302 412 1.3E-26 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 SMART SM00388 189 257 3.1E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 Gene3D G3DSA:1.10.287.130 180 242 1.3E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 SUPERFAMILY SSF47384 178 258 3.73E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 303 410 1.9E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 Pfam PF00512 His Kinase A (phospho-acceptor) domain 190 257 4.7E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 SUPERFAMILY SSF55785 18 132 4.35E-23 T 20-04-2016 IPR000014 PAS domain APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 Gene3D G3DSA:3.30.450.20 7 121 1.1E-21 T 20-04-2016 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 Pfam PF13426 PAS domain 18 121 5.9E-13 T 20-04-2016 IPR000014 PAS domain APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 Gene3D G3DSA:3.30.565.10 243 410 1.0E-38 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 409 3.22E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 367 3.22E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 353 3.22E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 390 3.22E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 SMART SM00091 7 73 8.6E-9 T 20-04-2016 IPR000014 PAS domain APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 130 7.0E-20 T 20-04-2016 IPR000014 PAS domain APS56_RS07860 98fa10b530204f0c1f0a7a2f50b9f9a3 415 SUPERFAMILY SSF55874 246 409 1.3E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 509 603 2.6E-11 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 Pfam PF13426 PAS domain 272 367 3.2E-6 T 20-04-2016 IPR000014 PAS domain APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 Pfam PF07730 Histidine kinase 404 468 2.8E-8 T 20-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 42 142 2.3E-15 T 20-04-2016 IPR029095 NarX-like, N-terminal APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 SMART SM00387 507 605 5.5E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 Gene3D G3DSA:3.30.450.20 269 371 8.2E-6 T 20-04-2016 APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 SUPERFAMILY SSF55874 477 602 3.27E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 PANTHER PTHR24421:SF18 367 604 2.2E-40 T 20-04-2016 APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 4.1E-5 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 557 4.1E-5 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 602 4.1E-5 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 Gene3D G3DSA:3.30.565.10 492 606 3.8E-14 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 271 374 2.7E-6 T 20-04-2016 IPR000014 PAS domain APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 PANTHER PTHR24421 367 604 2.2E-40 T 20-04-2016 APS56_RS00915 dfedf4cc3ff6c68b9b1ab8aef6e881f7 612 SUPERFAMILY SSF55785 272 377 4.36E-9 T 20-04-2016 IPR000014 PAS domain APS56_RS02865 86eee3c0de268c691a27f35ea79e2e8c 286 PANTHER PTHR12862 1 158 4.4E-12 T 20-04-2016 APS56_RS02865 86eee3c0de268c691a27f35ea79e2e8c 286 SUPERFAMILY SSF53067 112 284 1.1E-41 T 20-04-2016 APS56_RS02865 86eee3c0de268c691a27f35ea79e2e8c 286 SUPERFAMILY SSF53067 1 106 1.68E-31 T 20-04-2016 APS56_RS05710 76da6575670dc036e398b152dd7c6f26 231 Pfam PF13847 Methyltransferase domain 59 164 8.9E-9 T 20-04-2016 IPR025714 Methyltransferase domain APS56_RS05710 76da6575670dc036e398b152dd7c6f26 231 SUPERFAMILY SSF53335 48 223 4.07E-20 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS05710 76da6575670dc036e398b152dd7c6f26 231 Gene3D G3DSA:3.40.50.150 51 216 6.3E-19 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 PANTHER PTHR30031:SF0 1 533 7.1E-276 T 20-04-2016 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 SUPERFAMILY SSF68923 10 214 1.62E-74 T 20-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 PANTHER PTHR30031 1 533 7.1E-276 T 20-04-2016 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 Gene3D G3DSA:3.90.228.20 217 280 7.2E-119 T 20-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 Gene3D G3DSA:3.90.228.20 340 530 7.2E-119 T 20-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 9 531 4.9E-209 T 20-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 485 1.4E-211 T 20-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 16 532 51.569 T 20-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 PIRSF PIRSF006294 3 532 5.8E-218 T 20-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 SUPERFAMILY SSF53795 217 532 2.2E-130 T 20-04-2016 APS56_RS03140 cf175c773764e1822c7f01c19975748a 542 Gene3D G3DSA:3.40.449.10 21 214 1.4E-70 T 20-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APS56_RS06690 3964b0b1b53e2f531a760a6f3e4edff4 255 PANTHER PTHR24220:SF567 3 237 5.7E-104 T 20-04-2016 APS56_RS06690 3964b0b1b53e2f531a760a6f3e4edff4 255 Gene3D G3DSA:3.40.50.300 1 235 1.6E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06690 3964b0b1b53e2f531a760a6f3e4edff4 255 Pfam PF00005 ABC transporter 17 165 3.6E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS06690 3964b0b1b53e2f531a760a6f3e4edff4 255 SUPERFAMILY SSF52540 1 234 4.94E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06690 3964b0b1b53e2f531a760a6f3e4edff4 255 PANTHER PTHR24220 3 237 5.7E-104 T 20-04-2016 APS56_RS06690 3964b0b1b53e2f531a760a6f3e4edff4 255 SMART SM00382 26 215 2.6E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 SUPERFAMILY SSF49464 48 103 4.97E-6 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 45 1029 1.0E-179 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 SUPERFAMILY SSF56935 948 1029 3.41E-58 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 SUPERFAMILY SSF56935 462 801 3.41E-58 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 SUPERFAMILY SSF56935 136 267 3.41E-58 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 SUPERFAMILY SSF56935 867 911 3.41E-58 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 SUPERFAMILY SSF56935 326 417 3.41E-58 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 PANTHER PTHR11532:SF57 554 1027 4.0E-164 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 PANTHER PTHR11532:SF57 1 467 4.0E-164 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 Gene3D G3DSA:2.170.130.10 138 251 1.6E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 243 6.3E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 Gene3D G3DSA:2.60.40.1120 46 110 7.2E-5 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 PANTHER PTHR11532 554 1027 4.0E-164 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 PANTHER PTHR11532 1 467 4.0E-164 T 20-04-2016 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 Pfam PF00593 TonB dependent receptor 646 1027 1.9E-17 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 219 249 1.2E-14 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 Gene3D G3DSA:2.40.170.20 335 801 2.9E-12 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15560 0270bd0407caeb7c0cd01839b5a7dc93 1029 Gene3D G3DSA:2.40.170.20 861 921 2.9E-12 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 PANTHER PTHR31339 28 442 6.8E-74 T 20-04-2016 APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 Gene3D G3DSA:2.160.20.10 11 504 9.4E-91 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 Pfam PF00295 Glycosyl hydrolases family 28 106 373 1.7E-25 T 20-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 PANTHER PTHR31339:SF0 28 442 6.8E-74 T 20-04-2016 APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 SMART SM00710 265 288 1200.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 SMART SM00710 211 232 430.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 SMART SM00710 334 360 4500.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 SMART SM00710 238 259 1100.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 SMART SM00710 185 210 85.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12675 6d40cb78cc608d9d7449e887a6ec2d1e 658 SUPERFAMILY SSF51126 9 379 1.14E-74 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 PANTHER PTHR32282:SF11 15 335 4.2E-178 T 20-04-2016 APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 PANTHER PTHR32282:SF11 425 735 4.2E-178 T 20-04-2016 APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 SUPERFAMILY SSF56601 426 747 1.88E-115 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 SUPERFAMILY SSF56601 226 248 1.88E-115 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 SUPERFAMILY SSF56601 282 338 1.88E-115 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 Gene3D G3DSA:3.40.710.10 424 749 1.3E-121 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 Gene3D G3DSA:3.40.710.10 247 338 1.3E-121 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 SUPERFAMILY SSF53955 56 271 6.19E-60 T 20-04-2016 IPR023346 Lysozyme-like domain APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 Pfam PF00912 Transglycosylase 68 244 3.0E-50 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 Gene3D G3DSA:1.10.3810.10 75 246 5.7E-57 T 20-04-2016 APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 Pfam PF00905 Penicillin binding protein transpeptidase domain 434 692 1.7E-26 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 PANTHER PTHR32282 15 335 4.2E-178 T 20-04-2016 APS56_RS10540 7716f9a4a5991077b3eb4370076b4797 778 PANTHER PTHR32282 425 735 4.2E-178 T 20-04-2016 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 PANTHER PTHR21098 1 194 2.1E-82 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 PIRSF PIRSF000498 1 196 1.1E-65 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 SUPERFAMILY SSF63380 1 91 1.7E-24 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 Gene3D G3DSA:2.40.30.20 103 192 2.4E-27 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 Pfam PF00677 Lumazine binding domain 98 182 3.3E-20 T 20-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 Pfam PF00677 Lumazine binding domain 3 85 3.3E-20 T 20-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 Gene3D G3DSA:2.40.30.20 5 102 5.1E-32 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 2.2E-58 T 20-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS11165 3a5929ce36180cf1f096d35493208ac4 196 SUPERFAMILY SSF63380 91 193 2.81E-30 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APS56_RS06195 dd854ff3c79e618a5dd2e3e1d20ada43 203 PANTHER PTHR30576:SF8 1 189 1.4E-68 T 20-04-2016 APS56_RS06195 dd854ff3c79e618a5dd2e3e1d20ada43 203 PANTHER PTHR30576 1 189 1.4E-68 T 20-04-2016 APS56_RS06195 dd854ff3c79e618a5dd2e3e1d20ada43 203 Pfam PF02397 Bacterial sugar transferase 7 181 1.3E-53 T 20-04-2016 IPR003362 Bacterial sugar transferase APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 ProSitePatterns PS00523 Sulfatases signature 1. 73 85 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 PANTHER PTHR10342 154 516 1.7E-137 T 20-04-2016 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 PANTHER PTHR10342 4 134 1.7E-137 T 20-04-2016 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 SUPERFAMILY SSF53649 164 489 6.28E-113 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 SUPERFAMILY SSF53649 25 137 6.28E-113 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 Pfam PF00884 Sulfatase 26 380 5.9E-63 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 Gene3D G3DSA:3.40.720.10 24 418 9.4E-104 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 PANTHER PTHR10342:SF199 154 516 1.7E-137 T 20-04-2016 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 PANTHER PTHR10342:SF199 4 134 1.7E-137 T 20-04-2016 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 Gene3D G3DSA:3.30.1120.10 419 489 6.4E-17 T 20-04-2016 APS56_RS09780 735227e58c4ed61168240000f0d7a0d3 516 Pfam PF16385 Domain of unknown function 384 485 1.9E-12 T 20-04-2016 IPR032158 Domain of unknown function DUF4994 APS56_RS02355 8d228234277e7433ccefdac48e21949b 151 SUPERFAMILY SSF55729 1 144 1.21E-21 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS02355 8d228234277e7433ccefdac48e21949b 151 PANTHER PTHR23091 1 140 1.8E-13 T 20-04-2016 APS56_RS02355 8d228234277e7433ccefdac48e21949b 151 Pfam PF13673 Acetyltransferase (GNAT) domain 78 142 5.8E-9 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS02355 8d228234277e7433ccefdac48e21949b 151 Gene3D G3DSA:3.40.630.30 1 150 2.1E-34 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 Pfam PF16193 AAA C-terminal domain 184 252 3.5E-22 T 20-04-2016 IPR032423 AAA ATPase, C-terminal domain APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 Gene3D G3DSA:1.10.8.60 145 215 1.2E-7 T 20-04-2016 APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 Gene3D G3DSA:1.20.272.10 234 332 2.4E-45 T 20-04-2016 APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 150 8.5E-18 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 SUPERFAMILY SSF52540 3 222 1.19E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 Pfam PF12002 MgsA AAA+ ATPase C terminal 253 417 7.5E-68 T 20-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 Gene3D G3DSA:1.10.3710.10 333 422 6.6E-28 T 20-04-2016 APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 Gene3D G3DSA:3.40.50.300 2 144 1.5E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 SMART SM00382 38 156 1.6E-16 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 SUPERFAMILY SSF48019 238 422 7.94E-74 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 PANTHER PTHR13779 2 422 2.5E-193 T 20-04-2016 APS56_RS13890 7901e072bf8bb9cbb6e4230740244162 425 PANTHER PTHR13779:SF7 2 422 2.5E-193 T 20-04-2016 APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 PANTHER PTHR30146:SF30 1 334 3.9E-77 T 20-04-2016 APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 Gene3D G3DSA:1.10.260.40 2 53 1.3E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 SUPERFAMILY SSF47413 1 59 1.99E-14 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.3E-10 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 59 316 8.9E-21 T 20-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 Gene3D G3DSA:3.40.50.2300 54 176 3.5E-40 T 20-04-2016 APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 Gene3D G3DSA:3.40.50.2300 177 310 2.4E-24 T 20-04-2016 APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 SUPERFAMILY SSF53822 58 314 3.85E-48 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 PANTHER PTHR30146 1 334 3.9E-77 T 20-04-2016 APS56_RS12745 9e6b71ac64de0dd8f938ea0c1f423218 335 SMART SM00354 1 71 2.2E-23 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 SUPERFAMILY SSF52540 12 245 5.78E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 SMART SM00382 357 535 1.1E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 SMART SM00382 35 245 3.6E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 PANTHER PTHR19211:SF7 1 563 0.0 T 20-04-2016 APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 Gene3D G3DSA:3.40.50.300 331 544 3.3E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 Pfam PF00005 ABC transporter 26 200 3.5E-26 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 Pfam PF00005 ABC transporter 349 482 3.5E-22 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 6 561 3.2E-274 T 20-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 Gene3D G3DSA:3.40.50.300 11 113 1.7E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 Gene3D G3DSA:3.40.50.300 146 297 1.7E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 SUPERFAMILY SSF52540 315 531 1.02E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 Pfam PF12848 ABC transporter 239 312 8.6E-12 T 20-04-2016 IPR032781 ABC-transporter extension domain APS56_RS03165 273281f072d9416a6ff68f821f16c567 563 PANTHER PTHR19211 1 563 0.0 T 20-04-2016 APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 PANTHER PTHR11732 1 138 5.4E-135 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 PANTHER PTHR11732 157 345 5.4E-135 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 Pfam PF00248 Aldo/keto reductase family 15 337 1.0E-61 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 SUPERFAMILY SSF51430 1 340 1.83E-90 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 Gene3D G3DSA:3.20.20.100 1 340 1.4E-90 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 1.5E-8 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 PRINTS PR00069 Aldo-keto reductase signature 115 133 1.5E-8 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 PANTHER PTHR11732:SF112 1 138 5.4E-135 T 20-04-2016 APS56_RS11710 fb611e79fb37c41490828daf24ef810b 346 PANTHER PTHR11732:SF112 157 345 5.4E-135 T 20-04-2016 APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 Gene3D G3DSA:1.10.10.10 100 159 3.4E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 Gene3D G3DSA:1.10.1740.10 3 93 1.9E-11 T 20-04-2016 APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 PANTHER PTHR30173:SF20 5 165 5.2E-34 T 20-04-2016 APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 SUPERFAMILY SSF88659 91 158 5.45E-14 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 PANTHER PTHR30173 5 165 5.2E-34 T 20-04-2016 APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 155 6.4E-23 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 Pfam PF08281 Sigma-70, region 4 101 153 2.4E-14 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 Pfam PF04542 Sigma-70 region 2 10 73 5.3E-8 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 4 157 1.5E-37 T 20-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type APS56_RS15710 17c208283c1e58feb771ac6cfcafab1a 181 SUPERFAMILY SSF88946 3 85 4.71E-12 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS02995 310cf3ed9829df5e6c52a3e33c7fa8e5 778 SUPERFAMILY SSF48208 272 758 8.84E-94 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS02995 310cf3ed9829df5e6c52a3e33c7fa8e5 778 PIRSF PIRSF007663 21 777 6.8E-275 T 20-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 APS56_RS02995 310cf3ed9829df5e6c52a3e33c7fa8e5 778 PANTHER PTHR31084 32 776 5.2E-298 T 20-04-2016 APS56_RS02995 310cf3ed9829df5e6c52a3e33c7fa8e5 778 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 39 267 1.7E-68 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS02995 310cf3ed9829df5e6c52a3e33c7fa8e5 778 PANTHER PTHR31084:SF0 32 776 5.2E-298 T 20-04-2016 APS56_RS02995 310cf3ed9829df5e6c52a3e33c7fa8e5 778 Gene3D G3DSA:2.70.98.50 38 405 1.8E-130 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS04470 323dd83eef938b4e84321a0a7ad19ccb 340 Gene3D G3DSA:3.30.530.20 31 173 2.2E-7 T 20-04-2016 IPR023393 START-like domain APS56_RS04470 323dd83eef938b4e84321a0a7ad19ccb 340 Pfam PF06445 GyrI-like small molecule binding domain 243 338 4.3E-6 T 20-04-2016 IPR029442 GyrI-like small molecule binding domain APS56_RS04470 323dd83eef938b4e84321a0a7ad19ccb 340 SUPERFAMILY SSF55961 23 150 1.02E-15 T 20-04-2016 APS56_RS04470 323dd83eef938b4e84321a0a7ad19ccb 340 SUPERFAMILY SSF55136 210 339 2.62E-13 T 20-04-2016 IPR011256 Regulatory factor, effector binding domain APS56_RS04470 323dd83eef938b4e84321a0a7ad19ccb 340 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 30 172 2.3E-10 T 20-04-2016 IPR019587 Polyketide cyclase/dehydrase APS56_RS04470 323dd83eef938b4e84321a0a7ad19ccb 340 SMART SM00871 186 339 3.7E-7 T 20-04-2016 IPR010499 Bacterial transcription activator, effector binding APS56_RS04470 323dd83eef938b4e84321a0a7ad19ccb 340 Gene3D G3DSA:3.20.80.10 210 339 4.9E-11 T 20-04-2016 IPR011256 Regulatory factor, effector binding domain APS56_RS06080 10405485899ced3b2229d9f1c7bc40d4 932 SUPERFAMILY SSF48230 165 404 3.02E-20 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS06080 10405485899ced3b2229d9f1c7bc40d4 932 Pfam PF07940 Heparinase II/III-like protein 489 624 9.8E-8 T 20-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 Gene3D G3DSA:2.60.40.1180 383 454 5.8E-6 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 Gene3D G3DSA:3.20.20.80 29 369 1.5E-110 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 PRINTS PR00741 Glycosyl hydrolase family 29 signature 352 374 4.9E-19 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 PRINTS PR00741 Glycosyl hydrolase family 29 signature 319 340 4.9E-19 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 PRINTS PR00741 Glycosyl hydrolase family 29 signature 114 130 4.9E-19 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 SMART SM00812 32 409 5.5E-131 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 SUPERFAMILY SSF51445 32 369 1.35E-107 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 Pfam PF01120 Alpha-L-fucosidase 27 366 3.0E-105 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 PIRSF PIRSF001092 1 455 4.8E-133 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 PANTHER PTHR10030 197 444 4.6E-93 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS06070 c5c071fd19800c68b088720062ad9c25 457 PANTHER PTHR10030 38 181 4.6E-93 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 31 337 5.4E-85 T 20-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 Pfam PF00849 RNA pseudouridylate synthase 107 264 4.4E-35 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 SUPERFAMILY SSF55120 94 339 3.7E-71 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 SMART SM00363 32 91 2.5E-4 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 151 165 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 PANTHER PTHR11079 11 348 5.8E-140 T 20-04-2016 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 Gene3D G3DSA:3.10.290.10 31 80 1.4E-10 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 SUPERFAMILY SSF55174 31 119 7.3E-9 T 20-04-2016 APS56_RS14850 cb5d8da3c2b292ac87cb7980a39a304d 348 PANTHER PTHR11079:SF73 11 348 5.8E-140 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 Pfam PF13541 Subunit ChlI of Mg-chelatase 327 427 3.1E-10 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 Gene3D G3DSA:3.40.50.300 62 274 2.5E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PANTHER PTHR32472:SF10 1 452 1.6E-186 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 Pfam PF13481 AAA domain 82 219 2.6E-12 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PRINTS PR01874 DNA repair protein radA signature 82 110 5.6E-87 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PRINTS PR01874 DNA repair protein radA signature 10 34 5.6E-87 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PRINTS PR01874 DNA repair protein radA signature 171 195 5.6E-87 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PRINTS PR01874 DNA repair protein radA signature 245 271 5.6E-87 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PRINTS PR01874 DNA repair protein radA signature 319 342 5.6E-87 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PRINTS PR01874 DNA repair protein radA signature 121 138 5.6E-87 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PRINTS PR01874 DNA repair protein radA signature 210 238 5.6E-87 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 SUPERFAMILY SSF52540 71 284 1.93E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 SMART SM00382 90 241 8.4E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 PANTHER PTHR32472 1 452 1.6E-186 T 20-04-2016 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 Gene3D G3DSA:3.30.230.10 282 451 2.1E-32 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 447 2.0E-175 T 20-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 SUPERFAMILY SSF54211 252 266 5.69E-33 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS12075 6f1f0a42ed8ad9f10c35870eee1e4c91 452 SUPERFAMILY SSF54211 300 451 5.69E-33 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 Pfam PF00512 His Kinase A (phospho-acceptor) domain 322 387 1.7E-17 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 Gene3D G3DSA:1.10.287.130 318 372 1.8E-17 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 Gene3D G3DSA:3.40.50.2300 568 685 1.9E-25 T 20-04-2016 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 SUPERFAMILY SSF55874 376 548 5.91E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 SMART SM00448 568 680 1.3E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 SUPERFAMILY SSF52172 568 685 1.14E-24 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 SMART SM00388 322 387 3.3E-22 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 PANTHER PTHR24423 301 722 2.5E-100 T 20-04-2016 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 Pfam PF00072 Response regulator receiver domain 571 679 2.3E-20 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 SMART SM00387 434 549 9.2E-30 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 435 546 3.0E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 SUPERFAMILY SSF47384 309 388 2.35E-19 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 1.2E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 1.2E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 546 1.2E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 527 1.2E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10990 a63d3f3502fab61d4a60f224e0318742 808 Gene3D G3DSA:3.30.565.10 373 549 5.8E-39 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SUPERFAMILY SSF52172 1083 1211 1.57E-30 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Gene3D G3DSA:1.10.10.60 1227 1283 4.4E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SMART SM00342 1247 1330 2.0E-22 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SMART SM00387 926 1039 2.9E-26 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Pfam PF12833 Helix-turn-helix domain 1255 1331 9.5E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 PANTHER PTHR24423 200 641 2.3E-118 T 20-04-2016 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 PANTHER PTHR24423 701 1239 2.3E-118 T 20-04-2016 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1023 1036 4.5E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 999 1017 4.5E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 986 996 4.5E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 PRINTS PR00344 Bacterial sensor protein C-terminal signature 968 982 4.5E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Pfam PF07495 Y_Y_Y domain 696 759 3.4E-20 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SMART SM00388 814 880 3.5E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Gene3D G3DSA:1.10.287.130 813 866 2.2E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SUPERFAMILY SSF55874 869 1035 1.31E-34 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 934 1037 1.8E-18 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Gene3D G3DSA:1.10.10.60 1284 1331 3.2E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Pfam PF07494 Two component regulator propeller 300 322 0.0065 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Pfam PF07494 Two component regulator propeller 346 368 1.6E-5 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Pfam PF07494 Two component regulator propeller 37 59 5.3E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Pfam PF00512 His Kinase A (phospho-acceptor) domain 815 879 9.2E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Gene3D G3DSA:2.120.10.30 488 595 9.3E-8 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Gene3D G3DSA:2.120.10.30 178 396 3.2E-12 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Pfam PF00072 Response regulator receiver domain 1087 1194 1.3E-19 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SMART SM00448 1085 1197 3.2E-31 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SUPERFAMILY SSF50998 166 226 2.28E-14 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SUPERFAMILY SSF50998 489 559 2.28E-14 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SUPERFAMILY SSF50998 299 438 2.28E-14 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SUPERFAMILY SSF50998 39 114 2.28E-14 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1284 1326 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Gene3D G3DSA:3.40.50.2300 1082 1211 1.4E-36 T 20-04-2016 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 Gene3D G3DSA:3.30.565.10 867 1036 8.0E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SUPERFAMILY SSF47384 805 880 1.57E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 SUPERFAMILY SSF46689 1283 1331 5.82E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 PANTHER PTHR24423:SF487 701 1239 2.3E-118 T 20-04-2016 APS56_RS13710 af14c8b99387c70971f770449d36caa6 1332 PANTHER PTHR24423:SF487 200 641 2.3E-118 T 20-04-2016 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 5.1E-68 T 20-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 Gene3D G3DSA:2.40.50.140 64 128 6.3E-17 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 114 1.9E-13 T 20-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 PANTHER PTHR30053 1 187 2.8E-70 T 20-04-2016 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 SUPERFAMILY SSF50249 65 127 1.5E-10 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 SUPERFAMILY SSF50249 130 186 4.8E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 9.1E-24 T 20-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 SUPERFAMILY SSF50104 1 63 5.18E-19 T 20-04-2016 IPR008991 Translation protein SH3-like domain APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 20-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 Pfam PF09285 Elongation factor P, C-terminal 130 185 9.4E-27 T 20-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 SMART SM01185 67 122 1.1E-15 T 20-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 Gene3D G3DSA:2.30.30.30 3 63 1.6E-27 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 PIRSF PIRSF005901 1 187 1.7E-60 T 20-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 Gene3D G3DSA:2.40.50.140 130 186 5.0E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 Hamap MF_00141 Elongation factor P [efp]. 1 186 42.601 T 20-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APS56_RS02020 dfa0ea8b33958aca43ada7e27b23c029 188 SMART SM00841 130 185 3.4E-31 T 20-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 Gene3D G3DSA:3.10.580.10 192 317 4.1E-32 T 20-04-2016 APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 Gene3D G3DSA:3.40.50.10490 11 191 8.2E-46 T 20-04-2016 APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 PANTHER PTHR38418 5 301 1.1E-40 T 20-04-2016 APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 PIRSF PIRSF004692 1 321 3.6E-123 T 20-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 311 3.9E-95 T 20-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 Pfam PF01380 SIS domain 40 171 9.0E-28 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 Pfam PF00571 CBS domain 267 317 1.6E-9 T 20-04-2016 IPR000644 CBS domain APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 Pfam PF00571 CBS domain 212 255 3.7E-4 T 20-04-2016 IPR000644 CBS domain APS56_RS05180 33e899d98d1c6769b95732f364e16256 321 SUPERFAMILY SSF53697 9 316 9.34E-62 T 20-04-2016 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 SMART SM00028 287 320 7.6E-7 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 SMART SM00028 219 252 0.48 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 SMART SM00028 106 139 72.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 SUPERFAMILY SSF48452 107 171 2.97E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 SUPERFAMILY SSF48452 219 323 1.8E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 SUPERFAMILY SSF48452 366 406 1.8E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 Pfam PF13181 Tetratricopeptide repeat 287 320 7.6E-9 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 Gene3D G3DSA:1.25.40.10 109 166 1.2E-31 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 Gene3D G3DSA:1.25.40.10 205 405 1.2E-31 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 PANTHER PTHR23083 31 173 3.0E-25 T 20-04-2016 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 PANTHER PTHR23083 219 332 3.0E-25 T 20-04-2016 APS56_RS03260 2cce590a95fd22cb66b062d1bb2857ae 418 PANTHER PTHR23083 362 406 3.0E-25 T 20-04-2016 APS56_RS12815 af81ab60253082e4ec1fd70a038dcf04 192 SMART SM00782 6 52 8.2E-14 T 20-04-2016 IPR013991 PhnA protein N-terminal, proteobacterial APS56_RS12815 af81ab60253082e4ec1fd70a038dcf04 192 Gene3D G3DSA:2.30.30.40 123 192 1.7E-24 T 20-04-2016 APS56_RS12815 af81ab60253082e4ec1fd70a038dcf04 192 Pfam PF03831 PhnA domain 125 191 4.8E-26 T 20-04-2016 IPR013988 PhnA protein, C-terminal APS56_RS12815 af81ab60253082e4ec1fd70a038dcf04 192 SUPERFAMILY SSF82057 120 191 9.61E-23 T 20-04-2016 APS56_RS12815 af81ab60253082e4ec1fd70a038dcf04 192 PANTHER PTHR30305 1 192 7.3E-64 T 20-04-2016 APS56_RS12815 af81ab60253082e4ec1fd70a038dcf04 192 PANTHER PTHR30305:SF2 1 192 7.3E-64 T 20-04-2016 APS56_RS16475 6967a9b74515149027dae7cbbd8da0bd 218 PANTHER PTHR10655:SF17 20 218 1.1E-34 T 20-04-2016 APS56_RS16475 6967a9b74515149027dae7cbbd8da0bd 218 PANTHER PTHR10655 20 218 1.1E-34 T 20-04-2016 APS56_RS16475 6967a9b74515149027dae7cbbd8da0bd 218 SUPERFAMILY SSF53474 13 216 3.35E-48 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS16475 6967a9b74515149027dae7cbbd8da0bd 218 Gene3D G3DSA:3.40.50.1820 2 217 4.2E-52 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS16475 6967a9b74515149027dae7cbbd8da0bd 218 Pfam PF02230 Phospholipase/Carboxylesterase 18 216 4.1E-27 T 20-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 APS56_RS03205 8370d15a28610ec3936786e0d1b876db 199 Pfam PF00694 Aconitase C-terminal domain 5 124 1.3E-31 T 20-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03205 8370d15a28610ec3936786e0d1b876db 199 SUPERFAMILY SSF52016 4 193 1.65E-47 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APS56_RS03205 8370d15a28610ec3936786e0d1b876db 199 PANTHER PTHR11670:SF27 5 198 3.3E-68 T 20-04-2016 APS56_RS03205 8370d15a28610ec3936786e0d1b876db 199 PANTHER PTHR11670 5 198 3.3E-68 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS03205 8370d15a28610ec3936786e0d1b876db 199 Gene3D G3DSA:3.20.19.10 4 185 1.1E-37 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APS56_RS03205 8370d15a28610ec3936786e0d1b876db 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 5 190 2.0E-53 T 20-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 Pfam PF07715 TonB-dependent Receptor Plug Domain 155 233 7.9E-9 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 Gene3D G3DSA:2.40.170.20 234 814 7.6E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 PANTHER PTHR32552:SF0 312 623 1.8E-24 T 20-04-2016 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 PANTHER PTHR32552:SF0 648 814 1.8E-24 T 20-04-2016 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 PANTHER PTHR32552:SF0 121 293 1.8E-24 T 20-04-2016 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 Gene3D G3DSA:2.170.130.10 156 233 1.3E-11 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 SUPERFAMILY SSF56935 152 814 1.83E-69 T 20-04-2016 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 Gene3D G3DSA:2.60.40.1120 39 109 3.4E-11 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 PANTHER PTHR32552 312 623 1.8E-24 T 20-04-2016 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 PANTHER PTHR32552 648 814 1.8E-24 T 20-04-2016 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 PANTHER PTHR32552 121 293 1.8E-24 T 20-04-2016 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 SUPERFAMILY SSF49464 37 126 4.45E-13 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 Pfam PF13715 CarboxypepD_reg-like domain 40 118 4.1E-12 T 20-04-2016 APS56_RS16150 a07fb4fba44be676fe04db598ff65bf5 839 Pfam PF14905 Outer membrane protein beta-barrel family 390 812 3.5E-108 T 20-04-2016 APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 SUPERFAMILY SSF52540 332 577 2.2E-86 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 Gene3D G3DSA:3.40.50.300 341 570 5.5E-78 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 Pfam PF00664 ABC transporter transmembrane region 18 297 3.3E-39 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 SMART SM00382 367 553 5.2E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 SUPERFAMILY SSF90123 7 326 9.94E-67 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 Pfam PF00005 ABC transporter 358 506 2.4E-34 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 PANTHER PTHR24221 9 585 1.1E-187 T 20-04-2016 APS56_RS05150 1e5714ba57b1697fe4f0e7ecddd6fed7 585 Gene3D G3DSA:1.20.1560.10 7 325 1.0E-64 T 20-04-2016 APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 SUPERFAMILY SSF52540 75 359 6.17E-75 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 SMART SM00487 20 223 9.1E-61 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 Gene3D G3DSA:3.40.50.300 1 212 3.4E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.5E-27 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 Pfam PF00270 DEAD/DEAH box helicase 26 196 2.4E-51 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 Gene3D G3DSA:3.40.50.300 213 371 9.8E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 SMART SM00490 259 340 2.2E-31 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 PANTHER PTHR24031 1 378 1.0E-163 T 20-04-2016 APS56_RS05475 66fabb574609eb17cabc14d8983731dc 412 PANTHER PTHR24031:SF261 1 378 1.0E-163 T 20-04-2016 APS56_RS07285 2db90807225da9193e7e3469954f5ccd 671 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 68 210 2.9E-7 T 20-04-2016 IPR024618 Domain of unknown function DUF3857 APS56_RS07285 2db90807225da9193e7e3469954f5ccd 671 Pfam PF01841 Transglutaminase-like superfamily 323 390 3.1E-5 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS06210 2b88c3b936607250c9a19b5537367e0e 245 Pfam PF02754 Cysteine-rich domain 3 83 1.4E-16 T 20-04-2016 IPR004017 Cysteine-rich domain APS56_RS06210 2b88c3b936607250c9a19b5537367e0e 245 Pfam PF02754 Cysteine-rich domain 127 221 2.2E-12 T 20-04-2016 IPR004017 Cysteine-rich domain APS56_RS06210 2b88c3b936607250c9a19b5537367e0e 245 PANTHER PTHR30296:SF0 2 243 5.8E-103 T 20-04-2016 APS56_RS06210 2b88c3b936607250c9a19b5537367e0e 245 PANTHER PTHR30296 2 243 5.8E-103 T 20-04-2016 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 SUPERFAMILY SSF50249 2 123 5.83E-52 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 3.1E-68 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 Pfam PF00164 Ribosomal protein S12/S23 11 123 4.3E-44 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.0E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.0E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.0E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.0E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.0E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.0E-59 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.171 T 20-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 PIRSF PIRSF002133 1 124 2.0E-55 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 Gene3D G3DSA:2.40.50.140 1 123 1.4E-64 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13925 fcb7f1912f9b9fc719517b52d00b0b53 124 PANTHER PTHR11652 1 116 7.6E-72 T 20-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 Gene3D G3DSA:2.60.120.260 666 760 1.2E-4 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 168 517 4.9E-121 T 20-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 35 164 3.7E-20 T 20-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PANTHER PTHR22600:SF21 249 673 9.8E-229 T 20-04-2016 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PANTHER PTHR22600:SF21 7 228 9.8E-229 T 20-04-2016 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 Gene3D G3DSA:3.20.20.80 166 582 2.9E-138 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 SUPERFAMILY SSF51445 168 530 2.98E-128 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 SUPERFAMILY SSF49785 664 757 4.01E-6 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 162 179 1.1E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 119 139 1.1E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 191 212 1.1E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 266 283 1.1E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 499 516 1.1E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 481 497 1.1E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 337 350 1.1E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PRINTS PR00738 Glycosyl hydrolase family 20 signature 315 333 1.1E-45 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 Gene3D G3DSA:3.30.379.10 10 165 1.0E-31 T 20-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PANTHER PTHR22600 249 673 9.8E-229 T 20-04-2016 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 PANTHER PTHR22600 7 228 9.8E-229 T 20-04-2016 APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 Pfam PF00754 F5/8 type C domain 664 759 4.3E-7 T 20-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain APS56_RS03055 de1f482183d899049b0d3949c8fdc77c 778 SUPERFAMILY SSF55545 34 167 1.06E-23 T 20-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 Pfam PF02146 Sir2 family 9 176 2.9E-46 T 20-04-2016 IPR003000 Sirtuin family GO:0070403 APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 SUPERFAMILY SSF52467 2 223 4.36E-66 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 Gene3D G3DSA:3.40.50.1220 2 19 2.6E-37 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 Gene3D G3DSA:3.40.50.1220 69 104 2.6E-37 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 Gene3D G3DSA:3.40.50.1220 152 223 2.6E-37 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 PANTHER PTHR11085 2 193 7.6E-59 T 20-04-2016 IPR003000 Sirtuin family GO:0070403 APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 Gene3D G3DSA:3.30.1600.10 20 57 3.0E-19 T 20-04-2016 IPR026591 Sirtuin family, catalytic core small domain APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 Gene3D G3DSA:3.30.1600.10 105 147 3.0E-19 T 20-04-2016 IPR026591 Sirtuin family, catalytic core small domain APS56_RS15405 de5f299267fa76a4716de85592c0fa70 224 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 2 224 49.774 T 20-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 SMART SM00363 93 157 1.1E-17 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 PANTHER PTHR11831 1 201 3.0E-77 T 20-04-2016 IPR022801 Ribosomal protein S4/S9 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 Gene3D G3DSA:1.10.1050.10 1 99 1.2E-40 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 2.3E-75 T 20-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 33.943 T 20-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 SMART SM01390 3 92 5.5E-45 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 Gene3D G3DSA:3.10.290.10 100 183 9.1E-29 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 Pfam PF01479 S4 domain 94 140 8.5E-20 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 SUPERFAMILY SSF55174 3 201 1.24E-64 T 20-04-2016 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 PANTHER PTHR11831:SF4 1 201 3.0E-77 T 20-04-2016 APS56_RS14065 572bb13f99ff06016b72f252e2757598 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 92 7.4E-27 T 20-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 PANTHER PTHR10836 1 331 1.1E-160 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 SMART SM00846 2 151 8.9E-68 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 6.8E-28 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 6.8E-28 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 6.8E-28 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 6.8E-28 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 6.8E-28 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 Gene3D G3DSA:3.40.50.720 1 159 2.4E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 323 1.5E-117 T 20-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2 151 7.0E-54 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 PANTHER PTHR10836:SF50 1 331 1.1E-160 T 20-04-2016 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 311 5.2E-56 T 20-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 Gene3D G3DSA:3.30.360.10 160 313 6.3E-64 T 20-04-2016 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 SUPERFAMILY SSF51735 2 178 3.23E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 SUPERFAMILY SSF55347 151 312 1.94E-61 T 20-04-2016 APS56_RS14720 823abeb4a2bfa13a1bb8d51e534cf836 334 PIRSF PIRSF000149 1 332 6.2E-115 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS08610 2b4b40c09de9846eace282712630a15d 243 SUPERFAMILY SSF53067 1 105 3.19E-15 T 20-04-2016 APS56_RS08610 2b4b40c09de9846eace282712630a15d 243 PANTHER PTHR34265 1 242 3.3E-46 T 20-04-2016 APS56_RS08610 2b4b40c09de9846eace282712630a15d 243 Gene3D G3DSA:3.30.420.40 82 242 7.7E-48 T 20-04-2016 APS56_RS08610 2b4b40c09de9846eace282712630a15d 243 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 241 22.598 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APS56_RS08610 2b4b40c09de9846eace282712630a15d 243 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 236 7.7E-43 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APS56_RS08610 2b4b40c09de9846eace282712630a15d 243 Pfam PF03309 Type III pantothenate kinase 3 193 2.7E-43 T 20-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APS56_RS08610 2b4b40c09de9846eace282712630a15d 243 SUPERFAMILY SSF53067 112 238 7.25E-35 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 SMART SM00292 589 665 1.1E-7 T 20-04-2016 IPR001357 BRCT domain APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Gene3D G3DSA:1.10.150.20 430 498 3.0E-25 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Pfam PF12826 Helix-hairpin-helix motif 505 568 2.9E-23 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 SUPERFAMILY SSF52113 590 662 8.14E-15 T 20-04-2016 IPR001357 BRCT domain APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 SUPERFAMILY SSF56091 3 310 7.3E-110 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 PANTHER PTHR23389:SF9 1 520 1.5E-178 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 326 341 - T 20-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 402 428 3.7E-8 T 20-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Gene3D G3DSA:1.10.287.610 2 67 6.7E-24 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 SMART SM00532 3 443 5.8E-227 T 20-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 PIRSF PIRSF001604 1 665 2.6E-245 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Gene3D G3DSA:2.40.50.140 316 385 5.5E-32 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Gene3D G3DSA:3.30.470.30 118 247 6.8E-40 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 660 2.6E-244 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 PANTHER PTHR23389 1 520 1.5E-178 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Hamap MF_01588 DNA ligase [ligA]. 5 664 46.585 T 20-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Gene3D G3DSA:1.10.150.20 499 579 1.8E-28 T 20-04-2016 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 SUPERFAMILY SSF50249 313 395 3.26E-25 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 SUPERFAMILY SSF47781 399 578 2.63E-58 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 589 661 1.3E-14 T 20-04-2016 IPR001357 BRCT domain APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Gene3D G3DSA:3.40.50.10190 590 662 9.1E-20 T 20-04-2016 IPR001357 BRCT domain APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 313 1.8E-116 T 20-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APS56_RS16340 37bdaf710378e7bf67d3d4c287bc950c 665 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 317 393 7.2E-35 T 20-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APS56_RS02405 8c60613233d21a842aa5d9afd35cde9a 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 176 202 2.7E-8 T 20-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS02405 8c60613233d21a842aa5d9afd35cde9a 212 Gene3D G3DSA:3.40.30.10 3 209 7.7E-63 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS02405 8c60613233d21a842aa5d9afd35cde9a 212 PIRSF PIRSF000239 1 211 4.3E-58 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APS56_RS02405 8c60613233d21a842aa5d9afd35cde9a 212 Pfam PF00578 AhpC/TSA family 4 155 2.8E-28 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS02405 8c60613233d21a842aa5d9afd35cde9a 212 SUPERFAMILY SSF52833 1 209 4.14E-57 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS02405 8c60613233d21a842aa5d9afd35cde9a 212 PANTHER PTHR10681 1 212 2.3E-62 T 20-04-2016 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 Gene3D G3DSA:2.40.30.10 130 282 5.6E-57 T 20-04-2016 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 Gene3D G3DSA:3.40.50.80 295 418 1.3E-33 T 20-04-2016 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 44 121 2.1E-11 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 SUPERFAMILY SSF63380 111 183 2.84E-36 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 SUPERFAMILY SSF63380 216 288 2.84E-36 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 Gene3D G3DSA:3.10.20.30 46 129 1.8E-21 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 Pfam PF00970 Oxidoreductase FAD-binding domain 216 284 6.9E-6 T 20-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 313 1.2E-5 T 20-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 401 409 1.2E-5 T 20-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 222 229 1.2E-5 T 20-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 260 269 1.2E-5 T 20-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PANTHER PTHR19370 218 435 3.6E-117 T 20-04-2016 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PANTHER PTHR19370 67 180 3.6E-117 T 20-04-2016 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PIRSF PIRSF000044 7 435 1.1E-174 T 20-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 SUPERFAMILY SSF54292 45 130 1.13E-21 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PANTHER PTHR19370:SF32 218 435 3.6E-117 T 20-04-2016 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 PANTHER PTHR19370:SF32 67 180 3.6E-117 T 20-04-2016 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 Pfam PF00175 Oxidoreductase NAD-binding domain 296 416 1.1E-11 T 20-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 11 435 7.0E-170 T 20-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 9 435 62.911 T 20-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APS56_RS06455 380f8ea3921d89b403f2acb6ab126762 435 SUPERFAMILY SSF52343 275 431 8.12E-32 T 20-04-2016 APS56_RS03900 94d4ea631c9bdc8f01968838772cf948 157 SUPERFAMILY SSF75217 1 155 1.5E-48 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS03900 94d4ea631c9bdc8f01968838772cf948 157 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 156 26.839 T 20-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS03900 94d4ea631c9bdc8f01968838772cf948 157 PANTHER PTHR33603 1 156 1.9E-57 T 20-04-2016 APS56_RS03900 94d4ea631c9bdc8f01968838772cf948 157 PIRSF PIRSF004505 1 156 1.6E-48 T 20-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS03900 94d4ea631c9bdc8f01968838772cf948 157 Gene3D G3DSA:3.40.1280.10 1 156 1.8E-54 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS03900 94d4ea631c9bdc8f01968838772cf948 157 PANTHER PTHR33603:SF1 1 156 1.9E-57 T 20-04-2016 APS56_RS03900 94d4ea631c9bdc8f01968838772cf948 157 Pfam PF02590 Predicted SPOUT methyltransferase 1 155 5.7E-52 T 20-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 Gene3D G3DSA:1.10.8.60 536 617 2.9E-29 T 20-04-2016 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 Gene3D G3DSA:3.30.230.10 625 805 8.4E-70 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 43 236 1.8E-36 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 386 523 1.4E-24 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 Gene3D G3DSA:3.40.50.300 341 535 7.1E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 SUPERFAMILY SSF54211 630 805 5.69E-52 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 PANTHER PTHR10046:SF24 13 810 0.0 T 20-04-2016 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 SMART SM00464 43 237 3.0E-50 T 20-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 710 718 - T 20-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 PANTHER PTHR10046 13 810 0.0 T 20-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 Hamap MF_01973 Lon protease [lon]. 44 806 67.538 T 20-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 603 806 2.5E-84 T 20-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 737 756 1.7E-52 T 20-04-2016 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 707 726 1.7E-52 T 20-04-2016 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 390 409 1.7E-52 T 20-04-2016 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 629 645 1.7E-52 T 20-04-2016 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 760 778 1.7E-52 T 20-04-2016 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 TIGRFAM TIGR00763 lon: endopeptidase La 45 805 4.1E-281 T 20-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 SMART SM00382 382 526 7.6E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 SUPERFAMILY SSF52540 344 622 2.84E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 PIRSF PIRSF001174 29 809 4.3E-296 T 20-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APS56_RS01600 2ad418965595f3828170ffbb588eb0c8 816 SUPERFAMILY SSF88697 43 235 5.72E-45 T 20-04-2016 IPR015947 PUA-like domain APS56_RS10040 68e0dd1b8df2a5e7f71ba0acd2c54c86 68 PANTHER PTHR37301 2 68 2.7E-31 T 20-04-2016 APS56_RS10040 68e0dd1b8df2a5e7f71ba0acd2c54c86 68 SUPERFAMILY SSF47413 2 67 6.7E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS10040 68e0dd1b8df2a5e7f71ba0acd2c54c86 68 SMART SM00530 6 62 1.0E-4 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS10040 68e0dd1b8df2a5e7f71ba0acd2c54c86 68 Gene3D G3DSA:1.10.260.40 1 67 6.9E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS10040 68e0dd1b8df2a5e7f71ba0acd2c54c86 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 5.5E-23 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS10800 54a6c848f95230621467a2aa96c00055 373 Pfam PF00534 Glycosyl transferases group 1 196 340 1.4E-13 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS10800 54a6c848f95230621467a2aa96c00055 373 SUPERFAMILY SSF53756 35 341 1.15E-23 T 20-04-2016 APS56_RS10800 54a6c848f95230621467a2aa96c00055 373 PANTHER PTHR12526:SF301 138 342 1.9E-12 T 20-04-2016 APS56_RS10800 54a6c848f95230621467a2aa96c00055 373 PANTHER PTHR12526 138 342 1.9E-12 T 20-04-2016 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 SMART SM00382 159 302 4.7E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 SUPERFAMILY SSF52540 138 381 1.77E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 Pfam PF00072 Response regulator receiver domain 8 117 1.7E-20 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 PANTHER PTHR32071:SF18 1 436 1.1E-167 T 20-04-2016 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 Pfam PF00158 Sigma-54 interaction domain 139 305 1.8E-68 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 225 240 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 PANTHER PTHR32071 1 436 1.1E-167 T 20-04-2016 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 SUPERFAMILY SSF52172 5 182 6.55E-37 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 Gene3D G3DSA:3.40.50.300 137 311 3.5E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 Gene3D G3DSA:3.40.50.2300 4 126 5.6E-31 T 20-04-2016 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 163 176 - T 20-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 Pfam PF02954 Bacterial regulatory protein, Fis family 397 435 2.4E-12 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 420 4.4E-8 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 436 4.4E-8 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 SMART SM00448 6 116 5.5E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 Gene3D G3DSA:1.10.8.60 312 384 3.4E-24 T 20-04-2016 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 SUPERFAMILY SSF46689 392 435 4.44E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 Gene3D G3DSA:1.10.10.60 395 435 1.4E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06285 82873c1713cfead65cc681135b7da0bd 436 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 20-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 SUPERFAMILY SSF52016 168 395 3.14E-30 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 Pfam PF06434 Aconitate hydratase 2 N-terminus 175 407 2.7E-61 T 20-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 Gene3D G3DSA:3.30.499.10 738 916 3.2E-34 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 SUPERFAMILY SSF53732 404 917 3.27E-70 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 Gene3D G3DSA:3.30.499.10 433 558 4.8E-41 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 Pfam PF00330 Aconitase family (aconitate hydratase) 412 896 2.2E-56 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 Pfam PF11791 Aconitate B N-terminal domain 6 162 4.8E-43 T 20-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 Gene3D G3DSA:3.20.19.10 169 385 1.9E-45 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 PANTHER PTHR11670:SF39 440 675 2.3E-42 T 20-04-2016 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 PANTHER PTHR11670:SF39 694 802 2.3E-42 T 20-04-2016 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 PANTHER PTHR11670:SF39 823 914 2.3E-42 T 20-04-2016 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 SUPERFAMILY SSF74778 4 166 3.66E-43 T 20-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 Gene3D G3DSA:3.40.1060.10 559 719 5.4E-51 T 20-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 PANTHER PTHR11670 440 675 2.3E-42 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 PANTHER PTHR11670 694 802 2.3E-42 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16610 2ceda3b79a763710953bf0e5dc896a9f 925 PANTHER PTHR11670 823 914 2.3E-42 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 SUPERFAMILY SSF75620 3 309 7.59E-116 T 20-04-2016 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 PANTHER PTHR11075:SF6 1 316 1.3E-132 T 20-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 Gene3D G3DSA:3.30.160.20 171 248 3.0E-33 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 Pfam PF00472 RF-1 domain 172 281 1.5E-37 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 Pfam PF03462 PCRF domain 3 163 6.7E-50 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 SMART SM00937 30 138 1.6E-39 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 5 306 3.6E-122 T 20-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 188 204 - T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 PANTHER PTHR11075 1 316 1.3E-132 T 20-04-2016 APS56_RS16165 eccb686e7e6e555f327ffd3ac3cb463c 317 Gene3D G3DSA:1.20.58.410 5 59 1.4E-6 T 20-04-2016 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 7.3E-43 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 274 5.1E-88 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 SUPERFAMILY SSF55831 1 273 4.71E-128 T 20-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.9E-40 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 PRINTS PR00108 Thymidylate synthase family signature 112 131 1.9E-40 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 PRINTS PR00108 Thymidylate synthase family signature 169 195 1.9E-40 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 PRINTS PR00108 Thymidylate synthase family signature 207 224 1.9E-40 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 Pfam PF00303 Thymidylate synthase 2 274 1.8E-121 T 20-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 Gene3D G3DSA:3.30.572.10 1 274 2.0E-129 T 20-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 Hamap MF_00008 Thymidylate synthase [thyA]. 1 274 45.733 T 20-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APS56_RS08830 91e723ed8bd7b9f8a3f3292060bd3645 274 PANTHER PTHR11548 1 274 7.8E-187 T 20-04-2016 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 Pfam PF07724 AAA domain (Cdc48 subfamily) 106 302 3.1E-45 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 394 3.8E-167 T 20-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 110 123 - T 20-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 406 45.594 T 20-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 SMART SM00994 5 44 2.3E-17 T 20-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 SMART SM01086 309 400 4.5E-27 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 SMART SM00382 106 263 1.3E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 PANTHER PTHR11262:SF4 3 398 2.9E-193 T 20-04-2016 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 SUPERFAMILY SSF52540 60 398 1.37E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 Gene3D G3DSA:3.40.50.300 286 303 1.1E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 Gene3D G3DSA:3.40.50.300 61 248 1.1E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 309 386 3.7E-14 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 Gene3D G3DSA:1.10.8.60 308 404 2.4E-29 T 20-04-2016 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 PANTHER PTHR11262 3 398 2.9E-193 T 20-04-2016 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 Pfam PF06689 ClpX C4-type zinc finger 7 42 1.8E-14 T 20-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APS56_RS13175 4df725050916ebf3f382d5a71594164e 410 SUPERFAMILY SSF57716 6 41 8.7E-9 T 20-04-2016 APS56_RS15095 4e9b35939d55e8b95370007339001326 332 Gene3D G3DSA:2.60.120.200 19 228 1.7E-47 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15095 4e9b35939d55e8b95370007339001326 332 Gene3D G3DSA:2.60.120.200 266 323 1.7E-47 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15095 4e9b35939d55e8b95370007339001326 332 SUPERFAMILY SSF49899 44 217 5.93E-24 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15095 4e9b35939d55e8b95370007339001326 332 SUPERFAMILY SSF49899 253 288 5.93E-24 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15095 4e9b35939d55e8b95370007339001326 332 Pfam PF08787 Alginate lyase 43 323 1.2E-64 T 20-04-2016 IPR014895 Alginate lyase 2 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Pfam PF12833 Helix-turn-helix domain 1207 1284 4.4E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Gene3D G3DSA:1.10.10.60 1238 1283 3.2E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SUPERFAMILY SSF63829 384 575 4.9E-16 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1238 1280 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1253 1268 3.7E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1268 1284 3.7E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SUPERFAMILY SSF47384 769 849 8.44E-18 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Pfam PF00072 Response regulator receiver domain 1044 1153 6.3E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Pfam PF07494 Two component regulator propeller 22 44 0.0047 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Pfam PF07494 Two component regulator propeller 190 211 0.0091 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Pfam PF07494 Two component regulator propeller 539 562 0.0012 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SUPERFAMILY SSF55874 837 999 7.47E-33 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Gene3D G3DSA:3.30.565.10 835 1000 3.0E-32 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SMART SM00448 1041 1153 1.1E-32 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Gene3D G3DSA:1.10.287.130 774 834 4.7E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SUPERFAMILY SSF46689 1238 1284 9.86E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Gene3D G3DSA:2.120.10.30 384 495 3.3E-8 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Gene3D G3DSA:2.120.10.30 509 631 1.6E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Gene3D G3DSA:2.120.10.30 61 276 2.7E-10 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PANTHER PTHR24423:SF487 761 1193 4.0E-116 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PANTHER PTHR24423:SF487 6 112 4.0E-116 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PANTHER PTHR24423:SF487 282 345 4.0E-116 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SMART SM00388 782 848 1.2E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SMART SM00387 893 1001 5.4E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Pfam PF07495 Y_Y_Y domain 665 728 1.1E-12 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SUPERFAMILY SSF63829 82 284 6.54E-13 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PANTHER PTHR24423 761 1193 4.0E-116 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PANTHER PTHR24423 282 345 4.0E-116 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PANTHER PTHR24423:SF487 434 472 4.0E-116 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SUPERFAMILY SSF52172 1038 1170 8.25E-34 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Pfam PF00512 His Kinase A (phospho-acceptor) domain 783 848 3.3E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 894 999 5.6E-15 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 Gene3D G3DSA:3.40.50.2300 1036 1168 2.1E-39 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 SMART SM00342 1201 1284 8.4E-23 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PANTHER PTHR24423 434 472 4.0E-116 T 20-04-2016 APS56_RS00025 7d9dd3675474e5a0231711e7232720d9 1286 PANTHER PTHR24423 6 112 4.0E-116 T 20-04-2016 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SMART SM00387 551 658 4.7E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 552 657 6.2E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Pfam PF13426 PAS domain 193 296 0.0014 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Pfam PF13426 PAS domain 324 423 3.8E-13 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Pfam PF13426 PAS domain 68 168 1.3E-7 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SMART SM00091 310 377 2.1E-8 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SMART SM00091 57 122 1.2E-4 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SMART SM00091 181 250 22.0 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SUPERFAMILY SSF47384 432 510 1.31E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SUPERFAMILY SSF55785 166 296 8.2E-13 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Gene3D G3DSA:3.30.450.20 52 166 3.8E-17 T 20-04-2016 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Gene3D G3DSA:3.30.450.20 302 422 3.9E-24 T 20-04-2016 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SMART SM00086 382 424 9.5E-8 T 20-04-2016 IPR001610 PAC motif APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SMART SM00086 128 169 1.2 T 20-04-2016 IPR001610 PAC motif APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Gene3D G3DSA:1.10.287.130 436 497 1.3E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SUPERFAMILY SSF55785 315 425 2.97E-23 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Gene3D G3DSA:3.30.565.10 498 657 2.0E-36 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SUPERFAMILY SSF55874 502 656 5.5E-36 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 638 2.3E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 603 2.3E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 PRINTS PR00344 Bacterial sensor protein C-terminal signature 644 657 2.3E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 617 2.3E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SMART SM00388 444 512 1.1E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 PANTHER PTHR24423 308 656 5.4E-100 T 20-04-2016 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 PANTHER PTHR24423 38 184 5.4E-100 T 20-04-2016 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Gene3D G3DSA:3.30.450.20 167 296 4.7E-15 T 20-04-2016 APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 57 176 3.0E-14 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 307 428 3.8E-20 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 SUPERFAMILY SSF55785 68 178 2.44E-15 T 20-04-2016 IPR000014 PAS domain APS56_RS15620 6d2a6dc317fcc57b7510b5dae1558dc0 658 Pfam PF00512 His Kinase A (phospho-acceptor) domain 446 510 1.0E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 719 733 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 165 179 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PANTHER PTHR11405 1 924 0.0 T 20-04-2016 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 SUPERFAMILY SSF56059 683 926 2.12E-85 T 20-04-2016 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Gene3D G3DSA:3.40.50.20 538 672 4.0E-56 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PANTHER PTHR11405:SF5 1 924 0.0 T 20-04-2016 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 SMART SM01209 689 851 0.0045 T 20-04-2016 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.0E-61 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.0E-61 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 240 257 2.0E-61 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 299 328 2.0E-61 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 205 224 2.0E-61 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 169 181 2.0E-61 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 381 399 2.0E-61 T 20-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 426 546 9.5E-39 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Gene3D G3DSA:3.40.50.20 6 108 4.0E-38 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Gene3D G3DSA:3.30.470.20 201 400 2.9E-73 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Gene3D G3DSA:3.30.470.20 758 931 5.7E-56 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 SUPERFAMILY SSF52440 567 684 4.46E-48 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 SUPERFAMILY SSF52440 1 128 4.75E-42 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 SUPERFAMILY SSF56059 129 402 1.48E-100 T 20-04-2016 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 SMART SM01096 423 546 1.5E-58 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Gene3D G3DSA:1.10.1030.10 401 537 2.1E-47 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 336 2.4E-64 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 683 882 6.7E-28 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 SUPERFAMILY SSF48108 398 551 1.83E-44 T 20-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 848 855 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Gene3D G3DSA:3.30.1490.20 142 200 5.3E-19 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 Gene3D G3DSA:3.30.1490.20 696 757 1.3E-18 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS15270 0f0a460b255331089b79bb5a9b9c3adf 950 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 933 0.0 T 20-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS12145 a75461ff863cbcf2a19f4b8d6ba26ad2 306 Pfam PF03301 Tryptophan 2,3-dioxygenase 33 166 1.3E-24 T 20-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 APS56_RS12145 a75461ff863cbcf2a19f4b8d6ba26ad2 306 SUPERFAMILY SSF140959 34 301 1.16E-73 T 20-04-2016 APS56_RS12145 a75461ff863cbcf2a19f4b8d6ba26ad2 306 PANTHER PTHR10138 1 145 1.3E-25 T 20-04-2016 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|UniPathway: UPA00333 APS56_RS12145 a75461ff863cbcf2a19f4b8d6ba26ad2 306 PANTHER PTHR10138:SF0 1 145 1.3E-25 T 20-04-2016 APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 563 779 4.7E-38 T 20-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 SUPERFAMILY SSF52540 586 769 1.31E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 PANTHER PTHR32309:SF13 189 789 1.4E-122 T 20-04-2016 APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 PANTHER PTHR32309:SF13 1 126 1.4E-122 T 20-04-2016 APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 Pfam PF13614 AAA domain 595 716 3.1E-9 T 20-04-2016 IPR025669 AAA domain APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 Pfam PF13807 G-rich domain on putative tyrosine kinase 443 516 9.4E-11 T 20-04-2016 IPR032807 Tyrosine kinase, G-rich domain APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 Gene3D G3DSA:3.40.50.300 586 768 1.6E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 PANTHER PTHR32309 189 789 1.4E-122 T 20-04-2016 APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 PANTHER PTHR32309 1 126 1.4E-122 T 20-04-2016 APS56_RS02100 083092bf7b667226b1b74e68c2533d09 794 Pfam PF02706 Chain length determinant protein 18 254 2.2E-9 T 20-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APS56_RS01815 e00cd3fc373f05e829c8837b8dd28418 182 SMART SM00563 32 144 1.8E-18 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS01815 e00cd3fc373f05e829c8837b8dd28418 182 PANTHER PTHR10434 11 161 4.8E-36 T 20-04-2016 APS56_RS01815 e00cd3fc373f05e829c8837b8dd28418 182 Pfam PF01553 Acyltransferase 19 137 1.1E-10 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS01815 e00cd3fc373f05e829c8837b8dd28418 182 Gene3D G3DSA:3.40.1130.10 12 140 1.1E-4 T 20-04-2016 APS56_RS01815 e00cd3fc373f05e829c8837b8dd28418 182 PANTHER PTHR10434:SF9 11 161 4.8E-36 T 20-04-2016 APS56_RS01815 e00cd3fc373f05e829c8837b8dd28418 182 SUPERFAMILY SSF69593 8 145 4.71E-18 T 20-04-2016 APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 SUPERFAMILY SSF52518 5 346 4.46E-69 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 SUPERFAMILY SSF52922 457 577 2.14E-23 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 PANTHER PTHR11624 19 580 1.1E-265 T 20-04-2016 IPR033247 Transketolase family APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 Pfam PF02779 Transketolase, pyrimidine binding domain 284 444 3.7E-35 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 Gene3D G3DSA:3.40.50.920 462 579 2.4E-28 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 Gene3D G3DSA:3.40.50.970 263 461 2.0E-68 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 205 581 1.3E-142 T 20-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 586 40.264 T 20-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 SUPERFAMILY SSF52518 282 470 8.1E-53 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 ProSitePatterns PS00802 Transketolase signature 2. 390 406 - T 20-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 199 7.3E-88 T 20-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 Gene3D G3DSA:3.40.50.970 5 262 1.2E-51 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 Pfam PF02780 Transketolase, C-terminal domain 461 576 1.8E-21 T 20-04-2016 IPR033248 Transketolase, C-terminal domain APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 PANTHER PTHR11624:SF20 19 580 1.1E-265 T 20-04-2016 APS56_RS09265 077f3a3473b497e4bede59159a6d64d6 586 SMART SM00861 284 449 9.2E-62 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Gene3D G3DSA:2.60.40.1120 26 103 2.0E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 198 228 6.3E-15 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 SUPERFAMILY SSF56935 441 776 5.04E-75 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 SUPERFAMILY SSF56935 867 914 5.04E-75 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 SUPERFAMILY SSF56935 103 246 5.04E-75 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 SUPERFAMILY SSF56935 318 407 5.04E-75 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 SUPERFAMILY SSF56935 946 1018 5.04E-75 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1043 4.4E-182 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532:SF57 867 1041 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532:SF57 575 784 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532:SF57 1 438 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532:SF57 802 848 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532:SF57 521 550 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Pfam PF13715 CarboxypepD_reg-like domain 27 107 3.7E-18 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532 867 1041 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532 575 784 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532 1 438 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532 802 848 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 PANTHER PTHR11532 521 550 1.0E-141 T 20-04-2016 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Pfam PF07715 TonB-dependent Receptor Plug Domain 118 222 7.3E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Gene3D G3DSA:2.40.170.20 227 234 1.0E-30 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Gene3D G3DSA:2.40.170.20 270 271 1.0E-30 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Gene3D G3DSA:2.40.170.20 443 799 1.0E-30 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Gene3D G3DSA:2.40.170.20 323 393 1.0E-30 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Gene3D G3DSA:2.40.170.20 880 914 1.0E-30 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 SUPERFAMILY SSF49464 26 105 4.97E-19 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS13915 886aeafd8644ea43d702efe018af1bce 1043 Gene3D G3DSA:2.170.130.10 104 226 8.8E-22 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS08835 78e620fe95b6132c0201083e601e79cf 98 SUPERFAMILY SSF81296 15 93 1.26E-18 T 20-04-2016 IPR014756 Immunoglobulin E-set APS56_RS08835 78e620fe95b6132c0201083e601e79cf 98 Gene3D G3DSA:2.60.40.10 13 84 2.9E-11 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS08835 78e620fe95b6132c0201083e601e79cf 98 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 23 80 2.9E-11 T 20-04-2016 IPR032640 AMP-activated protein kinase, glycogen-binding domain APS56_RS00445 31964d001e72f3e42b40e9439357a7ed 255 Pfam PF11306 Protein of unknown function (DUF3108) 13 248 1.5E-35 T 20-04-2016 IPR021457 Protein of unknown function DUF3108 APS56_RS08060 8a03a1a0bcb4396a2361d8c6edf74407 519 PANTHER PTHR22855 4 519 0.0 T 20-04-2016 APS56_RS08060 8a03a1a0bcb4396a2361d8c6edf74407 519 Pfam PF01039 Carboxyl transferase domain 29 517 2.2E-188 T 20-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS08060 8a03a1a0bcb4396a2361d8c6edf74407 519 Gene3D G3DSA:3.90.226.10 256 519 3.0E-92 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08060 8a03a1a0bcb4396a2361d8c6edf74407 519 SUPERFAMILY SSF52096 5 256 9.36E-77 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08060 8a03a1a0bcb4396a2361d8c6edf74407 519 SUPERFAMILY SSF52096 225 519 2.32E-84 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08060 8a03a1a0bcb4396a2361d8c6edf74407 519 Gene3D G3DSA:3.90.226.10 3 255 1.4E-79 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08060 8a03a1a0bcb4396a2361d8c6edf74407 519 PANTHER PTHR22855:SF14 4 519 0.0 T 20-04-2016 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 SUPERFAMILY SSF52540 624 913 3.9E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:3.40.50.300 483 599 1.0E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:3.40.50.300 607 670 1.8E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:3.40.50.300 823 941 1.8E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:3.40.50.300 5 55 1.0E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:3.30.1490.20 138 157 4.7E-11 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:3.30.1490.20 204 248 4.7E-11 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Pfam PF00005 ABC transporter 626 654 6.3E-5 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 ProSitePatterns PS00211 ABC transporters family signature. 832 846 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 8 927 0.0 T 20-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:1.20.1580.10 95 133 3.3E-50 T 20-04-2016 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:1.20.1580.10 410 482 3.3E-50 T 20-04-2016 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:1.20.1580.10 255 288 3.3E-50 T 20-04-2016 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:1.10.8.280 291 409 5.8E-29 T 20-04-2016 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 SMART SM00382 635 910 0.0071 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 SMART SM00382 27 569 15.0 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 PANTHER PTHR32282:SF2 5 943 0.0 T 20-04-2016 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 PANTHER PTHR32282 5 943 0.0 T 20-04-2016 APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 SUPERFAMILY SSF52540 10 208 2.26E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 SUPERFAMILY SSF52540 436 574 2.26E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01555 884de444aa2bc98d0091c42bcfe79579 943 Gene3D G3DSA:1.20.1580.10 696 822 1.0E-54 T 20-04-2016 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 Gene3D G3DSA:3.40.50.880 2 193 1.1E-70 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 PRINTS PR00097 Anthranilate synthase component II signature 41 50 1.9E-5 T 20-04-2016 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 PRINTS PR00097 Anthranilate synthase component II signature 72 83 1.9E-5 T 20-04-2016 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 PRINTS PR00097 Anthranilate synthase component II signature 171 184 1.9E-5 T 20-04-2016 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 192 2.7E-66 T 20-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 SUPERFAMILY SSF52317 3 191 1.94E-51 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 PANTHER PTHR21235 3 191 4.7E-74 T 20-04-2016 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 193 33.829 T 20-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 PANTHER PTHR21235:SF1 3 191 4.7E-74 T 20-04-2016 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 PIRSF PIRSF000495 1 193 1.9E-66 T 20-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APS56_RS01930 a6e426c89dfe29b34cafeda8fd342de7 193 Pfam PF00117 Glutamine amidotransferase class-I 5 191 6.8E-20 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APS56_RS05655 df2e8dda2ce1f9eb486f23793c4f0fb1 714 SUPERFAMILY SSF55486 44 709 1.17E-154 T 20-04-2016 APS56_RS05655 df2e8dda2ce1f9eb486f23793c4f0fb1 714 Gene3D G3DSA:1.10.1370.10 177 382 2.1E-98 T 20-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APS56_RS05655 df2e8dda2ce1f9eb486f23793c4f0fb1 714 Gene3D G3DSA:1.10.1370.10 536 711 2.1E-98 T 20-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APS56_RS05655 df2e8dda2ce1f9eb486f23793c4f0fb1 714 Gene3D G3DSA:3.40.390.10 392 535 3.1E-34 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS05655 df2e8dda2ce1f9eb486f23793c4f0fb1 714 Gene3D G3DSA:1.20.1050.40 42 175 2.2E-26 T 20-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APS56_RS05655 df2e8dda2ce1f9eb486f23793c4f0fb1 714 PANTHER PTHR11804:SF47 35 710 1.1E-260 T 20-04-2016 APS56_RS05655 df2e8dda2ce1f9eb486f23793c4f0fb1 714 Pfam PF01432 Peptidase family M3 259 707 1.4E-87 T 20-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APS56_RS05655 df2e8dda2ce1f9eb486f23793c4f0fb1 714 PANTHER PTHR11804 35 710 1.1E-260 T 20-04-2016 APS56_RS03415 9822f65b162e8fc92254feaf6a970712 194 Gene3D G3DSA:1.10.357.10 6 189 3.5E-23 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APS56_RS03415 9822f65b162e8fc92254feaf6a970712 194 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 72 192 9.6E-10 T 20-04-2016 IPR032551 HTH-type transcriptional repressor, C-terminal APS56_RS03415 9822f65b162e8fc92254feaf6a970712 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 4.2E-14 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS03415 9822f65b162e8fc92254feaf6a970712 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.5E-7 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS03415 9822f65b162e8fc92254feaf6a970712 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.5E-7 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS03415 9822f65b162e8fc92254feaf6a970712 194 SUPERFAMILY SSF46689 6 74 5.49E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS03415 9822f65b162e8fc92254feaf6a970712 194 PANTHER PTHR30055:SF82 1 192 2.0E-32 T 20-04-2016 APS56_RS03415 9822f65b162e8fc92254feaf6a970712 194 PANTHER PTHR30055 1 192 2.0E-32 T 20-04-2016 APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 8 259 5.4E-54 T 20-04-2016 IPR000150 Cof protein GO:0016787 APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 Gene3D G3DSA:3.30.1240.10 86 177 2.2E-18 T 20-04-2016 APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 8 19 - T 20-04-2016 IPR000150 Cof protein GO:0016787 APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 PANTHER PTHR10000:SF27 6 265 6.9E-57 T 20-04-2016 APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 SUPERFAMILY SSF56784 3 264 3.45E-63 T 20-04-2016 IPR023214 HAD-like domain APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 PANTHER PTHR10000 6 265 6.9E-57 T 20-04-2016 APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 Gene3D G3DSA:3.40.50.1000 178 264 1.9E-46 T 20-04-2016 IPR023214 HAD-like domain APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 Gene3D G3DSA:3.40.50.1000 3 76 1.9E-46 T 20-04-2016 IPR023214 HAD-like domain APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 232 3.5E-23 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APS56_RS04005 53d745a04606e8f104fa22e1beb3faee 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 9 259 8.3E-56 T 20-04-2016 IPR023214 HAD-like domain APS56_RS00800 dcfe96700cbb26071ea52ff0b3927e0f 213 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 6 213 33.882 T 20-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APS56_RS00800 dcfe96700cbb26071ea52ff0b3927e0f 213 PANTHER PTHR11579 11 208 1.0E-63 T 20-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APS56_RS00800 dcfe96700cbb26071ea52ff0b3927e0f 213 SUPERFAMILY SSF53335 18 208 1.97E-39 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00800 dcfe96700cbb26071ea52ff0b3927e0f 213 Gene3D G3DSA:3.40.50.150 21 210 8.6E-55 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00800 dcfe96700cbb26071ea52ff0b3927e0f 213 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 135 150 - T 20-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APS56_RS00800 dcfe96700cbb26071ea52ff0b3927e0f 213 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 12 211 3.8E-58 T 20-04-2016 APS56_RS00800 dcfe96700cbb26071ea52ff0b3927e0f 213 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 11 211 6.3E-59 T 20-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 1.6E-103 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 Gene3D G3DSA:3.90.226.10 18 282 1.5E-60 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 PANTHER PTHR22855:SF17 1 282 3.5E-122 T 20-04-2016 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 280 35.508 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 SUPERFAMILY SSF52096 32 282 1.46E-73 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 228 239 2.2E-35 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 128 142 2.2E-35 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 162 180 2.2E-35 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 216 2.2E-35 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 250 259 2.2E-35 T 20-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 PANTHER PTHR22855 1 282 3.5E-122 T 20-04-2016 APS56_RS14315 35992cad7102deecf194edd803ca4d70 285 Pfam PF01039 Carboxyl transferase domain 97 241 3.9E-19 T 20-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS00040 83f6d61a563c3dbb61d96e88cea460dc 273 PANTHER PTHR10088 16 265 1.1E-112 T 20-04-2016 APS56_RS00040 83f6d61a563c3dbb61d96e88cea460dc 273 SUPERFAMILY SSF53697 6 246 8.68E-68 T 20-04-2016 APS56_RS00040 83f6d61a563c3dbb61d96e88cea460dc 273 PANTHER PTHR10088:SF5 16 265 1.1E-112 T 20-04-2016 APS56_RS00040 83f6d61a563c3dbb61d96e88cea460dc 273 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 183 200 - T 20-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APS56_RS00040 83f6d61a563c3dbb61d96e88cea460dc 273 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 273 34.02 T 20-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APS56_RS00040 83f6d61a563c3dbb61d96e88cea460dc 273 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 265 1.6E-98 T 20-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APS56_RS00040 83f6d61a563c3dbb61d96e88cea460dc 273 Pfam PF01380 SIS domain 126 207 5.5E-11 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APS56_RS00040 83f6d61a563c3dbb61d96e88cea460dc 273 Gene3D G3DSA:3.40.50.10490 6 247 1.0E-76 T 20-04-2016 APS56_RS05325 71f86420af97d5d2a6c599e5ddda243b 306 PANTHER PTHR22916 1 266 1.7E-47 T 20-04-2016 APS56_RS05325 71f86420af97d5d2a6c599e5ddda243b 306 SUPERFAMILY SSF53448 3 220 2.06E-52 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05325 71f86420af97d5d2a6c599e5ddda243b 306 Pfam PF00535 Glycosyl transferase family 2 6 170 1.3E-31 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS05325 71f86420af97d5d2a6c599e5ddda243b 306 Gene3D G3DSA:3.90.550.10 3 244 1.1E-53 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 SMART SM00475 5 265 4.9E-107 T 20-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 SMART SM00474 357 538 5.8E-35 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 TIGRFAM TIGR00593 pola: DNA polymerase I 7 950 1.7E-302 T 20-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 SUPERFAMILY SSF47807 177 287 6.58E-31 T 20-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Gene3D G3DSA:3.40.50.1010 6 189 1.0E-60 T 20-04-2016 IPR029060 PIN domain-like APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Gene3D G3DSA:1.20.1060.10 563 683 3.5E-37 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PANTHER PTHR10133 343 949 0.0 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PANTHER PTHR10133 2 285 0.0 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 ProSitePatterns PS00447 DNA polymerase family A signature. 776 795 - T 20-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Gene3D G3DSA:3.30.420.10 369 561 2.2E-67 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Gene3D G3DSA:3.30.70.370 684 733 5.0E-65 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Gene3D G3DSA:3.30.70.370 841 950 5.0E-65 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Gene3D G3DSA:1.10.150.20 734 840 7.3E-33 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 867 883 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 835 846 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 897 910 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 722 745 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 699 714 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 676 698 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 776 801 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PRINTS PR00868 DNA-polymerase family A (pol I) signature 752 765 4.3E-74 T 20-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 SUPERFAMILY SSF56672 543 950 5.78E-152 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 177 268 6.3E-29 T 20-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Pfam PF01612 3'-5' exonuclease 369 537 9.4E-37 T 20-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Pfam PF00476 DNA polymerase family A 571 947 1.2E-155 T 20-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 SMART SM00279 177 212 5.9E-12 T 20-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 SUPERFAMILY SSF88723 4 158 1.64E-48 T 20-04-2016 IPR029060 PIN domain-like APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 157 2.3E-47 T 20-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 SUPERFAMILY SSF53098 370 539 2.44E-47 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 SMART SM00482 707 914 2.8E-114 T 20-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 Gene3D G3DSA:1.10.150.20 190 249 5.2E-26 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PANTHER PTHR10133:SF27 343 949 0.0 T 20-04-2016 APS56_RS13310 c6f9a5d6a12034d31d227eab57a72c99 950 PANTHER PTHR10133:SF27 2 285 0.0 T 20-04-2016 APS56_RS08740 a9c46e831cc5a46a78158830c9243e58 173 PANTHER PTHR38439:SF2 50 173 1.2E-32 T 20-04-2016 APS56_RS08740 a9c46e831cc5a46a78158830c9243e58 173 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 151 166 - T 20-04-2016 IPR028871 Blue (type 1) copper protein, binding site APS56_RS08740 a9c46e831cc5a46a78158830c9243e58 173 TIGRFAM TIGR02695 azurin: azurin 53 170 6.2E-33 T 20-04-2016 IPR014068 Azurin, proteobacteria APS56_RS08740 a9c46e831cc5a46a78158830c9243e58 173 PANTHER PTHR38439 50 173 1.2E-32 T 20-04-2016 APS56_RS08740 a9c46e831cc5a46a78158830c9243e58 173 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 54 168 2.0E-21 T 20-04-2016 APS56_RS08740 a9c46e831cc5a46a78158830c9243e58 173 Gene3D G3DSA:2.60.40.420 52 173 2.5E-43 T 20-04-2016 IPR008972 Cupredoxin APS56_RS08740 a9c46e831cc5a46a78158830c9243e58 173 SUPERFAMILY SSF49503 52 173 3.09E-37 T 20-04-2016 IPR008972 Cupredoxin APS56_RS08740 a9c46e831cc5a46a78158830c9243e58 173 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 57 173 1.1E-19 T 20-04-2016 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 Gene3D G3DSA:2.40.170.20 967 992 8.5E-36 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 Gene3D G3DSA:2.40.170.20 455 915 8.5E-36 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 Gene3D G3DSA:2.40.170.20 340 361 8.5E-36 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 Gene3D G3DSA:2.40.170.20 1050 1144 8.5E-36 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 PANTHER PTHR11532 581 627 5.0E-179 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 PANTHER PTHR11532 307 521 5.0E-179 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 PANTHER PTHR11532 644 1143 5.0E-179 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 PANTHER PTHR11532 17 285 5.0E-179 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 Gene3D G3DSA:2.60.40.1120 120 202 3.5E-12 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS03940 8a6428772526457596da22136a5c9711 1145 SUPERFAMILY SSF56935 958 1002 9.16E-75 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 SUPERFAMILY SSF56935 1052 1114 9.16E-75 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 SUPERFAMILY SSF56935 575 901 9.16E-75 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 SUPERFAMILY SSF56935 198 365 9.16E-75 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 SUPERFAMILY SSF56935 446 534 9.16E-75 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 PANTHER PTHR11532:SF51 581 627 5.0E-179 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 PANTHER PTHR11532:SF51 307 521 5.0E-179 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 PANTHER PTHR11532:SF51 644 1143 5.0E-179 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 PANTHER PTHR11532:SF51 17 285 5.0E-179 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 SUPERFAMILY SSF49464 119 199 2.22E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS03940 8a6428772526457596da22136a5c9711 1145 Pfam PF13715 CarboxypepD_reg-like domain 120 201 2.3E-16 T 20-04-2016 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 Pfam PF07715 TonB-dependent Receptor Plug Domain 211 340 2.8E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 119 1145 2.3E-184 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 316 346 8.4E-15 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS03940 8a6428772526457596da22136a5c9711 1145 Gene3D G3DSA:2.170.130.10 203 339 2.9E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 SUPERFAMILY SSF102114 8 284 5.23E-67 T 20-04-2016 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 Pfam PF13353 4Fe-4S single cluster domain 23 125 7.4E-8 T 20-04-2016 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 23 34 - T 20-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 SMART SM00729 17 214 2.1E-4 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 PANTHER PTHR22960 7 287 6.1E-112 T 20-04-2016 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 Gene3D G3DSA:3.20.20.70 9 307 1.3E-70 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 Pfam PF06463 Molybdenum Cofactor Synthesis C 185 305 3.8E-33 T 20-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 Pfam PF04055 Radical SAM superfamily 22 179 4.4E-28 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS03795 c90cec67cbc2e68e88a64fa8cd727486 335 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 8 335 8.6E-101 T 20-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS13665 2607dad9dc5de83efcfbc61ef05017a4 258 PANTHER PTHR34383:SF1 8 258 1.3E-164 T 20-04-2016 APS56_RS13665 2607dad9dc5de83efcfbc61ef05017a4 258 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 4 227 4.0E-107 T 20-04-2016 IPR022488 Polyphosphate kinase-2-related APS56_RS13665 2607dad9dc5de83efcfbc61ef05017a4 258 PANTHER PTHR34383 8 258 1.3E-164 T 20-04-2016 APS56_RS13665 2607dad9dc5de83efcfbc61ef05017a4 258 Gene3D G3DSA:3.40.50.300 5 236 1.7E-106 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13665 2607dad9dc5de83efcfbc61ef05017a4 258 PIRSF PIRSF028756 1 258 1.8E-126 T 20-04-2016 IPR016898 Polyphosphate kinase 2 APS56_RS13665 2607dad9dc5de83efcfbc61ef05017a4 258 SUPERFAMILY SSF52540 34 223 7.21E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13665 2607dad9dc5de83efcfbc61ef05017a4 258 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 4 229 2.7E-115 T 20-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 APS56_RS00235 b0dc47aabae677dffc1a1749cb380856 192 Gene3D G3DSA:2.40.128.110 31 192 4.3E-34 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS00235 b0dc47aabae677dffc1a1749cb380856 192 SUPERFAMILY SSF101874 31 192 2.75E-32 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS00235 b0dc47aabae677dffc1a1749cb380856 192 PANTHER PTHR34406 1 148 8.2E-13 T 20-04-2016 APS56_RS00235 b0dc47aabae677dffc1a1749cb380856 192 SMART SM00867 28 191 3.2E-18 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS00235 b0dc47aabae677dffc1a1749cb380856 192 PANTHER PTHR34406:SF1 1 148 8.2E-13 T 20-04-2016 APS56_RS00235 b0dc47aabae677dffc1a1749cb380856 192 Pfam PF04264 YceI-like domain 31 192 2.2E-26 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS10690 829c6f8a28d59396a25d1b7a1300802e 139 Pfam PF04519 Polymer-forming cytoskeletal 19 114 3.4E-24 T 20-04-2016 IPR007607 Protein of unknown function DUF583 APS56_RS10690 829c6f8a28d59396a25d1b7a1300802e 139 PANTHER PTHR35024 3 110 1.8E-20 T 20-04-2016 APS56_RS10690 829c6f8a28d59396a25d1b7a1300802e 139 PANTHER PTHR35024:SF2 3 110 1.8E-20 T 20-04-2016 APS56_RS02990 3eb1c0371df0584aefa26193aaac2560 451 Pfam PF00884 Sulfatase 17 344 4.7E-79 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS02990 3eb1c0371df0584aefa26193aaac2560 451 PANTHER PTHR10342 1 438 1.0E-159 T 20-04-2016 APS56_RS02990 3eb1c0371df0584aefa26193aaac2560 451 PANTHER PTHR10342:SF229 1 438 1.0E-159 T 20-04-2016 APS56_RS02990 3eb1c0371df0584aefa26193aaac2560 451 Gene3D G3DSA:3.40.720.10 15 358 9.4E-118 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS02990 3eb1c0371df0584aefa26193aaac2560 451 Gene3D G3DSA:3.30.1120.10 359 436 3.4E-18 T 20-04-2016 APS56_RS02990 3eb1c0371df0584aefa26193aaac2560 451 SUPERFAMILY SSF53649 16 437 5.52E-132 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS02990 3eb1c0371df0584aefa26193aaac2560 451 ProSitePatterns PS00523 Sulfatases signature 1. 63 75 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Gene3D G3DSA:1.10.10.60 1310 1359 5.4E-16 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Gene3D G3DSA:3.30.565.10 878 1066 2.7E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PANTHER PTHR24423 771 1265 1.0E-106 T 20-04-2016 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PANTHER PTHR24423 381 448 1.0E-106 T 20-04-2016 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PANTHER PTHR24423 12 112 1.0E-106 T 20-04-2016 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 940 1062 7.2E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Pfam PF00072 Response regulator receiver domain 1113 1221 4.7E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PANTHER PTHR24423:SF487 771 1265 1.0E-106 T 20-04-2016 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PANTHER PTHR24423:SF487 381 448 1.0E-106 T 20-04-2016 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PANTHER PTHR24423:SF487 12 112 1.0E-106 T 20-04-2016 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SUPERFAMILY SSF52172 1108 1235 2.56E-33 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1310 1352 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SUPERFAMILY SSF47384 820 894 8.24E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 989 1003 2.9E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1024 1042 2.9E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1007 1017 2.9E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1048 1061 2.9E-9 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Gene3D G3DSA:1.10.10.60 1251 1309 3.0E-6 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Pfam PF07495 Y_Y_Y domain 712 773 4.5E-16 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Gene3D G3DSA:3.40.50.2300 1108 1237 1.8E-37 T 20-04-2016 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SMART SM00342 1273 1356 2.5E-22 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SUPERFAMILY SSF46689 1310 1358 1.12E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SUPERFAMILY SSF55874 882 1065 4.45E-34 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SUPERFAMILY SSF63829 408 638 1.11E-11 T 20-04-2016 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Pfam PF12833 Helix-turn-helix domain 1279 1357 2.1E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Gene3D G3DSA:2.120.10.30 489 604 6.3E-8 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SMART SM00387 939 1064 3.0E-30 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Gene3D G3DSA:1.10.287.130 823 877 2.5E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SMART SM00388 828 893 6.7E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Pfam PF07494 Two component regulator propeller 89 110 5.2E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Pfam PF07494 Two component regulator propeller 526 549 3.2E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Pfam PF07494 Two component regulator propeller 316 337 0.011 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 SMART SM00448 1111 1223 5.2E-34 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15525 dd27b3c180552bc30b00e8d92c5ee996 1362 Pfam PF00512 His Kinase A (phospho-acceptor) domain 832 892 1.8E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03910 bcf9b0630d03c29a8cfe8321ca8c3c09 190 SUPERFAMILY SSF52972 1 188 2.62E-58 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APS56_RS03910 bcf9b0630d03c29a8cfe8321ca8c3c09 190 PANTHER PTHR11067 1 190 4.1E-61 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APS56_RS03910 bcf9b0630d03c29a8cfe8321ca8c3c09 190 PANTHER PTHR11067:SF9 1 190 4.1E-61 T 20-04-2016 APS56_RS03910 bcf9b0630d03c29a8cfe8321ca8c3c09 190 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 1 190 41.131 T 20-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APS56_RS03910 bcf9b0630d03c29a8cfe8321ca8c3c09 190 Gene3D G3DSA:3.90.950.10 1 189 4.4E-64 T 20-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APS56_RS03910 bcf9b0630d03c29a8cfe8321ca8c3c09 190 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 188 2.0E-51 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APS56_RS03910 bcf9b0630d03c29a8cfe8321ca8c3c09 190 Pfam PF01725 Ham1 family 3 186 3.5E-52 T 20-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 SUPERFAMILY SSF48179 211 310 1.38E-27 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 PIRSF PIRSF000124 4 459 2.9E-133 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 PANTHER PTHR11374 1 459 1.1E-299 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 Gene3D G3DSA:1.20.5.100 214 239 5.5E-14 T 20-04-2016 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 211 305 2.1E-30 T 20-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 SUPERFAMILY SSF51735 4 202 4.77E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 444 1.0E-35 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 PIRSF PIRSF500133 1 459 5.1E-230 T 20-04-2016 IPR028356 UDP-glucose 6-dehydrogenase, eukaryotic type GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 Gene3D G3DSA:3.40.50.720 242 459 1.1E-88 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 SMART SM00984 329 444 7.0E-44 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 440 5.1E-106 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 Gene3D G3DSA:3.40.50.720 4 213 7.3E-77 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 193 2.0E-59 T 20-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 PANTHER PTHR11374:SF3 1 459 1.1E-299 T 20-04-2016 APS56_RS02125 d1abd4f69f5c3b46e33ad19e5a290349 459 SUPERFAMILY SSF52413 316 455 2.75E-34 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS05340 4dc60241339efdf4b44ff9ec83d09487 341 Gene3D G3DSA:3.90.550.10 5 217 1.0E-56 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05340 4dc60241339efdf4b44ff9ec83d09487 341 Pfam PF00535 Glycosyl transferase family 2 8 161 1.0E-33 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS05340 4dc60241339efdf4b44ff9ec83d09487 341 SUPERFAMILY SSF53448 5 218 1.69E-57 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05340 4dc60241339efdf4b44ff9ec83d09487 341 PANTHER PTHR22916 1 263 7.3E-53 T 20-04-2016 APS56_RS05340 4dc60241339efdf4b44ff9ec83d09487 341 PANTHER PTHR22916:SF28 1 263 7.3E-53 T 20-04-2016 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 Gene3D G3DSA:2.60.40.1120 28 108 8.6E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 Gene3D G3DSA:2.40.170.20 257 784 6.7E-91 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 SUPERFAMILY SSF49464 27 112 1.1E-17 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 Pfam PF13715 CarboxypepD_reg-like domain 28 114 5.9E-20 T 20-04-2016 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 PANTHER PTHR32552:SF10 130 787 2.6E-69 T 20-04-2016 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 PANTHER PTHR32552:SF10 103 114 2.6E-69 T 20-04-2016 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 PANTHER PTHR32552 130 787 2.6E-69 T 20-04-2016 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 PANTHER PTHR32552 103 114 2.6E-69 T 20-04-2016 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 Gene3D G3DSA:2.170.130.10 109 247 3.0E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 SUPERFAMILY SSF56935 102 785 1.47E-86 T 20-04-2016 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 141 770 2.3E-68 T 20-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APS56_RS07665 3571e11259cbc2778aa56c45ca1c8eec 788 Pfam PF07715 TonB-dependent Receptor Plug Domain 138 227 8.7E-9 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS16390 dc7b0cc1e8c2bb071780eaf9fedadce1 295 Pfam PF16119 Domain of unknown function (DUF4835) 19 293 1.5E-108 T 20-04-2016 IPR032274 Protein of unknown function DUF4835 APS56_RS08995 42cb3f8a2caa84496c11554a9109d089 216 Pfam PF01522 Polysaccharide deacetylase 24 148 1.1E-25 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APS56_RS08995 42cb3f8a2caa84496c11554a9109d089 216 Gene3D G3DSA:3.20.20.370 7 215 2.0E-55 T 20-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APS56_RS08995 42cb3f8a2caa84496c11554a9109d089 216 PANTHER PTHR10587 19 215 2.0E-35 T 20-04-2016 APS56_RS08995 42cb3f8a2caa84496c11554a9109d089 216 SUPERFAMILY SSF88713 10 214 4.94E-52 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 Gene3D G3DSA:1.10.760.10 632 743 5.4E-18 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 SUPERFAMILY SSF46626 627 721 3.58E-16 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 631 718 5.5E-8 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 SUPERFAMILY SSF63829 320 372 5.89E-7 T 20-04-2016 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 SUPERFAMILY SSF63829 47 226 5.89E-7 T 20-04-2016 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 PANTHER PTHR14209:SF5 39 143 1.3E-16 T 20-04-2016 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 PANTHER PTHR14209 39 143 1.3E-16 T 20-04-2016 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 SUPERFAMILY SSF48371 425 619 4.22E-5 T 20-04-2016 IPR016024 Armadillo-type fold GO:0005488 APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 Gene3D G3DSA:2.120.10.30 137 185 1.0E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 Gene3D G3DSA:2.120.10.30 22 78 1.0E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS15515 60257be150d686a0fd7ef79f8851aa0e 759 Gene3D G3DSA:2.120.10.30 269 374 5.9E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS03700 c7729780228175da55d84ee7e244b4fb 423 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 214 230 - T 20-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APS56_RS03700 c7729780228175da55d84ee7e244b4fb 423 Pfam PF00464 Serine hydroxymethyltransferase 2 392 1.3E-169 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APS56_RS03700 c7729780228175da55d84ee7e244b4fb 423 SUPERFAMILY SSF53383 2 420 3.63E-168 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS03700 c7729780228175da55d84ee7e244b4fb 423 PANTHER PTHR11680 4 416 1.9E-229 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APS56_RS03700 c7729780228175da55d84ee7e244b4fb 423 Gene3D G3DSA:3.90.1150.10 291 420 7.5E-51 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS03700 c7729780228175da55d84ee7e244b4fb 423 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 1 423 49.443 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APS56_RS03700 c7729780228175da55d84ee7e244b4fb 423 PIRSF PIRSF000412 1 419 1.5E-157 T 20-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APS56_RS03700 c7729780228175da55d84ee7e244b4fb 423 Gene3D G3DSA:3.40.640.10 29 290 6.2E-96 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS14125 e677ed0dd02f8a20a423f1660e8a7b6e 123 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 13 111 1.6E-33 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APS56_RS14125 e677ed0dd02f8a20a423f1660e8a7b6e 123 SUPERFAMILY SSF81301 8 117 1.34E-34 T 20-04-2016 APS56_RS14125 e677ed0dd02f8a20a423f1660e8a7b6e 123 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 8 112 22.67 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APS56_RS14125 e677ed0dd02f8a20a423f1660e8a7b6e 123 PANTHER PTHR21043 4 114 1.7E-29 T 20-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APS56_RS14125 e677ed0dd02f8a20a423f1660e8a7b6e 123 Gene3D G3DSA:3.30.460.10 8 114 2.5E-33 T 20-04-2016 APS56_RS14125 e677ed0dd02f8a20a423f1660e8a7b6e 123 Pfam PF02410 Ribosomal silencing factor during starvation 15 111 3.2E-26 T 20-04-2016 APS56_RS08650 02c0f49f7710802c1b69d44079396969 192 Pfam PF01420 Type I restriction modification DNA specificity domain 2 170 2.5E-15 T 20-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APS56_RS08650 02c0f49f7710802c1b69d44079396969 192 PANTHER PTHR30408 83 171 2.8E-13 T 20-04-2016 APS56_RS08650 02c0f49f7710802c1b69d44079396969 192 SUPERFAMILY SSF116734 2 185 1.32E-31 T 20-04-2016 APS56_RS08650 02c0f49f7710802c1b69d44079396969 192 PANTHER PTHR30408:SF7 83 171 2.8E-13 T 20-04-2016 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SMART SM00028 202 235 32.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SMART SM00028 282 315 320.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SMART SM00028 242 275 25.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SMART SM00028 162 195 2.3 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SMART SM00028 127 160 22.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SMART SM00028 85 119 94.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 PANTHER PTHR34220 349 597 3.6E-45 T 20-04-2016 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 Pfam PF06580 Histidine kinase 395 474 8.8E-22 T 20-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SUPERFAMILY SSF48452 166 317 1.04E-16 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 Pfam PF13181 Tetratricopeptide repeat 202 231 0.098 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 Pfam PF13181 Tetratricopeptide repeat 166 192 0.0016 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 Pfam PF13181 Tetratricopeptide repeat 243 273 0.13 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 Gene3D G3DSA:3.30.565.10 444 594 5.2E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 Gene3D G3DSA:1.25.40.10 100 178 1.7E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 Gene3D G3DSA:1.25.40.10 216 308 5.3E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SUPERFAMILY SSF55874 476 593 7.86E-10 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 SUPERFAMILY SSF48452 97 191 3.59E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15930 b3fd1e4e255e67b56ebf5c171c2db52d 597 Gene3D G3DSA:1.25.40.10 179 215 7.6E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08280 e2b8fd4beb07f3fbd0230d48c2c56c8a 364 PANTHER PTHR19353:SF14 15 361 1.2E-65 T 20-04-2016 APS56_RS08280 e2b8fd4beb07f3fbd0230d48c2c56c8a 364 PIRSF PIRSF015921 2 363 4.8E-76 T 20-04-2016 IPR012171 Fatty acid desaturase GO:0006629|GO:0016021|GO:0016491 APS56_RS08280 e2b8fd4beb07f3fbd0230d48c2c56c8a 364 PANTHER PTHR19353 15 361 1.2E-65 T 20-04-2016 APS56_RS08280 e2b8fd4beb07f3fbd0230d48c2c56c8a 364 Pfam PF00487 Fatty acid desaturase 65 340 1.8E-39 T 20-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 APS56_RS09940 a02af5206848f37ec0a977088d8c3d33 560 Gene3D G3DSA:1.25.40.10 409 498 2.3E-33 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09940 a02af5206848f37ec0a977088d8c3d33 560 Gene3D G3DSA:1.25.40.10 347 361 2.3E-33 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09940 a02af5206848f37ec0a977088d8c3d33 560 Gene3D G3DSA:1.25.40.10 226 314 2.3E-33 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09940 a02af5206848f37ec0a977088d8c3d33 560 Pfam PF07980 SusD family 332 557 4.6E-29 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS09940 a02af5206848f37ec0a977088d8c3d33 560 SUPERFAMILY SSF48452 31 557 4.3E-78 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09940 a02af5206848f37ec0a977088d8c3d33 560 Pfam PF14322 Starch-binding associating with outer membrane 79 244 1.5E-11 T 20-04-2016 APS56_RS09575 f04a0ff38a73d9c800934e6f27ff1919 196 SMART SM00530 9 64 7.3E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS09575 f04a0ff38a73d9c800934e6f27ff1919 196 Gene3D G3DSA:1.10.260.40 5 70 1.1E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS09575 f04a0ff38a73d9c800934e6f27ff1919 196 Pfam PF09685 Domain of unknown function (DUF4870) 72 195 1.5E-20 T 20-04-2016 IPR019109 Protein of unknown function DUF4870 APS56_RS09575 f04a0ff38a73d9c800934e6f27ff1919 196 SUPERFAMILY SSF47413 5 67 8.04E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS09575 f04a0ff38a73d9c800934e6f27ff1919 196 Pfam PF01381 Helix-turn-helix 10 62 7.5E-15 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS15300 9f9b20bb53b766467c0ec0a6a6e7b20c 264 PANTHER PTHR24220 11 246 3.6E-70 T 20-04-2016 APS56_RS15300 9f9b20bb53b766467c0ec0a6a6e7b20c 264 SMART SM00382 38 228 1.4E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS15300 9f9b20bb53b766467c0ec0a6a6e7b20c 264 Pfam PF00005 ABC transporter 30 177 2.4E-25 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS15300 9f9b20bb53b766467c0ec0a6a6e7b20c 264 Gene3D G3DSA:3.40.50.300 7 238 1.2E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15300 9f9b20bb53b766467c0ec0a6a6e7b20c 264 PANTHER PTHR24220:SF73 11 246 3.6E-70 T 20-04-2016 APS56_RS15300 9f9b20bb53b766467c0ec0a6a6e7b20c 264 SUPERFAMILY SSF52540 9 229 3.35E-49 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10965 f4c98923b296a348dc9e4d1db1f2cc48 144 PIRSF PIRSF005384 1 143 1.3E-52 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APS56_RS10965 f4c98923b296a348dc9e4d1db1f2cc48 144 Gene3D G3DSA:3.40.1400.10 1 140 8.5E-56 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APS56_RS10965 f4c98923b296a348dc9e4d1db1f2cc48 144 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 3 140 3.2E-42 T 20-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 APS56_RS10965 f4c98923b296a348dc9e4d1db1f2cc48 144 SUPERFAMILY SSF89623 1 140 4.45E-51 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APS56_RS10965 f4c98923b296a348dc9e4d1db1f2cc48 144 Pfam PF02502 Ribose/Galactose Isomerase 3 140 4.9E-53 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APS56_RS10965 f4c98923b296a348dc9e4d1db1f2cc48 144 PANTHER PTHR30345 1 140 8.2E-56 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APS56_RS10965 f4c98923b296a348dc9e4d1db1f2cc48 144 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 140 4.3E-46 T 20-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 PIRSF PIRSF037215 2 412 5.9E-190 T 20-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 SUPERFAMILY SSF53187 326 410 3.41E-81 T 20-04-2016 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 SUPERFAMILY SSF53187 5 214 3.41E-81 T 20-04-2016 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 SUPERFAMILY SSF55031 213 323 1.26E-37 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 PANTHER PTHR11014 135 413 5.6E-194 T 20-04-2016 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 PANTHER PTHR11014 1 94 5.6E-194 T 20-04-2016 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 Gene3D G3DSA:3.30.70.360 214 323 9.0E-46 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 Hamap MF_00550 Peptidase T [pepT]. 4 408 57.983 T 20-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 TIGRFAM TIGR01882 peptidase-T: peptidase T 5 410 3.8E-184 T 20-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 Pfam PF07687 Peptidase dimerisation domain 210 311 1.7E-11 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 PANTHER PTHR11014:SF3 135 413 5.6E-194 T 20-04-2016 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 PANTHER PTHR11014:SF3 1 94 5.6E-194 T 20-04-2016 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 Gene3D G3DSA:3.40.630.10 326 411 6.9E-124 T 20-04-2016 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 Gene3D G3DSA:3.40.630.10 1 213 6.9E-124 T 20-04-2016 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 Pfam PF01546 Peptidase family M20/M25/M40 143 405 4.1E-12 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APS56_RS04545 7ff627ef56de6940d14d50dfcd6954d0 413 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 181 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APS56_RS02230 f40c6ce0b38e61dae51c721cc524e2fa 205 PANTHER PTHR30576 1 188 1.1E-75 T 20-04-2016 APS56_RS02230 f40c6ce0b38e61dae51c721cc524e2fa 205 Pfam PF02397 Bacterial sugar transferase 6 180 7.0E-56 T 20-04-2016 IPR003362 Bacterial sugar transferase APS56_RS08525 08002025199695bc2070293d8fea52bb 258 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 5 258 33.712 T 20-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APS56_RS08525 08002025199695bc2070293d8fea52bb 258 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 7 243 1.0E-64 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APS56_RS08525 08002025199695bc2070293d8fea52bb 258 PANTHER PTHR30457 4 257 8.9E-89 T 20-04-2016 APS56_RS08525 08002025199695bc2070293d8fea52bb 258 Gene3D G3DSA:3.40.1210.10 5 254 7.2E-87 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APS56_RS08525 08002025199695bc2070293d8fea52bb 258 SUPERFAMILY SSF64167 6 256 2.62E-77 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APS56_RS08525 08002025199695bc2070293d8fea52bb 258 Pfam PF01975 Survival protein SurE 7 193 1.3E-57 T 20-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APS56_RS11315 34b837ab5d619d5019bc58e88d3aa731 213 PANTHER PTHR12907 1 213 5.2E-37 T 20-04-2016 APS56_RS11315 34b837ab5d619d5019bc58e88d3aa731 213 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 118 210 1.9E-22 T 20-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APS56_RS11315 34b837ab5d619d5019bc58e88d3aa731 213 PANTHER PTHR12907:SF14 1 213 5.2E-37 T 20-04-2016 APS56_RS11315 34b837ab5d619d5019bc58e88d3aa731 213 SMART SM00702 26 211 6.8E-21 T 20-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 SUPERFAMILY SSF109998 252 437 1.0E-25 T 20-04-2016 IPR027304 Trigger factor/SurA domain APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 PIRSF PIRSF003095 1 438 8.0E-47 T 20-04-2016 IPR005215 Trigger factor GO:0015031 APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 Gene3D G3DSA:1.10.3120.10 197 373 4.8E-21 T 20-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 268 397 3.3E-7 T 20-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 SUPERFAMILY SSF102735 1 120 1.57E-32 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 Pfam PF05697 Bacterial trigger factor protein (TF) 1 146 7.7E-37 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 Gene3D G3DSA:3.30.70.1050 1 119 6.9E-33 T 20-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 TIGRFAM TIGR00115 tig: trigger factor 12 417 9.7E-65 T 20-04-2016 IPR005215 Trigger factor GO:0015031 APS56_RS13165 3154d7e49b080f45afac5c71234a8dc6 442 PANTHER PTHR30560 1 437 6.6E-29 T 20-04-2016 APS56_RS10435 26a3b77cd5ba258a4206535c7143ad0c 182 PANTHER PTHR40255 2 177 1.2E-41 T 20-04-2016 APS56_RS10435 26a3b77cd5ba258a4206535c7143ad0c 182 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 147 2.3E-47 T 20-04-2016 IPR005265 Uncharacterised protein family UPF0093 APS56_RS10435 26a3b77cd5ba258a4206535c7143ad0c 182 PIRSF PIRSF004638 1 150 2.3E-44 T 20-04-2016 IPR005265 Uncharacterised protein family UPF0093 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 Pfam PF14310 Fibronectin type III-like domain 782 852 8.9E-20 T 20-04-2016 IPR026891 Fibronectin type III-like domain APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 63 332 1.2E-54 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 PRINTS PR00133 Glycosyl hydrolase family 3 signature 255 273 1.9E-11 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 PRINTS PR00133 Glycosyl hydrolase family 3 signature 89 108 1.9E-11 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 PRINTS PR00133 Glycosyl hydrolase family 3 signature 184 200 1.9E-11 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 373 745 3.9E-63 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 SMART SM00758 460 596 7.1E-17 T 20-04-2016 IPR011658 PA14 domain APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 SUPERFAMILY SSF56988 462 623 1.83E-34 T 20-04-2016 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 Gene3D G3DSA:3.40.50.1700 594 748 1.3E-77 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 Gene3D G3DSA:3.40.50.1700 359 444 1.3E-77 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 PANTHER PTHR30620 8 436 0.0 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 PANTHER PTHR30620 579 864 0.0 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 SMART SM01217 782 852 5.0E-28 T 20-04-2016 IPR026891 Fibronectin type III-like domain APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 SUPERFAMILY SSF51445 26 372 6.95E-103 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 PANTHER PTHR30620:SF8 8 436 0.0 T 20-04-2016 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 PANTHER PTHR30620:SF8 579 864 0.0 T 20-04-2016 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 Gene3D G3DSA:3.20.20.300 26 342 2.3E-114 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 Pfam PF07691 PA14 domain 461 590 3.7E-20 T 20-04-2016 IPR011658 PA14 domain APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 SUPERFAMILY SSF52279 373 441 7.32E-59 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS03015 b036a0f76ed0a05980a49eb711d23a30 864 SUPERFAMILY SSF52279 594 748 7.32E-59 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS13780 d99b86f523345895d31b7ef55b7d82d4 233 PANTHER PTHR30625 26 229 6.7E-40 T 20-04-2016 APS56_RS13780 d99b86f523345895d31b7ef55b7d82d4 233 Pfam PF01618 MotA/TolQ/ExbB proton channel family 98 219 1.3E-26 T 20-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 Gene3D G3DSA:1.10.260.40 2 59 7.2E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 Gene3D G3DSA:2.60.120.10 60 184 2.8E-20 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 SUPERFAMILY SSF47413 3 71 5.36E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 Pfam PF07883 Cupin domain 131 184 8.8E-12 T 20-04-2016 IPR013096 Cupin 2, conserved barrel APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 PANTHER PTHR10245 8 183 9.4E-28 T 20-04-2016 APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 Pfam PF12844 Helix-turn-helix domain 9 70 6.3E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 SMART SM00530 11 66 2.0E-13 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 SUPERFAMILY SSF51182 59 185 3.99E-21 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS00330 3d617a274f0fcc4b5af420e2067aa0d3 191 PANTHER PTHR10245:SF49 8 183 9.4E-28 T 20-04-2016 APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 Gene3D G3DSA:3.20.20.70 6 272 1.7E-87 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 SMART SM00858 288 347 2.1E-6 T 20-04-2016 IPR013974 SAF domain APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 Pfam PF08666 SAF domain 296 347 3.6E-8 T 20-04-2016 IPR013974 SAF domain APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 Pfam PF03102 NeuB family 39 274 4.0E-66 T 20-04-2016 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 SUPERFAMILY SSF51569 6 280 6.11E-79 T 20-04-2016 APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 Gene3D G3DSA:3.90.1210.10 291 347 3.3E-20 T 20-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 PANTHER PTHR23416:SF62 5 282 2.5E-66 T 20-04-2016 APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 PANTHER PTHR23416 5 282 2.5E-66 T 20-04-2016 APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 TIGRFAM TIGR03569 NeuB_NnaB: N-acetylneuraminate synthase 20 341 4.1E-121 T 20-04-2016 IPR020007 N-acetylneuraminate synthase KEGG: 00520+2.5.1.101|KEGG: 00900+2.5.1.10|MetaCyc: PWY-5123|MetaCyc: PWY-6749|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7131|MetaCyc: PWY-7721|MetaCyc: PWY-7736 APS56_RS05280 ed732ca6e1b66cc779116df042b133c3 347 SUPERFAMILY SSF51269 280 347 8.24E-17 T 20-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal APS56_RS13705 c306a86d357290ec03bd894aea7286b6 705 Pfam PF16889 Heparinase II/III N-terminus 14 340 3.3E-70 T 20-04-2016 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 APS56_RS13705 c306a86d357290ec03bd894aea7286b6 705 PANTHER PTHR39210 5 669 6.0E-51 T 20-04-2016 APS56_RS13705 c306a86d357290ec03bd894aea7286b6 705 SUPERFAMILY SSF48230 112 339 1.37E-35 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS13705 c306a86d357290ec03bd894aea7286b6 705 Gene3D G3DSA:1.50.10.110 129 365 7.2E-35 T 20-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 APS56_RS13705 c306a86d357290ec03bd894aea7286b6 705 Pfam PF07940 Heparinase II/III-like protein 422 605 6.7E-28 T 20-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 Gene3D G3DSA:1.20.1260.10 3 157 2.3E-51 T 20-04-2016 IPR012347 Ferritin-related APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 SUPERFAMILY SSF47240 2 156 9.4E-39 T 20-04-2016 IPR009078 Ferritin-like superfamily APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 20-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 PANTHER PTHR30295 1 157 6.6E-49 T 20-04-2016 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 PIRSF PIRSF005900 1 159 3.6E-43 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 ProSitePatterns PS00819 Dps protein family signature 2. 64 78 - T 20-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 PANTHER PTHR30295:SF6 1 157 6.6E-49 T 20-04-2016 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 Pfam PF00210 Ferritin-like domain 18 157 2.3E-25 T 20-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 1.1E-13 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 133 151 1.1E-13 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APS56_RS07675 cebcd21b94244e785b61a36b64439504 159 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 1.1E-13 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APS56_RS10670 f8ab8d1e802ba9cda1918764b15bf5cd 166 Hamap MF_01398 ATP synthase subunit b [atpF]. 8 165 12.573 T 20-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APS56_RS10670 f8ab8d1e802ba9cda1918764b15bf5cd 166 Pfam PF00430 ATP synthase B/B' CF(0) 13 142 1.0E-31 T 20-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APS56_RS10670 f8ab8d1e802ba9cda1918764b15bf5cd 166 Gene3D G3DSA:1.20.5.620 68 128 1.1E-12 T 20-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APS56_RS10670 f8ab8d1e802ba9cda1918764b15bf5cd 166 PANTHER PTHR33445 7 162 1.1E-35 T 20-04-2016 APS56_RS10670 f8ab8d1e802ba9cda1918764b15bf5cd 166 SUPERFAMILY SSF81573 68 127 3.79E-10 T 20-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APS56_RS10670 f8ab8d1e802ba9cda1918764b15bf5cd 166 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 16 161 2.5E-31 T 20-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 APS56_RS04585 ed2773fb839d556cdb59b54e45724e40 799 Gene3D G3DSA:2.60.120.200 304 510 2.2E-23 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS04585 ed2773fb839d556cdb59b54e45724e40 799 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 373 505 8.1E-21 T 20-04-2016 APS56_RS04585 ed2773fb839d556cdb59b54e45724e40 799 SUPERFAMILY SSF49899 316 511 1.11E-24 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 510 37.428 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 SMART SM00851 19 133 2.3E-42 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 Gene3D G3DSA:3.40.140.20 235 352 1.0E-41 T 20-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 441 2.7E-101 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 PANTHER PTHR11692:SF2 5 510 1.9E-236 T 20-04-2016 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 SUPERFAMILY SSF53927 213 510 2.51E-109 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 SUPERFAMILY SSF52335 7 198 7.85E-60 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 PANTHER PTHR11692 5 510 1.9E-236 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 Gene3D G3DSA:3.40.50.1380 5 191 4.9E-68 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 SMART SM00798 138 442 6.4E-141 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 Gene3D G3DSA:3.40.140.20 357 500 1.0E-49 T 20-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 PIRSF PIRSF000414 1 510 4.1E-193 T 20-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APS56_RS08235 4f0c0f41f03d3963ece8d66a99c5cc11 510 Pfam PF02142 MGS-like domain 20 132 3.6E-21 T 20-04-2016 IPR011607 Methylglyoxal synthase-like domain APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 PRINTS PR00124 ATP synthase C subunit signature 23 38 7.6E-8 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 PRINTS PR00124 ATP synthase C subunit signature 40 62 7.6E-8 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 PRINTS PR00124 ATP synthase C subunit signature 2 21 7.6E-8 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 SUPERFAMILY SSF81333 2 60 4.97E-12 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 Gene3D G3DSA:1.20.20.10 5 60 2.9E-16 T 20-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 12 60 3.6E-15 T 20-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 Pfam PF00137 ATP synthase subunit C 5 59 1.2E-6 T 20-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 62 10.094 T 20-04-2016 APS56_RS10675 4c37011a99b25285aa5d9a6243f03201 62 ProSitePatterns PS00605 ATP synthase c subunit signature. 30 51 - T 20-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site APS56_RS13985 d87be5278ad8dde561065cfe81c30e1f 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 3.2E-13 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13985 d87be5278ad8dde561065cfe81c30e1f 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.1E-19 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13985 d87be5278ad8dde561065cfe81c30e1f 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 14.525 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13985 d87be5278ad8dde561065cfe81c30e1f 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 20-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13985 d87be5278ad8dde561065cfe81c30e1f 63 Gene3D G3DSA:1.10.287.310 1 62 1.5E-20 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13985 d87be5278ad8dde561065cfe81c30e1f 63 SUPERFAMILY SSF46561 1 62 1.57E-18 T 20-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15745 1f398df9110511ab598ab367b6dd097b 756 Pfam PF09822 ABC-type uncharacterized transport system 285 560 6.6E-31 T 20-04-2016 IPR019196 ABC-type uncharacterised transport system APS56_RS15745 1f398df9110511ab598ab367b6dd097b 756 Pfam PF12679 ABC-2 family transporter protein 7 194 2.7E-12 T 20-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APS56_RS15745 1f398df9110511ab598ab367b6dd097b 756 PANTHER PTHR30294 1 269 4.7E-16 T 20-04-2016 APS56_RS15745 1f398df9110511ab598ab367b6dd097b 756 PANTHER PTHR30294:SF5 1 269 4.7E-16 T 20-04-2016 APS56_RS16360 6fb2aecdff11899129939944685247a8 253 PRINTS PR01607 Apyrase family signature 124 147 1.9E-7 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APS56_RS16360 6fb2aecdff11899129939944685247a8 253 PRINTS PR01607 Apyrase family signature 189 208 1.9E-7 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APS56_RS16360 6fb2aecdff11899129939944685247a8 253 PANTHER PTHR11575:SF7 27 252 1.1E-20 T 20-04-2016 APS56_RS16360 6fb2aecdff11899129939944685247a8 253 PANTHER PTHR11575 27 252 1.1E-20 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APS56_RS16360 6fb2aecdff11899129939944685247a8 253 SUPERFAMILY SSF55816 61 252 7.59E-41 T 20-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APS56_RS16360 6fb2aecdff11899129939944685247a8 253 Pfam PF02872 5'-nucleotidase, C-terminal domain 79 215 9.0E-22 T 20-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APS56_RS16360 6fb2aecdff11899129939944685247a8 253 Gene3D G3DSA:3.90.780.10 78 250 6.6E-37 T 20-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 Gene3D G3DSA:3.30.300.10 255 415 2.7E-62 T 20-04-2016 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 Gene3D G3DSA:3.30.300.10 10 131 3.5E-45 T 20-04-2016 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 PANTHER PTHR11964 400 413 2.6E-209 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 PANTHER PTHR11964 3 379 2.6E-209 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 SUPERFAMILY SSF55973 112 243 3.69E-39 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 4 382 7.1E-152 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 Gene3D G3DSA:3.30.300.10 132 244 4.8E-34 T 20-04-2016 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 3 99 6.8E-41 T 20-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 PIRSF PIRSF000497 1 416 1.2E-161 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 Pfam PF02772 S-adenosylmethionine synthetase, central domain 113 242 2.6E-42 T 20-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 SUPERFAMILY SSF55973 2 109 1.18E-43 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 SUPERFAMILY SSF55973 244 415 8.24E-57 T 20-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 115 125 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 270 278 - T 20-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 1 415 49.823 T 20-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS08775 6fe60daf6f1c26cccac1c0a12cd3738b 417 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 244 378 3.0E-60 T 20-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APS56_RS07530 70b26f870538e6bf5bbfac0a22c40e0d 389 Gene3D G3DSA:1.20.1250.20 208 378 1.9E-5 T 20-04-2016 APS56_RS07530 70b26f870538e6bf5bbfac0a22c40e0d 389 Gene3D G3DSA:1.20.1250.20 6 186 1.8E-15 T 20-04-2016 APS56_RS07530 70b26f870538e6bf5bbfac0a22c40e0d 389 PANTHER PTHR23514 40 383 5.6E-14 T 20-04-2016 APS56_RS07530 70b26f870538e6bf5bbfac0a22c40e0d 389 Pfam PF07690 Major Facilitator Superfamily 10 339 7.4E-17 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS07530 70b26f870538e6bf5bbfac0a22c40e0d 389 SUPERFAMILY SSF103473 6 378 3.66E-36 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS09260 2cbb3b075e9112f7854193b35217ee96 149 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 146 41.907 T 20-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APS56_RS09260 2cbb3b075e9112f7854193b35217ee96 149 Gene3D G3DSA:3.40.140.10 3 143 7.5E-52 T 20-04-2016 APS56_RS09260 2cbb3b075e9112f7854193b35217ee96 149 PANTHER PTHR11079:SF72 7 146 1.3E-47 T 20-04-2016 APS56_RS09260 2cbb3b075e9112f7854193b35217ee96 149 Pfam PF14437 MafB19-like deaminase 7 144 2.0E-30 T 20-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 APS56_RS09260 2cbb3b075e9112f7854193b35217ee96 149 SUPERFAMILY SSF53927 4 146 9.2E-49 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APS56_RS09260 2cbb3b075e9112f7854193b35217ee96 149 PANTHER PTHR11079 7 146 1.3E-47 T 20-04-2016 APS56_RS09260 2cbb3b075e9112f7854193b35217ee96 149 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APS56_RS15165 0b894c615c06364132475970eb145eb2 236 SUPERFAMILY SSF48008 99 229 4.45E-24 T 20-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APS56_RS15165 0b894c615c06364132475970eb145eb2 236 PANTHER PTHR11751 96 118 1.8E-21 T 20-04-2016 APS56_RS15165 0b894c615c06364132475970eb145eb2 236 PANTHER PTHR11751 18 80 1.8E-21 T 20-04-2016 APS56_RS15165 0b894c615c06364132475970eb145eb2 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 2.29E-9 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS15165 0b894c615c06364132475970eb145eb2 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 2.29E-9 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS15165 0b894c615c06364132475970eb145eb2 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 1.8E-19 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS15165 0b894c615c06364132475970eb145eb2 236 SMART SM00895 102 225 1.4E-15 T 20-04-2016 IPR011711 GntR, C-terminal APS56_RS15165 0b894c615c06364132475970eb145eb2 236 SMART SM00345 18 77 3.2E-19 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS15165 0b894c615c06364132475970eb145eb2 236 Gene3D G3DSA:1.10.10.10 10 79 1.0E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS15165 0b894c615c06364132475970eb145eb2 236 Pfam PF07729 FCD domain 103 224 8.7E-22 T 20-04-2016 IPR011711 GntR, C-terminal APS56_RS15165 0b894c615c06364132475970eb145eb2 236 Gene3D G3DSA:1.20.120.530 99 224 6.2E-24 T 20-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APS56_RS15165 0b894c615c06364132475970eb145eb2 236 SUPERFAMILY SSF46785 9 81 6.98E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06120 57165b868f483ed5a63bf19f431b7c4c 273 Gene3D G3DSA:3.40.50.1820 18 266 8.8E-62 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06120 57165b868f483ed5a63bf19f431b7c4c 273 PANTHER PTHR10907 21 179 9.7E-29 T 20-04-2016 APS56_RS06120 57165b868f483ed5a63bf19f431b7c4c 273 Pfam PF00756 Putative esterase 29 257 3.1E-34 T 20-04-2016 IPR000801 Putative esterase APS56_RS06120 57165b868f483ed5a63bf19f431b7c4c 273 SUPERFAMILY SSF53474 15 266 3.32E-45 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06120 57165b868f483ed5a63bf19f431b7c4c 273 PANTHER PTHR10907:SF33 21 179 9.7E-29 T 20-04-2016 APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 20-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 Pfam PF14572 Phosphoribosyl synthetase-associated domain 205 311 1.2E-23 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 SUPERFAMILY SSF53271 72 304 2.62E-57 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 9 311 1.1E-104 T 20-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 PANTHER PTHR10210 1 309 8.9E-144 T 20-04-2016 APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 9 123 2.5E-40 T 20-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 SMART SM01400 8 123 3.3E-63 T 20-04-2016 APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 Gene3D G3DSA:3.40.50.2020 162 282 1.2E-44 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS09615 7831508f412c4de09014ab75839c3dfd 313 Gene3D G3DSA:3.40.50.2020 7 161 2.3E-63 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS08315 26b725dff2250c109e847f659673072d 594 SUPERFAMILY SSF55874 418 593 1.2E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS08315 26b725dff2250c109e847f659673072d 594 PANTHER PTHR24423:SF518 3 20 6.1E-65 T 20-04-2016 APS56_RS08315 26b725dff2250c109e847f659673072d 594 PANTHER PTHR24423:SF518 210 593 6.1E-65 T 20-04-2016 APS56_RS08315 26b725dff2250c109e847f659673072d 594 Pfam PF00512 His Kinase A (phospho-acceptor) domain 362 426 4.3E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS08315 26b725dff2250c109e847f659673072d 594 Pfam PF08447 PAS fold 251 332 1.1E-9 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 APS56_RS08315 26b725dff2250c109e847f659673072d 594 SUPERFAMILY SSF55785 236 340 5.44E-10 T 20-04-2016 IPR000014 PAS domain APS56_RS08315 26b725dff2250c109e847f659673072d 594 Gene3D G3DSA:1.10.287.130 356 414 7.6E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS08315 26b725dff2250c109e847f659673072d 594 SUPERFAMILY SSF47384 348 427 5.1E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS08315 26b725dff2250c109e847f659673072d 594 PANTHER PTHR24423 3 20 6.1E-65 T 20-04-2016 APS56_RS08315 26b725dff2250c109e847f659673072d 594 PANTHER PTHR24423 210 593 6.1E-65 T 20-04-2016 APS56_RS08315 26b725dff2250c109e847f659673072d 594 Gene3D G3DSA:3.30.450.20 208 355 8.4E-16 T 20-04-2016 APS56_RS08315 26b725dff2250c109e847f659673072d 594 SMART SM00387 470 594 2.5E-22 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS08315 26b725dff2250c109e847f659673072d 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 3.8E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS08315 26b725dff2250c109e847f659673072d 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 579 592 3.8E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS08315 26b725dff2250c109e847f659673072d 594 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 573 3.8E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS08315 26b725dff2250c109e847f659673072d 594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 593 1.4E-17 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS08315 26b725dff2250c109e847f659673072d 594 Pfam PF05227 CHASE3 domain 41 175 7.7E-33 T 20-04-2016 IPR007891 CHASE3 APS56_RS08315 26b725dff2250c109e847f659673072d 594 SMART SM00388 361 429 7.0E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS08315 26b725dff2250c109e847f659673072d 594 Gene3D G3DSA:3.30.565.10 415 593 5.8E-33 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS02095 f018aff72b797281939573aee2eb86d4 249 Gene3D G3DSA:3.20.20.140 18 228 6.5E-7 T 20-04-2016 APS56_RS02095 f018aff72b797281939573aee2eb86d4 249 PIRSF PIRSF016557 18 244 8.1E-46 T 20-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 APS56_RS02095 f018aff72b797281939573aee2eb86d4 249 PANTHER PTHR39181 19 225 1.3E-50 T 20-04-2016 APS56_RS02095 f018aff72b797281939573aee2eb86d4 249 PANTHER PTHR39181:SF1 19 225 1.3E-50 T 20-04-2016 APS56_RS02095 f018aff72b797281939573aee2eb86d4 249 SUPERFAMILY SSF89550 18 226 4.32E-18 T 20-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APS56_RS00150 b20c8cef8076519ea531ce9429e8205c 328 SUPERFAMILY SSF53448 2 261 2.44E-50 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS00150 b20c8cef8076519ea531ce9429e8205c 328 PANTHER PTHR22916 2 137 3.1E-45 T 20-04-2016 APS56_RS00150 b20c8cef8076519ea531ce9429e8205c 328 Pfam PF00535 Glycosyl transferase family 2 5 178 1.5E-18 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS00150 b20c8cef8076519ea531ce9429e8205c 328 PANTHER PTHR22916:SF26 158 250 3.1E-45 T 20-04-2016 APS56_RS00150 b20c8cef8076519ea531ce9429e8205c 328 PANTHER PTHR22916 158 250 3.1E-45 T 20-04-2016 APS56_RS00150 b20c8cef8076519ea531ce9429e8205c 328 Gene3D G3DSA:3.90.550.10 2 245 1.6E-39 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS00150 b20c8cef8076519ea531ce9429e8205c 328 PANTHER PTHR22916:SF26 2 137 3.1E-45 T 20-04-2016 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 SUPERFAMILY SSF63999 5 121 1.57E-26 T 20-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 Gene3D G3DSA:2.60.120.320 132 196 1.9E-8 T 20-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 8 195 2.9E-39 T 20-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 SMART SM00983 131 195 2.8E-9 T 20-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 Gene3D G3DSA:3.40.50.10240 5 119 6.8E-23 T 20-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 SUPERFAMILY SSF63862 135 196 7.98E-9 T 20-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 137 192 3.2E-10 T 20-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 PANTHER PTHR41299:SF1 5 198 1.5E-15 T 20-04-2016 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 23 115 2.7E-17 T 20-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 APS56_RS00710 73bf3cfe9d7740c222955d30645d2fa0 201 PANTHER PTHR41299 5 198 1.5E-15 T 20-04-2016 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 SUPERFAMILY SSF63411 257 468 1.3E-6 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 SUPERFAMILY SSF63411 754 931 9.67E-18 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 65 88 - T 20-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 PANTHER PTHR11851 10 914 2.9E-112 T 20-04-2016 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 Pfam PF00675 Insulinase (Peptidase family M16) 57 185 3.9E-22 T 20-04-2016 IPR011765 Peptidase M16, N-terminal APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 Gene3D G3DSA:3.30.830.10 268 461 1.8E-6 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 Gene3D G3DSA:3.30.830.10 758 927 1.8E-12 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 Pfam PF05193 Peptidase M16 inactive domain 685 863 4.6E-16 T 20-04-2016 IPR007863 Peptidase M16, C-terminal APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 Pfam PF05193 Peptidase M16 inactive domain 205 384 2.5E-14 T 20-04-2016 IPR007863 Peptidase M16, C-terminal APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 SUPERFAMILY SSF63411 511 732 1.53E-19 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 PANTHER PTHR11851:SF144 10 914 2.9E-112 T 20-04-2016 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 Gene3D G3DSA:3.30.830.10 510 734 1.6E-17 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 Gene3D G3DSA:3.30.830.10 24 257 7.5E-47 T 20-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APS56_RS15760 6ef14d936d4b7c8cf8b4946643260d25 933 SUPERFAMILY SSF63411 32 250 3.3E-42 T 20-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APS56_RS03985 f679308a15244c84ef7e6b0719f770bc 246 Gene3D G3DSA:3.40.192.10 3 106 1.8E-34 T 20-04-2016 APS56_RS03985 f679308a15244c84ef7e6b0719f770bc 246 SUPERFAMILY SSF53223 2 101 1.04E-20 T 20-04-2016 APS56_RS03985 f679308a15244c84ef7e6b0719f770bc 246 PANTHER PTHR21089 4 243 5.7E-63 T 20-04-2016 APS56_RS03985 f679308a15244c84ef7e6b0719f770bc 246 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 8.5E-21 T 20-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS03985 f679308a15244c84ef7e6b0719f770bc 246 PANTHER PTHR21089:SF1 4 243 5.7E-63 T 20-04-2016 APS56_RS03985 f679308a15244c84ef7e6b0719f770bc 246 SUPERFAMILY SSF51735 102 243 1.36E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS03985 f679308a15244c84ef7e6b0719f770bc 246 Gene3D G3DSA:3.40.50.720 107 243 5.4E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 SUPERFAMILY SSF54814 204 280 5.95E-28 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 Gene3D G3DSA:2.40.50.140 132 201 1.1E-13 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 SUPERFAMILY SSF54814 283 343 5.67E-12 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 Gene3D G3DSA:3.30.300.20 202 280 5.7E-34 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 Gene3D G3DSA:3.30.1480.10 3 124 4.3E-28 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 343 2.7E-109 T 20-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 SUPERFAMILY SSF50249 134 202 1.39E-10 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 SUPERFAMILY SSF69705 3 128 2.09E-26 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 Gene3D G3DSA:3.30.300.20 282 345 5.0E-23 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 PANTHER PTHR22648 2 410 1.3E-100 T 20-04-2016 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 Pfam PF08529 NusA N-terminal domain 6 124 9.0E-26 T 20-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 3 408 26.437 T 20-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 Pfam PF13184 NusA-like KH domain 233 301 5.9E-26 T 20-04-2016 IPR025249 KH domain, NusA-like GO:0003723 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 SMART SM00322 307 384 4.9 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 SMART SM00322 233 306 0.79 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APS56_RS12885 dd56f96404919096a0fd2407b32afaf1 410 PANTHER PTHR22648:SF0 2 410 1.3E-100 T 20-04-2016 APS56_RS15510 331e07d3c36d4beef5d049eeba9b8794 83 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 82 14.587 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15510 331e07d3c36d4beef5d049eeba9b8794 83 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 81 6.1E-17 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15510 331e07d3c36d4beef5d049eeba9b8794 83 Pfam PF01649 Ribosomal protein S20 2 80 4.5E-25 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15510 331e07d3c36d4beef5d049eeba9b8794 83 PANTHER PTHR33398 1 83 1.6E-21 T 20-04-2016 APS56_RS15510 331e07d3c36d4beef5d049eeba9b8794 83 SUPERFAMILY SSF46992 5 83 8.63E-22 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15510 331e07d3c36d4beef5d049eeba9b8794 83 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 56 2.0E-6 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15510 331e07d3c36d4beef5d049eeba9b8794 83 Gene3D G3DSA:1.20.58.110 1 83 1.0E-23 T 20-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03285 84eb59afd48611acc354bea7e0e49bdb 160 Pfam PF01641 SelR domain 39 158 4.3E-49 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APS56_RS03285 84eb59afd48611acc354bea7e0e49bdb 160 Gene3D G3DSA:2.170.150.20 29 160 2.3E-55 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APS56_RS03285 84eb59afd48611acc354bea7e0e49bdb 160 PANTHER PTHR10173 17 159 1.5E-55 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APS56_RS03285 84eb59afd48611acc354bea7e0e49bdb 160 PANTHER PTHR10173:SF18 17 159 1.5E-55 T 20-04-2016 APS56_RS03285 84eb59afd48611acc354bea7e0e49bdb 160 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 35 159 2.7E-48 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APS56_RS03285 84eb59afd48611acc354bea7e0e49bdb 160 SUPERFAMILY SSF51316 34 159 4.71E-54 T 20-04-2016 IPR011057 Mss4-like APS56_RS10405 a9fd8e5d38dee18f2c1ef21961564c54 339 PANTHER PTHR30600 46 339 1.6E-64 T 20-04-2016 APS56_RS10405 a9fd8e5d38dee18f2c1ef21961564c54 339 Gene3D G3DSA:1.10.760.10 195 335 5.3E-37 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS10405 a9fd8e5d38dee18f2c1ef21961564c54 339 SUPERFAMILY SSF46626 180 331 1.07E-25 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS10405 a9fd8e5d38dee18f2c1ef21961564c54 339 PANTHER PTHR30600:SF7 46 339 1.6E-64 T 20-04-2016 APS56_RS10405 a9fd8e5d38dee18f2c1ef21961564c54 339 Gene3D G3DSA:1.10.760.10 49 194 5.4E-36 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS10405 a9fd8e5d38dee18f2c1ef21961564c54 339 PIRSF PIRSF000294 4 337 5.2E-70 T 20-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 APS56_RS10405 a9fd8e5d38dee18f2c1ef21961564c54 339 SUPERFAMILY SSF46626 43 189 3.98E-38 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS10405 a9fd8e5d38dee18f2c1ef21961564c54 339 Pfam PF03150 Di-haem cytochrome c peroxidase 57 201 6.6E-39 T 20-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 SUPERFAMILY SSF52540 190 505 8.78E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 193 397 1.8E-93 T 20-04-2016 IPR000523 Magnesium chelatase ChlI domain APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 PANTHER PTHR32039:SF7 1 506 2.0E-251 T 20-04-2016 IPR004482 Mg chelatase-related protein APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 5 502 1.9E-196 T 20-04-2016 IPR004482 Mg chelatase-related protein APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 141 9.9E-44 T 20-04-2016 APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 PANTHER PTHR32039 1 506 2.0E-251 T 20-04-2016 APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 SUPERFAMILY SSF54211 9 166 6.07E-34 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 212 227 1.7E-6 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 320 333 1.7E-6 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 344 356 1.7E-6 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 292 306 1.7E-6 T 20-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 405 502 9.9E-35 T 20-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 Gene3D G3DSA:3.40.50.300 190 391 1.3E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 Gene3D G3DSA:3.30.230.10 5 166 6.0E-32 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS03745 c0b09b7d5911e24661877ddd8b7f253d 511 SMART SM00382 213 395 1.3E-5 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS00380 0ca0daf329b49bc235d6250d785df035 148 SMART SM00448 6 124 4.7E-13 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00380 0ca0daf329b49bc235d6250d785df035 148 PANTHER PTHR26402 6 126 6.2E-17 T 20-04-2016 APS56_RS00380 0ca0daf329b49bc235d6250d785df035 148 Gene3D G3DSA:3.40.50.2300 4 129 4.4E-25 T 20-04-2016 APS56_RS00380 0ca0daf329b49bc235d6250d785df035 148 Pfam PF00072 Response regulator receiver domain 8 124 4.1E-18 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00380 0ca0daf329b49bc235d6250d785df035 148 SUPERFAMILY SSF52172 5 135 3.56E-25 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 Gene3D G3DSA:3.40.720.10 30 467 6.4E-109 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 Pfam PF00245 Alkaline phosphatase 39 464 8.2E-73 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PANTHER PTHR11596 25 398 5.6E-101 T 20-04-2016 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PANTHER PTHR11596 416 468 5.6E-101 T 20-04-2016 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 SUPERFAMILY SSF53649 416 464 4.94E-101 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 SUPERFAMILY SSF53649 32 344 4.94E-101 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PANTHER PTHR11596:SF5 25 398 5.6E-101 T 20-04-2016 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PANTHER PTHR11596:SF5 416 468 5.6E-101 T 20-04-2016 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PRINTS PR00113 Alkaline phosphatase signature 176 186 1.2E-34 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PRINTS PR00113 Alkaline phosphatase signature 132 152 1.2E-34 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PRINTS PR00113 Alkaline phosphatase signature 253 282 1.2E-34 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PRINTS PR00113 Alkaline phosphatase signature 95 110 1.2E-34 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 PRINTS PR00113 Alkaline phosphatase signature 39 59 1.2E-34 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS12870 648ab4cbdd05fac06c640f58f45a5c2c 469 SMART SM00098 40 466 5.0E-34 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 Gene3D G3DSA:2.40.50.140 7 84 1.3E-32 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 83 24.457 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 PANTHER PTHR10744:SF1 1 84 5.0E-33 T 20-04-2016 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 5.1E-33 T 20-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 Pfam PF00366 Ribosomal protein S17 12 79 8.1E-30 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 20-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 12 78 4.0E-20 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 SUPERFAMILY SSF50249 7 84 1.54E-29 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 PANTHER PTHR10744 1 84 5.0E-33 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 6.5E-11 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 6.5E-11 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13990 fd671ec6601826a7af8b2f76cc4757b0 85 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 6.5E-11 T 20-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 Pfam PF13715 CarboxypepD_reg-like domain 133 214 7.0E-18 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 323 351 2.8E-13 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 PANTHER PTHR11532 913 1125 2.2E-130 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 PANTHER PTHR11532 130 532 2.2E-130 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 PANTHER PTHR11532 623 652 2.2E-130 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 PANTHER PTHR11532 684 896 2.2E-130 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 PANTHER PTHR11532:SF57 913 1125 2.2E-130 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 PANTHER PTHR11532:SF57 130 532 2.2E-130 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 PANTHER PTHR11532:SF57 623 652 2.2E-130 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 PANTHER PTHR11532:SF57 684 896 2.2E-130 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 SUPERFAMILY SSF49464 131 212 1.44E-15 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 Gene3D G3DSA:2.60.40.1120 133 216 4.6E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 Gene3D G3DSA:2.40.170.20 965 990 7.2E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 Gene3D G3DSA:2.40.170.20 346 366 7.2E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 Gene3D G3DSA:2.40.170.20 1033 1124 7.2E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 Gene3D G3DSA:2.40.170.20 437 895 7.2E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 131 1125 1.9E-163 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 Gene3D G3DSA:2.170.130.10 217 345 1.2E-14 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 Pfam PF07715 TonB-dependent Receptor Plug Domain 225 346 1.1E-14 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 SUPERFAMILY SSF56935 547 888 1.51E-59 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 SUPERFAMILY SSF56935 956 1000 1.51E-59 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 SUPERFAMILY SSF56935 428 515 1.51E-59 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 SUPERFAMILY SSF56935 211 370 1.51E-59 T 20-04-2016 APS56_RS15720 21f1a64ea109f36461b242f3eb170c8a 1125 SUPERFAMILY SSF56935 1049 1098 1.51E-59 T 20-04-2016 APS56_RS04870 6f123880f8ce3008cfcbf57a6480dee0 416 Gene3D G3DSA:1.10.443.10 221 402 7.5E-31 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS04870 6f123880f8ce3008cfcbf57a6480dee0 416 SUPERFAMILY SSF56349 109 398 2.59E-40 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS04870 6f123880f8ce3008cfcbf57a6480dee0 416 PANTHER PTHR30349:SF26 41 416 1.4E-64 T 20-04-2016 APS56_RS04870 6f123880f8ce3008cfcbf57a6480dee0 416 PANTHER PTHR30349 41 416 1.4E-64 T 20-04-2016 APS56_RS04870 6f123880f8ce3008cfcbf57a6480dee0 416 Pfam PF13102 Phage integrase SAM-like domain 14 170 1.0E-23 T 20-04-2016 IPR025269 Phage integrase SAM-like domain APS56_RS04870 6f123880f8ce3008cfcbf57a6480dee0 416 Pfam PF00589 Phage integrase family 258 389 1.6E-15 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 PANTHER PTHR21262 3 739 1.0E-266 T 20-04-2016 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 Pfam PF13291 ACT domain 661 738 2.7E-17 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 SUPERFAMILY SSF109604 17 207 7.63E-64 T 20-04-2016 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 SMART SM00471 54 170 2.9E-6 T 20-04-2016 IPR003607 HD/PDEase domain APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 39 737 1.8E-182 T 20-04-2016 IPR004811 RelA/SpoT family GO:0015969 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 Gene3D G3DSA:3.30.70.260 665 736 1.8E-7 T 20-04-2016 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 SUPERFAMILY SSF81271 394 466 7.19E-20 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 SUPERFAMILY SSF55021 666 738 1.27E-6 T 20-04-2016 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 SUPERFAMILY SSF81301 198 411 1.06E-47 T 20-04-2016 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 Pfam PF13328 HD domain 39 192 3.9E-46 T 20-04-2016 IPR003607 HD/PDEase domain APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 PANTHER PTHR21262:SF0 3 739 1.0E-266 T 20-04-2016 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 Pfam PF04607 Region found in RelA / SpoT proteins 252 367 1.9E-24 T 20-04-2016 IPR007685 RelA/SpoT GO:0015969 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 SMART SM00954 252 367 2.4E-40 T 20-04-2016 IPR007685 RelA/SpoT GO:0015969 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 Gene3D G3DSA:3.30.460.10 209 346 2.3E-33 T 20-04-2016 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 Pfam PF02824 TGS domain 407 466 1.1E-20 T 20-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APS56_RS03915 3c1753efe2c5ed3997072b8be292a3a7 739 Gene3D G3DSA:3.10.20.30 406 469 1.7E-22 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 SUPERFAMILY SSF53639 229 424 5.89E-27 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 SMART SM01007 12 188 3.9E-51 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 SMART SM01007 232 404 8.0E-12 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 233 401 1.5E-17 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 186 3.0E-41 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 Gene3D G3DSA:3.40.225.10 6 210 4.8E-52 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 Gene3D G3DSA:3.40.225.10 229 427 8.3E-32 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 PANTHER PTHR22789 1 220 1.7E-54 T 20-04-2016 APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 SUPERFAMILY SSF53639 5 210 2.94E-51 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00650 93426f16f947a89d6d4a6ca9883ab772 429 PANTHER PTHR22789:SF0 1 220 1.7E-54 T 20-04-2016 APS56_RS11460 c482b3392d7904c4ef1e42a1dbefd056 181 Pfam PF03795 YCII-related domain 98 172 1.3E-6 T 20-04-2016 IPR005545 YCII-related APS56_RS11460 c482b3392d7904c4ef1e42a1dbefd056 181 SUPERFAMILY SSF54909 79 176 3.49E-11 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel APS56_RS11460 c482b3392d7904c4ef1e42a1dbefd056 181 Gene3D G3DSA:3.30.70.1060 96 172 7.9E-9 T 20-04-2016 APS56_RS07960 f0a8bc83f39e97a3870d4c81124d2b4b 270 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 21 267 1.1E-88 T 20-04-2016 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APS56_RS07960 f0a8bc83f39e97a3870d4c81124d2b4b 270 Gene3D G3DSA:3.40.50.1580 2 269 4.2E-90 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APS56_RS07960 f0a8bc83f39e97a3870d4c81124d2b4b 270 PIRSF PIRSF000477 1 270 3.0E-88 T 20-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APS56_RS07960 f0a8bc83f39e97a3870d4c81124d2b4b 270 Pfam PF01048 Phosphorylase superfamily 22 267 1.0E-44 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APS56_RS07960 f0a8bc83f39e97a3870d4c81124d2b4b 270 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 21 268 1.1E-88 T 20-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APS56_RS07960 f0a8bc83f39e97a3870d4c81124d2b4b 270 SUPERFAMILY SSF53167 2 269 2.09E-81 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APS56_RS07960 f0a8bc83f39e97a3870d4c81124d2b4b 270 PANTHER PTHR11904:SF9 1 270 1.9E-99 T 20-04-2016 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|UniPathway: UPA00606 APS56_RS07960 f0a8bc83f39e97a3870d4c81124d2b4b 270 PANTHER PTHR11904 1 270 1.9E-99 T 20-04-2016 IPR001369 PNP/MTAP phosphorylase APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 PANTHER PTHR12143:SF22 4 379 1.2E-208 T 20-04-2016 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 PANTHER PTHR12143:SF22 395 740 1.2E-208 T 20-04-2016 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 SUPERFAMILY SSF48208 280 720 2.49E-29 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 Gene3D G3DSA:1.20.1610.10 445 600 1.8E-61 T 20-04-2016 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 Gene3D G3DSA:3.30.2080.10 601 742 1.2E-64 T 20-04-2016 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 Gene3D G3DSA:2.70.98.10 31 331 4.7E-94 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 5 739 3.4E-213 T 20-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 Pfam PF07971 Glycosyl hydrolase family 92 252 734 1.7E-164 T 20-04-2016 IPR012939 Glycosyl hydrolase family 92 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 Gene3D G3DSA:1.20.1050.60 356 444 1.2E-31 T 20-04-2016 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 PANTHER PTHR12143 4 379 1.2E-208 T 20-04-2016 APS56_RS03085 8ed945d9aa3848461475591a2793db28 744 PANTHER PTHR12143 395 740 1.2E-208 T 20-04-2016 APS56_RS08465 cfeadffced945fb23dd43b96d8109a68 397 PANTHER PTHR30474:SF2 11 393 3.7E-96 T 20-04-2016 APS56_RS08465 cfeadffced945fb23dd43b96d8109a68 397 PANTHER PTHR30474 11 393 3.7E-96 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APS56_RS08465 cfeadffced945fb23dd43b96d8109a68 397 Pfam PF01098 Cell cycle protein 12 376 3.4E-71 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APS56_RS01805 9a4ed2f1def2e31a1b6b5f66dd01f3b0 233 PANTHER PTHR12725:SF59 8 231 5.9E-78 T 20-04-2016 APS56_RS01805 9a4ed2f1def2e31a1b6b5f66dd01f3b0 233 Gene3D G3DSA:1.10.150.240 23 91 2.2E-28 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APS56_RS01805 9a4ed2f1def2e31a1b6b5f66dd01f3b0 233 PANTHER PTHR12725 8 231 5.9E-78 T 20-04-2016 APS56_RS01805 9a4ed2f1def2e31a1b6b5f66dd01f3b0 233 Gene3D G3DSA:3.40.50.1000 92 233 8.9E-43 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01805 9a4ed2f1def2e31a1b6b5f66dd01f3b0 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 80 187 5.9E-12 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01805 9a4ed2f1def2e31a1b6b5f66dd01f3b0 233 SUPERFAMILY SSF56784 6 233 1.27E-29 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01360 62fe4e2d4da8c84c8bf774b19355fe03 276 Pfam PF13509 S1 domain 4 63 8.3E-23 T 20-04-2016 APS56_RS01360 62fe4e2d4da8c84c8bf774b19355fe03 276 PIRSF PIRSF012524 1 276 2.9E-63 T 20-04-2016 IPR014464 Conserved virulence factor B APS56_RS01360 62fe4e2d4da8c84c8bf774b19355fe03 276 PANTHER PTHR37296 1 276 9.8E-83 T 20-04-2016 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 SUPERFAMILY SSF51735 200 446 1.01E-77 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 Gene3D G3DSA:3.40.192.10 66 187 2.8E-62 T 20-04-2016 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 Gene3D G3DSA:3.40.50.720 207 371 6.0E-63 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 Gene3D G3DSA:1.10.285.10 5 65 1.1E-20 T 20-04-2016 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 Gene3D G3DSA:1.10.285.10 372 447 3.9E-28 T 20-04-2016 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 233 253 1.8E-31 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 191 213 1.8E-31 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 1.8E-31 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 371 382 1.8E-31 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 PANTHER PTHR11606:SF4 1 447 4.4E-247 T 20-04-2016 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 SUPERFAMILY SSF53223 5 194 3.84E-71 T 20-04-2016 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 200 445 1.8E-86 T 20-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 PIRSF PIRSF000185 20 447 1.3E-115 T 20-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 120 133 - T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 4.3E-51 T 20-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 SMART SM00839 202 445 1.4E-94 T 20-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APS56_RS10135 ebd4add38c714e179ac1bd2c42deb697 447 PANTHER PTHR11606 1 447 4.4E-247 T 20-04-2016 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 Gene3D G3DSA:2.40.170.20 317 940 1.1E-47 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 Gene3D G3DSA:2.40.170.20 232 238 1.1E-47 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 SUPERFAMILY SSF56935 314 940 1.54E-74 T 20-04-2016 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 SUPERFAMILY SSF56935 109 252 1.54E-74 T 20-04-2016 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 Pfam PF13715 CarboxypepD_reg-like domain 25 112 8.5E-17 T 20-04-2016 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 PANTHER PTHR30069:SF11 4 261 1.0E-27 T 20-04-2016 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 SUPERFAMILY SSF49464 23 110 5.89E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 PANTHER PTHR30069 4 261 1.0E-27 T 20-04-2016 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 Pfam PF07715 TonB-dependent Receptor Plug Domain 129 229 1.0E-11 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 Gene3D G3DSA:2.170.130.10 129 231 9.5E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09310 dc26fd531c7c452515d78db08f55ce5c 940 Gene3D G3DSA:2.60.40.1120 25 102 2.1E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS01635 683232c4d365f070a6d903669ee74da1 970 SUPERFAMILY SSF69322 49 184 2.62E-11 T 20-04-2016 APS56_RS01635 683232c4d365f070a6d903669ee74da1 970 Pfam PF07495 Y_Y_Y domain 646 709 1.1E-8 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS01635 683232c4d365f070a6d903669ee74da1 970 SUPERFAMILY SSF55874 819 912 2.62E-6 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01635 683232c4d365f070a6d903669ee74da1 970 Gene3D G3DSA:3.30.565.10 814 969 4.7E-8 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01635 683232c4d365f070a6d903669ee74da1 970 SUPERFAMILY SSF69322 335 579 1.02E-5 T 20-04-2016 APS56_RS01635 683232c4d365f070a6d903669ee74da1 970 SUPERFAMILY SSF69322 229 405 2.62E-11 T 20-04-2016 APS56_RS01635 683232c4d365f070a6d903669ee74da1 970 PANTHER PTHR34220 708 914 1.9E-38 T 20-04-2016 APS56_RS01635 683232c4d365f070a6d903669ee74da1 970 Pfam PF06580 Histidine kinase 763 842 3.5E-21 T 20-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 Gene3D G3DSA:1.50.10.20 1399 1648 2.9E-26 T 20-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 995 1134 1.0E-15 T 20-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1400 1424 2.4E-7 T 20-04-2016 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 PANTHER PTHR40094:SF1 35 1856 1.3E-118 T 20-04-2016 APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 Pfam PF01835 MG2 domain 628 708 2.3E-15 T 20-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 PANTHER PTHR40094 35 1856 1.3E-118 T 20-04-2016 APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 SMART SM01359 992 1134 7.1E-32 T 20-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 528 621 3.0E-15 T 20-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 SMART SM01360 1199 1288 7.9E-18 T 20-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 Pfam PF00207 Alpha-2-macroglobulin family 1207 1287 1.1E-10 T 20-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APS56_RS11475 c907b9b03b2620807754d4f2555f288c 1856 SUPERFAMILY SSF48239 1399 1648 1.57E-38 T 20-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 277 1.7E-65 T 20-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 194 206 8.1E-17 T 20-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 8.1E-17 T 20-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 60 73 8.1E-17 T 20-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 36 50 8.1E-17 T 20-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 PANTHER PTHR30481:SF3 2 299 2.1E-105 T 20-04-2016 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 PANTHER PTHR30481 2 299 2.1E-105 T 20-04-2016 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 Gene3D G3DSA:1.10.1020.10 70 174 3.0E-31 T 20-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 294 5.1E-91 T 20-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 Gene3D G3DSA:3.40.50.150 179 296 2.5E-56 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 Gene3D G3DSA:3.40.50.150 2 69 2.5E-56 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 PIRSF PIRSF000398 1 300 5.9E-76 T 20-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 APS56_RS01845 a5344227ab91efdc992b7cc104ad8035 305 SUPERFAMILY SSF53335 4 295 6.23E-76 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 338 6.6E-121 T 20-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 Gene3D G3DSA:3.40.50.720 1 181 1.6E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 PANTHER PTHR10366:SF39 3 336 1.1E-126 T 20-04-2016 APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 Gene3D G3DSA:3.90.25.10 269 336 1.6E-45 T 20-04-2016 APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 Gene3D G3DSA:3.90.25.10 182 234 1.6E-45 T 20-04-2016 APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 SUPERFAMILY SSF51735 1 336 3.06E-81 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 PANTHER PTHR10366 3 336 1.1E-126 T 20-04-2016 APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 PRINTS PR01713 Nucleotide sugar epimerase signature 261 276 4.9E-5 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 PRINTS PR01713 Nucleotide sugar epimerase signature 300 317 4.9E-5 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 4.9E-5 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APS56_RS08895 3a96dfe52f93eb19f6b8cbde355178cb 341 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 328 7.7E-51 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 PANTHER PTHR32439:SF0 293 547 9.7E-96 T 20-04-2016 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 PANTHER PTHR32439:SF0 45 274 9.7E-96 T 20-04-2016 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Gene3D G3DSA:3.30.413.10 123 272 1.2E-35 T 20-04-2016 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Gene3D G3DSA:1.20.120.330 580 687 7.6E-14 T 20-04-2016 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 PRINTS PR00397 Sirohaem Fe-binding site signature 397 415 4.44E-5 T 20-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 PRINTS PR00397 Sirohaem Fe-binding site signature 444 462 4.44E-5 T 20-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Gene3D G3DSA:3.30.413.10 398 538 9.7E-22 T 20-04-2016 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 SUPERFAMILY SSF55124 19 122 6.87E-24 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 SUPERFAMILY SSF56014 398 558 5.76E-28 T 20-04-2016 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 PANTHER PTHR32439 293 547 9.7E-96 T 20-04-2016 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 PANTHER PTHR32439 45 274 9.7E-96 T 20-04-2016 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 123 272 2.9E-31 T 20-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 394 516 5.5E-5 T 20-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 SUPERFAMILY SSF55124 306 408 9.49E-23 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Gene3D G3DSA:3.90.480.10 51 120 9.7E-32 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Gene3D G3DSA:3.90.480.10 313 389 9.7E-32 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 319 384 5.4E-13 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 48 112 4.8E-18 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 SUPERFAMILY SSF55124 254 277 9.49E-23 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 Pfam PF05168 HEPN domain 583 687 2.9E-10 T 20-04-2016 IPR007842 HEPN domain APS56_RS07395 b8cce8fca2b3ff3a511cee03b5df06d6 698 SUPERFAMILY SSF56014 123 273 9.95E-42 T 20-04-2016 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 PANTHER PTHR30266 1 140 3.5E-30 T 20-04-2016 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 SUPERFAMILY SSF81330 13 127 2.88E-27 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 PANTHER PTHR30266:SF2 1 140 3.5E-30 T 20-04-2016 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.5E-11 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 99 108 1.5E-11 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 90 98 1.5E-11 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 20-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 140 22.546 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 139 5.5E-31 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS16125 ffb6ea9ae74af6b26ce60b97a87d2901 148 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 136 4.6E-33 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 PIRSF PIRSF005814 1 722 4.6E-145 T 20-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 SUPERFAMILY SSF48334 77 291 4.45E-11 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 Pfam PF00488 MutS domain V 338 520 4.0E-31 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 Gene3D G3DSA:3.40.50.300 294 521 2.5E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 PANTHER PTHR11361:SF14 11 606 1.4E-131 T 20-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 SUPERFAMILY SSF52540 294 520 1.43E-35 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 SMART SM00534 335 520 1.9E-48 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 PANTHER PTHR11361 11 606 1.4E-131 T 20-04-2016 APS56_RS02320 a8c9463b3d5e57035c3de2cbb2bfd945 722 SMART SM00533 12 316 7.5E-5 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 PANTHER PTHR12725 26 262 2.3E-43 T 20-04-2016 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 Gene3D G3DSA:1.10.150.240 72 122 2.2E-6 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 46 223 2.0E-11 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 PANTHER PTHR12725:SF66 26 262 2.3E-43 T 20-04-2016 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 159 1.1E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 195 215 1.1E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 43 54 1.1E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 177 193 1.1E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 222 235 1.1E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 82 95 1.1E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 SUPERFAMILY SSF56784 38 244 6.24E-43 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 Pfam PF13419 Haloacid dehalogenase-like hydrolase 93 231 1.3E-14 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 44 238 1.9E-49 T 20-04-2016 IPR006328 Haloacid dehalogenase, type II GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 APS56_RS07755 bfe5cc5d407b60bb3994126c3accae19 266 Gene3D G3DSA:3.40.50.1000 123 243 4.2E-30 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 SUPERFAMILY SSF141734 3 114 6.93E-45 T 20-04-2016 APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 PANTHER PTHR21256 3 196 5.7E-94 T 20-04-2016 APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 111 195 2.7E-11 T 20-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 109 192 4.2E-27 T 20-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 1 197 34.959 T 20-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 105 192 18.854 T 20-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 48 100 6.0E-21 T 20-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 SUPERFAMILY SSF101386 108 197 3.27E-22 T 20-04-2016 APS56_RS01915 390400aeb38c81662a778c27acbc6f7a 197 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 25 97 7.2E-31 T 20-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APS56_RS02150 0c7cf18a67ad92479fde3ead18e48b19 255 PANTHER PTHR12042 22 90 1.3E-15 T 20-04-2016 APS56_RS02150 0c7cf18a67ad92479fde3ead18e48b19 255 SUPERFAMILY SSF53448 1 250 8.89E-62 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS02150 0c7cf18a67ad92479fde3ead18e48b19 255 PANTHER PTHR12042:SF20 22 90 1.3E-15 T 20-04-2016 APS56_RS02150 0c7cf18a67ad92479fde3ead18e48b19 255 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 20 96 3.2E-15 T 20-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 SUPERFAMILY SSF52374 204 282 3.66E-98 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 SUPERFAMILY SSF52374 798 847 3.66E-98 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 SUPERFAMILY SSF52374 1 145 3.66E-98 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 SUPERFAMILY SSF52374 472 642 3.66E-98 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 SUPERFAMILY SSF47323 842 1023 3.71E-30 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 1024 20.866 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946 296 321 2.0E-303 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946 1 146 2.0E-303 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946 795 1023 2.0E-303 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946 556 639 2.0E-303 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946 205 263 2.0E-303 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946 344 525 2.0E-303 T 20-04-2016 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Gene3D G3DSA:1.10.730.10 828 960 2.7E-37 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 277 455 1.7E-59 T 20-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PRINTS PR00985 Leucyl-tRNA synthetase signature 592 614 7.6E-38 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PRINTS PR00985 Leucyl-tRNA synthetase signature 271 290 7.6E-38 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PRINTS PR00985 Leucyl-tRNA synthetase signature 242 255 7.6E-38 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 7.6E-38 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PRINTS PR00985 Leucyl-tRNA synthetase signature 553 571 7.6E-38 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PRINTS PR00985 Leucyl-tRNA synthetase signature 625 635 7.6E-38 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Pfam PF08264 Anticodon-binding domain of tRNA 875 986 3.0E-16 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946:SF7 296 321 2.0E-303 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946:SF7 1 146 2.0E-303 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946:SF7 795 1023 2.0E-303 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946:SF7 556 639 2.0E-303 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946:SF7 205 263 2.0E-303 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 PANTHER PTHR11946:SF7 344 525 2.0E-303 T 20-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Gene3D G3DSA:3.40.50.620 480 641 5.6E-148 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Gene3D G3DSA:3.40.50.620 3 145 5.6E-148 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Gene3D G3DSA:3.40.50.620 798 827 5.6E-148 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Gene3D G3DSA:3.40.50.620 204 279 5.6E-148 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Gene3D G3DSA:3.90.740.10 280 479 2.2E-59 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 11 144 5.2E-14 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12255 be455a479942152c633a2f4a8b1863b8 1024 SUPERFAMILY SSF50677 282 470 1.57E-46 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 Gene3D G3DSA:3.30.70.890 166 296 1.8E-38 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 PANTHER PTHR20861:SF1 1 307 6.9E-84 T 20-04-2016 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 PRINTS PR00958 Homoserine kinase signature 252 267 6.8E-28 T 20-04-2016 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 PRINTS PR00958 Homoserine kinase signature 11 26 6.8E-28 T 20-04-2016 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 PRINTS PR00958 Homoserine kinase signature 173 190 6.8E-28 T 20-04-2016 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 PRINTS PR00958 Homoserine kinase signature 135 148 6.8E-28 T 20-04-2016 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 PRINTS PR00958 Homoserine kinase signature 95 110 6.8E-28 T 20-04-2016 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 PIRSF PIRSF000676 1 308 2.3E-79 T 20-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 Pfam PF08544 GHMP kinases C terminal 208 286 4.4E-9 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 SUPERFAMILY SSF55060 170 287 3.17E-30 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 SUPERFAMILY SSF54211 4 153 3.87E-26 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 Gene3D G3DSA:3.30.230.10 3 154 6.7E-39 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 TIGRFAM TIGR00191 thrB: homoserine kinase 5 307 1.5E-74 T 20-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 PANTHER PTHR20861 1 307 6.9E-84 T 20-04-2016 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 Pfam PF00288 GHMP kinases N terminal domain 82 148 5.3E-11 T 20-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APS56_RS03580 eba1f128b6d5c9ba1cf53372711b5501 308 Hamap MF_00384 Homoserine kinase [thrB]. 4 306 29.275 T 20-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APS56_RS16140 979a385eb0a50c59ed09d67f3e22b485 213 PIRSF PIRSF000239 1 209 3.5E-79 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APS56_RS16140 979a385eb0a50c59ed09d67f3e22b485 213 Pfam PF00578 AhpC/TSA family 7 135 8.4E-30 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS16140 979a385eb0a50c59ed09d67f3e22b485 213 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 157 193 5.0E-11 T 20-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS16140 979a385eb0a50c59ed09d67f3e22b485 213 PANTHER PTHR10681:SF99 4 207 1.8E-88 T 20-04-2016 APS56_RS16140 979a385eb0a50c59ed09d67f3e22b485 213 Gene3D G3DSA:3.30.1020.10 159 211 9.1E-27 T 20-04-2016 APS56_RS16140 979a385eb0a50c59ed09d67f3e22b485 213 Gene3D G3DSA:3.40.30.10 5 158 3.4E-61 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS16140 979a385eb0a50c59ed09d67f3e22b485 213 SUPERFAMILY SSF52833 4 210 2.85E-69 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS16140 979a385eb0a50c59ed09d67f3e22b485 213 PANTHER PTHR10681 4 207 1.8E-88 T 20-04-2016 APS56_RS12915 ebaad2897da8ff4301a4f563e3e07401 176 PANTHER PTHR40394:SF2 9 146 2.0E-14 T 20-04-2016 APS56_RS12915 ebaad2897da8ff4301a4f563e3e07401 176 PANTHER PTHR40394 9 146 2.0E-14 T 20-04-2016 APS56_RS12915 ebaad2897da8ff4301a4f563e3e07401 176 Pfam PF11821 Protein of unknown function (DUF3341) 5 170 6.1E-60 T 20-04-2016 IPR021776 Protein of unknown function DUF3341 APS56_RS06855 a140660a3d3c1606b76e864789e2b2e6 125 Gene3D G3DSA:3.10.450.50 14 121 7.3E-7 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS06855 a140660a3d3c1606b76e864789e2b2e6 125 SUPERFAMILY SSF54427 16 121 2.85E-6 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 Gene3D G3DSA:3.30.70.1430 33 136 4.3E-12 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 SUPERFAMILY SSF82693 35 130 2.44E-8 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 SUPERFAMILY SSF82714 180 263 2.35E-14 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 SUPERFAMILY SSF82866 789 1009 1.09E-46 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 Gene3D G3DSA:3.30.2090.10 703 786 1.2E-12 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 SUPERFAMILY SSF82693 265 320 8.24E-14 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 SUPERFAMILY SSF82693 133 178 8.24E-14 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 PANTHER PTHR32063 1 1008 2.0E-249 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 Pfam PF00873 AcrB/AcrD/AcrF family 4 1006 8.7E-175 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 SUPERFAMILY SSF82866 287 487 3.14E-39 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 Gene3D G3DSA:1.10.3850.10 272 489 1.1E-47 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 Gene3D G3DSA:1.10.3850.10 794 1009 6.7E-56 T 20-04-2016 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 Gene3D G3DSA:3.30.2090.10 178 264 4.7E-15 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 SUPERFAMILY SSF82714 705 787 2.35E-12 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 PRINTS PR00702 Acriflavin resistance protein family signature 31 49 6.8E-25 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 6.8E-25 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 PRINTS PR00702 Acriflavin resistance protein family signature 460 483 6.8E-25 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 PRINTS PR00702 Acriflavin resistance protein family signature 3 27 6.8E-25 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14575 56f3f0d5f0862522cf265461a896daae 1012 PRINTS PR00702 Acriflavin resistance protein family signature 353 374 6.8E-25 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS12235 9f5bfb79662a5b55ab0360cb9110dbcf 374 PANTHER PTHR21599:SF0 1 357 3.3E-122 T 20-04-2016 APS56_RS12235 9f5bfb79662a5b55ab0360cb9110dbcf 374 Gene3D G3DSA:3.90.1510.10 42 274 2.0E-82 T 20-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APS56_RS12235 9f5bfb79662a5b55ab0360cb9110dbcf 374 SUPERFAMILY SSF110738 1 370 2.09E-112 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APS56_RS12235 9f5bfb79662a5b55ab0360cb9110dbcf 374 PANTHER PTHR21599 1 357 3.3E-122 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APS56_RS12235 9f5bfb79662a5b55ab0360cb9110dbcf 374 PIRSF PIRSF006078 1 373 1.0E-129 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APS56_RS12235 9f5bfb79662a5b55ab0360cb9110dbcf 374 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 369 3.0E-121 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APS56_RS12235 9f5bfb79662a5b55ab0360cb9110dbcf 374 Pfam PF02595 Glycerate kinase family 3 370 3.9E-127 T 20-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APS56_RS16120 7973211cdc405f2e558caa34f680b0ee 1064 Pfam PF05140 ResB-like family 348 420 3.3E-11 T 20-04-2016 IPR007816 ResB-like domain APS56_RS16120 7973211cdc405f2e558caa34f680b0ee 1064 Pfam PF05140 ResB-like family 78 121 2.1E-6 T 20-04-2016 IPR007816 ResB-like domain APS56_RS16120 7973211cdc405f2e558caa34f680b0ee 1064 Pfam PF01578 Cytochrome C assembly protein 822 1026 7.7E-42 T 20-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APS56_RS16120 7973211cdc405f2e558caa34f680b0ee 1064 PANTHER PTHR30071:SF5 741 1063 3.1E-68 T 20-04-2016 APS56_RS16120 7973211cdc405f2e558caa34f680b0ee 1064 PANTHER PTHR30071 741 1063 3.1E-68 T 20-04-2016 APS56_RS03370 19d285b70168a9031acb2be36c1dca8c 94 Pfam PF10825 Protein of unknown function (DUF2752) 8 54 3.0E-16 T 20-04-2016 IPR021215 Protein of unknown function DUF2752 APS56_RS04510 043a4cb731f573595241fc1591aec857 271 TIGRFAM TIGR02127 pyrF_sub2: orotidine 5'-phosphate decarboxylase 4 252 9.1E-73 T 20-04-2016 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 GO:0004590|GO:0006221 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS04510 043a4cb731f573595241fc1591aec857 271 PANTHER PTHR19278:SF1 4 225 8.1E-69 T 20-04-2016 APS56_RS04510 043a4cb731f573595241fc1591aec857 271 Gene3D G3DSA:3.20.20.70 4 259 2.5E-66 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS04510 043a4cb731f573595241fc1591aec857 271 PANTHER PTHR19278 4 225 8.1E-69 T 20-04-2016 APS56_RS04510 043a4cb731f573595241fc1591aec857 271 SMART SM00934 16 254 9.1E-44 T 20-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS04510 043a4cb731f573595241fc1591aec857 271 SUPERFAMILY SSF51366 2 254 3.2E-76 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APS56_RS04510 043a4cb731f573595241fc1591aec857 271 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 17 249 1.1E-28 T 20-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 SUPERFAMILY SSF46785 5 66 3.52E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 Gene3D G3DSA:3.30.70.920 59 147 5.3E-17 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 SMART SM00344 6 113 8.5E-35 T 20-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 Pfam PF01037 Lrp/AsnC ligand binding domain 72 143 3.7E-10 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.3E-10 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.3E-10 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.3E-10 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 53 2.1E-15 T 20-04-2016 APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 PANTHER PTHR30154:SF2 1 155 1.1E-40 T 20-04-2016 APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 PANTHER PTHR30154 1 155 1.1E-40 T 20-04-2016 APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 Gene3D G3DSA:1.10.10.10 2 55 1.1E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02255 d78b78c5c43451b1a702e05e1cbed022 159 SUPERFAMILY SSF54909 68 146 2.28E-13 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel APS56_RS03005 18c28c1a4a6d1e9bd5159b9527f28e65 441 Pfam PF00884 Sulfatase 29 347 1.9E-81 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS03005 18c28c1a4a6d1e9bd5159b9527f28e65 441 Gene3D G3DSA:3.40.720.10 27 363 5.3E-113 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS03005 18c28c1a4a6d1e9bd5159b9527f28e65 441 Gene3D G3DSA:3.30.1120.10 368 436 5.6E-20 T 20-04-2016 APS56_RS03005 18c28c1a4a6d1e9bd5159b9527f28e65 441 ProSitePatterns PS00523 Sulfatases signature 1. 75 87 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS03005 18c28c1a4a6d1e9bd5159b9527f28e65 441 PANTHER PTHR10342:SF199 1 438 1.9E-165 T 20-04-2016 APS56_RS03005 18c28c1a4a6d1e9bd5159b9527f28e65 441 PANTHER PTHR10342 1 438 1.9E-165 T 20-04-2016 APS56_RS03005 18c28c1a4a6d1e9bd5159b9527f28e65 441 SUPERFAMILY SSF53649 27 435 4.51E-130 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS16085 5e6468284f090b1dd6ec26e1c91448c8 179 PANTHER PTHR30221 18 169 5.4E-23 T 20-04-2016 APS56_RS16085 5e6468284f090b1dd6ec26e1c91448c8 179 Gene3D G3DSA:2.30.30.60 114 165 8.5E-8 T 20-04-2016 APS56_RS16085 5e6468284f090b1dd6ec26e1c91448c8 179 PANTHER PTHR30221:SF8 18 169 5.4E-23 T 20-04-2016 APS56_RS16085 5e6468284f090b1dd6ec26e1c91448c8 179 Pfam PF00924 Mechanosensitive ion channel 55 164 1.9E-12 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APS56_RS16085 5e6468284f090b1dd6ec26e1c91448c8 179 SUPERFAMILY SSF50182 99 165 3.6E-10 T 20-04-2016 IPR010920 LSM domain APS56_RS06825 11be94adbd6169742847ec9af7a384cc 125 PIRSF PIRSF030066 1 125 6.2E-43 T 20-04-2016 IPR016944 Uncharacterised conserved protein UCP030066 APS56_RS06825 11be94adbd6169742847ec9af7a384cc 125 Pfam PF13564 DoxX-like family 11 108 2.9E-20 T 20-04-2016 IPR032808 DoxX family APS56_RS03125 5e7848128dfb769de168eb52a9e040f4 226 PANTHER PTHR36452:SF1 1 226 1.3E-34 T 20-04-2016 APS56_RS03125 5e7848128dfb769de168eb52a9e040f4 226 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 8 216 9.6E-54 T 20-04-2016 IPR012808 Conserved hypothetical protein CHP02453 APS56_RS03125 5e7848128dfb769de168eb52a9e040f4 226 Pfam PF09365 Conserved hypothetical protein (DUF2461) 9 211 8.7E-62 T 20-04-2016 IPR012808 Conserved hypothetical protein CHP02453 APS56_RS03125 5e7848128dfb769de168eb52a9e040f4 226 PANTHER PTHR36452 1 226 1.3E-34 T 20-04-2016 APS56_RS03125 5e7848128dfb769de168eb52a9e040f4 226 PIRSF PIRSF028451 2 220 2.0E-54 T 20-04-2016 IPR015996 Uncharacterised conserved protein UCP028451 APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 ProSitePatterns PS00149 Sulfatases signature 2. 125 135 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 Pfam PF00884 Sulfatase 15 377 2.0E-56 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 Gene3D G3DSA:3.40.720.10 12 396 2.1E-97 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 PANTHER PTHR10342:SF199 1 249 6.0E-101 T 20-04-2016 APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 PANTHER PTHR10342:SF199 266 494 6.0E-101 T 20-04-2016 APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 PANTHER PTHR10342 1 249 6.0E-101 T 20-04-2016 APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 PANTHER PTHR10342 266 494 6.0E-101 T 20-04-2016 APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 Gene3D G3DSA:3.30.1120.10 407 475 2.8E-13 T 20-04-2016 APS56_RS09665 8b2110a6d6d345415fae3211d5974e44 495 SUPERFAMILY SSF53649 13 473 4.45E-111 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS11075 ca35e4c458a4ee8c3f533009fb1d9c18 619 PANTHER PTHR32507 1 526 1.1E-132 T 20-04-2016 APS56_RS11075 ca35e4c458a4ee8c3f533009fb1d9c18 619 Pfam PF00999 Sodium/hydrogen exchanger family 10 398 1.6E-37 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APS56_RS11075 ca35e4c458a4ee8c3f533009fb1d9c18 619 Pfam PF02254 TrkA-N domain 412 499 1.1E-9 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APS56_RS11075 ca35e4c458a4ee8c3f533009fb1d9c18 619 PANTHER PTHR32507:SF0 1 526 1.1E-132 T 20-04-2016 APS56_RS11075 ca35e4c458a4ee8c3f533009fb1d9c18 619 SUPERFAMILY SSF51735 411 524 3.54E-11 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11075 ca35e4c458a4ee8c3f533009fb1d9c18 619 Gene3D G3DSA:3.40.50.720 409 527 5.4E-11 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 PANTHER PTHR23083 21 183 1.7E-17 T 20-04-2016 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 PANTHER PTHR23083 376 572 1.7E-17 T 20-04-2016 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SMART SM00028 376 409 12.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SMART SM00028 117 150 270.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SMART SM00028 507 540 46.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SMART SM00028 16 49 180.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SMART SM00028 470 503 140.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SMART SM00028 83 116 21.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 Gene3D G3DSA:1.25.40.10 22 149 7.7E-18 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 Pfam PF13181 Tetratricopeptide repeat 85 110 0.026 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 Gene3D G3DSA:1.25.40.10 463 572 2.8E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 Gene3D G3DSA:1.25.40.10 280 438 2.0E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SUPERFAMILY SSF48452 464 572 1.06E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SUPERFAMILY SSF48452 320 437 8.85E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 SUPERFAMILY SSF81901 22 181 3.14E-15 T 20-04-2016 APS56_RS09580 7d4602835937bf4bd741bb13c5711c4a 597 Pfam PF13432 Tetratricopeptide repeat 474 528 4.3E-4 T 20-04-2016 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 5.7E-58 T 20-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 488 36.018 T 20-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 SUPERFAMILY SSF51735 28 208 2.57E-57 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 SUPERFAMILY SSF48179 210 370 1.39E-39 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 SUPERFAMILY SSF48179 348 487 2.38E-40 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 PANTHER PTHR21371 1 491 1.2E-183 T 20-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 4.0E-26 T 20-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 353 485 2.8E-18 T 20-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 Gene3D G3DSA:1.10.1040.10 361 484 1.4E-15 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 2.6E-120 T 20-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08755 235498b44da2b0a15e46cc5d73e6004f 491 Gene3D G3DSA:3.40.50.720 1 200 9.3E-72 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 105 299 4.1E-70 T 20-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 SMART SM01210 333 424 9.4E-37 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 423 2.2E-143 T 20-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 Gene3D G3DSA:3.30.470.20 195 331 9.9E-55 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 SMART SM01209 105 299 3.4E-112 T 20-04-2016 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 SUPERFAMILY SSF52440 1 105 1.73E-30 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 PANTHER PTHR10520 1 422 1.0E-215 T 20-04-2016 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 104 4.4E-31 T 20-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 Gene3D G3DSA:3.90.600.10 333 422 2.3E-28 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 37.547 T 20-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 Gene3D G3DSA:3.30.1490.20 124 194 1.0E-24 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 SUPERFAMILY SSF51246 332 423 1.31E-26 T 20-04-2016 IPR011054 Rudiment single hybrid motif APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 Gene3D G3DSA:3.40.50.20 2 96 1.6E-30 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 SUPERFAMILY SSF56059 106 326 3.36E-55 T 20-04-2016 APS56_RS10730 0f3e0019a6a9d5534bed5a3fba1d8a96 424 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 334 422 1.1E-25 T 20-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 413 1.7E-16 T 20-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 15 160 4.9E-35 T 20-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 SUPERFAMILY SSF69742 11 162 1.7E-37 T 20-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 14 413 2.3E-81 T 20-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 181 305 1.5E-26 T 20-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 Gene3D G3DSA:3.40.50.720 168 311 8.2E-23 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 SUPERFAMILY SSF51735 165 314 1.36E-25 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 PANTHER PTHR13812 3 415 4.6E-71 T 20-04-2016 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 103 126 - T 20-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 SUPERFAMILY SSF69075 318 412 1.28E-9 T 20-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 11 414 22.494 T 20-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 PIRSF PIRSF000445 10 419 8.7E-104 T 20-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS10460 ad7df016994bb60c8d9f02f9ff359d1b 420 PANTHER PTHR13812:SF18 3 415 4.6E-71 T 20-04-2016 APS56_RS16295 9e780e64a7dd9f721c883e8abbc37869 237 PANTHER PTHR21091:SF118 21 234 7.4E-19 T 20-04-2016 APS56_RS16295 9e780e64a7dd9f721c883e8abbc37869 237 SUPERFAMILY SSF53790 5 235 9.68E-70 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APS56_RS16295 9e780e64a7dd9f721c883e8abbc37869 237 Gene3D G3DSA:3.30.950.10 122 236 8.7E-27 T 20-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APS56_RS16295 9e780e64a7dd9f721c883e8abbc37869 237 PIRSF PIRSF005917 1 237 1.8E-51 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS16295 9e780e64a7dd9f721c883e8abbc37869 237 PANTHER PTHR21091 21 234 7.4E-19 T 20-04-2016 APS56_RS03920 1e713c444dbf3e3600dc74dc0bc906b5 150 PANTHER PTHR33202:SF2 17 144 5.1E-25 T 20-04-2016 APS56_RS03920 1e713c444dbf3e3600dc74dc0bc906b5 150 Gene3D G3DSA:1.10.10.10 18 93 1.5E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS03920 1e713c444dbf3e3600dc74dc0bc906b5 150 PANTHER PTHR33202 17 144 5.1E-25 T 20-04-2016 APS56_RS03920 1e713c444dbf3e3600dc74dc0bc906b5 150 Pfam PF01475 Ferric uptake regulator family 24 143 2.6E-27 T 20-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APS56_RS03920 1e713c444dbf3e3600dc74dc0bc906b5 150 SUPERFAMILY SSF46785 18 146 7.78E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 140 1.5E-30 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 57 69 1.5E-30 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 1.5E-30 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 112 1.5E-30 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 20 35 1.5E-30 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 148 4.0E-43 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 52 69 - T 20-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 Gene3D G3DSA:2.40.100.10 6 161 1.4E-54 T 20-04-2016 IPR029000 Cyclophilin-like domain APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 SUPERFAMILY SSF54534 184 310 1.96E-47 T 20-04-2016 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 Gene3D G3DSA:3.10.50.40 174 310 8.9E-53 T 20-04-2016 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 218 306 1.0E-33 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 PANTHER PTHR11071 9 145 5.5E-61 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APS56_RS05170 fe4994c2dccbabca8bf8491316b7a484 310 SUPERFAMILY SSF50891 7 148 1.04E-52 T 20-04-2016 IPR029000 Cyclophilin-like domain APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 Gene3D G3DSA:3.40.50.300 15 134 1.4E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 Pfam PF05970 PIF1-like helicase 15 218 3.1E-26 T 20-04-2016 IPR010285 DNA helicase Pif1-like GO:0000723|GO:0003678|GO:0006281 APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 Pfam PF00570 HRDC domain 627 691 9.8E-18 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 SUPERFAMILY SSF52540 131 429 7.7E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 SUPERFAMILY SSF52540 9 217 1.18E-22 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 PANTHER PTHR23274:SF1 4 436 1.8E-112 T 20-04-2016 APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 Gene3D G3DSA:3.40.50.300 136 258 1.6E-26 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 Gene3D G3DSA:3.40.50.300 355 410 1.6E-26 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 SMART SM00341 621 701 4.4E-14 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 SMART SM00382 17 318 3.1E-4 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 PANTHER PTHR23274 4 436 1.8E-112 T 20-04-2016 IPR003840 DNA helicase GO:0004386|GO:0005524 APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 Gene3D G3DSA:1.10.150.80 625 699 8.2E-19 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 SUPERFAMILY SSF47819 623 702 1.55E-21 T 20-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APS56_RS11480 d76ec9b63b78e11ab716ed5d31593fc6 814 Pfam PF14493 Helix-turn-helix domain 722 808 1.9E-20 T 20-04-2016 IPR029491 Helicase Helix-turn-helix domain APS56_RS11050 7cfa8b09bb918c8df361bdd00ff547da 412 Gene3D G3DSA:1.50.10.110 53 353 1.9E-69 T 20-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 APS56_RS11050 7cfa8b09bb918c8df361bdd00ff547da 412 Pfam PF05426 Alginate lyase 71 347 1.0E-73 T 20-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 APS56_RS11050 7cfa8b09bb918c8df361bdd00ff547da 412 PANTHER PTHR41379:SF1 6 368 9.6E-79 T 20-04-2016 APS56_RS11050 7cfa8b09bb918c8df361bdd00ff547da 412 PANTHER PTHR41379 6 368 9.6E-79 T 20-04-2016 APS56_RS11050 7cfa8b09bb918c8df361bdd00ff547da 412 SUPERFAMILY SSF48230 78 347 3.48E-48 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS14040 d402ae5060ff12d01c22b01d8412611c 150 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 150 21.116 T 20-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APS56_RS14040 d402ae5060ff12d01c22b01d8412611c 150 Gene3D G3DSA:3.100.10.10 33 150 1.5E-36 T 20-04-2016 APS56_RS14040 d402ae5060ff12d01c22b01d8412611c 150 ProSitePatterns PS00475 Ribosomal protein L15 signature. 114 144 - T 20-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14040 d402ae5060ff12d01c22b01d8412611c 150 SUPERFAMILY SSF52080 5 149 1.83E-43 T 20-04-2016 IPR021131 Ribosomal protein L18e/L15P APS56_RS14040 d402ae5060ff12d01c22b01d8412611c 150 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 148 9.6E-38 T 20-04-2016 IPR021131 Ribosomal protein L18e/L15P APS56_RS14040 d402ae5060ff12d01c22b01d8412611c 150 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 146 7.3E-46 T 20-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APS56_RS14040 d402ae5060ff12d01c22b01d8412611c 150 PANTHER PTHR12934 1 150 1.1E-62 T 20-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 Pfam PF00581 Rhodanese-like domain 260 352 7.6E-10 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 Pfam PF00581 Rhodanese-like domain 365 456 1.4E-9 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 PANTHER PTHR11935:SF9 3 242 1.7E-92 T 20-04-2016 APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 Pfam PF00753 Metallo-beta-lactamase superfamily 15 181 4.8E-12 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 SUPERFAMILY SSF52821 359 464 2.75E-22 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 SMART SM00849 12 181 1.8E-29 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 PANTHER PTHR11935 3 242 1.7E-92 T 20-04-2016 APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 SUPERFAMILY SSF56281 1 244 9.24E-47 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 SUPERFAMILY SSF52821 224 357 7.86E-18 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 SMART SM00450 258 356 5.7E-4 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 SMART SM00450 363 460 2.0E-12 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 Gene3D G3DSA:3.40.250.10 240 357 3.6E-14 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 Gene3D G3DSA:3.40.250.10 359 467 1.2E-23 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS04925 b13a40c21a59a341a77b30f4fc391d5d 470 Gene3D G3DSA:3.60.15.10 4 239 2.4E-54 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS11405 1b88db65fe1f8e77418639728592ee9a 213 PIRSF PIRSF037839 1 213 1.4E-89 T 20-04-2016 IPR017290 Ribonuclease H, bacteria GO:0004523 APS56_RS11405 1b88db65fe1f8e77418639728592ee9a 213 PANTHER PTHR10642 4 157 5.7E-17 T 20-04-2016 APS56_RS11405 1b88db65fe1f8e77418639728592ee9a 213 Pfam PF00075 RNase H 87 182 1.8E-6 T 20-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APS56_RS11405 1b88db65fe1f8e77418639728592ee9a 213 Pfam PF01693 Caulimovirus viroplasmin 7 49 2.0E-18 T 20-04-2016 IPR011320 Ribonuclease H1, N-terminal APS56_RS11405 1b88db65fe1f8e77418639728592ee9a 213 SUPERFAMILY SSF53098 81 209 3.16E-33 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS11405 1b88db65fe1f8e77418639728592ee9a 213 SUPERFAMILY SSF55658 7 51 4.76E-14 T 20-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APS56_RS11405 1b88db65fe1f8e77418639728592ee9a 213 Gene3D G3DSA:3.30.420.10 85 204 3.1E-13 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS11405 1b88db65fe1f8e77418639728592ee9a 213 Gene3D G3DSA:3.40.970.10 6 53 4.7E-21 T 20-04-2016 IPR011320 Ribonuclease H1, N-terminal APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:1.10.10.60 1324 1374 5.9E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SUPERFAMILY SSF63829 373 622 1.44E-19 T 20-04-2016 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:1.10.10.60 1272 1323 1.0E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:3.40.50.2300 1121 1247 4.9E-40 T 20-04-2016 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:2.120.10.30 268 356 2.1E-7 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:2.120.10.30 379 493 6.3E-8 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:1.10.287.130 835 895 4.0E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SUPERFAMILY SSF63829 94 321 2.29E-15 T 20-04-2016 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF00512 His Kinase A (phospho-acceptor) domain 844 909 7.4E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF07495 Y_Y_Y domain 725 788 3.4E-18 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF00072 Response regulator receiver domain 1128 1234 2.0E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF07494 Two component regulator propeller 87 109 6.8E-5 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF07494 Two component regulator propeller 557 578 4.7E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF07494 Two component regulator propeller 368 389 0.0034 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF07494 Two component regulator propeller 41 63 0.002 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF07494 Two component regulator propeller 464 487 1.9E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF07494 Two component regulator propeller 319 341 1.7E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SUPERFAMILY SSF55874 898 1073 3.14E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PANTHER PTHR24423 786 1279 4.0E-133 T 20-04-2016 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PANTHER PTHR24423 368 432 4.0E-133 T 20-04-2016 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PANTHER PTHR24423 1 140 4.0E-133 T 20-04-2016 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 956 1074 6.8E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SMART SM00342 1287 1370 2.5E-23 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:2.120.10.30 573 672 9.1E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:2.120.10.30 494 572 1.1E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SMART SM00387 955 1075 2.0E-32 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SUPERFAMILY SSF46689 1324 1373 8.06E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SMART SM00388 843 909 1.7E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SUPERFAMILY SSF52172 1121 1245 2.85E-35 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1035 1053 1.8E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1001 1015 1.8E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1059 1072 1.8E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1019 1029 1.8E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SUPERFAMILY SSF47384 834 910 4.71E-17 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Pfam PF12833 Helix-turn-helix domain 1295 1371 1.3E-20 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 Gene3D G3DSA:3.30.565.10 896 1076 2.7E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 SMART SM00448 1125 1237 9.0E-37 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PANTHER PTHR24423:SF487 786 1279 4.0E-133 T 20-04-2016 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PANTHER PTHR24423:SF487 368 432 4.0E-133 T 20-04-2016 APS56_RS04665 113dc71b0d47f4cc7649b7e04aafdcc3 1382 PANTHER PTHR24423:SF487 1 140 4.0E-133 T 20-04-2016 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 Pfam PF01676 Metalloenzyme superfamily 3 494 7.1E-73 T 20-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 Gene3D G3DSA:3.40.720.10 3 76 1.9E-81 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 Gene3D G3DSA:3.40.720.10 311 504 1.9E-81 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 PANTHER PTHR31637 1 505 1.4E-250 T 20-04-2016 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 SUPERFAMILY SSF64158 76 299 9.02E-79 T 20-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 PANTHER PTHR31637:SF0 1 505 1.4E-250 T 20-04-2016 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 SUPERFAMILY SSF53649 307 504 7.85E-68 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 SUPERFAMILY SSF53649 3 76 7.85E-68 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 3 505 9.5E-202 T 20-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 Gene3D G3DSA:3.40.1450.10 77 307 3.5E-89 T 20-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 81 294 8.3E-80 T 20-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 PIRSF PIRSF001492 1 505 2.3E-198 T 20-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS06390 47b28bd7a0dc2cfd0e3c38de2e453ff8 505 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 3 505 45.853 T 20-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS07085 a3ae6d98fcb1b9b90007d8df181b6ab6 149 PANTHER PTHR30471 46 149 1.8E-36 T 20-04-2016 APS56_RS07085 a3ae6d98fcb1b9b90007d8df181b6ab6 149 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 97 102 - T 20-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APS56_RS07085 a3ae6d98fcb1b9b90007d8df181b6ab6 149 Pfam PF04002 RadC-like JAB domain 26 147 1.4E-35 T 20-04-2016 IPR025657 RadC-like JAB domain APS56_RS07085 a3ae6d98fcb1b9b90007d8df181b6ab6 149 Gene3D G3DSA:3.40.140.10 23 149 7.8E-35 T 20-04-2016 APS56_RS02430 c17a2a16b6fc0ff316c957ecce8662e0 122 Gene3D G3DSA:1.10.3830.10 4 121 1.2E-36 T 20-04-2016 APS56_RS02430 c17a2a16b6fc0ff316c957ecce8662e0 122 PANTHER PTHR34299 10 122 7.2E-29 T 20-04-2016 APS56_RS02430 c17a2a16b6fc0ff316c957ecce8662e0 122 PANTHER PTHR34299:SF1 10 122 7.2E-29 T 20-04-2016 APS56_RS02430 c17a2a16b6fc0ff316c957ecce8662e0 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 17 116 6.2E-34 T 20-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APS56_RS14550 4787cf9a459a0f7838ab5c99012c299f 374 PANTHER PTHR19328 42 361 1.4E-57 T 20-04-2016 APS56_RS14550 4787cf9a459a0f7838ab5c99012c299f 374 Gene3D G3DSA:2.120.10.30 15 373 2.6E-96 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS14550 4787cf9a459a0f7838ab5c99012c299f 374 Pfam PF07995 Glucose / Sorbosone dehydrogenase 45 364 1.6E-127 T 20-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 APS56_RS14550 4787cf9a459a0f7838ab5c99012c299f 374 SUPERFAMILY SSF50952 36 369 3.14E-41 T 20-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 SUPERFAMILY SSF52374 28 347 1.1E-86 T 20-04-2016 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 341 525 1.8E-58 T 20-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 29 547 1.1E-214 T 20-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 PANTHER PTHR11451:SF29 268 579 1.7E-210 T 20-04-2016 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 PANTHER PTHR11451:SF29 9 246 1.7E-210 T 20-04-2016 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 PANTHER PTHR11451 268 579 1.7E-210 T 20-04-2016 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 PANTHER PTHR11451 9 246 1.7E-210 T 20-04-2016 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 Gene3D G3DSA:1.10.1160.10 264 340 7.7E-37 T 20-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 Gene3D G3DSA:2.40.240.10 457 543 6.3E-33 T 20-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 Gene3D G3DSA:3.90.800.10 100 208 1.0E-42 T 20-04-2016 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 SUPERFAMILY SSF50715 341 544 4.55E-69 T 20-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 Gene3D G3DSA:2.40.240.10 349 456 1.7E-39 T 20-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 27 338 3.4E-94 T 20-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 Gene3D G3DSA:3.40.50.620 211 263 9.2E-33 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 Gene3D G3DSA:3.40.50.620 28 96 9.2E-33 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS11020 5d20d41ae951f1a48a5701f36476410b 669 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS06700 45ac7f7a77f64ac59518697e9446d21c 360 PANTHER PTHR12526:SF1 340 346 1.6E-34 T 20-04-2016 APS56_RS06700 45ac7f7a77f64ac59518697e9446d21c 360 PANTHER PTHR12526:SF1 157 291 1.6E-34 T 20-04-2016 APS56_RS06700 45ac7f7a77f64ac59518697e9446d21c 360 Gene3D G3DSA:3.90.550.10 4 273 5.2E-78 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS06700 45ac7f7a77f64ac59518697e9446d21c 360 SUPERFAMILY SSF159283 286 352 1.96E-13 T 20-04-2016 APS56_RS06700 45ac7f7a77f64ac59518697e9446d21c 360 SUPERFAMILY SSF53448 5 281 1.89E-61 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS06700 45ac7f7a77f64ac59518697e9446d21c 360 PANTHER PTHR12526 340 346 1.6E-34 T 20-04-2016 APS56_RS06700 45ac7f7a77f64ac59518697e9446d21c 360 PANTHER PTHR12526 157 291 1.6E-34 T 20-04-2016 APS56_RS06700 45ac7f7a77f64ac59518697e9446d21c 360 Pfam PF00483 Nucleotidyl transferase 8 287 2.8E-47 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APS56_RS02540 eda25128761338856a1077363d6e14d3 138 PANTHER PTHR36503:SF2 2 134 2.9E-16 T 20-04-2016 APS56_RS02540 eda25128761338856a1077363d6e14d3 138 Gene3D G3DSA:3.10.180.10 2 135 6.0E-20 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02540 eda25128761338856a1077363d6e14d3 138 SUPERFAMILY SSF54593 4 135 1.23E-17 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02540 eda25128761338856a1077363d6e14d3 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 131 1.8E-7 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS56_RS02540 eda25128761338856a1077363d6e14d3 138 PANTHER PTHR36503 2 134 2.9E-16 T 20-04-2016 APS56_RS06860 eda25128761338856a1077363d6e14d3 138 PANTHER PTHR36503:SF2 2 134 2.9E-16 T 20-04-2016 APS56_RS06860 eda25128761338856a1077363d6e14d3 138 Gene3D G3DSA:3.10.180.10 2 135 6.0E-20 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06860 eda25128761338856a1077363d6e14d3 138 SUPERFAMILY SSF54593 4 135 1.23E-17 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06860 eda25128761338856a1077363d6e14d3 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 131 1.8E-7 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS56_RS06860 eda25128761338856a1077363d6e14d3 138 PANTHER PTHR36503 2 134 2.9E-16 T 20-04-2016 APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 SUPERFAMILY SSF51206 149 271 1.83E-31 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 Gene3D G3DSA:2.60.120.10 148 270 2.6E-27 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 Pfam PF00072 Response regulator receiver domain 4 116 1.9E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 Pfam PF13545 Crp-like helix-turn-helix domain 283 350 2.3E-13 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 SUPERFAMILY SSF46785 278 350 4.36E-13 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 Pfam PF00027 Cyclic nucleotide-binding domain 162 248 6.6E-16 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 SMART SM00419 295 343 7.9E-8 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 SMART SM00448 2 115 1.2E-35 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 SMART SM00100 135 263 2.9E-8 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 301 317 4.7E-6 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 317 332 4.7E-6 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 Gene3D G3DSA:1.10.10.10 277 350 4.1E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 Gene3D G3DSA:3.40.50.2300 2 129 1.1E-35 T 20-04-2016 APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 SUPERFAMILY SSF52172 1 137 5.27E-35 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS00615 e5cf8429d9b8a862031f907eca518146 351 PANTHER PTHR26402 2 127 1.7E-39 T 20-04-2016 APS56_RS09760 91954f09d0efec838fb9363eb99b6eed 774 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 38 272 3.1E-55 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS09760 91954f09d0efec838fb9363eb99b6eed 774 PIRSF PIRSF007663 10 774 1.4E-265 T 20-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 APS56_RS09760 91954f09d0efec838fb9363eb99b6eed 774 Gene3D G3DSA:2.70.98.50 37 403 2.4E-119 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS09760 91954f09d0efec838fb9363eb99b6eed 774 PANTHER PTHR31084 28 754 2.0E-277 T 20-04-2016 APS56_RS09760 91954f09d0efec838fb9363eb99b6eed 774 SUPERFAMILY SSF48208 274 743 2.52E-90 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS09760 91954f09d0efec838fb9363eb99b6eed 774 PANTHER PTHR31084:SF0 28 754 2.0E-277 T 20-04-2016 APS56_RS01695 64910e429e6db6f003678789194673ef 640 PANTHER PTHR30128 495 640 1.8E-27 T 20-04-2016 APS56_RS01695 64910e429e6db6f003678789194673ef 640 PRINTS PR01021 OMPA domain signature 575 591 2.0E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS01695 64910e429e6db6f003678789194673ef 640 PRINTS PR01021 OMPA domain signature 560 575 2.0E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS01695 64910e429e6db6f003678789194673ef 640 PRINTS PR01021 OMPA domain signature 529 551 2.0E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS01695 64910e429e6db6f003678789194673ef 640 SUPERFAMILY SSF82171 162 372 1.19E-10 T 20-04-2016 APS56_RS01695 64910e429e6db6f003678789194673ef 640 SUPERFAMILY SSF103088 516 636 7.06E-28 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01695 64910e429e6db6f003678789194673ef 640 SUPERFAMILY SSF48452 27 118 1.37E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01695 64910e429e6db6f003678789194673ef 640 Pfam PF07676 WD40-like Beta Propeller Repeat 379 416 0.13 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS01695 64910e429e6db6f003678789194673ef 640 Pfam PF07676 WD40-like Beta Propeller Repeat 284 310 0.11 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS01695 64910e429e6db6f003678789194673ef 640 Pfam PF07676 WD40-like Beta Propeller Repeat 224 237 0.24 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS01695 64910e429e6db6f003678789194673ef 640 Gene3D G3DSA:2.130.10.10 167 407 5.3E-8 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS01695 64910e429e6db6f003678789194673ef 640 Gene3D G3DSA:3.30.1330.60 521 638 5.7E-32 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01695 64910e429e6db6f003678789194673ef 640 Pfam PF13620 Carboxypeptidase regulatory-like domain 426 489 3.5E-8 T 20-04-2016 APS56_RS01695 64910e429e6db6f003678789194673ef 640 Gene3D G3DSA:1.25.40.10 26 116 1.3E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01695 64910e429e6db6f003678789194673ef 640 SUPERFAMILY SSF49464 426 493 2.2E-7 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS01695 64910e429e6db6f003678789194673ef 640 Gene3D G3DSA:2.60.40.1120 426 514 9.5E-8 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS01695 64910e429e6db6f003678789194673ef 640 Pfam PF00691 OmpA family 528 619 2.9E-19 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 Gene3D G3DSA:2.40.110.10 144 239 6.8E-35 T 20-04-2016 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 28 141 8.3E-30 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 PANTHER PTHR10909 19 436 9.4E-148 T 20-04-2016 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 Gene3D G3DSA:1.10.540.10 11 142 9.1E-35 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 PANTHER PTHR10909:SF320 19 436 9.4E-148 T 20-04-2016 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 145 239 2.9E-24 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 Gene3D G3DSA:1.20.140.10 240 423 1.1E-57 T 20-04-2016 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 413 1.3E-34 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 SUPERFAMILY SSF47203 250 422 2.09E-41 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 147 159 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APS56_RS07805 132eaa456f6f835382bb607b68f659bf 597 SUPERFAMILY SSF56645 19 263 1.02E-74 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APS56_RS10350 436cbb86e5f98ee1fb24bb391545ca0d 330 PIRSF PIRSF000346 2 327 6.4E-114 T 20-04-2016 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 UniPathway: UPA00199 APS56_RS10350 436cbb86e5f98ee1fb24bb391545ca0d 330 Pfam PF03405 Fatty acid desaturase 7 324 2.4E-138 T 20-04-2016 IPR005067 Fatty acid desaturase, type 2 GO:0006631|GO:0045300|GO:0055114 UniPathway: UPA00199 APS56_RS10350 436cbb86e5f98ee1fb24bb391545ca0d 330 SUPERFAMILY SSF47240 1 326 1.71E-108 T 20-04-2016 IPR009078 Ferritin-like superfamily APS56_RS10350 436cbb86e5f98ee1fb24bb391545ca0d 330 Gene3D G3DSA:1.10.620.20 1 325 8.9E-130 T 20-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APS56_RS10350 436cbb86e5f98ee1fb24bb391545ca0d 330 PANTHER PTHR31155 2 311 2.3E-148 T 20-04-2016 APS56_RS10350 436cbb86e5f98ee1fb24bb391545ca0d 330 PANTHER PTHR31155:SF9 2 311 2.3E-148 T 20-04-2016 APS56_RS03070 c20e9cdcf0beb5780621da369abe32e1 356 Pfam PF06452 Carbohydrate family 9 binding domain-like 42 191 7.3E-11 T 20-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 APS56_RS03070 c20e9cdcf0beb5780621da369abe32e1 356 PANTHER PTHR35532 26 147 8.2E-36 T 20-04-2016 APS56_RS03070 c20e9cdcf0beb5780621da369abe32e1 356 SUPERFAMILY SSF49344 31 262 4.32E-42 T 20-04-2016 APS56_RS03070 c20e9cdcf0beb5780621da369abe32e1 356 Gene3D G3DSA:2.60.40.1190 31 263 7.3E-50 T 20-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 APS56_RS03070 c20e9cdcf0beb5780621da369abe32e1 356 ProDom PD004647 DEGRADATION HYDROLASE GLYCOSIDASE XYLAN A XYLANASE PRECURSOR SIGNAL REPEAT 14- 41 188 9.0E-6 T 20-04-2016 APS56_RS03070 c20e9cdcf0beb5780621da369abe32e1 356 PANTHER PTHR35532:SF1 26 147 8.2E-36 T 20-04-2016 APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 Gene3D G3DSA:1.20.5.710 6 50 2.8E-8 T 20-04-2016 APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 7.1E-13 T 20-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 22.186 T 20-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 SUPERFAMILY SSF54736 54 124 1.74E-23 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 SUPERFAMILY SSF48300 3 60 3.4E-12 T 20-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 4.6E-29 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 60 105 4.0E-12 T 20-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 Gene3D G3DSA:3.30.1390.10 52 124 2.2E-31 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APS56_RS05535 b479dc2f1b8fe5ac23a27313ce37638d 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 3.6E-38 T 20-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 Pfam PF01595 Domain of unknown function DUF21 27 203 3.1E-39 T 20-04-2016 IPR002550 Domain of unknown function DUF21 APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 SMART SM01091 351 434 1.1E-14 T 20-04-2016 IPR005170 Transporter-associated domain APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 Gene3D G3DSA:3.10.580.10 204 345 2.6E-15 T 20-04-2016 APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 SUPERFAMILY SSF54631 213 352 5.25E-31 T 20-04-2016 APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 Pfam PF00571 CBS domain 220 275 9.1E-4 T 20-04-2016 IPR000644 CBS domain APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 Pfam PF00571 CBS domain 287 336 1.2E-6 T 20-04-2016 IPR000644 CBS domain APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 SUPERFAMILY SSF56176 351 433 1.69E-16 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 PANTHER PTHR22777 12 433 7.7E-110 T 20-04-2016 APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 Gene3D G3DSA:3.30.465.10 346 432 1.5E-20 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 TIGRFAM TIGR03520 GldE: gliding motility-associated protein GldE 27 433 5.7E-202 T 20-04-2016 IPR019862 Gliding motility-associated protein GldE APS56_RS11890 2db69ecb6b85095b1fc59985783b45d3 434 Pfam PF03471 Transporter associated domain 352 433 3.2E-17 T 20-04-2016 IPR005170 Transporter-associated domain APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SMART SM00955 260 617 2.1E-144 T 20-04-2016 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 Pfam PF00575 S1 RNA binding domain 658 740 2.2E-10 T 20-04-2016 IPR003029 S1 domain GO:0003676 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 Pfam PF08206 Ribonuclease B OB domain 158 213 6.1E-10 T 20-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 Pfam PF08206 Ribonuclease B OB domain 85 142 8.3E-11 T 20-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 ProSitePatterns PS01175 Ribonuclease II family signature. 584 608 - T 20-04-2016 IPR022966 Ribonuclease II/R, conserved site APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 PANTHER PTHR23355:SF9 27 742 6.7E-217 T 20-04-2016 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 Gene3D G3DSA:2.40.50.140 663 740 1.9E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 PANTHER PTHR23355 27 742 6.7E-217 T 20-04-2016 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 Pfam PF00773 RNB domain 260 616 2.9E-107 T 20-04-2016 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SMART SM00357 151 214 2.9E-4 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SMART SM00357 84 143 1.9E-5 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SUPERFAMILY SSF50249 431 526 1.75E-133 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SUPERFAMILY SSF50249 187 394 1.75E-133 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SUPERFAMILY SSF50249 563 659 1.75E-133 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SUPERFAMILY SSF50249 662 741 8.95E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 81 742 2.6E-154 T 20-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 Hamap MF_01895 Ribonuclease R [rnr]. 36 742 50.492 T 20-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SMART SM00316 659 742 2.2E-7 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS10980 601d89c880edf4c9e1831b877d2b7a66 747 SUPERFAMILY SSF50249 77 216 6.0E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 Gene3D G3DSA:1.10.287.80 233 279 1.6E-27 T 20-04-2016 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 Gene3D G3DSA:3.40.1380.10 67 190 1.3E-38 T 20-04-2016 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 SUPERFAMILY SSF52943 2 284 4.84E-82 T 20-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 Pfam PF00231 ATP synthase 3 284 2.8E-92 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 284 2.3E-94 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 284 32.841 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 Gene3D G3DSA:1.10.287.80 19 60 1.3E-29 T 20-04-2016 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 Gene3D G3DSA:1.10.287.80 199 232 1.3E-29 T 20-04-2016 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 PANTHER PTHR11693 1 286 5.2E-111 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 270 283 - T 20-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 PRINTS PR00126 ATP synthase gamma subunit signature 231 250 2.8E-34 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 2.8E-34 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 PRINTS PR00126 ATP synthase gamma subunit signature 262 283 2.8E-34 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS10655 877c8a321598213f5f1284c5a597b6bf 286 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 2.8E-34 T 20-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS01120 cf78ef27876fafbf5d9385c25828601f 217 Pfam PF00578 AhpC/TSA family 45 192 1.3E-30 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS01120 cf78ef27876fafbf5d9385c25828601f 217 PANTHER PTHR10681 40 150 1.5E-45 T 20-04-2016 APS56_RS01120 cf78ef27876fafbf5d9385c25828601f 217 PANTHER PTHR10681 173 215 1.5E-45 T 20-04-2016 APS56_RS01120 cf78ef27876fafbf5d9385c25828601f 217 SUPERFAMILY SSF52833 42 215 1.16E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS01120 cf78ef27876fafbf5d9385c25828601f 217 Gene3D G3DSA:3.40.30.10 31 215 2.4E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS01120 cf78ef27876fafbf5d9385c25828601f 217 PANTHER PTHR10681:SF70 40 150 1.5E-45 T 20-04-2016 APS56_RS01120 cf78ef27876fafbf5d9385c25828601f 217 PANTHER PTHR10681:SF70 173 215 1.5E-45 T 20-04-2016 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 2.6E-32 T 20-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 199 3.1E-57 T 20-04-2016 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 58.075 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 SUPERFAMILY SSF52540 6 219 1.08E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 Gene3D G3DSA:3.40.50.300 6 211 5.8E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 SUPERFAMILY SSF50465 303 395 1.22E-35 T 20-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 145 4.3E-14 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 1.7E-15 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 PANTHER PTHR23115:SF112 1 393 1.4E-237 T 20-04-2016 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 Gene3D G3DSA:2.40.30.10 301 394 1.2E-44 T 20-04-2016 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 Gene3D G3DSA:2.40.30.10 212 299 5.2E-34 T 20-04-2016 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 2.5E-216 T 20-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.2E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 2.2E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 2.2E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 2.2E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 2.2E-25 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 PANTHER PTHR23115 1 393 1.4E-237 T 20-04-2016 APS56_RS05570 89e2a28071ecbdaed8a661bce495bb9c 395 SUPERFAMILY SSF50447 205 302 2.91E-28 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS08165 8326cb8b053599b1e214a9bad96b51ab 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 6 185 24.829 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APS56_RS08165 8326cb8b053599b1e214a9bad96b51ab 185 Gene3D G3DSA:1.10.132.20 69 185 1.1E-38 T 20-04-2016 IPR023584 Ribosome recycling factor domain APS56_RS08165 8326cb8b053599b1e214a9bad96b51ab 185 PANTHER PTHR20982 3 185 2.5E-70 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APS56_RS08165 8326cb8b053599b1e214a9bad96b51ab 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 13 185 6.8E-62 T 20-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APS56_RS08165 8326cb8b053599b1e214a9bad96b51ab 185 SUPERFAMILY SSF55194 6 184 9.16E-66 T 20-04-2016 IPR023584 Ribosome recycling factor domain APS56_RS08165 8326cb8b053599b1e214a9bad96b51ab 185 Pfam PF01765 Ribosome recycling factor 23 183 1.4E-59 T 20-04-2016 IPR023584 Ribosome recycling factor domain APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 PANTHER PTHR11609:SF5 10 370 7.0E-120 T 20-04-2016 APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 PANTHER PTHR11609 10 370 7.0E-120 T 20-04-2016 APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 SUPERFAMILY SSF51246 311 381 4.87E-13 T 20-04-2016 IPR011054 Rudiment single hybrid motif APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 365 36.287 T 20-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 Gene3D G3DSA:3.40.50.20 4 113 1.8E-31 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 Gene3D G3DSA:3.30.470.20 149 381 1.0E-74 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 SUPERFAMILY SSF52440 5 102 5.32E-22 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 Pfam PF02222 ATP-grasp domain 116 283 7.6E-42 T 20-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 10 368 8.0E-110 T 20-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APS56_RS06560 7d667da46d339f9ae53907762fed2e54 384 SUPERFAMILY SSF56059 106 303 1.63E-46 T 20-04-2016 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Pfam PF00271 Helicase conserved C-terminal domain 226 331 7.9E-17 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 SMART SM00487 17 217 3.5E-33 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Pfam PF00270 DEAD/DEAH box helicase 24 188 5.4E-20 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Gene3D G3DSA:1.10.10.10 345 520 1.6E-40 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 PANTHER PTHR13710 5 734 1.3E-230 T 20-04-2016 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Gene3D G3DSA:3.40.50.300 6 203 6.7E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Gene3D G3DSA:3.40.50.300 206 344 1.1E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 SUPERFAMILY SSF47819 540 616 8.29E-22 T 20-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 11 465 4.2E-147 T 20-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 SUPERFAMILY SSF52540 60 350 5.64E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Pfam PF16124 RecQ zinc-binding 342 395 9.8E-7 T 20-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Pfam PF09382 RQC domain 410 517 5.5E-20 T 20-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Pfam PF00570 HRDC domain 543 607 4.3E-17 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 SMART SM00956 414 517 2.1E-17 T 20-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 SMART SM00341 537 617 7.4E-16 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 SUPERFAMILY SSF46785 405 525 1.01E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 PANTHER PTHR13710:SF81 5 734 1.3E-230 T 20-04-2016 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 Gene3D G3DSA:1.10.150.80 542 614 2.0E-17 T 20-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APS56_RS05175 cc2df0439de77aacc8a111f324fca4b5 734 SMART SM00490 250 331 5.2E-25 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 Pfam PF00120 Glutamine synthetase, catalytic domain 101 236 3.3E-14 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 SUPERFAMILY SSF54368 37 91 6.54E-7 T 20-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 5 84 3.3E-11 T 20-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 SUPERFAMILY SSF55931 99 334 2.26E-54 T 20-04-2016 APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 SMART SM01230 91 335 1.1E-42 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 PANTHER PTHR20852 1 335 6.1E-148 T 20-04-2016 APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 ProSitePatterns PS00180 Glutamine synthetase signature 1. 44 61 - T 20-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 Gene3D G3DSA:3.30.590.10 102 333 3.1E-51 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APS56_RS05075 6a0ea7f179e5914e662d4e1a292e588d 339 PANTHER PTHR20852:SF14 1 335 6.1E-148 T 20-04-2016 APS56_RS03870 acbe307ec4f953fe63a4f43ed78f104e 231 SMART SM00448 3 111 2.0E-15 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS03870 acbe307ec4f953fe63a4f43ed78f104e 231 Pfam PF04397 LytTr DNA-binding domain 142 228 2.6E-19 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS03870 acbe307ec4f953fe63a4f43ed78f104e 231 SMART SM00850 138 229 1.8E-23 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS03870 acbe307ec4f953fe63a4f43ed78f104e 231 PANTHER PTHR26402 3 120 3.3E-24 T 20-04-2016 APS56_RS03870 acbe307ec4f953fe63a4f43ed78f104e 231 Gene3D G3DSA:2.40.50.40 130 198 3.4E-22 T 20-04-2016 APS56_RS03870 acbe307ec4f953fe63a4f43ed78f104e 231 SUPERFAMILY SSF52172 4 126 8.68E-25 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS03870 acbe307ec4f953fe63a4f43ed78f104e 231 Pfam PF00072 Response regulator receiver domain 6 107 2.2E-18 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS03870 acbe307ec4f953fe63a4f43ed78f104e 231 Gene3D G3DSA:3.40.50.2300 2 121 8.2E-25 T 20-04-2016 APS56_RS12720 ac503b1cbc7e720c23ee6530ea867bd2 248 PANTHER PTHR31321 142 233 3.2E-18 T 20-04-2016 APS56_RS12720 ac503b1cbc7e720c23ee6530ea867bd2 248 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 30 221 4.4E-16 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS12720 ac503b1cbc7e720c23ee6530ea867bd2 248 Gene3D G3DSA:3.40.50.1110 26 243 1.7E-71 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS12720 ac503b1cbc7e720c23ee6530ea867bd2 248 SUPERFAMILY SSF52266 24 237 5.5E-48 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS06375 dd9f3928a4d53496a967d11daa6184ab 153 Pfam PF13673 Acetyltransferase (GNAT) domain 39 135 2.9E-10 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS06375 dd9f3928a4d53496a967d11daa6184ab 153 Gene3D G3DSA:3.40.630.30 4 149 8.0E-20 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS06375 dd9f3928a4d53496a967d11daa6184ab 153 PANTHER PTHR13355:SF8 1 152 2.2E-14 T 20-04-2016 APS56_RS06375 dd9f3928a4d53496a967d11daa6184ab 153 SUPERFAMILY SSF55729 27 147 4.43E-18 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS06375 dd9f3928a4d53496a967d11daa6184ab 153 PANTHER PTHR13355 1 152 2.2E-14 T 20-04-2016 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 PANTHER PTHR37840:SF1 1 588 1.3E-223 T 20-04-2016 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 3 587 0.0 T 20-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 SUPERFAMILY SSF53743 4 353 3.4E-138 T 20-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 Hamap MF_01254 L-fucose isomerase [fucI]. 1 589 67.295 T 20-04-2016 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 SUPERFAMILY SSF50443 354 588 5.75E-124 T 20-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 Gene3D G3DSA:3.40.50.1070 3 173 6.4E-88 T 20-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 173 352 1.2E-92 T 20-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 Gene3D G3DSA:3.40.275.10 174 337 4.8E-78 T 20-04-2016 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 388 552 5.3E-53 T 20-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 Gene3D G3DSA:3.20.14.10 339 587 1.0E-126 T 20-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 PANTHER PTHR37840 1 588 1.3E-223 T 20-04-2016 APS56_RS15060 879f1280ccdbc04f4a93b6a69ccf863c 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 5 172 1.5E-78 T 20-04-2016 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APS56_RS08620 1e41ff9b812721d67342cd9bd80167cd 76 PANTHER PTHR10245:SF9 2 72 1.0E-11 T 20-04-2016 APS56_RS08620 1e41ff9b812721d67342cd9bd80167cd 76 SMART SM00530 15 70 1.5E-13 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS08620 1e41ff9b812721d67342cd9bd80167cd 76 Gene3D G3DSA:1.10.260.40 3 73 1.6E-20 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS08620 1e41ff9b812721d67342cd9bd80167cd 76 PANTHER PTHR10245 2 72 1.0E-11 T 20-04-2016 APS56_RS08620 1e41ff9b812721d67342cd9bd80167cd 76 SUPERFAMILY SSF47413 8 72 1.1E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS08620 1e41ff9b812721d67342cd9bd80167cd 76 Pfam PF01381 Helix-turn-helix 16 70 2.3E-14 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 86 8.3E-11 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 SUPERFAMILY SSF53383 123 493 1.64E-57 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 SMART SM00345 27 86 6.5E-10 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 Gene3D G3DSA:1.10.10.10 14 86 2.6E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 Gene3D G3DSA:3.90.1150.10 374 483 4.3E-7 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 SUPERFAMILY SSF46785 16 90 3.33E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 PANTHER PTHR11751:SF10 113 491 1.7E-50 T 20-04-2016 APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 Gene3D G3DSA:3.40.640.10 181 373 4.4E-39 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS11705 477ce41bbdc0777153e63d346983fb80 500 PANTHER PTHR11751 113 491 1.7E-50 T 20-04-2016 APS56_RS14735 d35be36727f6e0ea7891dc3a0c52342d 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 175 3.5E-30 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14735 d35be36727f6e0ea7891dc3a0c52342d 182 Gene3D G3DSA:1.10.1740.10 4 113 9.5E-26 T 20-04-2016 APS56_RS14735 d35be36727f6e0ea7891dc3a0c52342d 182 Pfam PF08281 Sigma-70, region 4 128 174 2.5E-12 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14735 d35be36727f6e0ea7891dc3a0c52342d 182 SUPERFAMILY SSF88946 3 95 6.28E-21 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14735 d35be36727f6e0ea7891dc3a0c52342d 182 SUPERFAMILY SSF88659 110 178 1.01E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14735 d35be36727f6e0ea7891dc3a0c52342d 182 PANTHER PTHR30173 5 182 5.1E-39 T 20-04-2016 APS56_RS14735 d35be36727f6e0ea7891dc3a0c52342d 182 Gene3D G3DSA:1.10.10.10 117 178 1.9E-14 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS14735 d35be36727f6e0ea7891dc3a0c52342d 182 Pfam PF04542 Sigma-70 region 2 28 87 7.5E-9 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 8.9E-53 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 8.9E-53 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 8.9E-53 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 8.9E-53 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 8.9E-53 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 8.9E-53 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 283 44.206 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 SUPERFAMILY SSF53328 89 284 4.06E-57 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 1.2E-113 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PANTHER PTHR10520 7 277 8.4E-133 T 20-04-2016 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 Pfam PF00551 Formyl transferase 89 265 2.1E-36 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 Pfam PF01842 ACT domain 5 48 1.1E-6 T 20-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 SUPERFAMILY SSF55021 3 85 5.24E-12 T 20-04-2016 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PIRSF PIRSF036480 1 284 1.2E-113 T 20-04-2016 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 Gene3D G3DSA:3.40.50.170 87 280 4.5E-55 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 PANTHER PTHR10520:SF7 7 277 8.4E-133 T 20-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APS56_RS04495 d34f067b01f069eea74de29797974b3d 284 Gene3D G3DSA:3.30.70.260 1 82 3.9E-16 T 20-04-2016 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 PANTHER PTHR10342:SF237 9 243 3.3E-159 T 20-04-2016 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 PANTHER PTHR10342:SF237 279 531 3.3E-159 T 20-04-2016 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 PANTHER PTHR10342 9 243 3.3E-159 T 20-04-2016 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 PANTHER PTHR10342 279 531 3.3E-159 T 20-04-2016 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 Gene3D G3DSA:3.30.1120.10 411 508 2.2E-12 T 20-04-2016 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 ProSitePatterns PS00149 Sulfatases signature 2. 128 138 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 Pfam PF16347 Domain of unknown function (DUF4976) 401 511 6.6E-21 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 Gene3D G3DSA:3.40.720.10 34 410 1.6E-102 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 ProSitePatterns PS00523 Sulfatases signature 1. 86 98 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 SUPERFAMILY SSF53649 35 513 1.6E-116 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS03010 76ff1828e60a6f49183a88fe19487154 531 Pfam PF00884 Sulfatase 37 398 3.9E-55 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 Gene3D G3DSA:3.50.50.60 6 108 6.2E-21 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 Gene3D G3DSA:3.50.50.60 109 338 3.3E-29 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 300 307 1.2E-9 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 162 187 1.2E-9 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.2E-9 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 329 1.3E-47 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 SUPERFAMILY SSF51905 10 344 6.91E-32 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.5E-14 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.5E-14 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 285 307 1.5E-14 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 1.5E-14 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PANTHER PTHR22912 1 144 2.9E-23 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PANTHER PTHR22912 198 337 2.9E-23 T 20-04-2016 APS56_RS03290 b4c897ba5766539a91d7e5acde62cbf7 427 PANTHER PTHR22912 161 182 2.9E-23 T 20-04-2016 APS56_RS05360 e0e11f0bb749280494d1c18cce5a99dc 235 PANTHER PTHR10108 13 168 7.2E-18 T 20-04-2016 APS56_RS05360 e0e11f0bb749280494d1c18cce5a99dc 235 Pfam PF08241 Methyltransferase domain 41 130 1.1E-16 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APS56_RS05360 e0e11f0bb749280494d1c18cce5a99dc 235 Gene3D G3DSA:3.40.50.150 30 199 8.4E-31 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS05360 e0e11f0bb749280494d1c18cce5a99dc 235 SUPERFAMILY SSF53335 24 212 5.95E-29 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 SUPERFAMILY SSF53649 21 464 1.45E-106 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 Pfam PF00884 Sulfatase 23 357 1.7E-65 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 PANTHER PTHR10342:SF199 6 132 1.3E-124 T 20-04-2016 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 PANTHER PTHR10342:SF199 303 490 1.3E-124 T 20-04-2016 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 PANTHER PTHR10342:SF199 163 287 1.3E-124 T 20-04-2016 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 Gene3D G3DSA:3.30.1120.10 374 461 2.2E-16 T 20-04-2016 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 PANTHER PTHR10342 6 132 1.3E-124 T 20-04-2016 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 PANTHER PTHR10342 303 490 1.3E-124 T 20-04-2016 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 PANTHER PTHR10342 163 287 1.3E-124 T 20-04-2016 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 Gene3D G3DSA:3.40.720.10 20 373 1.5E-95 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 Pfam PF16385 Domain of unknown function 364 460 1.3E-11 T 20-04-2016 IPR032158 Domain of unknown function DUF4994 APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 ProSitePatterns PS00149 Sulfatases signature 2. 121 131 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS02960 64a5fa599041807b0b084cf9a9287cbd 495 ProSitePatterns PS00523 Sulfatases signature 1. 71 83 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 SUPERFAMILY SSF46548 547 643 4.97E-11 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 Gene3D G3DSA:1.10.1060.10 499 653 5.2E-16 T 20-04-2016 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 Pfam PF02913 FAD linked oxidases, C-terminal domain 274 522 2.4E-42 T 20-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 SUPERFAMILY SSF55103 279 524 3.6E-44 T 20-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 Gene3D G3DSA:3.30.43.10 2 87 7.2E-18 T 20-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 Pfam PF13183 4Fe-4S dicluster domain 559 638 4.6E-9 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 624 635 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 SUPERFAMILY SSF56176 4 273 1.68E-52 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 Pfam PF01565 FAD binding domain 37 173 2.4E-35 T 20-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 PANTHER PTHR11748 1 180 5.4E-108 T 20-04-2016 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 PANTHER PTHR11748 238 571 5.4E-108 T 20-04-2016 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 PANTHER PTHR11748:SF35 1 180 5.4E-108 T 20-04-2016 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 PANTHER PTHR11748:SF35 238 571 5.4E-108 T 20-04-2016 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 Gene3D G3DSA:3.30.465.10 216 273 3.3E-35 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APS56_RS02365 f6b9484ebf68ccd76b79dd5f3cd71825 971 Gene3D G3DSA:3.30.465.10 92 181 3.3E-35 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APS56_RS02175 1aed406cc9c9fafd6ada7bc1d33f5d75 296 SUPERFAMILY SSF53448 4 228 9.14E-26 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS02175 1aed406cc9c9fafd6ada7bc1d33f5d75 296 Pfam PF00535 Glycosyl transferase family 2 5 106 2.6E-17 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS02175 1aed406cc9c9fafd6ada7bc1d33f5d75 296 Gene3D G3DSA:3.90.550.10 3 124 4.3E-24 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS02175 1aed406cc9c9fafd6ada7bc1d33f5d75 296 PANTHER PTHR22916 4 105 2.2E-17 T 20-04-2016 APS56_RS13210 8f7d16236d972aae7a7a50e27f34068b 234 PANTHER PTHR34300:SF2 7 231 2.5E-45 T 20-04-2016 APS56_RS13210 8f7d16236d972aae7a7a50e27f34068b 234 Pfam PF02592 Putative vitamin uptake transporter 54 214 2.1E-46 T 20-04-2016 IPR003744 Protein of unknown function DUF165 APS56_RS13210 8f7d16236d972aae7a7a50e27f34068b 234 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 19 221 5.2E-41 T 20-04-2016 IPR003744 Protein of unknown function DUF165 APS56_RS13210 8f7d16236d972aae7a7a50e27f34068b 234 PANTHER PTHR34300 7 231 2.5E-45 T 20-04-2016 APS56_RS03000 35641b634e719e381026edd5798bf18d 590 Gene3D G3DSA:3.40.720.10 28 380 8.3E-110 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS03000 35641b634e719e381026edd5798bf18d 590 ProSitePatterns PS00523 Sulfatases signature 1. 76 88 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS03000 35641b634e719e381026edd5798bf18d 590 SUPERFAMILY SSF53649 30 459 1.3E-124 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS03000 35641b634e719e381026edd5798bf18d 590 ProSitePatterns PS00149 Sulfatases signature 2. 121 131 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS03000 35641b634e719e381026edd5798bf18d 590 PANTHER PTHR10342 2 484 2.0E-145 T 20-04-2016 APS56_RS03000 35641b634e719e381026edd5798bf18d 590 PANTHER PTHR10342:SF199 2 484 2.0E-145 T 20-04-2016 APS56_RS03000 35641b634e719e381026edd5798bf18d 590 Pfam PF00884 Sulfatase 31 358 2.2E-65 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS03000 35641b634e719e381026edd5798bf18d 590 Gene3D G3DSA:3.30.1120.10 400 460 5.0E-11 T 20-04-2016 APS56_RS15240 a45eba82bca15b82b7b27dfdbbadad66 98 SUPERFAMILY SSF55729 6 93 3.6E-15 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS15240 a45eba82bca15b82b7b27dfdbbadad66 98 Gene3D G3DSA:3.40.630.30 9 92 1.2E-12 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS15240 a45eba82bca15b82b7b27dfdbbadad66 98 Pfam PF14542 GCN5-related N-acetyl-transferase 15 90 3.8E-13 T 20-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 PRINTS PR00453 Von Willebrand factor type A domain signature 92 109 1.1E-5 T 20-04-2016 APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 PRINTS PR00453 Von Willebrand factor type A domain signature 194 202 1.1E-5 T 20-04-2016 APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 PRINTS PR00453 Von Willebrand factor type A domain signature 132 146 1.1E-5 T 20-04-2016 APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 SMART SM00327 91 264 1.2E-22 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 Pfam PF00092 von Willebrand factor type A domain 93 285 2.9E-32 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 PANTHER PTHR22550:SF8 15 327 8.1E-71 T 20-04-2016 APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 Pfam PF07584 Aerotolerance regulator N-terminal 5 77 2.1E-15 T 20-04-2016 IPR024163 Aerotolerance regulator, N-terminal APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 Gene3D G3DSA:3.40.50.410 89 289 2.3E-32 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 SUPERFAMILY SSF53300 90 288 1.93E-38 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11520 4a4982996ac99c64df233cdec5b117c8 333 PANTHER PTHR22550 15 327 8.1E-71 T 20-04-2016 APS56_RS14655 212466a2dc5d66274f0e7cf5ada8b6d8 160 ProSitePatterns PS01318 TsaA-like domain signature. 73 84 - T 20-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site APS56_RS14655 212466a2dc5d66274f0e7cf5ada8b6d8 160 Pfam PF01980 Uncharacterised protein family UPF0066 16 124 2.8E-20 T 20-04-2016 IPR023370 TsaA-like domain APS56_RS14655 212466a2dc5d66274f0e7cf5ada8b6d8 160 PANTHER PTHR12818 31 146 3.0E-15 T 20-04-2016 APS56_RS14655 212466a2dc5d66274f0e7cf5ada8b6d8 160 Gene3D G3DSA:2.40.30.70 17 141 5.3E-26 T 20-04-2016 IPR023370 TsaA-like domain APS56_RS14655 212466a2dc5d66274f0e7cf5ada8b6d8 160 SUPERFAMILY SSF118196 4 154 1.44E-32 T 20-04-2016 IPR023370 TsaA-like domain APS56_RS00080 06a1a5972670089f9c1ba537ff5efdf7 331 Pfam PF11751 Protein of unknown function (DUF3308) 19 314 3.8E-36 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS00080 06a1a5972670089f9c1ba537ff5efdf7 331 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 1 314 2.4E-58 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS11790 3d97c50b3391dc2c114cdda854423099 88 Gene3D G3DSA:2.10.110.10 26 49 4.3E-4 T 20-04-2016 IPR001781 Zinc finger, LIM-type GO:0008270 APS56_RS16415 0036c1ddb49986409d0b3d3d5232c419 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 193 23.113 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APS56_RS16415 0036c1ddb49986409d0b3d3d5232c419 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 182 1.8E-40 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APS56_RS16415 0036c1ddb49986409d0b3d3d5232c419 197 SUPERFAMILY SSF52540 1 180 5.05E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16415 0036c1ddb49986409d0b3d3d5232c419 197 PANTHER PTHR10695 1 192 3.3E-50 T 20-04-2016 APS56_RS16415 0036c1ddb49986409d0b3d3d5232c419 197 Gene3D G3DSA:3.40.50.300 1 195 1.2E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16415 0036c1ddb49986409d0b3d3d5232c419 197 Pfam PF01121 Dephospho-CoA kinase 2 173 8.4E-44 T 20-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 SUPERFAMILY SSF53474 630 883 4.02E-51 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 PANTHER PTHR11731 364 894 4.7E-91 T 20-04-2016 APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 Pfam PF00326 Prolyl oligopeptidase family 707 883 2.3E-28 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 Gene3D G3DSA:3.40.50.1820 634 884 2.6E-53 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 SUPERFAMILY SSF82171 38 261 5.49E-19 T 20-04-2016 APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 SUPERFAMILY SSF82171 443 513 5.49E-19 T 20-04-2016 APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 SUPERFAMILY SSF82171 567 617 5.49E-19 T 20-04-2016 APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 PANTHER PTHR11731:SF142 364 894 4.7E-91 T 20-04-2016 APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 Gene3D G3DSA:2.120.10.30 402 523 5.8E-11 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 Gene3D G3DSA:2.120.10.30 581 633 5.8E-11 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS02820 f833b82353d8a36d28d3dd38fa79131a 912 Gene3D G3DSA:2.120.10.30 41 275 1.6E-14 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 SUPERFAMILY SSF51215 28 97 5.89E-9 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 Pfam PF02311 AraC-like ligand binding domain 28 75 6.4E-6 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 PANTHER PTHR11019:SF45 16 265 8.8E-31 T 20-04-2016 APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 SUPERFAMILY SSF46689 224 270 2.11E-10 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 PANTHER PTHR11019 16 265 8.8E-31 T 20-04-2016 APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 Pfam PF12833 Helix-turn-helix domain 190 267 2.7E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 Gene3D G3DSA:2.60.120.280 28 126 2.7E-7 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 Gene3D G3DSA:1.10.10.60 223 269 1.8E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09340 5ae3a60729242a89f19340f8736c0dee 274 SMART SM00342 184 267 8.0E-13 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 SMART SM01274 19 152 2.5E-81 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 Pfam PF01515 Phosphate acetyl/butaryl transferase 431 748 1.0E-90 T 20-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 Gene3D G3DSA:3.40.50.720 162 448 1.4E-82 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 Gene3D G3DSA:3.40.50.10380 5 161 4.5E-53 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 PANTHER PTHR23406 372 447 2.0E-156 T 20-04-2016 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 PANTHER PTHR23406 32 355 2.0E-156 T 20-04-2016 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 Pfam PF00390 Malic enzyme, N-terminal domain 20 152 4.5E-29 T 20-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 SUPERFAMILY SSF53223 10 162 6.4E-54 T 20-04-2016 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 PIRSF PIRSF036684 1 756 0.0 T 20-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 SUPERFAMILY SSF51735 164 442 2.5E-83 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 PANTHER PTHR23406:SF23 372 447 2.0E-156 T 20-04-2016 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 PANTHER PTHR23406:SF23 32 355 2.0E-156 T 20-04-2016 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 SMART SM00919 164 400 9.2E-131 T 20-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 ProSitePatterns PS00331 Malic enzymes signature. 160 176 - T 20-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 Gene3D G3DSA:3.40.50.10750 565 724 2.8E-53 T 20-04-2016 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 Pfam PF03949 Malic enzyme, NAD binding domain 166 363 6.4E-22 T 20-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APS56_RS12975 fbfbcddf7989431ddf5896986a6f6e06 763 SUPERFAMILY SSF53659 430 752 1.15E-91 T 20-04-2016 APS56_RS11410 7e587983bb02ac9eec6e0b835b5d8eb4 187 PANTHER PTHR10520:SF9 1 186 5.1E-57 T 20-04-2016 APS56_RS11410 7e587983bb02ac9eec6e0b835b5d8eb4 187 Gene3D G3DSA:3.40.50.170 1 186 8.5E-49 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS11410 7e587983bb02ac9eec6e0b835b5d8eb4 187 PANTHER PTHR10520 1 186 5.1E-57 T 20-04-2016 APS56_RS11410 7e587983bb02ac9eec6e0b835b5d8eb4 187 Pfam PF00551 Formyl transferase 2 182 2.6E-40 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS11410 7e587983bb02ac9eec6e0b835b5d8eb4 187 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 20-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS11410 7e587983bb02ac9eec6e0b835b5d8eb4 187 SUPERFAMILY SSF53328 2 186 3.14E-47 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS12530 234c586678950df44b99dfdcd764afea 238 Pfam PF05175 Methyltransferase small domain 41 128 8.2E-12 T 20-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APS56_RS12530 234c586678950df44b99dfdcd764afea 238 PANTHER PTHR18895 25 228 7.8E-53 T 20-04-2016 APS56_RS12530 234c586678950df44b99dfdcd764afea 238 SUPERFAMILY SSF53335 7 168 1.39E-26 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS12530 234c586678950df44b99dfdcd764afea 238 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 4 238 51.707 T 20-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 APS56_RS12530 234c586678950df44b99dfdcd764afea 238 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 112 118 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APS56_RS12530 234c586678950df44b99dfdcd764afea 238 Gene3D G3DSA:3.40.50.150 25 231 2.1E-35 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS12530 234c586678950df44b99dfdcd764afea 238 PANTHER PTHR18895:SF73 25 228 7.8E-53 T 20-04-2016 APS56_RS12530 234c586678950df44b99dfdcd764afea 238 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 42 71 - T 20-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APS56_RS02290 ede6c0cb0b0917b4814d4341d493411b 150 SUPERFAMILY SSF52833 4 150 4.69E-48 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS02290 ede6c0cb0b0917b4814d4341d493411b 150 PANTHER PTHR10681 1 150 7.8E-46 T 20-04-2016 APS56_RS02290 ede6c0cb0b0917b4814d4341d493411b 150 Pfam PF00578 AhpC/TSA family 7 133 6.6E-39 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS02290 ede6c0cb0b0917b4814d4341d493411b 150 PIRSF PIRSF000239 1 144 2.2E-21 T 20-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APS56_RS02290 ede6c0cb0b0917b4814d4341d493411b 150 Gene3D G3DSA:3.40.30.10 3 150 2.3E-45 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 PANTHER PTHR11136:SF0 22 404 2.0E-111 T 20-04-2016 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 SUPERFAMILY SSF53244 279 405 8.01E-21 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 141 156 - T 20-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 PIRSF PIRSF001563 2 405 2.4E-107 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 Gene3D G3DSA:3.40.1190.10 1 272 1.5E-83 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 TIGRFAM TIGR01499 folC: bifunctional protein FolC 30 404 2.4E-105 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 PANTHER PTHR11136 22 404 2.0E-111 T 20-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 Pfam PF08245 Mur ligase middle domain 51 235 1.5E-15 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 Gene3D G3DSA:3.90.190.20 280 405 2.4E-25 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 SUPERFAMILY SSF53623 1 272 3.79E-82 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS13795 5fe7a113da0c370470aed5bf484aec8a 405 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 49 72 - T 20-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 SUPERFAMILY SSF56024 503 685 3.36E-71 T 20-04-2016 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 Pfam PF02503 Polyphosphate kinase middle domain 126 323 6.0E-47 T 20-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 SUPERFAMILY SSF140356 8 113 1.44E-32 T 20-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 Pfam PF13089 Polyphosphate kinase N-terminal domain 11 117 3.2E-34 T 20-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 11 678 1.1E-228 T 20-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 2.8E-140 T 20-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 Gene3D G3DSA:3.30.1840.10 113 304 3.3E-48 T 20-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 SUPERFAMILY SSF56024 321 492 5.49E-47 T 20-04-2016 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 Gene3D G3DSA:3.30.870.10 319 502 2.0E-62 T 20-04-2016 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 PANTHER PTHR30218 11 686 4.2E-272 T 20-04-2016 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 SUPERFAMILY SSF143724 114 317 7.65E-55 T 20-04-2016 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 PIRSF PIRSF015589 2 687 2.8E-230 T 20-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 PANTHER PTHR30218:SF0 11 686 4.2E-272 T 20-04-2016 APS56_RS01745 0ac1effea288809bee08703098260ce9 687 Gene3D G3DSA:3.30.870.10 503 684 1.1E-68 T 20-04-2016 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 Gene3D G3DSA:3.30.499.10 10 196 1.4E-69 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 ProSitePatterns PS00450 Aconitase family signature 1. 352 368 - T 20-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 Gene3D G3DSA:3.30.499.10 318 491 3.5E-51 T 20-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 SUPERFAMILY SSF52016 534 753 7.85E-59 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 Pfam PF00694 Aconitase C-terminal domain 559 686 9.3E-40 T 20-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 SUPERFAMILY SSF53732 5 525 3.14E-149 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 Gene3D G3DSA:3.20.19.10 538 753 2.6E-73 T 20-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PANTHER PTHR11670 12 756 0.0 T 20-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PRINTS PR00415 Aconitase family signature 227 240 3.6E-33 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PRINTS PR00415 Aconitase family signature 241 254 3.6E-33 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PRINTS PR00415 Aconitase family signature 151 164 3.6E-33 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PRINTS PR00415 Aconitase family signature 131 139 3.6E-33 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PRINTS PR00415 Aconitase family signature 356 367 3.6E-33 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PRINTS PR00415 Aconitase family signature 165 180 3.6E-33 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PRINTS PR00415 Aconitase family signature 415 428 3.6E-33 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PRINTS PR00415 Aconitase family signature 321 335 3.6E-33 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 TIGRFAM TIGR01340 aconitase_mito: aconitate hydratase, mitochondrial 12 750 0.0 T 20-04-2016 IPR006248 Aconitase, mitochondrial-like GO:0003994|GO:0006099|GO:0051539 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 Pfam PF00330 Aconitase family (aconitate hydratase) 34 479 4.4E-152 T 20-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 Gene3D G3DSA:3.40.1060.10 198 316 1.4E-38 T 20-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APS56_RS16615 9ef47bdfbeb5a504c0dfa86f7bd0a89a 756 PANTHER PTHR11670:SF30 12 756 0.0 T 20-04-2016 APS56_RS10440 d603b0369ea2a88fe3de2a509360b8ab 453 PIRSF PIRSF006603 1 451 8.4E-94 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS10440 d603b0369ea2a88fe3de2a509360b8ab 453 PANTHER PTHR11206:SF132 6 437 4.2E-127 T 20-04-2016 APS56_RS10440 d603b0369ea2a88fe3de2a509360b8ab 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 419 1.1E-55 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS10440 d603b0369ea2a88fe3de2a509360b8ab 453 PANTHER PTHR11206 6 437 4.2E-127 T 20-04-2016 APS56_RS10440 d603b0369ea2a88fe3de2a509360b8ab 453 Pfam PF01554 MatE 251 405 1.7E-21 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS10440 d603b0369ea2a88fe3de2a509360b8ab 453 Pfam PF01554 MatE 24 185 2.4E-27 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS13950 bad872e206454a4e25c4101154f425e5 209 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 2.6E-58 T 20-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APS56_RS13950 bad872e206454a4e25c4101154f425e5 209 Gene3D G3DSA:3.40.1370.10 58 207 7.7E-52 T 20-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APS56_RS13950 bad872e206454a4e25c4101154f425e5 209 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 3.4E-68 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APS56_RS13950 bad872e206454a4e25c4101154f425e5 209 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 208 29.676 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APS56_RS13950 bad872e206454a4e25c4101154f425e5 209 PANTHER PTHR10746 1 207 1.5E-71 T 20-04-2016 IPR013005 50S ribosomal protein uL4 APS56_RS13950 bad872e206454a4e25c4101154f425e5 209 SUPERFAMILY SSF52166 1 206 2.09E-67 T 20-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 PANTHER PTHR21299 6 282 2.4E-98 T 20-04-2016 APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 PANTHER PTHR21299:SF1 6 282 2.4E-98 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 281 34.456 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 Gene3D G3DSA:3.30.1300.10 180 281 2.3E-19 T 20-04-2016 APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 Gene3D G3DSA:3.40.50.620 4 176 1.8E-66 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 Pfam PF02569 Pantoate-beta-alanine ligase 6 279 1.3E-93 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 87 1.2E-10 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 SUPERFAMILY SSF52374 4 281 4.56E-91 T 20-04-2016 APS56_RS12055 cadde9a05dc0b5d764b386c210cfaf26 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 8 281 2.3E-82 T 20-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APS56_RS05660 2ed685077e39b19956917930dad23deb 156 Gene3D G3DSA:2.60.40.790 37 155 1.6E-35 T 20-04-2016 IPR008978 HSP20-like chaperone APS56_RS05660 2ed685077e39b19956917930dad23deb 156 Pfam PF00011 Hsp20/alpha crystallin family 54 156 8.3E-25 T 20-04-2016 IPR002068 Alpha crystallin/Hsp20 domain APS56_RS05660 2ed685077e39b19956917930dad23deb 156 SUPERFAMILY SSF49764 23 149 5.02E-35 T 20-04-2016 IPR008978 HSP20-like chaperone APS56_RS05660 2ed685077e39b19956917930dad23deb 156 PANTHER PTHR11527 23 156 6.5E-35 T 20-04-2016 IPR031107 Small heat shock protein HSP20 APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 SUPERFAMILY SSF100950 24 284 1.26E-91 T 20-04-2016 APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 Gene3D G3DSA:3.40.50.1360 25 284 6.0E-95 T 20-04-2016 APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 Gene3D G3DSA:3.40.50.10320 363 403 1.2E-58 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 Gene3D G3DSA:3.40.50.10320 439 635 1.2E-58 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 30 269 1.7E-78 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 37 257 1.0E-18 T 20-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 SUPERFAMILY SSF102588 452 634 4.71E-40 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 SUPERFAMILY SSF102588 364 406 4.71E-40 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 PANTHER PTHR11280 366 637 0.0 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 PANTHER PTHR11280 6 341 0.0 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 Pfam PF02585 GlcNAc-PI de-N-acetylase 368 532 6.0E-20 T 20-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 PANTHER PTHR11280:SF7 366 637 0.0 T 20-04-2016 APS56_RS03100 0d6bfde57cc48c9bf87f7a038e2793cf 637 PANTHER PTHR11280:SF7 6 341 0.0 T 20-04-2016 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 14 701 1.1E-266 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 704 27.747 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Gene3D G3DSA:3.30.1370.10 555 630 8.6E-18 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Gene3D G3DSA:1.10.10.400 230 318 7.4E-24 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Gene3D G3DSA:2.40.50.140 631 702 1.8E-15 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 PANTHER PTHR11252 2 748 0.0 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 SUPERFAMILY SSF55666 146 232 5.89E-25 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Pfam PF00013 KH domain 562 620 1.8E-10 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 323 4.2E-11 T 20-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 PIRSF PIRSF005499 5 734 1.7E-265 T 20-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 SMART SM00316 628 701 8.2E-12 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Gene3D G3DSA:3.30.230.70 14 225 8.0E-74 T 20-04-2016 IPR027408 PNPase/RNase PH domain APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Gene3D G3DSA:3.30.230.70 319 545 4.3E-81 T 20-04-2016 IPR027408 PNPase/RNase PH domain APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Pfam PF00575 S1 RNA binding domain 626 699 2.9E-9 T 20-04-2016 IPR003029 S1 domain GO:0003676 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 SMART SM00322 555 625 6.3E-9 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 SUPERFAMILY SSF54211 14 145 2.18E-39 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Pfam PF03725 3' exoribonuclease family, domain 2 461 532 1.0E-5 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Pfam PF03725 3' exoribonuclease family, domain 2 149 212 9.8E-14 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 SUPERFAMILY SSF54791 544 644 6.33E-16 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Pfam PF01138 3' exoribonuclease family, domain 1 15 145 5.2E-18 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 Pfam PF01138 3' exoribonuclease family, domain 1 326 456 2.4E-20 T 20-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 SUPERFAMILY SSF54211 295 491 1.21E-49 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 SUPERFAMILY SSF50249 618 704 1.34E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14300 57fdef3b68de9f64d0ead378b557b0b7 752 SUPERFAMILY SSF55666 451 551 9.12E-25 T 20-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 Pfam PF13432 Tetratricopeptide repeat 174 223 0.0016 T 20-04-2016 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 Gene3D G3DSA:1.25.40.10 282 381 1.8E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 Gene3D G3DSA:1.25.40.10 24 144 3.5E-20 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 Gene3D G3DSA:1.25.40.10 145 252 5.8E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 PANTHER PTHR23083:SF195 29 394 1.7E-28 T 20-04-2016 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SUPERFAMILY SSF48452 280 378 1.23E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 Pfam PF14559 Tetratricopeptide repeat 66 120 1.1E-7 T 20-04-2016 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SMART SM00028 121 154 27.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SMART SM00028 55 86 250.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SMART SM00028 19 52 87.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SMART SM00028 87 120 110.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SMART SM00028 338 371 470.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SMART SM00028 304 337 150.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SMART SM00028 196 229 97.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SMART SM00028 160 195 310.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 SUPERFAMILY SSF48452 24 255 6.51E-23 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15670 93a5fb29475c0e3e184e6a745eaff6d4 686 PANTHER PTHR23083 29 394 1.7E-28 T 20-04-2016 APS56_RS11210 0a76b37772f9cfb7bd766b5fe10cd489 181 Gene3D G3DSA:3.40.30.10 6 176 1.5E-17 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS11210 0a76b37772f9cfb7bd766b5fe10cd489 181 Pfam PF00578 AhpC/TSA family 60 156 3.7E-7 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS11210 0a76b37772f9cfb7bd766b5fe10cd489 181 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APS56_RS11210 0a76b37772f9cfb7bd766b5fe10cd489 181 SUPERFAMILY SSF52833 57 161 5.44E-16 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS13635 03a5e93917bcc19c5b28daa2648a477e 123 SUPERFAMILY SSF54593 7 122 5.06E-16 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS13635 03a5e93917bcc19c5b28daa2648a477e 123 Gene3D G3DSA:3.10.180.10 5 122 6.4E-19 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 PANTHER PTHR30195 12 420 1.2E-192 T 20-04-2016 APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 PANTHER PTHR30195 456 915 1.2E-192 T 20-04-2016 APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 SUPERFAMILY SSF52540 267 419 2.58E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 SUPERFAMILY SSF52540 452 524 2.58E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 SMART SM00487 273 500 5.0E-7 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 119 208 5.1E-12 T 20-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 Pfam PF04851 Type III restriction enzyme, res subunit 278 432 8.9E-12 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 PANTHER PTHR30195:SF13 12 420 1.2E-192 T 20-04-2016 APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 PANTHER PTHR30195:SF13 456 915 1.2E-192 T 20-04-2016 APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 Gene3D G3DSA:3.40.50.300 270 430 1.0E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02780 5df3196bdc3d91b8ca3b628d4102fd42 1003 Gene3D G3DSA:3.40.50.300 466 480 1.0E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11150 00c6db92b69df0bd62418e12ac0476ea 330 Pfam PF13528 Glycosyl transferase family 1 1 299 5.9E-37 T 20-04-2016 APS56_RS11150 00c6db92b69df0bd62418e12ac0476ea 330 SUPERFAMILY SSF53756 1 266 4.71E-7 T 20-04-2016 APS56_RS11150 00c6db92b69df0bd62418e12ac0476ea 330 Gene3D G3DSA:3.40.50.2000 223 288 3.1E-5 T 20-04-2016 APS56_RS15315 7f3d263f776ec849f25b84618be03ab6 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 143 6.0E-13 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15315 7f3d263f776ec849f25b84618be03ab6 611 SUPERFAMILY SSF56935 38 611 1.94E-69 T 20-04-2016 APS56_RS15315 7f3d263f776ec849f25b84618be03ab6 611 Pfam PF00593 TonB dependent receptor 381 610 2.7E-24 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15315 7f3d263f776ec849f25b84618be03ab6 611 Gene3D G3DSA:2.40.170.20 160 611 1.8E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15315 7f3d263f776ec849f25b84618be03ab6 611 Gene3D G3DSA:2.170.130.10 44 148 3.9E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15315 7f3d263f776ec849f25b84618be03ab6 611 PANTHER PTHR32552 20 611 1.0E-17 T 20-04-2016 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 PANTHER PTHR10993 5 231 2.5E-76 T 20-04-2016 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 Hamap MF_00013 Octanoyltransferase [lipB]. 4 230 33.482 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 SUPERFAMILY SSF55681 3 229 4.39E-60 T 20-04-2016 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 45 227 1.2E-50 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 92 145 2.0E-14 T 20-04-2016 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 PIRSF PIRSF016262 1 231 7.6E-58 T 20-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 Pfam PF03099 Biotin/lipoate A/B protein ligase family 71 181 7.8E-9 T 20-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 Gene3D G3DSA:3.90.1550.10 2 227 1.0E-68 T 20-04-2016 APS56_RS13645 b601d73deaa9bf34fec930df224922dd 232 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 88 103 - T 20-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 247 1.1E-67 T 20-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 252 29.115 T 20-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 Gene3D G3DSA:3.40.1160.10 3 247 8.4E-42 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 PIRSF PIRSF000729 1 253 2.2E-72 T 20-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 PRINTS PR00474 Glutamate 5-kinase family signature 40 54 3.4E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 PRINTS PR00474 Glutamate 5-kinase family signature 74 102 3.4E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 PRINTS PR00474 Glutamate 5-kinase family signature 114 135 3.4E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 PRINTS PR00474 Glutamate 5-kinase family signature 206 226 3.4E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 PRINTS PR00474 Glutamate 5-kinase family signature 146 173 3.4E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 PANTHER PTHR11063 1 252 7.7E-47 T 20-04-2016 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 PANTHER PTHR11063:SF6 1 252 7.7E-47 T 20-04-2016 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 ProSitePatterns PS00902 Glutamate 5-kinase signature. 204 221 - T 20-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 Pfam PF00696 Amino acid kinase family 4 232 3.1E-36 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS07485 e4d795b6394701890c4d1207d4641ed4 253 SUPERFAMILY SSF53633 4 252 4.97E-52 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS05110 5fa999731bb6277f8a6c4c85571f2e38 562 SUPERFAMILY SSF55021 386 447 2.89E-7 T 20-04-2016 APS56_RS05110 5fa999731bb6277f8a6c4c85571f2e38 562 PANTHER PTHR21039 8 332 1.2E-34 T 20-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 APS56_RS05110 5fa999731bb6277f8a6c4c85571f2e38 562 SUPERFAMILY SSF55021 480 549 5.31E-8 T 20-04-2016 APS56_RS05110 5fa999731bb6277f8a6c4c85571f2e38 562 Gene3D G3DSA:3.20.20.140 24 288 9.0E-18 T 20-04-2016 APS56_RS05110 5fa999731bb6277f8a6c4c85571f2e38 562 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 21 276 4.0E-33 T 20-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 APS56_RS05110 5fa999731bb6277f8a6c4c85571f2e38 562 SUPERFAMILY SSF89550 25 304 2.62E-22 T 20-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APS56_RS05110 5fa999731bb6277f8a6c4c85571f2e38 562 Gene3D G3DSA:3.30.70.260 477 547 3.9E-8 T 20-04-2016 APS56_RS05110 5fa999731bb6277f8a6c4c85571f2e38 562 Gene3D G3DSA:3.30.70.260 386 448 2.7E-7 T 20-04-2016 APS56_RS01730 821e6f899273d2c06a49bdce634edc20 1388 Pfam PF02494 HYR domain 966 1042 3.8E-8 T 20-04-2016 IPR003410 HYR domain APS56_RS01730 821e6f899273d2c06a49bdce634edc20 1388 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1296 1374 1.1E-10 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS01730 821e6f899273d2c06a49bdce634edc20 1388 Pfam PF13573 SprB repeat 888 924 3.8E-10 T 20-04-2016 IPR025667 SprB repeat APS56_RS01730 821e6f899273d2c06a49bdce634edc20 1388 Pfam PF13585 C-terminal domain of CHU protein family 1295 1377 3.4E-22 T 20-04-2016 APS56_RS04210 38f2a784e981e02c762b98dd3c4f93a1 186 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 2.0E-45 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 APS56_RS04210 38f2a784e981e02c762b98dd3c4f93a1 186 PANTHER PTHR17490 4 185 6.4E-52 T 20-04-2016 APS56_RS04210 38f2a784e981e02c762b98dd3c4f93a1 186 Gene3D G3DSA:3.90.870.10 4 185 7.1E-54 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APS56_RS04210 38f2a784e981e02c762b98dd3c4f93a1 186 Pfam PF01300 Telomere recombination 10 185 4.8E-43 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 APS56_RS04210 38f2a784e981e02c762b98dd3c4f93a1 186 SUPERFAMILY SSF55821 5 185 1.04E-42 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 Gene3D G3DSA:3.30.860.10 1 91 3.1E-39 T 20-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 SUPERFAMILY SSF54570 3 84 1.7E-33 T 20-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.2E-23 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.2E-23 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.2E-23 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 20-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 8.4E-43 T 20-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 PIRSF PIRSF002144 1 92 1.3E-32 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 PANTHER PTHR11880 1 89 5.4E-47 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.881 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APS56_RS13965 7ec2a34c65ee8bdf3ba88e61002d59a1 92 Pfam PF00203 Ribosomal protein S19 3 83 1.9E-35 T 20-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 Gene3D G3DSA:1.20.210.10 13 582 1.8E-177 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 SUPERFAMILY SSF81442 22 558 8.11E-150 T 20-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PANTHER PTHR10422 11 550 2.9E-157 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 466 487 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 25 50 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 193 211 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 139 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 388 406 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 158 170 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 353 374 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 416 435 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 87 110 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PRINTS PR01165 Cytochrome c oxidase subunit I signature 329 344 2.3E-73 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 35 512 7.7E-136 T 20-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 PANTHER PTHR10422:SF27 11 550 2.9E-157 T 20-04-2016 APS56_RS12935 e17a5edc78213dd435c848abd51a67dc 597 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 285 339 - T 20-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APS56_RS13735 3bf0fda9712ce60e56e804738fc8fc3a 582 Pfam PF14322 Starch-binding associating with outer membrane 45 238 9.9E-20 T 20-04-2016 APS56_RS13735 3bf0fda9712ce60e56e804738fc8fc3a 582 SUPERFAMILY SSF48452 17 582 5.06E-109 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13735 3bf0fda9712ce60e56e804738fc8fc3a 582 Pfam PF07980 SusD family 306 582 9.1E-50 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS13735 3bf0fda9712ce60e56e804738fc8fc3a 582 Gene3D G3DSA:1.25.40.10 218 342 1.6E-31 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13735 3bf0fda9712ce60e56e804738fc8fc3a 582 Gene3D G3DSA:1.25.40.10 409 502 1.6E-31 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 Hamap MF_01151 Protein GrpE [grpE]. 4 188 18.047 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 PRINTS PR00773 GrpE protein signature 56 72 7.0E-23 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 PRINTS PR00773 GrpE protein signature 84 99 7.0E-23 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 PRINTS PR00773 GrpE protein signature 139 154 7.0E-23 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 PRINTS PR00773 GrpE protein signature 167 186 7.0E-23 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 Gene3D G3DSA:3.90.20.20 29 128 3.1E-27 T 20-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 SUPERFAMILY SSF51064 137 187 7.85E-9 T 20-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 PANTHER PTHR21237 11 180 2.2E-30 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 SUPERFAMILY SSF58014 38 130 1.18E-24 T 20-04-2016 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 Gene3D G3DSA:2.30.22.10 131 186 1.8E-13 T 20-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APS56_RS04330 f5cf6da251ec111d0d12882b4c54529a 188 Pfam PF01025 GrpE 25 187 5.2E-41 T 20-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PIRSF PIRSF000166 1 300 4.7E-130 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 SUPERFAMILY SSF102886 2 300 5.89E-128 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PANTHER PTHR10755:SF0 1 300 5.7E-174 T 20-04-2016 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PRINTS PR00073 Coprogen oxidase signature 120 142 4.9E-84 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PRINTS PR00073 Coprogen oxidase signature 84 108 4.9E-84 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PRINTS PR00073 Coprogen oxidase signature 157 186 4.9E-84 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PRINTS PR00073 Coprogen oxidase signature 27 43 4.9E-84 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PRINTS PR00073 Coprogen oxidase signature 232 259 4.9E-84 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PRINTS PR00073 Coprogen oxidase signature 44 65 4.9E-84 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PRINTS PR00073 Coprogen oxidase signature 260 286 4.9E-84 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 Pfam PF01218 Coproporphyrinogen III oxidase 7 300 8.0E-136 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 Gene3D G3DSA:3.40.1500.10 3 300 1.1E-132 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10485 27ef7c512ee77ded3ba673dfe65401b7 300 PANTHER PTHR10755 1 300 5.7E-174 T 20-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 PANTHER PTHR30191 4 741 0.0 T 20-04-2016 APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 ProSitePatterns PS00850 Glycine radical domain signature. 711 719 - T 20-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 Pfam PF02901 Pyruvate formate lyase-like 21 600 9.0E-180 T 20-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 5 741 0.0 T 20-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 PIRSF PIRSF000379 1 741 0.0 T 20-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 PANTHER PTHR30191:SF0 4 741 0.0 T 20-04-2016 APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 SUPERFAMILY SSF51998 4 740 3.66E-255 T 20-04-2016 APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 Pfam PF01228 Glycine radical 616 722 2.4E-41 T 20-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APS56_RS07775 3c0a51885bee8e46a895670b7a5dd131 741 Gene3D G3DSA:3.20.70.20 3 740 1.1E-274 T 20-04-2016 APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 SUPERFAMILY SSF82771 197 274 1.7E-16 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 SMART SM00465 196 275 1.8E-11 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 Pfam PF01541 GIY-YIG catalytic domain 198 269 2.7E-10 T 20-04-2016 IPR000305 GIY-YIG nuclease superfamily APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 Pfam PF00929 Exonuclease 4 157 2.8E-29 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 171 3.4E-25 T 20-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 Gene3D G3DSA:3.40.1440.10 197 242 6.1E-8 T 20-04-2016 IPR027299 GIY-YIG domain APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 SMART SM00479 1 166 2.6E-35 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 SUPERFAMILY SSF53098 300 347 8.73E-52 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 SUPERFAMILY SSF53098 2 186 8.73E-52 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 PANTHER PTHR30231 2 163 3.8E-40 T 20-04-2016 APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 Gene3D G3DSA:3.30.420.10 2 166 6.8E-49 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS00780 2ddc75c90df31d40b1bbb8ac309b9120 456 PANTHER PTHR30231:SF8 2 163 3.8E-40 T 20-04-2016 APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 PANTHER PTHR11911 172 289 5.0E-21 T 20-04-2016 APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 SUPERFAMILY SSF54631 172 286 6.72E-26 T 20-04-2016 APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 Pfam PF00027 Cyclic nucleotide-binding domain 38 123 6.4E-15 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 SMART SM00116 174 222 4.1E-8 T 20-04-2016 IPR000644 CBS domain APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 SMART SM00116 239 290 4.9E-5 T 20-04-2016 IPR000644 CBS domain APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 Gene3D G3DSA:2.60.120.10 12 140 7.1E-23 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 Pfam PF00571 CBS domain 172 221 6.5E-7 T 20-04-2016 IPR000644 CBS domain APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 Pfam PF00571 CBS domain 232 287 2.5E-7 T 20-04-2016 IPR000644 CBS domain APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 SUPERFAMILY SSF51206 12 137 3.93E-22 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 Gene3D G3DSA:3.10.580.10 173 286 1.0E-27 T 20-04-2016 APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 492 632 4.3E-32 T 20-04-2016 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding APS56_RS01525 331920ef4c872933e34fa64b18a3cb89 638 Pfam PF03445 Putative nucleotidyltransferase DUF294 317 454 6.6E-45 T 20-04-2016 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 APS56_RS03110 83315b420d1588892c56f98e8a0dba6d 574 Pfam PF07980 SusD family 305 572 2.1E-41 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS03110 83315b420d1588892c56f98e8a0dba6d 574 Pfam PF14322 Starch-binding associating with outer membrane 28 220 3.2E-19 T 20-04-2016 APS56_RS03110 83315b420d1588892c56f98e8a0dba6d 574 Gene3D G3DSA:1.25.40.10 205 315 7.6E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03110 83315b420d1588892c56f98e8a0dba6d 574 Gene3D G3DSA:1.25.40.10 382 486 7.6E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03110 83315b420d1588892c56f98e8a0dba6d 574 SUPERFAMILY SSF48452 540 572 6.45E-106 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03110 83315b420d1588892c56f98e8a0dba6d 574 SUPERFAMILY SSF48452 17 513 6.45E-106 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15885 c826267ae23dd9e724f523434733ec05 233 SUPERFAMILY SSF56784 25 209 1.38E-23 T 20-04-2016 IPR023214 HAD-like domain APS56_RS15885 c826267ae23dd9e724f523434733ec05 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 198 6.8E-22 T 20-04-2016 IPR023214 HAD-like domain APS56_RS15885 c826267ae23dd9e724f523434733ec05 233 Gene3D G3DSA:3.40.50.1000 99 230 4.3E-20 T 20-04-2016 IPR023214 HAD-like domain APS56_RS15885 c826267ae23dd9e724f523434733ec05 233 Gene3D G3DSA:3.40.50.1000 23 36 4.3E-20 T 20-04-2016 IPR023214 HAD-like domain APS56_RS15885 c826267ae23dd9e724f523434733ec05 233 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 115 193 3.9E-7 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS15885 c826267ae23dd9e724f523434733ec05 233 PANTHER PTHR12725:SF78 6 219 1.4E-22 T 20-04-2016 APS56_RS15885 c826267ae23dd9e724f523434733ec05 233 PANTHER PTHR12725 6 219 1.4E-22 T 20-04-2016 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 Gene3D G3DSA:2.130.10.120 92 429 3.8E-100 T 20-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 SUPERFAMILY SSF53474 437 680 8.39E-49 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 28 424 7.8E-122 T 20-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 PANTHER PTHR11757 23 704 5.8E-305 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 PANTHER PTHR11757:SF2 23 704 5.8E-305 T 20-04-2016 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 SUPERFAMILY SSF50993 23 432 8.37E-96 T 20-04-2016 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 468 486 1.5E-59 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 494 518 1.5E-59 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 552 572 1.5E-59 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 608 623 1.5E-59 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 522 541 1.5E-59 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 627 649 1.5E-59 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 Pfam PF00326 Prolyl oligopeptidase family 483 698 4.3E-67 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 529 559 - T 20-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 APS56_RS11230 ea72ef183651c9a1c690607383ef19ba 706 Gene3D G3DSA:3.40.50.1820 435 692 8.5E-47 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS15890 f47c201cb08348c6a0dc9c0aa9422620 327 SUPERFAMILY SSF51735 6 178 4.4E-48 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15890 f47c201cb08348c6a0dc9c0aa9422620 327 Gene3D G3DSA:3.30.360.10 151 327 4.4E-42 T 20-04-2016 APS56_RS15890 f47c201cb08348c6a0dc9c0aa9422620 327 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 125 1.7E-24 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS15890 f47c201cb08348c6a0dc9c0aa9422620 327 PANTHER PTHR22604:SF105 1 327 2.0E-92 T 20-04-2016 APS56_RS15890 f47c201cb08348c6a0dc9c0aa9422620 327 SUPERFAMILY SSF55347 133 294 8.18E-32 T 20-04-2016 APS56_RS15890 f47c201cb08348c6a0dc9c0aa9422620 327 Gene3D G3DSA:3.40.50.720 4 150 4.7E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15890 f47c201cb08348c6a0dc9c0aa9422620 327 PANTHER PTHR22604 1 327 2.0E-92 T 20-04-2016 APS56_RS07315 b3a9b583b3da075293d6602d5494f5b4 283 Pfam PF02153 Prephenate dehydrogenase 17 270 3.7E-63 T 20-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 APS56_RS07315 b3a9b583b3da075293d6602d5494f5b4 283 SUPERFAMILY SSF51735 4 167 2.04E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07315 b3a9b583b3da075293d6602d5494f5b4 283 Gene3D G3DSA:1.10.3660.10 178 272 6.2E-4 T 20-04-2016 APS56_RS07315 b3a9b583b3da075293d6602d5494f5b4 283 SUPERFAMILY SSF48179 170 275 1.36E-29 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS07315 b3a9b583b3da075293d6602d5494f5b4 283 Gene3D G3DSA:3.40.50.720 2 176 1.9E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07315 b3a9b583b3da075293d6602d5494f5b4 283 PANTHER PTHR21363 1 279 4.8E-53 T 20-04-2016 APS56_RS07315 b3a9b583b3da075293d6602d5494f5b4 283 PANTHER PTHR21363:SF0 1 279 4.8E-53 T 20-04-2016 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Gene3D G3DSA:3.40.50.300 194 372 8.2E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Gene3D G3DSA:3.40.50.300 537 694 7.5E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Gene3D G3DSA:3.40.50.300 730 756 7.5E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 602 620 - T 20-04-2016 IPR028299 ClpA/B, conserved site 2 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 64 2.9E-13 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 99 144 1.5E-4 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 SUPERFAMILY SSF81923 3 142 2.49E-23 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 747 827 4.0E-25 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Gene3D G3DSA:1.10.8.60 375 459 2.2E-31 T 20-04-2016 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 PANTHER PTHR11638:SF18 1 144 0.0 T 20-04-2016 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 PANTHER PTHR11638:SF18 175 848 0.0 T 20-04-2016 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 SUPERFAMILY SSF52540 192 506 1.26E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 PANTHER PTHR11638 1 144 0.0 T 20-04-2016 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 PANTHER PTHR11638 175 848 0.0 T 20-04-2016 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Gene3D G3DSA:1.10.8.60 757 845 2.2E-31 T 20-04-2016 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 326 338 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Pfam PF02151 UvrB/uvrC motif 448 483 4.5E-5 T 20-04-2016 IPR001943 UVR domain GO:0005515 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 572 590 2.4E-40 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 693 2.4E-40 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 617 635 2.4E-40 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 2.4E-40 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Pfam PF07724 AAA domain (Cdc48 subfamily) 567 740 3.6E-51 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 SUPERFAMILY SSF52540 517 831 5.57E-74 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 SMART SM00382 568 707 2.5E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 SMART SM00382 231 375 2.9E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Gene3D G3DSA:1.10.1780.10 5 146 3.2E-32 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 348 1.9E-12 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APS56_RS03270 07ae059c64ea483259a320fdcfa4e65e 849 SMART SM01086 747 838 4.2E-31 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APS56_RS10355 56a20c311c5ee733eb64ed8d9fc71885 216 Pfam PF01966 HD domain 29 128 4.1E-8 T 20-04-2016 IPR006674 HD domain APS56_RS10355 56a20c311c5ee733eb64ed8d9fc71885 216 Gene3D G3DSA:1.10.3210.10 185 215 3.7E-50 T 20-04-2016 IPR006674 HD domain APS56_RS10355 56a20c311c5ee733eb64ed8d9fc71885 216 Gene3D G3DSA:1.10.3210.10 2 142 3.7E-50 T 20-04-2016 IPR006674 HD domain APS56_RS10355 56a20c311c5ee733eb64ed8d9fc71885 216 SMART SM00471 22 138 3.7E-7 T 20-04-2016 IPR003607 HD/PDEase domain APS56_RS10355 56a20c311c5ee733eb64ed8d9fc71885 216 PANTHER PTHR33594 1 215 7.8E-78 T 20-04-2016 APS56_RS10355 56a20c311c5ee733eb64ed8d9fc71885 216 SUPERFAMILY SSF109604 1 215 1.76E-74 T 20-04-2016 APS56_RS10355 56a20c311c5ee733eb64ed8d9fc71885 216 PANTHER PTHR33594:SF1 1 215 7.8E-78 T 20-04-2016 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Gene3D G3DSA:3.30.420.140 314 436 9.1E-49 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 SUPERFAMILY SSF50249 621 704 1.27E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 SUPERFAMILY SSF47781 546 617 2.45E-18 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Pfam PF12836 Helix-hairpin-helix motif 477 541 1.4E-25 T 20-04-2016 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 SUPERFAMILY SSF158832 2 307 1.83E-95 T 20-04-2016 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 SMART SM00316 635 706 4.3E-19 T 20-04-2016 IPR022967 RNA-binding domain, S1 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 PANTHER PTHR10724:SF1 2 703 1.2E-281 T 20-04-2016 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Gene3D G3DSA:1.10.150.310 485 616 4.9E-45 T 20-04-2016 IPR023097 Tex RuvX-like domain APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 SUPERFAMILY SSF47781 456 543 8.23E-26 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Gene3D G3DSA:1.10.3500.10 437 484 9.1E-86 T 20-04-2016 IPR023323 Tex-like domain APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Gene3D G3DSA:1.10.3500.10 108 310 9.1E-86 T 20-04-2016 IPR023323 Tex-like domain APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 PANTHER PTHR10724 2 703 1.2E-281 T 20-04-2016 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Pfam PF16921 Tex protein YqgF-like domain 314 437 4.0E-48 T 20-04-2016 IPR032639 Tex protein, YqgF-like domain APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Pfam PF09371 Tex-like protein N-terminal domain 10 189 4.9E-57 T 20-04-2016 IPR018974 Tex-like protein, N-terminal APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 SMART SM00732 314 410 8.9E-27 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Gene3D G3DSA:2.40.50.140 625 705 1.6E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Gene3D G3DSA:1.10.10.650 2 106 4.5E-33 T 20-04-2016 IPR023319 Tex-like protein, HTH domain APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 Pfam PF00575 S1 RNA binding domain 634 704 4.6E-15 T 20-04-2016 IPR003029 S1 domain GO:0003676 APS56_RS10270 1d6eb8b8acf20dcb2cb2201c5113f66b 707 SUPERFAMILY SSF53098 310 455 3.94E-46 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 179 33.779 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 Gene3D G3DSA:3.90.930.12 2 81 4.2E-29 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 Pfam PF00347 Ribosomal protein L6 89 166 2.0E-14 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 Pfam PF00347 Ribosomal protein L6 11 81 7.0E-18 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 157 165 - T 20-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 PIRSF PIRSF002162 1 180 3.2E-46 T 20-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 PANTHER PTHR11655 1 180 5.4E-78 T 20-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 Gene3D G3DSA:3.90.930.12 83 179 1.0E-32 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 SUPERFAMILY SSF56053 82 179 3.08E-29 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 SUPERFAMILY SSF56053 1 81 1.7E-25 T 20-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 PANTHER PTHR11655:SF14 1 180 5.4E-78 T 20-04-2016 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 179 1.3E-66 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 PRINTS PR00059 Ribosomal protein L6 signature 144 165 2.3E-24 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS14020 023ccb88b25e58430daf6dd144e93938 180 PRINTS PR00059 Ribosomal protein L6 signature 70 95 2.3E-24 T 20-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS07840 d3216787b4ec89e5178987231541cf65 375 SUPERFAMILY SSF53300 184 351 1.75E-15 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS07840 d3216787b4ec89e5178987231541cf65 375 Gene3D G3DSA:3.40.50.410 181 326 1.5E-4 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 2 101 25.928 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 Gene3D G3DSA:3.30.70.600 3 101 1.4E-43 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 SMART SM01403 6 100 5.5E-54 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 28 43 - T 20-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 PRINTS PR00971 Ribosomal protein S10 family signature 39 54 1.2E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 PRINTS PR00971 Ribosomal protein S10 family signature 60 74 1.2E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 PRINTS PR00971 Ribosomal protein S10 family signature 4 17 1.2E-17 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 SUPERFAMILY SSF54999 4 101 3.66E-37 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 Pfam PF00338 Ribosomal protein S10p/S20e 6 100 1.6E-36 T 20-04-2016 IPR027486 Ribosomal protein S10 domain APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 PANTHER PTHR11700 1 101 3.5E-47 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APS56_RS13940 bff494e2ace50b586705ead42718b1e4 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 3 101 1.4E-44 T 20-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 PANTHER PTHR24031:SF210 47 176 9.0E-36 T 20-04-2016 APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 PANTHER PTHR24031:SF210 217 341 9.0E-36 T 20-04-2016 APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 Gene3D G3DSA:3.40.50.300 8 168 4.3E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 Gene3D G3DSA:3.40.50.300 233 354 4.6E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 SMART SM00490 262 343 1.9E-5 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 Pfam PF00271 Helicase conserved C-terminal domain 236 342 2.6E-13 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 Pfam PF04851 Type III restriction enzyme, res subunit 17 166 2.8E-22 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 PANTHER PTHR24031 47 176 9.0E-36 T 20-04-2016 APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 PANTHER PTHR24031 217 341 9.0E-36 T 20-04-2016 APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 SMART SM00487 14 191 1.6E-18 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 SUPERFAMILY SSF52540 217 346 1.06E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03525 bf1e32b719f42ffad0a964cf016eef9a 518 SUPERFAMILY SSF52540 39 169 1.06E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16635 60843d19066730ef41ffb0470bba7711 135 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 135 2.6E-43 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APS56_RS16635 60843d19066730ef41ffb0470bba7711 135 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 41 7.9E-19 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APS56_RS16635 60843d19066730ef41ffb0470bba7711 135 PANTHER PTHR10938 1 135 1.5E-43 T 20-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APS56_RS16635 60843d19066730ef41ffb0470bba7711 135 SUPERFAMILY SSF55200 51 135 1.23E-26 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APS56_RS16635 60843d19066730ef41ffb0470bba7711 135 Gene3D G3DSA:3.30.110.10 46 135 2.1E-31 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APS56_RS16635 60843d19066730ef41ffb0470bba7711 135 SUPERFAMILY SSF54364 2 43 1.7E-15 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APS56_RS16635 60843d19066730ef41ffb0470bba7711 135 Gene3D G3DSA:3.10.20.80 1 43 1.6E-19 T 20-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APS56_RS16635 60843d19066730ef41ffb0470bba7711 135 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 51 133 4.3E-31 T 20-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APS56_RS07325 5c3555fe68a0e3d579080c404aeff63e 275 Pfam PF00800 Prephenate dehydratase 5 182 1.0E-51 T 20-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APS56_RS07325 5c3555fe68a0e3d579080c404aeff63e 275 SUPERFAMILY SSF55021 192 270 9.16E-18 T 20-04-2016 APS56_RS07325 5c3555fe68a0e3d579080c404aeff63e 275 Gene3D G3DSA:3.40.190.10 90 168 1.2E-24 T 20-04-2016 APS56_RS07325 5c3555fe68a0e3d579080c404aeff63e 275 Gene3D G3DSA:3.30.70.260 192 268 3.3E-18 T 20-04-2016 APS56_RS07325 5c3555fe68a0e3d579080c404aeff63e 275 Gene3D G3DSA:3.40.190.10 4 89 7.5E-22 T 20-04-2016 APS56_RS07325 5c3555fe68a0e3d579080c404aeff63e 275 PANTHER PTHR21022 4 270 9.6E-69 T 20-04-2016 APS56_RS07325 5c3555fe68a0e3d579080c404aeff63e 275 SUPERFAMILY SSF53850 4 187 5.97E-51 T 20-04-2016 APS56_RS07325 5c3555fe68a0e3d579080c404aeff63e 275 PANTHER PTHR21022:SF0 4 270 9.6E-69 T 20-04-2016 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 Pfam PF07499 RuvA, C-terminal domain 150 193 2.7E-12 T 20-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 Pfam PF14520 Helix-hairpin-helix domain 71 129 3.2E-15 T 20-04-2016 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 Pfam PF01330 RuvA N terminal domain 1 61 8.4E-23 T 20-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 PANTHER PTHR33796 2 193 5.1E-60 T 20-04-2016 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 SMART SM00278 72 91 89.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 SMART SM00278 107 126 16.0 T 20-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 SUPERFAMILY SSF46929 146 193 3.4E-13 T 20-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 Gene3D G3DSA:1.10.8.10 143 193 2.5E-18 T 20-04-2016 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 Gene3D G3DSA:2.40.50.140 1 63 1.0E-24 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 192 1.3E-46 T 20-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 SUPERFAMILY SSF47781 65 133 3.34E-18 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 193 27.058 T 20-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 Gene3D G3DSA:1.10.150.20 66 142 2.4E-26 T 20-04-2016 APS56_RS12980 4e4fc18a807dea96ca7b8befb6b6fad8 193 SUPERFAMILY SSF50249 1 62 9.14E-16 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS03075 33ab250944fdaed73b12f0a1cf81e2bb 322 PIRSF PIRSF016202 1 322 1.4E-108 T 20-04-2016 IPR007184 Mannoside phosphorylase APS56_RS03075 33ab250944fdaed73b12f0a1cf81e2bb 322 PANTHER PTHR34106 5 322 2.7E-162 T 20-04-2016 APS56_RS03075 33ab250944fdaed73b12f0a1cf81e2bb 322 PANTHER PTHR34106:SF1 5 322 2.7E-162 T 20-04-2016 APS56_RS03075 33ab250944fdaed73b12f0a1cf81e2bb 322 SUPERFAMILY SSF75005 16 316 2.09E-82 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS03075 33ab250944fdaed73b12f0a1cf81e2bb 322 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 3 318 1.4E-67 T 20-04-2016 IPR007184 Mannoside phosphorylase APS56_RS03075 33ab250944fdaed73b12f0a1cf81e2bb 322 Gene3D G3DSA:2.115.10.20 5 320 1.2E-106 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 Gene3D G3DSA:1.10.760.10 46 195 6.0E-44 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 Pfam PF00034 Cytochrome c 213 325 3.4E-10 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 SUPERFAMILY SSF46626 37 192 2.41E-45 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 PIRSF PIRSF000294 3 335 6.1E-105 T 20-04-2016 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 Pfam PF03150 Di-haem cytochrome c peroxidase 54 202 1.1E-46 T 20-04-2016 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 PANTHER PTHR30600 30 335 1.2E-100 T 20-04-2016 APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 SUPERFAMILY SSF46626 191 330 1.12E-37 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 Gene3D G3DSA:1.10.760.10 196 328 6.5E-39 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01770 57e915f017f5aa4c3de208aefe6da10f 337 PANTHER PTHR30600:SF7 30 335 1.2E-100 T 20-04-2016 APS56_RS15605 0b9e2e47d6ca310825bdceb22557bc97 428 PANTHER PTHR30619 206 244 8.7E-19 T 20-04-2016 APS56_RS15605 0b9e2e47d6ca310825bdceb22557bc97 428 PANTHER PTHR30619 265 427 8.7E-19 T 20-04-2016 APS56_RS15605 0b9e2e47d6ca310825bdceb22557bc97 428 PANTHER PTHR30619 49 169 8.7E-19 T 20-04-2016 APS56_RS15605 0b9e2e47d6ca310825bdceb22557bc97 428 SUPERFAMILY SSF56281 51 357 1.44E-15 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS15605 0b9e2e47d6ca310825bdceb22557bc97 428 Gene3D G3DSA:3.60.15.10 320 354 1.5E-10 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS15605 0b9e2e47d6ca310825bdceb22557bc97 428 Gene3D G3DSA:3.60.15.10 227 288 1.5E-10 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS15605 0b9e2e47d6ca310825bdceb22557bc97 428 Gene3D G3DSA:3.60.15.10 46 174 1.5E-10 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 Gene3D G3DSA:3.50.30.20 8 152 6.1E-51 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 SMART SM01097 7 138 9.1E-72 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00096 Glutamine amidotransferase superfamily signature 225 234 6.9E-12 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00096 Glutamine amidotransferase superfamily signature 340 353 6.9E-12 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00096 Glutamine amidotransferase superfamily signature 253 264 6.9E-12 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PANTHER PTHR11405 7 370 3.6E-176 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 SUPERFAMILY SSF52021 8 155 5.75E-48 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 Pfam PF00117 Glutamine amidotransferase class-I 186 363 5.9E-44 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 Gene3D G3DSA:3.40.50.880 157 368 3.7E-67 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 SUPERFAMILY SSF52317 156 368 4.74E-57 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 270 287 2.3E-35 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 222 236 2.3E-35 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 183 197 2.3E-35 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 253 269 2.3E-35 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 295 306 2.3E-35 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00097 Anthranilate synthase component II signature 253 264 1.4E-6 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00097 Anthranilate synthase component II signature 225 234 1.4E-6 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 PRINTS PR00097 Anthranilate synthase component II signature 340 353 1.4E-6 T 20-04-2016 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 9 367 1.9E-138 T 20-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 7 369 44.618 T 20-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS14080 56adb2d6761f1b7ffa6339884210c8d5 370 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 8 137 5.7E-47 T 20-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Pfam PF01556 DnaJ C terminal domain 127 334 4.9E-38 T 20-04-2016 IPR002939 Chaperone DnaJ, C-terminal APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Gene3D G3DSA:1.10.287.110 1 98 2.2E-37 T 20-04-2016 IPR001623 DnaJ domain APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 PRINTS PR00625 DnaJ domain signature 62 81 1.3E-30 T 20-04-2016 IPR001623 DnaJ domain APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 PRINTS PR00625 DnaJ domain signature 42 62 1.3E-30 T 20-04-2016 IPR001623 DnaJ domain APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-30 T 20-04-2016 IPR001623 DnaJ domain APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-30 T 20-04-2016 IPR001623 DnaJ domain APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Gene3D G3DSA:2.60.260.20 210 255 2.8E-18 T 20-04-2016 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Gene3D G3DSA:2.60.260.20 114 153 2.8E-18 T 20-04-2016 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 SUPERFAMILY SSF57938 157 199 1.11E-9 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 SUPERFAMILY SSF49493 261 345 3.66E-23 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 SUPERFAMILY SSF46565 1 111 3.14E-36 T 20-04-2016 IPR001623 DnaJ domain APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Gene3D G3DSA:2.10.230.10 157 200 1.8E-12 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 20-04-2016 IPR018253 DnaJ domain, conserved site APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Pfam PF00684 DnaJ central domain 156 200 3.2E-8 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 PANTHER PTHR24078:SF190 1 372 2.2E-129 T 20-04-2016 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 SMART SM00271 4 62 1.6E-30 T 20-04-2016 IPR001623 DnaJ domain APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Pfam PF00226 DnaJ domain 5 67 6.4E-26 T 20-04-2016 IPR001623 DnaJ domain APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Gene3D G3DSA:2.60.260.20 257 335 1.2E-21 T 20-04-2016 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 PANTHER PTHR24078 1 372 2.2E-129 T 20-04-2016 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 32.861 T 20-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 SUPERFAMILY SSF49493 214 267 1.05E-17 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APS56_RS04325 76d43afd0b20423f7a87c390e851148e 374 SUPERFAMILY SSF49493 119 166 1.05E-17 T 20-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 PANTHER PTHR30195 273 988 4.2E-137 T 20-04-2016 APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 PANTHER PTHR30195 9 229 4.2E-137 T 20-04-2016 APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 17 748 8.9E-139 T 20-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 SUPERFAMILY SSF52540 288 547 1.86E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 PANTHER PTHR30195:SF15 273 988 4.2E-137 T 20-04-2016 APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 PANTHER PTHR30195:SF15 9 229 4.2E-137 T 20-04-2016 APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 SMART SM00487 317 521 1.1E-10 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 217 2.0E-30 T 20-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 Gene3D G3DSA:3.40.50.300 319 490 1.5E-19 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08685 aa489315da3081df71bc13969a4fe883 1087 Pfam PF04851 Type III restriction enzyme, res subunit 321 484 8.2E-19 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APS56_RS06260 3d3d6952142a21cc0c64466e6476e750 207 SUPERFAMILY SSF49899 25 189 8.39E-7 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 1.0E-57 T 20-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 Gene3D G3DSA:3.30.1330.30 1 76 3.1E-16 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 77 4.3E-15 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 Pfam PF00588 SpoU rRNA Methylase family 97 237 3.6E-34 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 Gene3D G3DSA:3.40.1280.10 92 243 3.0E-43 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 PANTHER PTHR12029 7 245 4.7E-64 T 20-04-2016 APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 SUPERFAMILY SSF55315 2 76 2.94E-12 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 SUPERFAMILY SSF75217 88 244 5.76E-40 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS13900 59074ae83cb3977729d3b74f9e5a54ca 245 SMART SM00967 6 80 4.4E-14 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 93 3.0E-30 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 PANTHER PTHR21012:SF0 2 110 3.7E-53 T 20-04-2016 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 Gene3D G3DSA:2.40.40.20 1 113 2.9E-48 T 20-04-2016 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 PIRSF PIRSF006246 1 116 1.8E-44 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 116 60.66 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 PANTHER PTHR21012 2 110 3.7E-53 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 113 2.8E-42 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 Pfam PF02261 Aspartate decarboxylase 1 113 1.5E-46 T 20-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APS56_RS12060 07b0fc30bd18651924718c6d8317bf4c 116 SUPERFAMILY SSF50692 1 114 4.6E-43 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 SUPERFAMILY SSF53720 5 397 6.73E-80 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 Gene3D G3DSA:3.40.605.10 5 204 6.9E-69 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 Gene3D G3DSA:3.40.605.10 356 397 6.9E-69 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 PANTHER PTHR11063:SF8 5 397 3.9E-108 T 20-04-2016 APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 Pfam PF00171 Aldehyde dehydrogenase family 5 267 3.2E-11 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 PIRSF PIRSF000151 2 397 1.8E-120 T 20-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 397 29.355 T 20-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 Gene3D G3DSA:3.40.309.10 207 355 2.6E-30 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APS56_RS07490 230e9afbd915ee4aaed728df71c7f696 397 PANTHER PTHR11063 5 397 3.9E-108 T 20-04-2016 APS56_RS04105 3141909243b7c38fb41dbc005d598a42 343 Pfam PF13481 AAA domain 35 210 1.3E-17 T 20-04-2016 APS56_RS04105 3141909243b7c38fb41dbc005d598a42 343 Gene3D G3DSA:3.40.50.300 39 239 4.4E-14 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04105 3141909243b7c38fb41dbc005d598a42 343 SUPERFAMILY SSF52540 48 259 4.65E-11 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16280 b08b2ff07a84e799e0c54abe3c08a59c 347 PANTHER PTHR30518 1 347 1.9E-51 T 20-04-2016 APS56_RS16280 b08b2ff07a84e799e0c54abe3c08a59c 347 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 339 1.4E-47 T 20-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APS56_RS16280 b08b2ff07a84e799e0c54abe3c08a59c 347 PANTHER PTHR30518:SF2 1 347 1.9E-51 T 20-04-2016 APS56_RS16280 b08b2ff07a84e799e0c54abe3c08a59c 347 Gene3D G3DSA:3.30.160.60 306 340 4.7E-8 T 20-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APS56_RS16280 b08b2ff07a84e799e0c54abe3c08a59c 347 Pfam PF02618 YceG-like family 43 334 1.2E-61 T 20-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PANTHER PTHR30330 122 531 1.0E-170 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PANTHER PTHR30330 55 95 1.0E-170 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PANTHER PTHR30330:SF3 122 531 1.0E-170 T 20-04-2016 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PANTHER PTHR30330:SF3 55 95 1.0E-170 T 20-04-2016 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 TIGRFAM TIGR00835 agcS: amino acid carrier protein 119 518 4.5E-112 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 Pfam PF01235 Sodium:alanine symporter family 121 525 2.8E-128 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PRINTS PR00175 Sodium/alanine symporter signature 426 448 1.58E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PRINTS PR00175 Sodium/alanine symporter signature 286 305 1.58E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PRINTS PR00175 Sodium/alanine symporter signature 376 394 1.58E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PRINTS PR00175 Sodium/alanine symporter signature 156 178 1.58E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PRINTS PR00175 Sodium/alanine symporter signature 258 276 1.58E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS05625 2fba570026c257de4b26e615d8589be4 540 PRINTS PR00175 Sodium/alanine symporter signature 487 507 1.58E-47 T 20-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 SUPERFAMILY SSF56935 327 395 5.95E-85 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 SUPERFAMILY SSF56935 949 1036 5.95E-85 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 SUPERFAMILY SSF56935 434 787 5.95E-85 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 SUPERFAMILY SSF56935 106 267 5.95E-85 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 SUPERFAMILY SSF56935 865 908 5.95E-85 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1037 1.7E-260 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 215 245 2.7E-20 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Pfam PF13715 CarboxypepD_reg-like domain 24 104 6.6E-14 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 SUPERFAMILY SSF49464 23 103 2.22E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 PANTHER PTHR11532 516 1037 2.6E-251 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 PANTHER PTHR11532 410 471 2.6E-251 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 PANTHER PTHR11532 5 187 2.6E-251 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 PANTHER PTHR11532 206 371 2.6E-251 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 239 1.3E-24 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Gene3D G3DSA:2.170.130.10 113 242 1.5E-23 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 PANTHER PTHR11532:SF57 516 1037 2.6E-251 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 PANTHER PTHR11532:SF57 410 471 2.6E-251 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 PANTHER PTHR11532:SF57 5 187 2.6E-251 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 PANTHER PTHR11532:SF57 206 371 2.6E-251 T 20-04-2016 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Gene3D G3DSA:2.40.170.20 243 265 6.5E-50 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Gene3D G3DSA:2.40.170.20 440 795 6.5E-50 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Gene3D G3DSA:2.40.170.20 938 1036 6.5E-50 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Gene3D G3DSA:2.40.170.20 326 404 6.5E-50 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Gene3D G3DSA:2.40.170.20 873 898 6.5E-50 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04580 8d638ee1a10ae1161d0d9c404ab014ad 1040 Gene3D G3DSA:2.60.40.1120 24 112 4.4E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 PANTHER PTHR31339:SF0 233 457 6.7E-26 T 20-04-2016 APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 Pfam PF00295 Glycosyl hydrolases family 28 249 445 1.1E-16 T 20-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 Gene3D G3DSA:2.160.20.10 157 501 1.4E-51 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 SMART SM00710 310 331 1800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 SMART SM00710 285 309 26.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 SMART SM00710 366 390 5700.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 SMART SM00710 186 207 2300.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 PANTHER PTHR31339 233 457 6.7E-26 T 20-04-2016 APS56_RS05975 c56eca8a81013c2d867a21e9c30326f9 513 SUPERFAMILY SSF51126 172 500 2.14E-44 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 Gene3D G3DSA:2.130.10.10 164 343 4.0E-8 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 SUPERFAMILY SSF103088 513 630 1.96E-28 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 Gene3D G3DSA:1.25.40.10 16 118 2.9E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 Pfam PF00691 OmpA family 524 610 3.7E-16 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 SUPERFAMILY SSF48452 13 115 9.32E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 PANTHER PTHR30128 515 606 6.2E-26 T 20-04-2016 APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 SUPERFAMILY SSF82171 161 409 3.01E-11 T 20-04-2016 APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 PRINTS PR01021 OMPA domain signature 525 547 1.7E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 PRINTS PR01021 OMPA domain signature 570 586 1.7E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 PRINTS PR01021 OMPA domain signature 555 570 1.7E-10 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 Gene3D G3DSA:3.30.1330.60 511 631 1.9E-31 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 Pfam PF07676 WD40-like Beta Propeller Repeat 266 300 0.007 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS12950 0021dec8954953dda98adcc05095e9d7 632 Pfam PF07676 WD40-like Beta Propeller Repeat 204 230 5.4E-4 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS05730 42f9fabbbf5b13ad6682f3a405dcccc9 227 SMART SM00382 30 215 1.8E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS05730 42f9fabbbf5b13ad6682f3a405dcccc9 227 PANTHER PTHR24220 7 204 5.3E-81 T 20-04-2016 APS56_RS05730 42f9fabbbf5b13ad6682f3a405dcccc9 227 SUPERFAMILY SSF52540 7 222 4.18E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05730 42f9fabbbf5b13ad6682f3a405dcccc9 227 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS05730 42f9fabbbf5b13ad6682f3a405dcccc9 227 Gene3D G3DSA:3.40.50.300 4 220 5.6E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05730 42f9fabbbf5b13ad6682f3a405dcccc9 227 Pfam PF00005 ABC transporter 21 169 5.1E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS05730 42f9fabbbf5b13ad6682f3a405dcccc9 227 PANTHER PTHR24220:SF470 7 204 5.3E-81 T 20-04-2016 APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 PANTHER PTHR11017 648 657 4.1E-170 T 20-04-2016 APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 PANTHER PTHR11017 93 568 4.1E-170 T 20-04-2016 APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 604 671 3.3E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 Gene3D G3DSA:3.80.10.10 315 543 5.3E-26 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 Gene3D G3DSA:3.80.10.10 210 313 5.5E-10 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 Gene3D G3DSA:3.80.10.10 106 209 4.7E-9 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 Pfam PF13306 Leucine rich repeats (6 copies) 93 204 3.8E-37 T 20-04-2016 IPR026906 Leucine rich repeat 5 APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 Pfam PF13306 Leucine rich repeats (6 copies) 341 470 2.3E-41 T 20-04-2016 IPR026906 Leucine rich repeat 5 APS56_RS10975 a4c25acabda513bad6ce235df94259ce 672 SUPERFAMILY SSF52058 127 520 1.94E-40 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS00925 67bc538b092a1f344aaf4d9bc380435d 476 PANTHER PTHR23515 7 403 1.6E-125 T 20-04-2016 APS56_RS00925 67bc538b092a1f344aaf4d9bc380435d 476 Pfam PF07690 Major Facilitator Superfamily 29 388 7.1E-31 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS00925 67bc538b092a1f344aaf4d9bc380435d 476 PANTHER PTHR23515:SF2 7 403 1.6E-125 T 20-04-2016 APS56_RS00925 67bc538b092a1f344aaf4d9bc380435d 476 Gene3D G3DSA:1.20.1250.20 240 456 7.3E-13 T 20-04-2016 APS56_RS00925 67bc538b092a1f344aaf4d9bc380435d 476 Gene3D G3DSA:1.20.1250.20 23 218 3.3E-26 T 20-04-2016 APS56_RS00925 67bc538b092a1f344aaf4d9bc380435d 476 SUPERFAMILY SSF103473 18 398 2.62E-54 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS00925 67bc538b092a1f344aaf4d9bc380435d 476 SUPERFAMILY SSF103473 429 445 2.62E-54 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS07005 0afdec81a776d8ee0aa642adde8a6173 211 Gene3D G3DSA:3.40.630.40 28 199 1.0E-47 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APS56_RS07005 0afdec81a776d8ee0aa642adde8a6173 211 PANTHER PTHR30404:SF0 29 198 9.7E-45 T 20-04-2016 APS56_RS07005 0afdec81a776d8ee0aa642adde8a6173 211 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 31 203 1.2E-44 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APS56_RS07005 0afdec81a776d8ee0aa642adde8a6173 211 SMART SM00646 92 208 1.6E-20 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APS56_RS07005 0afdec81a776d8ee0aa642adde8a6173 211 SUPERFAMILY SSF53187 29 203 4.19E-42 T 20-04-2016 APS56_RS07005 0afdec81a776d8ee0aa642adde8a6173 211 PANTHER PTHR30404 29 198 9.7E-45 T 20-04-2016 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 PIRSF PIRSF500136 1 426 8.8E-148 T 20-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 184 8.7E-34 T 20-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 SUPERFAMILY SSF52413 306 419 8.24E-26 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 209 297 1.2E-23 T 20-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 Gene3D G3DSA:3.40.50.720 239 422 1.2E-40 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02130 9da71738496f6e767f1432eb62519039 427 PANTHER PTHR11374:SF25 2 421 6.1E-215 T 20-04-2016 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 SUPERFAMILY SSF51735 6 197 8.79E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02130 9da71738496f6e767f1432eb62519039 427 SMART SM00984 324 421 4.5E-25 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 1.0E-17 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 Gene3D G3DSA:3.40.50.720 2 229 1.8E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02130 9da71738496f6e767f1432eb62519039 427 PIRSF PIRSF000124 5 424 3.4E-50 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 PANTHER PTHR11374 2 421 6.1E-215 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 SUPERFAMILY SSF48179 208 299 4.08E-24 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS02130 9da71738496f6e767f1432eb62519039 427 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 6 415 2.2E-118 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS07610 dfc4b71bc00b871b7ae65703f740305b 213 Pfam PF00293 NUDIX domain 58 168 2.0E-10 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APS56_RS07610 dfc4b71bc00b871b7ae65703f740305b 213 Gene3D G3DSA:3.90.79.10 47 210 6.5E-26 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS07610 dfc4b71bc00b871b7ae65703f740305b 213 SUPERFAMILY SSF55811 47 202 1.9E-28 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS07610 dfc4b71bc00b871b7ae65703f740305b 213 PANTHER PTHR12992 47 205 2.7E-30 T 20-04-2016 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 3 397 36.278 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 46 64 7.6E-18 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 66 78 7.6E-18 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 256 275 7.6E-18 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 173 186 7.6E-18 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 354 367 7.6E-18 T 20-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 Gene3D G3DSA:2.40.37.10 252 398 1.1E-44 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PANTHER PTHR11482:SF5 1 404 1.6E-137 T 20-04-2016 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 2 396 2.1E-119 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01181 Diaminopimelate decarboxylase signature 148 157 1.7E-20 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01181 Diaminopimelate decarboxylase signature 364 386 1.7E-20 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01181 Diaminopimelate decarboxylase signature 64 81 1.7E-20 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PRINTS PR01181 Diaminopimelate decarboxylase signature 284 302 1.7E-20 T 20-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 SUPERFAMILY SSF51419 14 268 1.0E-66 T 20-04-2016 IPR029066 PLP-binding barrel APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 22 266 2.8E-46 T 20-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 SUPERFAMILY SSF50621 248 397 1.88E-47 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 46 64 - T 20-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 273 374 1.9E-15 T 20-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 PANTHER PTHR11482 1 404 1.6E-137 T 20-04-2016 APS56_RS04275 8742b24c1b8567c16ad9bd9a2414c81f 405 Gene3D G3DSA:3.20.20.10 23 251 2.5E-63 T 20-04-2016 IPR029066 PLP-binding barrel APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 PANTHER PTHR10342 276 451 2.3E-126 T 20-04-2016 APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 PANTHER PTHR10342 1 248 2.3E-126 T 20-04-2016 APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 ProSitePatterns PS00523 Sulfatases signature 1. 40 52 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 Gene3D G3DSA:3.40.720.10 1 380 4.2E-97 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 Pfam PF00884 Sulfatase 1 330 5.3E-63 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 PANTHER PTHR10342:SF199 276 451 2.3E-126 T 20-04-2016 APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 PANTHER PTHR10342:SF199 1 248 2.3E-126 T 20-04-2016 APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 Gene3D G3DSA:3.30.1120.10 381 437 1.4E-8 T 20-04-2016 APS56_RS09685 55139b13f9c63e3ab6d99824b3f7f025 483 SUPERFAMILY SSF53649 1 429 1.89E-114 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS00455 6ca2d421ff63a091083eb83a0fe2f399 95 Gene3D G3DSA:3.30.70.100 1 63 1.0E-7 T 20-04-2016 APS56_RS00455 6ca2d421ff63a091083eb83a0fe2f399 95 SUPERFAMILY SSF55008 1 64 6.41E-10 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 Pfam PF07624 Protein of unknown function (DUF1585) 1237 1311 9.5E-21 T 20-04-2016 IPR011478 Domain of unknown function DUF1585 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 Pfam PF07637 Protein of unknown function (DUF1595) 912 971 8.0E-19 T 20-04-2016 IPR013043 Domain of unknown function DUF1595 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 Pfam PF07631 Protein of unknown function (DUF1592) 983 1106 6.2E-35 T 20-04-2016 IPR013042 Domain of unknown function DUF1592 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 SUPERFAMILY SSF46626 335 411 3.82E-8 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 339 409 4.9E-6 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 Gene3D G3DSA:1.10.760.10 340 427 1.1E-7 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 SUPERFAMILY SSF46626 211 286 4.36E-6 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 Pfam PF07627 Protein of unknown function (DUF1588) 1125 1222 9.9E-29 T 20-04-2016 IPR013039 Domain of unknown function DUF1588 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 Pfam PF07626 Protein of unknown function (DUF1587) 429 493 7.7E-16 T 20-04-2016 IPR013036 Domain of unknown function DUF1587 APS56_RS01015 38f38c4c03c43847eac6c5ed6599fbf7 1325 Pfam PF07635 Planctomycete cytochrome C 221 268 1.7E-5 T 20-04-2016 IPR011429 Cytochrome C, Planctomycete APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 4 595 4.3E-268 T 20-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 Pfam PF03144 Elongation factor Tu domain 2 217 286 1.4E-9 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 Pfam PF00009 Elongation factor Tu GTP binding domain 3 194 1.1E-54 T 20-04-2016 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 Gene3D G3DSA:2.40.30.10 203 301 4.4E-23 T 20-04-2016 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 Gene3D G3DSA:3.40.50.300 3 202 1.8E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 SMART SM00838 393 480 0.0089 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 PANTHER PTHR23115:SF14 3 587 1.6E-248 T 20-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 43 58 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 PANTHER PTHR23115 3 587 1.6E-248 T 20-04-2016 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 SUPERFAMILY SSF50447 151 297 2.65E-28 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 PRINTS PR00315 GTP-binding elongation factor signature 70 80 2.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 2.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 PRINTS PR00315 GTP-binding elongation factor signature 122 131 2.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 PRINTS PR00315 GTP-binding elongation factor signature 50 58 2.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 PRINTS PR00315 GTP-binding elongation factor signature 86 97 2.9E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 Gene3D G3DSA:2.40.50.250 479 573 4.5E-39 T 20-04-2016 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 Gene3D G3DSA:3.30.70.870 302 397 5.4E-36 T 20-04-2016 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 SUPERFAMILY SSF54980 396 509 9.59E-26 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 Gene3D G3DSA:3.30.70.240 398 478 6.8E-28 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 SUPERFAMILY SSF54980 300 385 8.99E-15 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 143 1.5E-21 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 Pfam PF00679 Elongation factor G C-terminus 394 477 7.7E-21 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APS56_RS05785 e6076308a0321f7b561899bb036ac2c2 599 SUPERFAMILY SSF52540 3 201 6.47E-56 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 PANTHER PTHR10381:SF22 32 223 1.7E-104 T 20-04-2016 APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 PANTHER PTHR10381 32 223 1.7E-104 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 34 224 40.079 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 Pfam PF00574 Clp protease 48 223 9.9E-77 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 SUPERFAMILY SSF52096 44 221 1.79E-65 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 PRINTS PR00127 Clp protease catalytic subunit P signature 142 161 4.9E-47 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 PRINTS PR00127 Clp protease catalytic subunit P signature 199 218 4.9E-47 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 PRINTS PR00127 Clp protease catalytic subunit P signature 90 110 4.9E-47 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 PRINTS PR00127 Clp protease catalytic subunit P signature 121 138 4.9E-47 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 PRINTS PR00127 Clp protease catalytic subunit P signature 50 65 4.9E-47 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS13170 e0d5cc712add4240ec730ca82e5d73cf 224 Gene3D G3DSA:3.90.226.10 47 222 1.1E-76 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS15755 4886b494d95af5be5d82d42b40cea33b 754 Gene3D G3DSA:3.40.50.1010 637 685 6.7E-5 T 20-04-2016 IPR029060 PIN domain-like APS56_RS15755 4886b494d95af5be5d82d42b40cea33b 754 Gene3D G3DSA:3.40.50.1010 474 494 6.7E-5 T 20-04-2016 IPR029060 PIN domain-like APS56_RS15755 4886b494d95af5be5d82d42b40cea33b 754 Pfam PF09822 ABC-type uncharacterized transport system 286 558 3.4E-32 T 20-04-2016 IPR019196 ABC-type uncharacterised transport system APS56_RS15755 4886b494d95af5be5d82d42b40cea33b 754 Pfam PF12679 ABC-2 family transporter protein 7 195 5.3E-9 T 20-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APS56_RS15755 4886b494d95af5be5d82d42b40cea33b 754 PANTHER PTHR30294:SF5 1 269 1.6E-15 T 20-04-2016 APS56_RS15755 4886b494d95af5be5d82d42b40cea33b 754 PANTHER PTHR30294 1 269 1.6E-15 T 20-04-2016 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 PANTHER PTHR30069:SF1 365 643 2.5E-30 T 20-04-2016 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 PANTHER PTHR30069:SF1 22 347 2.5E-30 T 20-04-2016 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 220 1.8E-9 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 SUPERFAMILY SSF56935 104 458 6.11E-79 T 20-04-2016 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 SUPERFAMILY SSF56935 501 792 6.11E-79 T 20-04-2016 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 PANTHER PTHR30069 365 643 2.5E-30 T 20-04-2016 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 PANTHER PTHR30069 22 347 2.5E-30 T 20-04-2016 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 Pfam PF13715 CarboxypepD_reg-like domain 24 108 2.0E-22 T 20-04-2016 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 SUPERFAMILY SSF49464 22 106 4.45E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 Gene3D G3DSA:2.170.130.10 103 218 1.7E-6 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 Gene3D G3DSA:2.60.40.1120 24 98 1.3E-16 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 Gene3D G3DSA:2.40.170.20 498 760 3.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10885 67af2ed95e028a990a8393ce9a6bc399 792 Gene3D G3DSA:2.40.170.20 229 455 3.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 Gene3D G3DSA:3.40.50.2300 2 128 4.4E-29 T 20-04-2016 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 Gene3D G3DSA:1.10.10.10 144 198 2.1E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 SUPERFAMILY SSF46894 140 199 1.16E-14 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 Pfam PF00072 Response regulator receiver domain 6 116 1.4E-19 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 SMART SM00448 4 116 2.8E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 SMART SM00421 142 199 3.5E-11 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 197 5.7E-15 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 SUPERFAMILY SSF52172 1 152 1.57E-31 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 4.8E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 4.8E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 4.8E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13295 9c0e4ab1f4391e946170e8ba238816b9 205 PANTHER PTHR26402 4 198 1.2E-43 T 20-04-2016 APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 PANTHER PTHR30069 426 692 1.9E-22 T 20-04-2016 APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 PANTHER PTHR30069 9 355 1.9E-22 T 20-04-2016 APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 Pfam PF07715 TonB-dependent Receptor Plug Domain 129 226 5.6E-12 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 SUPERFAMILY SSF49464 25 108 7.06E-11 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 Pfam PF13715 CarboxypepD_reg-like domain 26 114 5.9E-9 T 20-04-2016 APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 Gene3D G3DSA:2.60.40.1120 26 112 1.2E-8 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 Gene3D G3DSA:2.40.170.20 231 812 6.7E-40 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 SUPERFAMILY SSF56935 108 812 7.69E-61 T 20-04-2016 APS56_RS11445 b843de158eb32b422d80cce73e2f2948 818 Gene3D G3DSA:2.170.130.10 113 230 1.2E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11610 789ce8eb8045167f6664aeea1986e6ac 167 Gene3D G3DSA:1.10.10.10 16 89 9.9E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS11610 789ce8eb8045167f6664aeea1986e6ac 167 SUPERFAMILY SSF46785 13 147 4.79E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 Gene3D G3DSA:3.10.150.10 248 371 1.0E-33 T 20-04-2016 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 117 1.4E-20 T 20-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 SMART SM00480 17 363 1.6E-78 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 242 2.0E-22 T 20-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 369 1.8E-79 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 PANTHER PTHR30478 2 372 1.3E-101 T 20-04-2016 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 PIRSF PIRSF000804 1 371 2.0E-99 T 20-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 367 6.1E-22 T 20-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 SUPERFAMILY SSF55979 126 243 7.85E-24 T 20-04-2016 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 Gene3D G3DSA:3.10.150.10 1 117 4.7E-22 T 20-04-2016 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 Gene3D G3DSA:3.10.150.10 125 247 1.6E-30 T 20-04-2016 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 SUPERFAMILY SSF55979 1 116 5.3E-23 T 20-04-2016 APS56_RS00460 be55ae45dd835d6f6327b5759c9bd8c7 372 SUPERFAMILY SSF55979 245 370 3.77E-30 T 20-04-2016 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 Pfam PF04542 Sigma-70 region 2 24 89 2.6E-14 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 SUPERFAMILY SSF88946 5 92 6.02E-22 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 Pfam PF04545 Sigma-70, region 4 124 172 1.2E-10 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 PANTHER PTHR30173:SF31 1 173 6.2E-39 T 20-04-2016 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 172 7.2E-24 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 Gene3D G3DSA:1.10.1740.10 5 96 9.2E-24 T 20-04-2016 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 SUPERFAMILY SSF88659 113 174 1.64E-12 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 78 - T 20-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 Gene3D G3DSA:1.10.10.10 115 174 3.8E-13 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS14760 8a813e79cd50825211e210bfb001972a 176 PANTHER PTHR30173 1 173 6.2E-39 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 SUPERFAMILY SSF56935 429 644 8.7E-72 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 SUPERFAMILY SSF56935 936 1005 8.7E-72 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 SUPERFAMILY SSF56935 323 402 8.7E-72 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 SUPERFAMILY SSF56935 680 782 8.7E-72 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 SUPERFAMILY SSF56935 849 895 8.7E-72 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 SUPERFAMILY SSF56935 113 257 8.7E-72 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 Pfam PF07715 TonB-dependent Receptor Plug Domain 123 229 3.2E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 Gene3D G3DSA:2.170.130.10 124 239 2.8E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 SUPERFAMILY SSF49464 34 113 6.41E-17 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 Gene3D G3DSA:2.60.40.1120 35 123 1.0E-12 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 Pfam PF13715 CarboxypepD_reg-like domain 35 115 2.7E-16 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 PANTHER PTHR11532:SF57 1 449 2.2E-298 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 PANTHER PTHR11532:SF57 528 1020 2.2E-298 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 205 235 2.0E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 34 1022 1.6E-283 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 PANTHER PTHR11532 1 449 2.2E-298 T 20-04-2016 APS56_RS13720 a248f6651c9db2546795ad805ee936ee 1022 PANTHER PTHR11532 528 1020 2.2E-298 T 20-04-2016 APS56_RS04775 de1b65e6d2e33c85614b8b4c30b9f016 1006 PANTHER PTHR22925 44 404 1.3E-73 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS04775 de1b65e6d2e33c85614b8b4c30b9f016 1006 Pfam PF17132 alpha-L-rhamnosidase 39 175 2.3E-48 T 20-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM APS56_RS04775 de1b65e6d2e33c85614b8b4c30b9f016 1006 Pfam PF17132 alpha-L-rhamnosidase 179 735 1.6E-154 T 20-04-2016 IPR033400 Alpha-L-rhamnosidase RhaM APS56_RS04775 de1b65e6d2e33c85614b8b4c30b9f016 1006 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 838 932 6.9E-8 T 20-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS04775 de1b65e6d2e33c85614b8b4c30b9f016 1006 Gene3D G3DSA:2.60.120.260 808 924 2.0E-16 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS04775 de1b65e6d2e33c85614b8b4c30b9f016 1006 Gene3D G3DSA:2.60.120.260 969 999 2.0E-16 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS04775 de1b65e6d2e33c85614b8b4c30b9f016 1006 PANTHER PTHR22925:SF40 44 404 1.3E-73 T 20-04-2016 APS56_RS04775 de1b65e6d2e33c85614b8b4c30b9f016 1006 SUPERFAMILY SSF49785 808 931 2.83E-16 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS09690 9c0252355af4746466ff9cf82daec799 530 Gene3D G3DSA:2.60.40.1180 411 503 1.6E-6 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS09690 9c0252355af4746466ff9cf82daec799 530 Gene3D G3DSA:3.20.20.80 30 409 9.4E-90 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS09690 9c0252355af4746466ff9cf82daec799 530 Pfam PF01120 Alpha-L-fucosidase 26 405 9.6E-88 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS09690 9c0252355af4746466ff9cf82daec799 530 SUPERFAMILY SSF51445 33 409 1.97E-84 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS09690 9c0252355af4746466ff9cf82daec799 530 SMART SM00812 32 450 7.4E-113 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS09690 9c0252355af4746466ff9cf82daec799 530 Pfam PF16757 Alpha-L-fucosidase C-terminal domain 418 499 1.0E-7 T 20-04-2016 IPR031919 Alpha-L-fucosidase, C-terminal KEGG: 00511+3.2.1.51 APS56_RS09690 9c0252355af4746466ff9cf82daec799 530 PANTHER PTHR10030 1 195 7.7E-78 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS09690 9c0252355af4746466ff9cf82daec799 530 PANTHER PTHR10030 229 447 7.7E-78 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS02690 25065b1913b49706aa52730c1b746b5c 136 SUPERFAMILY SSF141571 2 107 3.66E-16 T 20-04-2016 APS56_RS02690 25065b1913b49706aa52730c1b746b5c 136 Pfam PF13599 Pentapeptide repeats (9 copies) 2 66 7.4E-11 T 20-04-2016 IPR001646 Pentapeptide repeat APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 Pfam PF00158 Sigma-54 interaction domain 145 309 1.7E-63 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 Gene3D G3DSA:1.10.10.60 390 445 2.7E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 Gene3D G3DSA:3.40.50.300 143 315 2.0E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 Pfam PF02954 Bacterial regulatory protein, Fis family 406 442 2.4E-14 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 SMART SM00448 2 113 1.3E-34 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 Gene3D G3DSA:1.10.8.60 316 389 5.8E-21 T 20-04-2016 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 Pfam PF00072 Response regulator receiver domain 4 113 3.6E-27 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 SUPERFAMILY SSF52172 1 186 2.13E-39 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-35 T 20-04-2016 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 PANTHER PTHR32071:SF18 1 445 4.2E-186 T 20-04-2016 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 20-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 SUPERFAMILY SSF52540 145 386 1.04E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 20-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 SMART SM00382 163 306 1.1E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 SUPERFAMILY SSF46689 356 445 7.47E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 PANTHER PTHR32071 1 445 4.2E-186 T 20-04-2016 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 445 2.4E-10 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 2.4E-10 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS10995 7d9430cdd77a16d04d6cbe73114663b3 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 229 244 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 42.261 T 20-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 Gene3D G3DSA:3.30.70.1400 52 139 1.2E-28 T 20-04-2016 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 PANTHER PTHR13847:SF5 4 357 2.7E-69 T 20-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 264 355 6.8E-24 T 20-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 SUPERFAMILY SSF101790 272 359 7.68E-25 T 20-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 Gene3D G3DSA:2.40.30.110 277 354 1.1E-28 T 20-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 PANTHER PTHR13847 4 357 2.7E-69 T 20-04-2016 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 PIRSF PIRSF006487 1 359 2.3E-101 T 20-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 SUPERFAMILY SSF103025 1 278 1.73E-93 T 20-04-2016 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 Gene3D G3DSA:3.30.1360.120 140 234 6.1E-51 T 20-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 Gene3D G3DSA:3.30.1360.120 2 51 6.1E-51 T 20-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 6.6E-122 T 20-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APS56_RS03595 f3a9201e3886e60fa206c493098e190c 359 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 257 1.8E-94 T 20-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 SUPERFAMILY SSF52402 156 281 8.37E-11 T 20-04-2016 APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 Gene3D G3DSA:3.40.50.620 155 282 2.4E-6 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 PRINTS PR01438 Universal stress protein signature 1 11 7.8E-10 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 PRINTS PR01438 Universal stress protein signature 108 120 7.8E-10 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 PRINTS PR01438 Universal stress protein signature 126 148 7.8E-10 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 Gene3D G3DSA:3.40.50.620 1 149 7.1E-20 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 Pfam PF00582 Universal stress protein family 100 148 1.5E-9 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 Pfam PF00582 Universal stress protein family 1 42 5.9E-5 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 PANTHER PTHR31964 1 154 9.4E-13 T 20-04-2016 APS56_RS00610 fa891027bef15a1cce5bb668d8bb38fa 283 SUPERFAMILY SSF52402 1 159 7.7E-23 T 20-04-2016 APS56_RS09390 8d104cf6e902a67c814e87b68f963401 193 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 5 185 8.5E-34 T 20-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APS56_RS09390 8d104cf6e902a67c814e87b68f963401 193 PANTHER PTHR33508 1 192 8.5E-46 T 20-04-2016 APS56_RS09390 8d104cf6e902a67c814e87b68f963401 193 Pfam PF01914 MarC family integral membrane protein 5 192 4.5E-40 T 20-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APS56_RS09390 8d104cf6e902a67c814e87b68f963401 193 PANTHER PTHR33508:SF1 1 192 8.5E-46 T 20-04-2016 APS56_RS05240 755d417b733a1ec782f451a16950e05a 356 PANTHER PTHR12526 1 353 2.7E-32 T 20-04-2016 APS56_RS05240 755d417b733a1ec782f451a16950e05a 356 Pfam PF00534 Glycosyl transferases group 1 173 331 2.9E-25 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS05240 755d417b733a1ec782f451a16950e05a 356 SUPERFAMILY SSF53756 5 354 5.76E-50 T 20-04-2016 APS56_RS05240 755d417b733a1ec782f451a16950e05a 356 Pfam PF13439 Glycosyltransferase Family 4 12 160 4.4E-9 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS05240 755d417b733a1ec782f451a16950e05a 356 Gene3D G3DSA:3.40.50.2000 176 332 1.3E-9 T 20-04-2016 APS56_RS09100 30ba8682d84a9394cd52a02457d27a93 193 Gene3D G3DSA:1.10.1740.10 9 114 1.1E-9 T 20-04-2016 APS56_RS09100 30ba8682d84a9394cd52a02457d27a93 193 Pfam PF04542 Sigma-70 region 2 28 95 9.0E-5 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09100 30ba8682d84a9394cd52a02457d27a93 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 180 2.7E-14 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09100 30ba8682d84a9394cd52a02457d27a93 193 SUPERFAMILY SSF88946 8 105 1.41E-10 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS12100 9583e7bbca89ad672e54312603f6f4f9 206 Pfam PF01252 Signal peptidase (SPase) II 10 197 2.0E-32 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS12100 9583e7bbca89ad672e54312603f6f4f9 206 PANTHER PTHR33695 7 118 5.8E-24 T 20-04-2016 APS56_RS12100 9583e7bbca89ad672e54312603f6f4f9 206 PANTHER PTHR33695 145 163 5.8E-24 T 20-04-2016 APS56_RS12100 9583e7bbca89ad672e54312603f6f4f9 206 PANTHER PTHR33695 180 197 5.8E-24 T 20-04-2016 APS56_RS12100 9583e7bbca89ad672e54312603f6f4f9 206 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 206 13.077 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS12100 9583e7bbca89ad672e54312603f6f4f9 206 PANTHER PTHR33695:SF1 7 118 5.8E-24 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS12100 9583e7bbca89ad672e54312603f6f4f9 206 PANTHER PTHR33695:SF1 145 163 5.8E-24 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS12100 9583e7bbca89ad672e54312603f6f4f9 206 PANTHER PTHR33695:SF1 180 197 5.8E-24 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS02525 3f0da92c39838eb4c34ee6b6b2662677 127 Gene3D G3DSA:3.10.180.10 7 126 1.5E-25 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02525 3f0da92c39838eb4c34ee6b6b2662677 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 65 6.6E-5 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS56_RS02525 3f0da92c39838eb4c34ee6b6b2662677 127 SUPERFAMILY SSF54593 2 125 2.42E-16 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02525 3f0da92c39838eb4c34ee6b6b2662677 127 PANTHER PTHR33993:SF4 5 125 4.3E-40 T 20-04-2016 APS56_RS02525 3f0da92c39838eb4c34ee6b6b2662677 127 PANTHER PTHR33993 5 125 4.3E-40 T 20-04-2016 APS56_RS06875 3f0da92c39838eb4c34ee6b6b2662677 127 Gene3D G3DSA:3.10.180.10 7 126 1.5E-25 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06875 3f0da92c39838eb4c34ee6b6b2662677 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 65 6.6E-5 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS56_RS06875 3f0da92c39838eb4c34ee6b6b2662677 127 SUPERFAMILY SSF54593 2 125 2.42E-16 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06875 3f0da92c39838eb4c34ee6b6b2662677 127 PANTHER PTHR33993:SF4 5 125 4.3E-40 T 20-04-2016 APS56_RS06875 3f0da92c39838eb4c34ee6b6b2662677 127 PANTHER PTHR33993 5 125 4.3E-40 T 20-04-2016 APS56_RS00760 4b7b1605b4c01cc12928bb089dc00ea1 307 Gene3D G3DSA:3.40.50.300 6 171 4.0E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00760 4b7b1605b4c01cc12928bb089dc00ea1 307 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 6 302 26.572 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APS56_RS00760 4b7b1605b4c01cc12928bb089dc00ea1 307 SUPERFAMILY SSF52540 6 150 3.06E-18 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00760 4b7b1605b4c01cc12928bb089dc00ea1 307 PANTHER PTHR11088 6 293 1.2E-78 T 20-04-2016 APS56_RS00760 4b7b1605b4c01cc12928bb089dc00ea1 307 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 287 5.7E-84 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APS56_RS00760 4b7b1605b4c01cc12928bb089dc00ea1 307 Gene3D G3DSA:1.10.287.890 200 278 3.6E-28 T 20-04-2016 APS56_RS00760 4b7b1605b4c01cc12928bb089dc00ea1 307 Pfam PF01715 IPP transferase 39 279 1.2E-70 T 20-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APS56_RS10510 3b3c251fac1e705cdf132ba89e155550 157 SUPERFAMILY SSF53155 3 74 7.06E-17 T 20-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APS56_RS10510 3b3c251fac1e705cdf132ba89e155550 157 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 70 148 1.7E-30 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APS56_RS10510 3b3c251fac1e705cdf132ba89e155550 157 SUPERFAMILY SSF46767 68 149 1.44E-30 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APS56_RS10510 3b3c251fac1e705cdf132ba89e155550 157 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 119 125 - T 20-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 APS56_RS10510 3b3c251fac1e705cdf132ba89e155550 157 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 69 148 6.4E-35 T 20-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APS56_RS10510 3b3c251fac1e705cdf132ba89e155550 157 Gene3D G3DSA:1.10.10.10 68 150 3.9E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS10510 3b3c251fac1e705cdf132ba89e155550 157 PANTHER PTHR10815 5 148 1.9E-48 T 20-04-2016 APS56_RS10510 3b3c251fac1e705cdf132ba89e155550 157 PANTHER PTHR10815:SF5 5 148 1.9E-48 T 20-04-2016 APS56_RS12570 b2b5a4a78fcf48be8a26f994d4acbd4c 243 Gene3D G3DSA:2.40.50.40 135 205 5.5E-22 T 20-04-2016 APS56_RS12570 b2b5a4a78fcf48be8a26f994d4acbd4c 243 SMART SM00448 5 113 3.9E-19 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS12570 b2b5a4a78fcf48be8a26f994d4acbd4c 243 PANTHER PTHR26402 5 112 8.3E-28 T 20-04-2016 APS56_RS12570 b2b5a4a78fcf48be8a26f994d4acbd4c 243 Pfam PF04397 LytTr DNA-binding domain 146 234 4.6E-17 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS12570 b2b5a4a78fcf48be8a26f994d4acbd4c 243 SMART SM00850 144 237 1.0E-23 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS12570 b2b5a4a78fcf48be8a26f994d4acbd4c 243 SUPERFAMILY SSF52172 5 123 2.85E-24 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS12570 b2b5a4a78fcf48be8a26f994d4acbd4c 243 Pfam PF00072 Response regulator receiver domain 8 113 2.1E-19 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS12570 b2b5a4a78fcf48be8a26f994d4acbd4c 243 Gene3D G3DSA:3.40.50.2300 4 116 8.5E-26 T 20-04-2016 APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 PANTHER PTHR13794:SF8 1 333 3.6E-62 T 20-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 SUPERFAMILY SSF51604 117 338 3.01E-48 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 Pfam PF13378 Enolase C-terminal domain-like 132 331 5.3E-23 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 SMART SM00922 129 227 3.1E-16 T 20-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 PANTHER PTHR13794 1 333 3.6E-62 T 20-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 SUPERFAMILY SSF54826 1 100 2.47E-15 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 Gene3D G3DSA:3.20.20.120 128 339 1.3E-60 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 Gene3D G3DSA:3.30.390.10 1 100 1.2E-33 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APS56_RS00190 a5529e9fac9ab9ff805efb5660b98534 345 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 177 208 - T 20-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APS56_RS07945 b67b2b97bd4fcde346e3991ce286d0e6 275 PIRSF PIRSF000883 13 257 2.2E-31 T 20-04-2016 IPR011152 Phosphoesterase MJ0912 APS56_RS07945 b67b2b97bd4fcde346e3991ce286d0e6 275 Gene3D G3DSA:3.60.21.10 14 254 5.1E-49 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS07945 b67b2b97bd4fcde346e3991ce286d0e6 275 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 23 213 6.1E-12 T 20-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APS56_RS07945 b67b2b97bd4fcde346e3991ce286d0e6 275 SUPERFAMILY SSF56300 14 253 1.98E-29 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS12895 bf5e49000b34bf818cdc45f13a65be65 127 Pfam PF05036 Sporulation related domain 54 122 5.0E-7 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 APS56_RS12895 bf5e49000b34bf818cdc45f13a65be65 127 SUPERFAMILY SSF110997 52 123 5.89E-5 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 APS56_RS12110 df5eef0dde6e4107d09389cf0642dc4f 187 PANTHER PTHR23407 1 187 6.6E-35 T 20-04-2016 APS56_RS12110 df5eef0dde6e4107d09389cf0642dc4f 187 PANTHER PTHR23407:SF1 1 187 6.6E-35 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APS56_RS12110 df5eef0dde6e4107d09389cf0642dc4f 187 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 180 1.4E-36 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APS56_RS12110 df5eef0dde6e4107d09389cf0642dc4f 187 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 180 6.1E-30 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APS56_RS12110 df5eef0dde6e4107d09389cf0642dc4f 187 SUPERFAMILY SSF100950 1 186 3.49E-37 T 20-04-2016 APS56_RS12110 df5eef0dde6e4107d09389cf0642dc4f 187 Gene3D G3DSA:3.40.50.10420 2 186 2.8E-37 T 20-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APS56_RS12110 df5eef0dde6e4107d09389cf0642dc4f 187 PIRSF PIRSF006806 1 184 3.7E-34 T 20-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APS56_RS03065 85f5f39d757dee1ce2a4ac1bbd78df48 370 SUPERFAMILY SSF51445 40 177 1.0E-7 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS03065 85f5f39d757dee1ce2a4ac1bbd78df48 370 Pfam PF02638 Glycosyl hydrolase-like 10 54 327 8.8E-11 T 20-04-2016 IPR003790 Glycosyl hydrolase-like 10 APS56_RS03065 85f5f39d757dee1ce2a4ac1bbd78df48 370 SUPERFAMILY SSF51445 227 353 6.48E-5 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 SUPERFAMILY SSF52210 250 392 7.85E-50 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 Gene3D G3DSA:3.30.470.20 99 247 1.6E-54 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 PIRSF PIRSF001554 1 396 7.9E-141 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 PANTHER PTHR11815 1 391 1.1E-197 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 Pfam PF08442 ATP-grasp domain 2 210 1.8E-66 T 20-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 PANTHER PTHR11815:SF1 1 391 1.1E-197 T 20-04-2016 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 Gene3D G3DSA:3.40.50.261 251 393 2.4E-61 T 20-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 38.772 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 266 291 - T 20-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 Gene3D G3DSA:3.30.1490.20 21 98 3.0E-30 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 393 1.6E-139 T 20-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 Pfam PF00549 CoA-ligase 271 390 8.1E-25 T 20-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS04270 afd07fbedfd3ba1ae299c0c5d79ca114 396 SUPERFAMILY SSF56059 1 247 7.88E-71 T 20-04-2016 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 446 2.3E-39 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Pfam PF12705 PD-(D/E)XK nuclease superfamily 902 1030 3.2E-7 T 20-04-2016 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 SUPERFAMILY SSF52540 105 191 4.03E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 SUPERFAMILY SSF52540 332 746 4.03E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 SUPERFAMILY SSF52540 6 63 4.03E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 SUPERFAMILY SSF52540 796 836 4.03E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 PANTHER PTHR11070:SF24 795 1029 3.6E-67 T 20-04-2016 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 PANTHER PTHR11070:SF24 304 754 3.6E-67 T 20-04-2016 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 PANTHER PTHR11070:SF24 9 70 3.6E-67 T 20-04-2016 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 PANTHER PTHR11070:SF24 105 214 3.6E-67 T 20-04-2016 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 PANTHER PTHR11070 795 1029 3.6E-67 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 PANTHER PTHR11070 304 754 3.6E-67 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 PANTHER PTHR11070 9 70 3.6E-67 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 PANTHER PTHR11070 105 214 3.6E-67 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Gene3D G3DSA:3.40.50.300 9 59 8.0E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Gene3D G3DSA:3.40.50.300 342 446 8.0E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Gene3D G3DSA:3.40.50.300 113 173 8.0E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Pfam PF13361 UvrD-like helicase C-terminal domain 713 820 6.4E-11 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Pfam PF13361 UvrD-like helicase C-terminal domain 460 604 2.4E-7 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Gene3D G3DSA:3.40.50.300 712 826 4.5E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11375 184702e3b04b22f715b5e0d87d801db4 1048 Gene3D G3DSA:3.40.50.300 462 574 4.5E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01480 e6fe46c12ade5bb9705cacb647f64861 411 PANTHER PTHR30203 24 396 5.1E-24 T 20-04-2016 APS56_RS01480 e6fe46c12ade5bb9705cacb647f64861 411 Pfam PF02321 Outer membrane efflux protein 28 206 1.7E-16 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS01480 e6fe46c12ade5bb9705cacb647f64861 411 Pfam PF02321 Outer membrane efflux protein 231 409 2.5E-20 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS01480 e6fe46c12ade5bb9705cacb647f64861 411 Gene3D G3DSA:1.20.1600.10 15 407 6.3E-44 T 20-04-2016 APS56_RS01480 e6fe46c12ade5bb9705cacb647f64861 411 SUPERFAMILY SSF56954 5 405 5.75E-59 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Pfam PF07495 Y_Y_Y domain 715 774 6.5E-12 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SUPERFAMILY SSF63829 87 332 1.14E-14 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SUPERFAMILY SSF63829 399 419 1.14E-14 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SUPERFAMILY SSF46689 1288 1338 7.62E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1035 1048 1.3E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 978 992 1.3E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1011 1029 1.3E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Gene3D G3DSA:2.120.10.30 180 297 2.4E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Gene3D G3DSA:2.120.10.30 361 462 2.6E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Gene3D G3DSA:2.120.10.30 495 612 4.2E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SMART SM00448 1090 1202 5.6E-29 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 827 882 1.1E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 940 1050 6.5E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SUPERFAMILY SSF47384 816 888 1.28E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SMART SM00387 939 1051 2.5E-27 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SUPERFAMILY SSF50998 358 602 1.02E-10 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PANTHER PTHR24423:SF487 399 437 7.0E-93 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PANTHER PTHR24423:SF487 61 149 7.0E-93 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PANTHER PTHR24423:SF487 801 1244 7.0E-93 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SMART SM00388 825 883 0.0099 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PANTHER PTHR24423 399 437 7.0E-93 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PANTHER PTHR24423 61 149 7.0E-93 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 PANTHER PTHR24423 801 1244 7.0E-93 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Pfam PF12833 Helix-turn-helix domain 1259 1336 1.2E-14 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Gene3D G3DSA:1.10.287.130 825 884 1.9E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SUPERFAMILY SSF55874 889 1050 1.22E-34 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Gene3D G3DSA:3.30.565.10 894 1054 6.8E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Gene3D G3DSA:3.40.50.2300 1084 1213 6.7E-36 T 20-04-2016 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SUPERFAMILY SSF52172 1088 1206 1.71E-31 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 SMART SM00342 1252 1335 1.4E-19 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1286 1331 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Pfam PF00072 Response regulator receiver domain 1092 1202 3.0E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Pfam PF07494 Two component regulator propeller 395 416 3.2E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS06270 a0b8a86b207b8b71bd7dfe4bffd3ea2e 1356 Gene3D G3DSA:1.10.10.60 1288 1337 6.5E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15160 411aa790c209622213b27f6738d9b912 308 SUPERFAMILY SSF49899 57 308 1.27E-28 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15160 411aa790c209622213b27f6738d9b912 308 Gene3D G3DSA:2.60.120.200 49 308 3.4E-59 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15160 411aa790c209622213b27f6738d9b912 308 Pfam PF08787 Alginate lyase 57 308 2.0E-53 T 20-04-2016 IPR014895 Alginate lyase 2 APS56_RS03460 1e3c5954b90c0145906037c9a5908d77 443 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 438 7.4E-145 T 20-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APS56_RS03460 1e3c5954b90c0145906037c9a5908d77 443 PANTHER PTHR30365:SF0 1 438 9.3E-166 T 20-04-2016 APS56_RS03460 1e3c5954b90c0145906037c9a5908d77 443 PANTHER PTHR30365 1 438 9.3E-166 T 20-04-2016 APS56_RS03460 1e3c5954b90c0145906037c9a5908d77 443 PIRSF PIRSF006446 1 443 1.5E-143 T 20-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APS56_RS03460 1e3c5954b90c0145906037c9a5908d77 443 SUPERFAMILY SSF144091 176 229 8.89E-6 T 20-04-2016 APS56_RS03460 1e3c5954b90c0145906037c9a5908d77 443 SUPERFAMILY SSF144091 321 367 8.89E-6 T 20-04-2016 APS56_RS08170 ff7ba2bd44b242776a381b1268bc93f9 235 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 3 233 1.5E-101 T 20-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APS56_RS08170 ff7ba2bd44b242776a381b1268bc93f9 235 PIRSF PIRSF005650 1 235 1.2E-93 T 20-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APS56_RS08170 ff7ba2bd44b242776a381b1268bc93f9 235 Pfam PF00696 Amino acid kinase family 4 213 1.0E-26 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS08170 ff7ba2bd44b242776a381b1268bc93f9 235 SUPERFAMILY SSF53633 1 233 1.13E-69 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS08170 ff7ba2bd44b242776a381b1268bc93f9 235 Gene3D G3DSA:3.40.1160.10 1 233 2.8E-84 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS08170 ff7ba2bd44b242776a381b1268bc93f9 235 PANTHER PTHR21499:SF23 1 233 7.7E-113 T 20-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APS56_RS08170 ff7ba2bd44b242776a381b1268bc93f9 235 Hamap MF_01220_B Uridylate kinase [pyrH]. 1 234 45.227 T 20-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APS56_RS08170 ff7ba2bd44b242776a381b1268bc93f9 235 PANTHER PTHR21499 1 233 7.7E-113 T 20-04-2016 APS56_RS02585 a55b99ad5b691a030e409a5b00909d16 117 Pfam PF13788 Domain of unknown function (DUF4180) 9 117 1.8E-39 T 20-04-2016 IPR025438 Domain of unknown function DUF4180 APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 Pfam PF00994 Probable molybdopterin binding domain 4 170 1.8E-35 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 SMART SM00852 4 172 2.7E-34 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 413 8.3E-94 T 20-04-2016 IPR008135 Competence-induced protein CinA APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 Pfam PF02464 Competence-damaged protein 260 412 5.0E-49 T 20-04-2016 IPR008136 CinA, C-terminal APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 SUPERFAMILY SSF53218 2 191 3.66E-39 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 266 411 2.3E-39 T 20-04-2016 IPR008136 CinA, C-terminal APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 PIRSF PIRSF006728 1 416 4.5E-121 T 20-04-2016 IPR008135 Competence-induced protein CinA APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 Gene3D G3DSA:3.90.950.20 255 414 7.2E-50 T 20-04-2016 IPR008136 CinA, C-terminal APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 PANTHER PTHR13939 1 416 6.6E-141 T 20-04-2016 APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 167 2.5E-28 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 SUPERFAMILY SSF142433 257 414 8.63E-46 T 20-04-2016 IPR008136 CinA, C-terminal APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 Gene3D G3DSA:3.40.980.10 131 170 2.1E-36 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 Gene3D G3DSA:3.40.980.10 2 86 2.1E-36 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 PANTHER PTHR13939:SF0 1 416 6.6E-141 T 20-04-2016 APS56_RS16550 55e29f4ba83410c3b31b25b4565dbc56 416 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 416 127.655 T 20-04-2016 IPR008135 Competence-induced protein CinA APS56_RS09635 087ffb525fe040321fade2ac174c85be 553 Gene3D G3DSA:1.25.40.10 218 347 3.4E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09635 087ffb525fe040321fade2ac174c85be 553 Gene3D G3DSA:1.25.40.10 407 494 3.4E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09635 087ffb525fe040321fade2ac174c85be 553 Pfam PF07980 SusD family 290 551 8.2E-34 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS09635 087ffb525fe040321fade2ac174c85be 553 Pfam PF14322 Starch-binding associating with outer membrane 79 234 8.5E-13 T 20-04-2016 APS56_RS09635 087ffb525fe040321fade2ac174c85be 553 SUPERFAMILY SSF48452 17 551 8.22E-87 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 97 108 - T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 Pfam PF01116 Fructose-bisphosphate aldolase class-II 14 353 1.8E-93 T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 12 354 2.1E-112 T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 SUPERFAMILY SSF51569 4 354 2.49E-131 T 20-04-2016 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 PANTHER PTHR30559:SF0 1 355 1.9E-238 T 20-04-2016 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 Gene3D G3DSA:3.20.20.70 8 353 1.4E-128 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 PANTHER PTHR30559 1 355 1.9E-238 T 20-04-2016 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 PIRSF PIRSF001359 10 355 6.1E-94 T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 354 5.1E-177 T 20-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS14320 ac7cc6abd0ff663ebe8a83aafc053c00 355 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 168 179 - T 20-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APS56_RS13775 580a22b592b39244e9a760d0d51d073a 356 Pfam PF03702 Uncharacterised protein family (UPF0075) 8 355 3.5E-65 T 20-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APS56_RS13775 580a22b592b39244e9a760d0d51d073a 356 SUPERFAMILY SSF53067 143 311 3.46E-14 T 20-04-2016 APS56_RS13775 580a22b592b39244e9a760d0d51d073a 356 SUPERFAMILY SSF53067 70 113 3.46E-14 T 20-04-2016 APS56_RS13775 580a22b592b39244e9a760d0d51d073a 356 Gene3D G3DSA:3.30.420.40 6 192 3.9E-50 T 20-04-2016 APS56_RS13775 580a22b592b39244e9a760d0d51d073a 356 PANTHER PTHR30605 1 356 2.1E-89 T 20-04-2016 APS56_RS04540 23fbdc686fa7bab22e078c38907b57d9 344 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 5 342 1.4E-112 T 20-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS04540 23fbdc686fa7bab22e078c38907b57d9 344 PANTHER PTHR11938 6 340 1.9E-79 T 20-04-2016 APS56_RS04540 23fbdc686fa7bab22e078c38907b57d9 344 Pfam PF01180 Dihydroorotate dehydrogenase 50 344 5.2E-89 T 20-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APS56_RS04540 23fbdc686fa7bab22e078c38907b57d9 344 SUPERFAMILY SSF51395 1 342 3.66E-95 T 20-04-2016 APS56_RS04540 23fbdc686fa7bab22e078c38907b57d9 344 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 340 42.721 T 20-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS04540 23fbdc686fa7bab22e078c38907b57d9 344 Gene3D G3DSA:3.20.20.70 1 342 1.4E-118 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS04540 23fbdc686fa7bab22e078c38907b57d9 344 PIRSF PIRSF000164 16 344 6.3E-97 T 20-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APS56_RS04540 23fbdc686fa7bab22e078c38907b57d9 344 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 296 316 - T 20-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APS56_RS06635 a62b5f43e3586779f073b025f72bd70e 508 PANTHER PTHR22935:SF68 32 446 3.2E-83 T 20-04-2016 APS56_RS06635 a62b5f43e3586779f073b025f72bd70e 508 Pfam PF00144 Beta-lactamase 33 363 1.6E-59 T 20-04-2016 IPR001466 Beta-lactamase-related APS56_RS06635 a62b5f43e3586779f073b025f72bd70e 508 PANTHER PTHR22935 32 446 3.2E-83 T 20-04-2016 APS56_RS06635 a62b5f43e3586779f073b025f72bd70e 508 Pfam PF11954 Domain of unknown function (DUF3471) 410 500 1.3E-15 T 20-04-2016 IPR021860 Peptidase S12, Pab87-related, C-terminal APS56_RS06635 a62b5f43e3586779f073b025f72bd70e 508 SUPERFAMILY SSF56601 30 361 4.98E-77 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS06635 a62b5f43e3586779f073b025f72bd70e 508 Gene3D G3DSA:3.40.710.10 40 378 4.5E-75 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 183 243 1.4E-17 T 20-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 TIGRFAM TIGR00277 HDIG: HDIG domain 269 317 2.7E-7 T 20-04-2016 IPR006675 HDIG domain APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 Pfam PF01966 HD domain 259 347 1.1E-13 T 20-04-2016 IPR006674 HD domain APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 Gene3D G3DSA:1.10.3090.10 400 428 6.6E-60 T 20-04-2016 APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 Gene3D G3DSA:1.10.3090.10 153 331 6.6E-60 T 20-04-2016 APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 Gene3D G3DSA:3.30.460.10 10 152 6.0E-35 T 20-04-2016 APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 PANTHER PTHR13734:SF5 5 454 1.0E-100 T 20-04-2016 APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 SUPERFAMILY SSF81891 153 458 1.96E-61 T 20-04-2016 APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 Pfam PF01743 Poly A polymerase head domain 27 155 2.2E-25 T 20-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 PANTHER PTHR13734 5 454 1.0E-100 T 20-04-2016 APS56_RS04215 62771861976a00cb6df824ea8a059dc6 473 SUPERFAMILY SSF81301 18 152 7.3E-31 T 20-04-2016 APS56_RS14555 faefd8685a613da4f6fc04d7505e997d 770 Pfam PF07715 TonB-dependent Receptor Plug Domain 121 227 6.1E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS14555 faefd8685a613da4f6fc04d7505e997d 770 Gene3D G3DSA:2.40.170.20 230 765 6.6E-76 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14555 faefd8685a613da4f6fc04d7505e997d 770 SUPERFAMILY SSF56935 104 765 6.41E-97 T 20-04-2016 APS56_RS14555 faefd8685a613da4f6fc04d7505e997d 770 Pfam PF00593 TonB dependent receptor 510 765 6.3E-29 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14555 faefd8685a613da4f6fc04d7505e997d 770 PANTHER PTHR32552 96 768 9.4E-33 T 20-04-2016 APS56_RS14555 faefd8685a613da4f6fc04d7505e997d 770 Gene3D G3DSA:2.170.130.10 102 229 4.6E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 PANTHER PTHR21535 38 359 2.5E-67 T 20-04-2016 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 Gene3D G3DSA:1.20.58.340 282 359 1.2E-34 T 20-04-2016 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 Gene3D G3DSA:1.20.58.340 168 280 7.1E-38 T 20-04-2016 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 SUPERFAMILY SSF143865 16 293 6.93E-81 T 20-04-2016 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 Gene3D G3DSA:3.30.460.20 8 167 7.0E-48 T 20-04-2016 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 Pfam PF01544 CorA-like Mg2+ transporter protein 65 355 1.8E-74 T 20-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 SUPERFAMILY SSF144083 294 357 9.42E-24 T 20-04-2016 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 PANTHER PTHR21535:SF33 38 359 2.5E-67 T 20-04-2016 APS56_RS16080 610fd43c4c8577d606320db772aa018b 359 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 42 359 2.9E-97 T 20-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 SUPERFAMILY SSF50156 262 371 1.45E-19 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 SUPERFAMILY SSF50494 61 276 1.35E-62 T 20-04-2016 IPR009003 Peptidase S1, PA clan APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 Gene3D G3DSA:2.30.42.10 397 462 9.6E-7 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 SUPERFAMILY SSF50156 415 465 5.72E-6 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 1.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 PRINTS PR00834 HtrA/DegQ protease family signature 136 156 1.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 PRINTS PR00834 HtrA/DegQ protease family signature 115 127 1.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 1.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 PRINTS PR00834 HtrA/DegQ protease family signature 320 332 1.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 1.4E-51 T 20-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 62 460 1.6E-125 T 20-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 Gene3D G3DSA:2.40.10.10 57 171 1.0E-34 T 20-04-2016 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 PANTHER PTHR22939:SF79 62 375 1.2E-109 T 20-04-2016 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 Pfam PF13180 PDZ domain 294 371 5.9E-17 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 SMART SM00228 283 362 1.1E-9 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 Pfam PF13365 Trypsin-like peptidase domain 106 241 5.7E-33 T 20-04-2016 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 Gene3D G3DSA:2.30.42.10 283 375 2.0E-23 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 PANTHER PTHR22939 62 375 1.2E-109 T 20-04-2016 APS56_RS16265 a059ea62a01e7baa59a9cec9291b6844 470 Gene3D G3DSA:2.40.10.10 172 282 4.3E-42 T 20-04-2016 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 PIRSF PIRSF007663 12 822 3.1E-207 T 20-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 Gene3D G3DSA:2.70.98.50 24 413 3.2E-95 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 SUPERFAMILY SSF48208 297 712 7.65E-73 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 SUPERFAMILY SSF48208 750 804 7.65E-73 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 24 280 1.1E-51 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 PANTHER PTHR31084:SF0 41 708 2.4E-207 T 20-04-2016 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 PANTHER PTHR31084:SF0 750 803 2.4E-207 T 20-04-2016 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 PANTHER PTHR31084 41 708 2.4E-207 T 20-04-2016 APS56_RS09770 202c0c686eb117ab9878567d6aa3eac4 823 PANTHER PTHR31084 750 803 2.4E-207 T 20-04-2016 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 PIRSF PIRSF000171 1 519 1.2E-39 T 20-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 SUPERFAMILY SSF51905 6 262 6.28E-57 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 SUPERFAMILY SSF51905 354 412 6.28E-57 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 SUPERFAMILY SSF56425 235 350 3.14E-37 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 Gene3D G3DSA:3.50.50.60 4 240 3.9E-89 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 Gene3D G3DSA:3.50.50.60 347 398 3.9E-89 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 PANTHER PTHR11632:SF27 2 515 5.0E-230 T 20-04-2016 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 Pfam PF02910 Fumarate reductase flavoprotein C-term 438 515 8.5E-10 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 SUPERFAMILY SSF46977 424 515 1.57E-18 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 6 515 1.9E-154 T 20-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 1.0E-6 T 20-04-2016 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.0E-6 T 20-04-2016 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 PANTHER PTHR11632 2 515 5.0E-230 T 20-04-2016 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 Gene3D G3DSA:1.20.58.100 428 512 4.1E-21 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 Gene3D G3DSA:3.90.700.10 241 346 2.4E-38 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APS56_RS09480 ff83763ec244a2f3469cb448baa4a378 519 Pfam PF00890 FAD binding domain 7 390 4.8E-98 T 20-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 SUPERFAMILY SSF50156 67 183 7.06E-16 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 SMART SM00228 95 165 1.9E-7 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 Gene3D G3DSA:3.90.226.10 444 462 7.2E-58 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 Gene3D G3DSA:3.90.226.10 380 392 7.2E-58 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 Gene3D G3DSA:3.90.226.10 174 345 7.2E-58 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 PANTHER PTHR32060:SF0 28 346 1.2E-92 T 20-04-2016 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 SMART SM00245 165 352 7.9E-56 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 Gene3D G3DSA:3.30.750.44 58 100 9.0E-8 T 20-04-2016 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 SUPERFAMILY SSF52096 19 113 1.99E-68 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 SUPERFAMILY SSF52096 185 347 1.99E-68 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 Pfam PF13180 PDZ domain 97 173 4.8E-15 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 Pfam PF03572 Peptidase family S41 191 346 4.7E-48 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 Gene3D G3DSA:2.30.42.10 101 173 8.0E-17 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 53 347 1.2E-81 T 20-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APS56_RS10940 4c7bf2b9bba756a870b30e9d256ba360 544 PANTHER PTHR32060 28 346 1.2E-92 T 20-04-2016 APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.1E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 133 1.1E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.1E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.1E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.1E-20 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 Gene3D G3DSA:3.40.50.720 2 223 1.4E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PANTHER PTHR24322 146 177 4.4E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PANTHER PTHR24322 7 127 4.4E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 Pfam PF00106 short chain dehydrogenase 3 188 1.1E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 123 131 9.8E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 9.8E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 9.8E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06720 1c37bb24fdb17127ea58aec3485272d5 227 SUPERFAMILY SSF51735 3 224 1.38E-52 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02695 51566c2fc713047e5e0b2e488dde6889 416 Gene3D G3DSA:3.40.50.300 186 400 1.9E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02695 51566c2fc713047e5e0b2e488dde6889 416 PANTHER PTHR24220:SF557 190 387 9.3E-39 T 20-04-2016 APS56_RS02695 51566c2fc713047e5e0b2e488dde6889 416 SUPERFAMILY SSF52540 56 145 1.71E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02695 51566c2fc713047e5e0b2e488dde6889 416 Gene3D G3DSA:3.40.50.300 61 145 8.6E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02695 51566c2fc713047e5e0b2e488dde6889 416 Pfam PF00005 ABC transporter 204 355 9.9E-23 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS02695 51566c2fc713047e5e0b2e488dde6889 416 PANTHER PTHR24220 190 387 9.3E-39 T 20-04-2016 APS56_RS02695 51566c2fc713047e5e0b2e488dde6889 416 SUPERFAMILY SSF52540 168 401 4.05E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02695 51566c2fc713047e5e0b2e488dde6889 416 SMART SM00382 213 404 1.4E-5 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS03405 7672c9b8cf04c05f6e2fddc5118c5252 217 PANTHER PTHR18901:SF14 1 216 2.7E-43 T 20-04-2016 APS56_RS03405 7672c9b8cf04c05f6e2fddc5118c5252 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 181 1.1E-35 T 20-04-2016 IPR023214 HAD-like domain APS56_RS03405 7672c9b8cf04c05f6e2fddc5118c5252 217 SUPERFAMILY SSF56784 1 216 2.49E-54 T 20-04-2016 IPR023214 HAD-like domain APS56_RS03405 7672c9b8cf04c05f6e2fddc5118c5252 217 Gene3D G3DSA:3.40.50.1000 80 215 3.2E-34 T 20-04-2016 IPR023214 HAD-like domain APS56_RS03405 7672c9b8cf04c05f6e2fddc5118c5252 217 PANTHER PTHR18901 1 216 2.7E-43 T 20-04-2016 APS56_RS03405 7672c9b8cf04c05f6e2fddc5118c5252 217 Gene3D G3DSA:1.10.150.240 19 79 1.7E-12 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APS56_RS03405 7672c9b8cf04c05f6e2fddc5118c5252 217 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 20-04-2016 IPR000150 Cof protein GO:0016787 APS56_RS03405 7672c9b8cf04c05f6e2fddc5118c5252 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 90 179 3.2E-10 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS01410 0d4ef0d3cf8899480fb0012139d87bc7 578 Pfam PF13148 Protein of unknown function (DUF3987) 167 506 4.7E-68 T 20-04-2016 IPR025048 Protein of unknown function DUF3987) APS56_RS01410 0d4ef0d3cf8899480fb0012139d87bc7 578 Pfam PF08707 Primase C terminal 2 (PriCT-2) 42 116 1.4E-15 T 20-04-2016 IPR014819 Primase, C-terminal 2 GO:0016817 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 Pfam PF02357 Transcription termination factor nusG 7 113 1.9E-21 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 Gene3D G3DSA:3.30.70.940 6 118 4.3E-37 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 184 8.6E-56 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 SUPERFAMILY SSF50104 129 184 5.16E-18 T 20-04-2016 IPR008991 Translation protein SH3-like domain APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 SMART SM00739 130 157 3.6E-5 T 20-04-2016 IPR005824 KOW APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 PRINTS PR00338 Transcription termination factor NUSG signature 160 176 4.8E-16 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 PRINTS PR00338 Transcription termination factor NUSG signature 142 157 4.8E-16 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 4.8E-16 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 SMART SM00738 6 116 2.4E-33 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 PANTHER PTHR30265 6 184 3.7E-57 T 20-04-2016 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 SUPERFAMILY SSF82679 6 118 1.96E-32 T 20-04-2016 IPR006645 NusG, N-terminal GO:0006355 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 Pfam PF00467 KOW motif 133 165 7.6E-7 T 20-04-2016 IPR005824 KOW APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 184 23.262 T 20-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APS56_RS05555 f36595375f7aa7ecc418bf601a6ae61d 184 Gene3D G3DSA:2.30.30.30 123 184 1.0E-27 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 226 258 - T 20-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PANTHER PTHR21256 1 427 1.5E-211 T 20-04-2016 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 30 422 1.5E-155 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PIRSF PIRSF000099 1 426 5.6E-162 T 20-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 SUPERFAMILY SSF53720 9 423 1.31E-81 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PANTHER PTHR21256:SF2 1 427 1.5E-211 T 20-04-2016 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 Gene3D G3DSA:3.40.50.1980 24 236 1.7E-73 T 20-04-2016 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PRINTS PR00083 Histidinol dehydrogenase signature 131 157 1.8E-88 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PRINTS PR00083 Histidinol dehydrogenase signature 226 247 1.8E-88 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PRINTS PR00083 Histidinol dehydrogenase signature 196 221 1.8E-88 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PRINTS PR00083 Histidinol dehydrogenase signature 248 267 1.8E-88 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PRINTS PR00083 Histidinol dehydrogenase signature 316 341 1.8E-88 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PRINTS PR00083 Histidinol dehydrogenase signature 30 54 1.8E-88 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PRINTS PR00083 Histidinol dehydrogenase signature 166 192 1.8E-88 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 PRINTS PR00083 Histidinol dehydrogenase signature 357 375 1.8E-88 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 Pfam PF00815 Histidinol dehydrogenase 17 423 5.7E-165 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS01945 8c1bdd94cf2cb3115c1de5a4fbe9ff44 427 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 2 423 38.689 T 20-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 Pfam PF00085 Thioredoxin 3 95 8.3E-32 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 PIRSF PIRSF000077 2 98 4.6E-37 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 ProSitePatterns PS00194 Thioredoxin family active site. 15 33 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 PANTHER PTHR10438 4 94 1.0E-33 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 Gene3D G3DSA:3.40.30.10 3 96 3.6E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 PRINTS PR00421 Thioredoxin family signature 22 31 4.8E-9 T 20-04-2016 APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 PRINTS PR00421 Thioredoxin family signature 62 73 4.8E-9 T 20-04-2016 APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 PRINTS PR00421 Thioredoxin family signature 14 22 4.8E-9 T 20-04-2016 APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 SUPERFAMILY SSF52833 4 96 1.2E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS03455 e56f68bcbd0e7f18172f760075e350c0 98 TIGRFAM TIGR01068 thioredoxin: thioredoxin 4 96 2.0E-36 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APS56_RS07140 e44857d6d891e427e7ebb1d3b2e60589 274 Pfam PF13855 Leucine rich repeat 64 121 1.5E-7 T 20-04-2016 IPR001611 Leucine-rich repeat GO:0005515 APS56_RS07140 e44857d6d891e427e7ebb1d3b2e60589 274 Pfam PF13855 Leucine rich repeat 160 218 1.0E-6 T 20-04-2016 IPR001611 Leucine-rich repeat GO:0005515 APS56_RS07140 e44857d6d891e427e7ebb1d3b2e60589 274 Gene3D G3DSA:3.80.10.10 25 265 2.1E-57 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS07140 e44857d6d891e427e7ebb1d3b2e60589 274 SUPERFAMILY SSF52058 40 264 3.01E-49 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS07140 e44857d6d891e427e7ebb1d3b2e60589 274 PANTHER PTHR27000 7 242 5.6E-70 T 20-04-2016 APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 40.212 T 20-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 PANTHER PTHR23105:SF5 19 227 2.0E-70 T 20-04-2016 APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 Gene3D G3DSA:3.40.50.790 69 159 7.4E-38 T 20-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 Gene3D G3DSA:3.30.190.20 161 226 7.8E-43 T 20-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 Gene3D G3DSA:3.30.190.20 17 68 7.8E-43 T 20-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 4 226 8.2E-94 T 20-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 SUPERFAMILY SSF56808 6 226 4.84E-77 T 20-04-2016 IPR023674 Ribosomal protein L1-like APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 PANTHER PTHR23105 19 227 2.0E-70 T 20-04-2016 APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 PIRSF PIRSF002155 1 227 6.7E-71 T 20-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 Pfam PF00687 Ribosomal protein L1p/L10e family 33 220 3.7E-50 T 20-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APS56_RS05545 9ee12c0f4dabaa438d438d2084032a30 229 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 20-04-2016 IPR023673 Ribosomal protein L1, conserved site APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 Pfam PF00364 Biotin-requiring enzyme 87 158 1.1E-20 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 20-04-2016 IPR001882 Biotin-binding site APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 PANTHER PTHR23151:SF64 1 160 2.7E-39 T 20-04-2016 APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 Gene3D G3DSA:2.40.50.100 85 160 1.4E-27 T 20-04-2016 APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 SUPERFAMILY SSF51230 85 160 3.8E-22 T 20-04-2016 IPR011053 Single hybrid motif APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 161 5.0E-47 T 20-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 4.2E-17 T 20-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 4.2E-17 T 20-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 4.2E-17 T 20-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APS56_RS11190 0df7f6af4d918d3ce610b47c545df311 163 PANTHER PTHR23151 1 160 2.7E-39 T 20-04-2016 APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 SUPERFAMILY SSF52172 4 125 2.99E-39 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 PANTHER PTHR26402:SF606 6 231 2.5E-78 T 20-04-2016 APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 SMART SM00862 156 230 9.9E-12 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 230 4.0E-15 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 SMART SM00448 6 117 1.6E-40 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 Gene3D G3DSA:1.10.10.10 136 232 7.3E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 SUPERFAMILY SSF46894 138 232 2.01E-15 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 Gene3D G3DSA:3.40.50.2300 4 127 1.1E-40 T 20-04-2016 APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 PANTHER PTHR26402 6 231 2.5E-78 T 20-04-2016 APS56_RS16425 23ca040b407306b08ff06b59be9b6803 234 Pfam PF00072 Response regulator receiver domain 8 117 1.1E-29 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 Gene3D G3DSA:1.10.150.20 171 240 5.2E-21 T 20-04-2016 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 SUPERFAMILY SSF100879 243 343 3.3E-28 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 345 1.0E-17 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 Gene3D G3DSA:3.30.1490.100 246 345 1.3E-30 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 Pfam PF00817 impB/mucB/samB family 13 159 1.7E-51 T 20-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 Hamap MF_01113 DNA polymerase IV [dinB]. 7 363 38.114 T 20-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 Gene3D G3DSA:3.30.70.270 71 169 7.1E-35 T 20-04-2016 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 SUPERFAMILY SSF56672 6 239 3.74E-91 T 20-04-2016 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 PANTHER PTHR11076 8 344 2.9E-151 T 20-04-2016 APS56_RS11450 1a267f0f74ec0ec74fa49f6343c22552 365 Pfam PF11798 IMS family HHH motif 171 202 4.3E-7 T 20-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS02605 227333500ec8a59283e68d0084670c2a 129 SUPERFAMILY SSF54593 19 121 2.02E-9 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02605 227333500ec8a59283e68d0084670c2a 129 Gene3D G3DSA:3.10.180.10 14 117 1.3E-9 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 Gene3D G3DSA:3.40.50.620 176 278 3.8E-6 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 Gene3D G3DSA:3.40.50.620 1 147 2.4E-24 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 PANTHER PTHR31964:SF26 1 147 7.8E-20 T 20-04-2016 APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 SUPERFAMILY SSF52402 172 279 4.69E-11 T 20-04-2016 APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 PRINTS PR01438 Universal stress protein signature 124 146 8.1E-12 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 PRINTS PR01438 Universal stress protein signature 106 118 8.1E-12 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 PRINTS PR01438 Universal stress protein signature 1 19 8.1E-12 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 SUPERFAMILY SSF52402 1 156 3.01E-30 T 20-04-2016 APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 Pfam PF00582 Universal stress protein family 1 146 7.3E-18 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS00450 6c5900a6cac10b7e09b7c55b7862fb65 280 PANTHER PTHR31964 1 147 7.8E-20 T 20-04-2016 APS56_RS10090 42e3139e0c2efa3f60a4b130ffc35bde 458 Pfam PF06439 Domain of Unknown Function (DUF1080) 32 216 2.4E-45 T 20-04-2016 IPR010496 Domain of unknown function DUF1080 APS56_RS10090 42e3139e0c2efa3f60a4b130ffc35bde 458 Pfam PF06439 Domain of Unknown Function (DUF1080) 247 455 6.6E-47 T 20-04-2016 IPR010496 Domain of unknown function DUF1080 APS56_RS16620 e5b1eb787ecef5f173b8dd16873739d3 384 SUPERFAMILY SSF56059 116 304 1.09E-26 T 20-04-2016 APS56_RS16620 e5b1eb787ecef5f173b8dd16873739d3 384 Gene3D G3DSA:3.30.1490.20 116 195 2.8E-11 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS16620 e5b1eb787ecef5f173b8dd16873739d3 384 Gene3D G3DSA:3.40.50.20 22 115 1.6E-7 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS16620 e5b1eb787ecef5f173b8dd16873739d3 384 Gene3D G3DSA:3.30.470.20 199 308 2.1E-18 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS16620 e5b1eb787ecef5f173b8dd16873739d3 384 Pfam PF02655 ATP-grasp domain 114 283 3.6E-15 T 20-04-2016 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 PANTHER PTHR32481:SF10 6 358 1.4E-112 T 20-04-2016 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 PIRSF PIRSF001123 8 361 9.3E-90 T 20-04-2016 IPR008007 Peptidase M42 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 PANTHER PTHR32481 6 358 1.4E-112 T 20-04-2016 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 SUPERFAMILY SSF101821 77 183 2.44E-27 T 20-04-2016 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 Pfam PF05343 M42 glutamyl aminopeptidase 55 344 6.8E-75 T 20-04-2016 IPR008007 Peptidase M42 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 Gene3D G3DSA:2.40.30.40 78 165 2.4E-24 T 20-04-2016 IPR023367 Peptidase M42, domain 2 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 Gene3D G3DSA:3.40.630.10 9 77 1.2E-71 T 20-04-2016 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 Gene3D G3DSA:3.40.630.10 172 355 1.2E-71 T 20-04-2016 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 SUPERFAMILY SSF53187 178 351 5.74E-56 T 20-04-2016 APS56_RS00260 1100c0f8bc4f24a0dfe0f9ecde0160cb 362 SUPERFAMILY SSF53187 10 88 5.74E-56 T 20-04-2016 APS56_RS01755 5496a2928a2b54bb80970c8478564878 175 Gene3D G3DSA:2.40.160.20 19 175 5.7E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS01755 5496a2928a2b54bb80970c8478564878 175 Pfam PF13505 Outer membrane protein beta-barrel domain 6 175 7.7E-18 T 20-04-2016 IPR027385 Outer membrane protein beta-barrel APS56_RS01755 5496a2928a2b54bb80970c8478564878 175 SUPERFAMILY SSF56925 23 175 6.54E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 SUPERFAMILY SSF52283 8 196 5.67E-117 T 20-04-2016 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 SUPERFAMILY SSF52283 359 438 5.67E-117 T 20-04-2016 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 SMART SM00997 197 358 2.2E-106 T 20-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 Gene3D G3DSA:3.40.50.1480 359 438 4.4E-37 T 20-04-2016 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 219 236 - T 20-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 197 358 3.5E-78 T 20-04-2016 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 148 437 1.6E-62 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 146 5.8E-69 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 6 430 46.571 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 SUPERFAMILY SSF51735 197 358 5.69E-70 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 Gene3D G3DSA:3.40.50.720 235 312 5.7E-12 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 12 430 5.0E-189 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 82 96 - T 20-04-2016 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 PANTHER PTHR23420 12 438 0.0 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 SMART SM00996 10 437 3.0E-301 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 PIRSF PIRSF001109 2 438 2.2E-194 T 20-04-2016 IPR000043 Adenosylhomocysteinase GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|UniPathway: UPA00314 APS56_RS11940 e6ac2e2c53816e5528f9ad8a91b72ef2 438 Gene3D G3DSA:3.40.50.1480 11 234 2.2E-120 T 20-04-2016 APS56_RS08825 38b8847521a16cfb398206daa2959465 453 PANTHER PTHR10590 32 452 6.4E-165 T 20-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APS56_RS08825 38b8847521a16cfb398206daa2959465 453 Pfam PF07670 Nucleoside recognition 118 216 1.4E-8 T 20-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APS56_RS08825 38b8847521a16cfb398206daa2959465 453 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 229 451 6.9E-72 T 20-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APS56_RS08825 38b8847521a16cfb398206daa2959465 453 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 32 105 1.5E-22 T 20-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 5 574 1.1E-210 T 20-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 SUPERFAMILY SSF52540 1 252 3.25E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 10 289 2.0E-72 T 20-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 Gene3D G3DSA:3.40.50.300 317 569 6.7E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 Gene3D G3DSA:3.40.50.300 2 276 2.5E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 Pfam PF02374 Anion-transporting ATPase 484 566 6.0E-5 T 20-04-2016 IPR025723 Anion-transporting ATPase-like domain APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 Pfam PF02374 Anion-transporting ATPase 6 288 5.9E-75 T 20-04-2016 IPR025723 Anion-transporting ATPase-like domain APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 Pfam PF02374 Anion-transporting ATPase 330 469 8.8E-30 T 20-04-2016 IPR025723 Anion-transporting ATPase-like domain APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 SUPERFAMILY SSF52540 330 570 8.55E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 PANTHER PTHR10803 1 370 4.2E-78 T 20-04-2016 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 PIRSF PIRSF001327 1 589 3.6E-219 T 20-04-2016 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 APS56_RS00755 41a959dcfdac65db1c90e1597eb724f7 591 PANTHER PTHR10803:SF0 1 370 4.2E-78 T 20-04-2016 APS56_RS14545 8069240d026891eff98f42ff31d02e3f 133 Pfam PF00034 Cytochrome c 30 113 6.1E-10 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS14545 8069240d026891eff98f42ff31d02e3f 133 SUPERFAMILY SSF46626 1 119 8.24E-20 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS14545 8069240d026891eff98f42ff31d02e3f 133 PANTHER PTHR35008:SF5 25 133 1.4E-14 T 20-04-2016 APS56_RS14545 8069240d026891eff98f42ff31d02e3f 133 PANTHER PTHR35008 25 133 1.4E-14 T 20-04-2016 APS56_RS14545 8069240d026891eff98f42ff31d02e3f 133 Gene3D G3DSA:1.10.760.10 31 131 1.6E-25 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS01650 d390180ad9571b065d113d9a45b5d8de 179 PANTHER PTHR11608 1 179 6.5E-53 T 20-04-2016 APS56_RS01650 d390180ad9571b065d113d9a45b5d8de 179 SUPERFAMILY SSF53271 4 171 1.26E-33 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS01650 d390180ad9571b065d113d9a45b5d8de 179 Pfam PF00156 Phosphoribosyl transferase domain 4 154 1.2E-15 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APS56_RS01650 d390180ad9571b065d113d9a45b5d8de 179 Gene3D G3DSA:3.40.50.2020 3 172 2.1E-38 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 PANTHER PTHR11265 1 298 5.6E-107 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 SUPERFAMILY SSF81799 108 206 9.29E-29 T 20-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 SUPERFAMILY SSF53335 206 298 3.2E-41 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 SUPERFAMILY SSF53335 3 107 3.2E-41 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 Gene3D G3DSA:3.40.50.150 4 104 6.7E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 Gene3D G3DSA:3.40.50.150 209 298 6.7E-45 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 PANTHER PTHR11265:SF0 1 298 5.6E-107 T 20-04-2016 APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 PIRSF PIRSF004486 1 298 1.2E-90 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 Gene3D G3DSA:1.10.150.170 106 208 2.5E-29 T 20-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 Pfam PF01795 MraW methylase family 3 297 3.0E-88 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 297 5.3E-91 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS08495 2658be33ced94822be28c3b5179bdc10 298 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 298 34.072 T 20-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS00010 a60668e37000c205451c7efb6adb825b 170 SUPERFAMILY SSF56925 18 159 7.85E-14 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS00010 a60668e37000c205451c7efb6adb825b 170 Gene3D G3DSA:2.40.160.20 26 156 5.8E-13 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS00010 a60668e37000c205451c7efb6adb825b 170 Pfam PF13505 Outer membrane protein beta-barrel domain 17 156 1.9E-12 T 20-04-2016 IPR027385 Outer membrane protein beta-barrel APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 Pfam PF07730 Histidine kinase 477 535 2.6E-5 T 20-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 SUPERFAMILY SSF48452 140 288 6.45E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 Gene3D G3DSA:1.25.40.10 51 151 4.2E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 SUPERFAMILY SSF55874 574 670 2.88E-17 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 SMART SM00028 234 265 440.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 SMART SM00028 192 225 9.0E-5 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 SMART SM00028 316 349 190.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 SMART SM00387 581 671 0.0042 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 Gene3D G3DSA:1.25.40.10 207 404 4.8E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 584 670 1.8E-7 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 Gene3D G3DSA:1.25.40.10 152 206 4.6E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 PANTHER PTHR24421 397 671 2.7E-28 T 20-04-2016 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 SUPERFAMILY SSF48452 49 165 3.49E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 Gene3D G3DSA:3.30.565.10 569 671 6.6E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12750 deabead13ba90b1852d40e6a32caaa16 671 Pfam PF13424 Tetratricopeptide repeat 195 258 2.0E-11 T 20-04-2016 APS56_RS06205 ff83388b89278727a696658bf21012ef 337 Gene3D G3DSA:3.30.1490.20 115 205 7.0E-21 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS06205 ff83388b89278727a696658bf21012ef 337 PANTHER PTHR23132 94 309 8.3E-15 T 20-04-2016 APS56_RS06205 ff83388b89278727a696658bf21012ef 337 Gene3D G3DSA:3.40.50.20 2 114 7.4E-36 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS06205 ff83388b89278727a696658bf21012ef 337 SUPERFAMILY SSF56059 97 311 9.0E-25 T 20-04-2016 APS56_RS06205 ff83388b89278727a696658bf21012ef 337 Gene3D G3DSA:3.30.470.20 207 322 3.9E-25 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS06205 ff83388b89278727a696658bf21012ef 337 Pfam PF13535 ATP-grasp domain 149 288 1.0E-12 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 SUPERFAMILY SSF52540 4 293 1.59E-95 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PANTHER PTHR23115:SF66 266 294 0.0 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PANTHER PTHR23115:SF66 1 188 0.0 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PANTHER PTHR23115:SF66 314 703 0.0 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 SMART SM00838 612 699 1.1E-47 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Pfam PF14492 Elongation Factor G, domain II 415 488 3.0E-32 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Gene3D G3DSA:3.40.50.300 3 298 3.2E-95 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 TIGRFAM TIGR00484 EF-G: translation elongation factor G 3 704 0.0 T 20-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Gene3D G3DSA:2.40.30.10 317 415 6.8E-35 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 191 6.2E-31 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Pfam PF00679 Elongation factor G C-terminus 612 698 2.2E-28 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Gene3D G3DSA:3.30.70.870 416 491 1.3E-36 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 SUPERFAMILY SSF54980 615 702 7.19E-28 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Gene3D G3DSA:3.30.70.240 610 704 9.3E-32 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PANTHER PTHR23115 266 294 0.0 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PANTHER PTHR23115 1 188 0.0 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PANTHER PTHR23115 314 703 0.0 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PRINTS PR00315 GTP-binding elongation factor signature 105 116 4.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PRINTS PR00315 GTP-binding elongation factor signature 89 99 4.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PRINTS PR00315 GTP-binding elongation factor signature 141 150 4.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PRINTS PR00315 GTP-binding elongation factor signature 56 64 4.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 PRINTS PR00315 GTP-binding elongation factor signature 10 23 4.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 SUPERFAMILY SSF50447 276 415 4.29E-34 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 SUPERFAMILY SSF54211 490 610 4.05E-36 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 SMART SM00889 491 610 1.1E-54 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Pfam PF00009 Elongation factor Tu GTP binding domain 8 293 3.6E-62 T 20-04-2016 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Pfam PF03764 Elongation factor G, domain IV 490 610 1.9E-39 T 20-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 SUPERFAMILY SSF54980 413 491 5.76E-24 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 49 64 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Gene3D G3DSA:3.30.230.10 495 609 6.0E-42 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Hamap MF_00054_B Elongation factor G [fusA]. 4 703 102.631 T 20-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APS56_RS13935 76c4ce9fff254135d6caf4c19c1ce036 708 Pfam PF03144 Elongation factor Tu domain 2 335 401 1.8E-13 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 55 6.2E-7 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 Gene3D G3DSA:3.10.20.30 4 75 6.9E-28 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 SUPERFAMILY SSF54292 2 79 8.78E-26 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 Pfam PF01799 [2Fe-2S] binding domain 74 146 2.2E-27 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 PANTHER PTHR11908 3 147 2.7E-32 T 20-04-2016 APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 PANTHER PTHR11908:SF66 3 147 2.7E-32 T 20-04-2016 APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 Gene3D G3DSA:1.10.150.120 76 151 5.4E-30 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 SUPERFAMILY SSF47741 74 152 4.58E-30 T 20-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APS56_RS00875 0f830c0129bfa3f449ebc44c65c9d833 153 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APS56_RS07100 004851ec07fe162fdcf83df349f3c2fa 184 Gene3D G3DSA:1.10.357.10 3 173 7.0E-19 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APS56_RS07100 004851ec07fe162fdcf83df349f3c2fa 184 SUPERFAMILY SSF46689 3 68 5.99E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07100 004851ec07fe162fdcf83df349f3c2fa 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 50 1.1E-5 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS13160 9919d4c507944d223975b558ce7d2657 117 PANTHER PTHR37309 1 114 4.5E-29 T 20-04-2016 APS56_RS13160 9919d4c507944d223975b558ce7d2657 117 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 107 4.8E-29 T 20-04-2016 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV APS56_RS13160 9919d4c507944d223975b558ce7d2657 117 PANTHER PTHR37309:SF1 1 114 4.5E-29 T 20-04-2016 APS56_RS01130 eb00182d4405cf77e3625737ca494938 426 SUPERFAMILY SSF53649 30 415 2.18E-89 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS01130 eb00182d4405cf77e3625737ca494938 426 Gene3D G3DSA:3.30.1120.10 369 421 5.8E-8 T 20-04-2016 APS56_RS01130 eb00182d4405cf77e3625737ca494938 426 Pfam PF00884 Sulfatase 30 332 5.0E-51 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS01130 eb00182d4405cf77e3625737ca494938 426 Gene3D G3DSA:3.40.720.10 29 368 1.5E-79 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS01130 eb00182d4405cf77e3625737ca494938 426 PANTHER PTHR10342 2 405 9.9E-88 T 20-04-2016 APS56_RS01130 eb00182d4405cf77e3625737ca494938 426 PANTHER PTHR10342:SF199 2 405 9.9E-88 T 20-04-2016 APS56_RS01130 eb00182d4405cf77e3625737ca494938 426 ProSitePatterns PS00523 Sulfatases signature 1. 77 89 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 PANTHER PTHR11624 27 347 1.0E-53 T 20-04-2016 IPR033247 Transketolase family APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 PANTHER PTHR11624 448 754 1.0E-53 T 20-04-2016 IPR033247 Transketolase family APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 Gene3D G3DSA:3.40.50.920 660 791 4.0E-26 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 Gene3D G3DSA:3.40.50.970 486 659 8.4E-36 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 SUPERFAMILY SSF52518 455 649 4.71E-37 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 SMART SM00861 469 643 2.0E-14 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 PANTHER PTHR11624:SF21 27 347 1.0E-53 T 20-04-2016 APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 PANTHER PTHR11624:SF21 448 754 1.0E-53 T 20-04-2016 APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 Gene3D G3DSA:3.40.50.970 471 485 6.2E-90 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 Gene3D G3DSA:3.40.50.970 17 374 6.2E-90 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 SUPERFAMILY SSF52922 657 791 1.13E-22 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 Pfam PF02780 Transketolase, C-terminal domain 660 766 2.5E-20 T 20-04-2016 IPR033248 Transketolase, C-terminal domain APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 Pfam PF02779 Transketolase, pyrimidine binding domain 474 636 2.5E-15 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 SUPERFAMILY SSF52518 17 357 4.51E-48 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01540 498da780b94227aeee7c436fbcd443d6 803 Pfam PF00676 Dehydrogenase E1 component 44 353 4.3E-28 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 SMART SM00387 361 468 4.7E-25 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 PANTHER PTHR24423 34 69 8.1E-43 T 20-04-2016 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 PANTHER PTHR24423 201 467 8.1E-43 T 20-04-2016 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 Pfam PF00672 HAMP domain 173 240 1.1E-6 T 20-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 PANTHER PTHR24423:SF445 34 69 8.1E-43 T 20-04-2016 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 PANTHER PTHR24423:SF445 201 467 8.1E-43 T 20-04-2016 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 467 8.1E-21 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 SMART SM00388 254 325 5.8E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 3.6E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 447 3.6E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 3.6E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 466 3.6E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 SUPERFAMILY SSF47384 248 325 3.14E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 Gene3D G3DSA:1.10.287.130 249 311 2.8E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 Gene3D G3DSA:3.30.565.10 312 467 5.8E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 SUPERFAMILY SSF55874 323 467 3.27E-33 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10430 54592495bd82b3fd1052cb8088e7bd2c 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 322 1.5E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01825 9bfd8eba9a88ac778b3259f78349f466 242 Gene3D G3DSA:3.40.50.1010 4 141 2.4E-32 T 20-04-2016 IPR029060 PIN domain-like APS56_RS01825 9bfd8eba9a88ac778b3259f78349f466 242 Pfam PF12872 OST-HTH/LOTUS domain 164 231 2.9E-15 T 20-04-2016 IPR025605 OST-HTH/LOTUS domain APS56_RS01825 9bfd8eba9a88ac778b3259f78349f466 242 Pfam PF01936 NYN domain 6 141 4.3E-35 T 20-04-2016 IPR021139 NYN domain, limkain-b1-type APS56_RS01825 9bfd8eba9a88ac778b3259f78349f466 242 PANTHER PTHR35811:SF1 1 242 3.0E-56 T 20-04-2016 APS56_RS01825 9bfd8eba9a88ac778b3259f78349f466 242 PANTHER PTHR35811 1 242 3.0E-56 T 20-04-2016 APS56_RS06440 3f4d7140d525e874871933a00d223076 227 Pfam PF00005 ABC transporter 24 170 1.2E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS06440 3f4d7140d525e874871933a00d223076 227 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS06440 3f4d7140d525e874871933a00d223076 227 PANTHER PTHR24220:SF509 6 223 3.9E-93 T 20-04-2016 APS56_RS06440 3f4d7140d525e874871933a00d223076 227 SMART SM00382 33 219 1.4E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS06440 3f4d7140d525e874871933a00d223076 227 Gene3D G3DSA:3.40.50.300 3 224 4.1E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06440 3f4d7140d525e874871933a00d223076 227 PANTHER PTHR24220 6 223 3.9E-93 T 20-04-2016 APS56_RS06440 3f4d7140d525e874871933a00d223076 227 SUPERFAMILY SSF52540 4 224 6.07E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Pfam PF16353 Domain of unknown function(DUF4981) 651 737 1.2E-21 T 20-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 SUPERFAMILY SSF74650 749 1053 2.04E-79 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Pfam PF02929 Beta galactosidase small chain 765 1052 8.9E-70 T 20-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Gene3D G3DSA:2.70.98.10 748 1053 1.2E-84 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 351 641 1.3E-101 T 20-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 73 238 6.8E-41 T 20-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 SUPERFAMILY SSF49303 633 739 2.23E-24 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Gene3D G3DSA:2.60.40.320 637 738 9.9E-30 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 SUPERFAMILY SSF49785 33 240 1.34E-61 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Pfam PF00703 Glycosyl hydrolases family 2 242 348 9.8E-18 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 SUPERFAMILY SSF51445 350 637 2.11E-91 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 SMART SM01038 762 1053 3.0E-105 T 20-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 400 425 - T 20-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Gene3D G3DSA:2.60.120.260 29 229 2.4E-78 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Gene3D G3DSA:2.60.40.320 230 348 8.0E-32 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 SUPERFAMILY SSF49303 242 348 6.33E-26 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PANTHER PTHR10066:SF72 606 1052 0.0 T 20-04-2016 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PANTHER PTHR10066:SF72 17 586 0.0 T 20-04-2016 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PANTHER PTHR10066 606 1052 0.0 T 20-04-2016 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PANTHER PTHR10066 17 586 0.0 T 20-04-2016 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PRINTS PR00132 Glycosyl hydrolase family 2 signature 541 556 5.9E-34 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PRINTS PR00132 Glycosyl hydrolase family 2 signature 390 408 5.9E-34 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PRINTS PR00132 Glycosyl hydrolase family 2 signature 470 485 5.9E-34 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PRINTS PR00132 Glycosyl hydrolase family 2 signature 359 373 5.9E-34 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 PRINTS PR00132 Glycosyl hydrolase family 2 signature 168 183 5.9E-34 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 470 484 - T 20-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS11330 c15a2d9cb1d7f220cc000b230613eee7 1056 Gene3D G3DSA:3.20.20.80 351 635 2.1E-102 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS02515 1dbd0b5c297bc4686f8d72914c0a0a5f 229 SUPERFAMILY SSF46785 11 67 5.93E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02515 1dbd0b5c297bc4686f8d72914c0a0a5f 229 Pfam PF08279 HTH domain 12 64 8.3E-14 T 20-04-2016 IPR013196 Helix-turn-helix, type 11 APS56_RS02515 1dbd0b5c297bc4686f8d72914c0a0a5f 229 SMART SM00420 12 66 0.0082 T 20-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APS56_RS02515 1dbd0b5c297bc4686f8d72914c0a0a5f 229 PANTHER PTHR34580:SF3 1 228 2.3E-38 T 20-04-2016 APS56_RS02515 1dbd0b5c297bc4686f8d72914c0a0a5f 229 PANTHER PTHR34580 1 228 2.3E-38 T 20-04-2016 APS56_RS02515 1dbd0b5c297bc4686f8d72914c0a0a5f 229 Pfam PF13280 WYL domain 145 228 8.4E-13 T 20-04-2016 IPR026881 WYL domain APS56_RS02515 1dbd0b5c297bc4686f8d72914c0a0a5f 229 Gene3D G3DSA:1.10.10.10 5 68 2.0E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13930 6ab456a6a93246cf9fb0c316bfe840ae 158 ProSitePatterns PS00052 Ribosomal protein S7 signature. 19 45 - T 20-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 APS56_RS13930 6ab456a6a93246cf9fb0c316bfe840ae 158 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 2 157 6.8E-61 T 20-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APS56_RS13930 6ab456a6a93246cf9fb0c316bfe840ae 158 PIRSF PIRSF002122 2 158 3.3E-53 T 20-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APS56_RS13930 6ab456a6a93246cf9fb0c316bfe840ae 158 Gene3D G3DSA:1.10.455.10 6 158 9.6E-61 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APS56_RS13930 6ab456a6a93246cf9fb0c316bfe840ae 158 SUPERFAMILY SSF47973 2 153 1.7E-54 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APS56_RS13930 6ab456a6a93246cf9fb0c316bfe840ae 158 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 158 33.077 T 20-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APS56_RS13930 6ab456a6a93246cf9fb0c316bfe840ae 158 Pfam PF00177 Ribosomal protein S7p/S5e 2 151 3.0E-61 T 20-04-2016 IPR023798 Ribosomal protein S7 domain APS56_RS13930 6ab456a6a93246cf9fb0c316bfe840ae 158 PANTHER PTHR11205 1 158 1.0E-72 T 20-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 SUPERFAMILY SSF69065 19 163 1.24E-37 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 Gene3D G3DSA:1.10.1520.10 22 160 6.7E-37 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 PANTHER PTHR11207 22 235 6.2E-41 T 20-04-2016 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 SUPERFAMILY SSF54768 126 239 3.14E-19 T 20-04-2016 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 24 235 3.7E-54 T 20-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 ProSitePatterns PS00517 Ribonuclease III family signature. 59 67 - T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 Hamap MF_00104 Ribonuclease 3 [rnc]. 23 236 23.731 T 20-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 Pfam PF00035 Double-stranded RNA binding motif 174 235 1.6E-11 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 SMART SM00535 35 167 2.7E-26 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 Pfam PF14622 Ribonuclease-III-like 34 158 8.1E-25 T 20-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 Gene3D G3DSA:3.30.160.20 173 238 6.4E-15 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APS56_RS11425 b716a747489d49ead3ebb61ce1d2845d 247 SMART SM00358 174 240 8.0E-9 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 104 1.8E-31 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 82 95 - T 20-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 PANTHER PTHR30115 1 107 4.5E-34 T 20-04-2016 APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 SMART SM00938 4 104 3.7E-39 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 Gene3D G3DSA:3.30.70.120 1 110 6.4E-37 T 20-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 PRINTS PR00340 P-II protein signature 23 41 4.5E-22 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 PRINTS PR00340 P-II protein signature 2 17 4.5E-22 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 PRINTS PR00340 P-II protein signature 51 74 4.5E-22 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 PRINTS PR00340 P-II protein signature 82 102 4.5E-22 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09460 41c08a7ce807faddc84b110e107fb17d 112 SUPERFAMILY SSF54913 1 110 6.04E-34 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APS56_RS07550 4422e589e7f718ddad2e7a1c000e11b9 307 PANTHER PTHR12110 61 298 7.4E-31 T 20-04-2016 APS56_RS07550 4422e589e7f718ddad2e7a1c000e11b9 307 Gene3D G3DSA:3.20.20.150 44 286 1.2E-48 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS07550 4422e589e7f718ddad2e7a1c000e11b9 307 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 21 1.5E-4 T 20-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APS56_RS07550 4422e589e7f718ddad2e7a1c000e11b9 307 PANTHER PTHR12110:SF25 61 298 7.4E-31 T 20-04-2016 APS56_RS07550 4422e589e7f718ddad2e7a1c000e11b9 307 SUPERFAMILY SSF51658 57 298 1.96E-48 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS07550 4422e589e7f718ddad2e7a1c000e11b9 307 PIRSF PIRSF006241 41 305 5.9E-76 T 20-04-2016 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 APS56_RS07550 4422e589e7f718ddad2e7a1c000e11b9 307 Pfam PF01261 Xylose isomerase-like TIM barrel 69 253 1.0E-19 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 2 138 1.1E-36 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 PANTHER PTHR11717:SF7 1 138 3.7E-47 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 115 130 2.2E-15 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 72 87 2.2E-15 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 38 54 2.2E-15 T 20-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 Gene3D G3DSA:3.40.50.270 1 144 1.1E-46 T 20-04-2016 APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 SMART SM00226 2 143 9.7E-34 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 PANTHER PTHR11717 1 138 3.7E-47 T 20-04-2016 APS56_RS16300 3c3ccd7ce5a8d5b01d99de31e4e6a111 145 SUPERFAMILY SSF52788 1 144 5.23E-44 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 SUPERFAMILY SSF56935 454 519 4.27E-48 T 20-04-2016 APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 SUPERFAMILY SSF56935 115 380 4.27E-48 T 20-04-2016 APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 SUPERFAMILY SSF56935 856 939 4.27E-48 T 20-04-2016 APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 SUPERFAMILY SSF56935 548 825 4.27E-48 T 20-04-2016 APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 SUPERFAMILY SSF49464 24 98 1.19E-11 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 Gene3D G3DSA:2.60.40.1120 25 105 1.5E-10 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 Gene3D G3DSA:2.40.170.20 216 380 1.5E-34 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 Gene3D G3DSA:2.40.170.20 449 939 1.5E-34 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 Pfam PF13715 CarboxypepD_reg-like domain 25 97 1.1E-8 T 20-04-2016 APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 187 6.4E-5 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10020 6dea84567dffc6d9ed1fb5d0fe410744 939 Gene3D G3DSA:2.170.130.10 116 185 5.3E-4 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11200 506ed7f212857e1ba07e545dba25180c 235 PANTHER PTHR30400 1 230 2.1E-96 T 20-04-2016 APS56_RS11200 506ed7f212857e1ba07e545dba25180c 235 Gene3D G3DSA:1.10.3810.10 50 218 2.2E-59 T 20-04-2016 APS56_RS11200 506ed7f212857e1ba07e545dba25180c 235 PANTHER PTHR30400:SF0 1 230 2.1E-96 T 20-04-2016 APS56_RS11200 506ed7f212857e1ba07e545dba25180c 235 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 1 223 39.247 T 20-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 APS56_RS11200 506ed7f212857e1ba07e545dba25180c 235 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 4 220 1.7E-87 T 20-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 APS56_RS11200 506ed7f212857e1ba07e545dba25180c 235 Pfam PF00912 Transglycosylase 54 217 1.2E-50 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APS56_RS11200 506ed7f212857e1ba07e545dba25180c 235 SUPERFAMILY SSF53955 51 224 3.37E-57 T 20-04-2016 IPR023346 Lysozyme-like domain APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 Gene3D G3DSA:3.40.50.1260 1 178 8.8E-70 T 20-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PANTHER PTHR11406 2 395 1.8E-204 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 Pfam PF00162 Phosphoglycerate kinase 5 385 1.2E-151 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 3 395 38.995 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PIRSF PIRSF000724 1 395 2.4E-147 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 Gene3D G3DSA:3.40.50.1270 179 383 1.4E-81 T 20-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 SUPERFAMILY SSF53748 1 393 1.53E-146 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 107 122 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 135 157 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 8 24 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS10870 9562ff9efadaefe3563bdd1ebadaafef 395 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 5.0E-82 T 20-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APS56_RS11700 f7be08c8a12c64696c4a592e82becfee 606 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 149 1.9E-22 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11700 f7be08c8a12c64696c4a592e82becfee 606 Pfam PF00593 TonB dependent receptor 377 604 3.7E-21 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11700 f7be08c8a12c64696c4a592e82becfee 606 Gene3D G3DSA:2.40.170.20 156 605 1.6E-59 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11700 f7be08c8a12c64696c4a592e82becfee 606 Gene3D G3DSA:2.170.130.10 19 155 1.3E-34 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11700 f7be08c8a12c64696c4a592e82becfee 606 PANTHER PTHR32552:SF0 1 605 6.9E-34 T 20-04-2016 APS56_RS11700 f7be08c8a12c64696c4a592e82becfee 606 SUPERFAMILY SSF56935 29 605 6.11E-91 T 20-04-2016 APS56_RS11700 f7be08c8a12c64696c4a592e82becfee 606 PANTHER PTHR32552 1 605 6.9E-34 T 20-04-2016 APS56_RS02815 7c81b5641c78afb6c923133a7e430dad 51 Pfam PF01679 Proteolipid membrane potential modulator 3 47 5.9E-17 T 20-04-2016 IPR000612 Proteolipid membrane potential modulator GO:0016021 APS56_RS13465 55cdd7e8e08b843821b6c01dd2938a7e 145 PANTHER PTHR30373 14 140 3.2E-15 T 20-04-2016 APS56_RS13465 55cdd7e8e08b843821b6c01dd2938a7e 145 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 5 121 1.8E-24 T 20-04-2016 IPR007621 TPM domain APS56_RS13465 55cdd7e8e08b843821b6c01dd2938a7e 145 PANTHER PTHR30373:SF3 14 140 3.2E-15 T 20-04-2016 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Pfam PF10371 Domain of unknown function 631 679 1.4E-18 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Gene3D G3DSA:4.10.780.10 638 669 1.0E-13 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Gene3D G3DSA:3.40.50.920 262 417 5.7E-61 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 9 1171 0.0 T 20-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 SUPERFAMILY SSF52518 799 1170 4.36E-114 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 19 249 3.5E-76 T 20-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Gene3D G3DSA:3.40.920.10 418 621 2.4E-79 T 20-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 427 609 2.0E-26 T 20-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 SUPERFAMILY SSF54862 666 842 6.28E-19 T 20-04-2016 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 SUPERFAMILY SSF53323 418 669 7.85E-77 T 20-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Gene3D G3DSA:1.10.1060.10 685 762 3.3E-16 T 20-04-2016 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 SUPERFAMILY SSF52922 262 416 4.57E-46 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 PANTHER PTHR32154:SF0 7 1171 0.0 T 20-04-2016 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 SUPERFAMILY SSF52518 7 260 1.97E-72 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 965 1077 2.7E-7 T 20-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 PIRSF PIRSF000159 1 1175 0.0 T 20-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Gene3D G3DSA:3.40.50.970 802 1171 7.4E-130 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 PANTHER PTHR32154 7 1171 0.0 T 20-04-2016 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 749 760 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 691 702 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 271 361 7.9E-12 T 20-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 SMART SM00890 623 680 4.2E-21 T 20-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Gene3D G3DSA:3.40.50.970 9 260 1.1E-106 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS12455 2dce8969a01960e5c725954bb32ed79a 1176 Pfam PF13484 4Fe-4S double cluster binding domain 691 761 2.4E-10 T 20-04-2016 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PRINTS PR00986 Valyl-tRNA synthetase signature 488 506 6.2E-28 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PRINTS PR00986 Valyl-tRNA synthetase signature 345 358 6.2E-28 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PRINTS PR00986 Valyl-tRNA synthetase signature 455 476 6.2E-28 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PRINTS PR00986 Valyl-tRNA synthetase signature 230 247 6.2E-28 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PRINTS PR00986 Valyl-tRNA synthetase signature 36 47 6.2E-28 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 813 877 3.4E-14 T 20-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Pfam PF08264 Anticodon-binding domain of tRNA 618 754 1.1E-29 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PANTHER PTHR11946 1 791 0.0 T 20-04-2016 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PANTHER PTHR11946 809 870 0.0 T 20-04-2016 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PANTHER PTHR11946:SF5 1 791 0.0 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 PANTHER PTHR11946:SF5 809 870 0.0 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 SUPERFAMILY SSF47323 587 826 2.8E-39 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 SUPERFAMILY SSF52374 2 192 3.83E-121 T 20-04-2016 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 SUPERFAMILY SSF52374 340 582 3.83E-121 T 20-04-2016 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Gene3D G3DSA:3.40.50.620 30 162 2.9E-99 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Gene3D G3DSA:3.40.50.620 345 528 2.9E-99 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 SUPERFAMILY SSF46589 813 877 2.2E-13 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Gene3D G3DSA:1.10.730.10 529 751 1.8E-55 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 575 1.4E-179 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Gene3D G3DSA:1.10.287.380 807 877 8.5E-7 T 20-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Gene3D G3DSA:3.90.740.10 163 334 2.3E-53 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 860 2.0E-272 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 54 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 878 14.066 T 20-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APS56_RS14780 19d03bb35bd5ea5aaa159c8e931fcff4 878 SUPERFAMILY SSF50677 191 340 4.45E-54 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APS56_RS01665 ab461b5ce0a2f8f9086238e8c2f87846 301 SUPERFAMILY SSF56281 1 301 3.95E-72 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS01665 ab461b5ce0a2f8f9086238e8c2f87846 301 PANTHER PTHR12553 1 151 8.7E-68 T 20-04-2016 APS56_RS01665 ab461b5ce0a2f8f9086238e8c2f87846 301 PANTHER PTHR12553 181 301 8.7E-68 T 20-04-2016 APS56_RS01665 ab461b5ce0a2f8f9086238e8c2f87846 301 Gene3D G3DSA:3.60.15.10 3 300 2.1E-73 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS01665 ab461b5ce0a2f8f9086238e8c2f87846 301 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 299 6.3E-95 T 20-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 APS56_RS01665 ab461b5ce0a2f8f9086238e8c2f87846 301 Hamap MF_01818 Ribonuclease BN [rbn]. 1 301 31.332 T 20-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 APS56_RS01665 ab461b5ce0a2f8f9086238e8c2f87846 301 Pfam PF00753 Metallo-beta-lactamase superfamily 22 92 5.0E-10 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 SUPERFAMILY SSF51735 462 635 1.23E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 PANTHER PTHR21499:SF3 3 469 2.0E-139 T 20-04-2016 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 Gene3D G3DSA:3.40.1160.10 1 49 2.6E-55 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 Gene3D G3DSA:3.40.1160.10 108 297 2.6E-55 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 SUPERFAMILY SSF55347 613 796 1.24E-43 T 20-04-2016 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 659 681 - T 20-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 Pfam PF13840 ACT domain 390 455 1.0E-6 T 20-04-2016 IPR027795 GATS-like ACT domain APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 SUPERFAMILY SSF53633 1 295 1.2E-70 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 Pfam PF00696 Amino acid kinase family 2 282 1.1E-40 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 Gene3D G3DSA:3.30.360.10 635 791 6.3E-49 T 20-04-2016 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 471 595 1.3E-11 T 20-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 PIRSF PIRSF000727 1 814 3.3E-276 T 20-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 459 4.4E-121 T 20-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 SUPERFAMILY SSF55021 303 378 7.63E-21 T 20-04-2016 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 SUPERFAMILY SSF55021 381 461 1.17E-22 T 20-04-2016 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 20-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 PANTHER PTHR21499 3 469 2.0E-139 T 20-04-2016 APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 Gene3D G3DSA:3.40.50.720 462 634 1.6E-55 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS03575 80e6ac2077727a678be4bcbb8129797c 814 Pfam PF00742 Homoserine dehydrogenase 613 809 6.3E-50 T 20-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS16015 fd392cd27a45de0bcf39581e49eca65c 123 Pfam PF01527 Transposase 9 86 3.3E-10 T 20-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APS56_RS16015 fd392cd27a45de0bcf39581e49eca65c 123 SUPERFAMILY SSF46689 9 85 2.69E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS16015 fd392cd27a45de0bcf39581e49eca65c 123 Gene3D G3DSA:1.10.10.60 13 84 2.8E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS01250 fd392cd27a45de0bcf39581e49eca65c 123 Pfam PF01527 Transposase 9 86 3.3E-10 T 20-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APS56_RS01250 fd392cd27a45de0bcf39581e49eca65c 123 SUPERFAMILY SSF46689 9 85 2.69E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS01250 fd392cd27a45de0bcf39581e49eca65c 123 Gene3D G3DSA:1.10.10.60 13 84 2.8E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS14800 fd392cd27a45de0bcf39581e49eca65c 123 Pfam PF01527 Transposase 9 86 3.3E-10 T 20-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APS56_RS14800 fd392cd27a45de0bcf39581e49eca65c 123 SUPERFAMILY SSF46689 9 85 2.69E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS14800 fd392cd27a45de0bcf39581e49eca65c 123 Gene3D G3DSA:1.10.10.60 13 84 2.8E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS16005 fd392cd27a45de0bcf39581e49eca65c 123 Pfam PF01527 Transposase 9 86 3.3E-10 T 20-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APS56_RS16005 fd392cd27a45de0bcf39581e49eca65c 123 SUPERFAMILY SSF46689 9 85 2.69E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS16005 fd392cd27a45de0bcf39581e49eca65c 123 Gene3D G3DSA:1.10.10.60 13 84 2.8E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15995 fd392cd27a45de0bcf39581e49eca65c 123 Pfam PF01527 Transposase 9 86 3.3E-10 T 20-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APS56_RS15995 fd392cd27a45de0bcf39581e49eca65c 123 SUPERFAMILY SSF46689 9 85 2.69E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15995 fd392cd27a45de0bcf39581e49eca65c 123 Gene3D G3DSA:1.10.10.60 13 84 2.8E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06620 fd392cd27a45de0bcf39581e49eca65c 123 Pfam PF01527 Transposase 9 86 3.3E-10 T 20-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APS56_RS06620 fd392cd27a45de0bcf39581e49eca65c 123 SUPERFAMILY SSF46689 9 85 2.69E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06620 fd392cd27a45de0bcf39581e49eca65c 123 Gene3D G3DSA:1.10.10.60 13 84 2.8E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS01225 fd392cd27a45de0bcf39581e49eca65c 123 Pfam PF01527 Transposase 9 86 3.3E-10 T 20-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 APS56_RS01225 fd392cd27a45de0bcf39581e49eca65c 123 SUPERFAMILY SSF46689 9 85 2.69E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS01225 fd392cd27a45de0bcf39581e49eca65c 123 Gene3D G3DSA:1.10.10.60 13 84 2.8E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02425 030042b2f393237313bf91f5f53042ab 167 Pfam PF08534 Redoxin 21 162 7.9E-30 T 20-04-2016 IPR013740 Redoxin GO:0016491 APS56_RS02425 030042b2f393237313bf91f5f53042ab 167 Gene3D G3DSA:3.40.30.10 2 166 3.2E-48 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS02425 030042b2f393237313bf91f5f53042ab 167 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 20-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 APS56_RS02425 030042b2f393237313bf91f5f53042ab 167 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 166 35.625 T 20-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 APS56_RS02425 030042b2f393237313bf91f5f53042ab 167 SUPERFAMILY SSF52833 1 163 4.64E-45 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS02425 030042b2f393237313bf91f5f53042ab 167 PANTHER PTHR10681:SF81 3 165 8.7E-48 T 20-04-2016 APS56_RS02425 030042b2f393237313bf91f5f53042ab 167 PANTHER PTHR10681 3 165 8.7E-48 T 20-04-2016 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 PANTHER PTHR22749 13 300 1.3E-107 T 20-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 SUPERFAMILY SSF82114 172 306 2.62E-40 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 Gene3D G3DSA:2.40.30.30 178 306 1.5E-37 T 20-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 Pfam PF06574 FAD synthetase 12 164 1.3E-48 T 20-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 17 304 1.8E-81 T 20-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 SUPERFAMILY SSF52374 15 177 1.15E-35 T 20-04-2016 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 SMART SM00904 181 306 5.0E-53 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 Pfam PF01687 Riboflavin kinase 182 301 5.5E-33 T 20-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 PIRSF PIRSF004491 1 310 1.1E-105 T 20-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 PANTHER PTHR22749:SF0 13 300 1.3E-107 T 20-04-2016 APS56_RS09595 0c9717a26d54762d839493f5ce215751 310 Gene3D G3DSA:3.40.50.620 11 177 3.6E-60 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 Pfam PF00248 Aldo/keto reductase family 15 263 7.5E-52 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 PRINTS PR00069 Aldo-keto reductase signature 128 145 8.6E-49 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 PRINTS PR00069 Aldo-keto reductase signature 90 108 8.6E-49 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 PRINTS PR00069 Aldo-keto reductase signature 199 223 8.6E-49 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 PRINTS PR00069 Aldo-keto reductase signature 34 58 8.6E-49 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 PRINTS PR00069 Aldo-keto reductase signature 162 191 8.6E-49 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 Gene3D G3DSA:3.20.20.100 3 265 3.9E-100 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 PANTHER PTHR11732 1 265 2.4E-134 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 128 145 - T 20-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 PIRSF PIRSF000097 1 271 3.9E-88 T 20-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APS56_RS15910 aec7f7026a0e62694675e3b3d0059f5c 284 SUPERFAMILY SSF51430 4 263 2.75E-90 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS07815 0e5ba76a7880aa9ce67cd4429b059da0 547 SUPERFAMILY SSF63737 46 234 1.83E-18 T 20-04-2016 APS56_RS07815 0e5ba76a7880aa9ce67cd4429b059da0 547 Pfam PF01433 Peptidase family M1 50 382 2.6E-28 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APS56_RS07815 0e5ba76a7880aa9ce67cd4429b059da0 547 PANTHER PTHR11533 48 510 4.6E-38 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APS56_RS07815 0e5ba76a7880aa9ce67cd4429b059da0 547 Gene3D G3DSA:1.10.390.10 348 484 2.8E-16 T 20-04-2016 APS56_RS07815 0e5ba76a7880aa9ce67cd4429b059da0 547 SUPERFAMILY SSF55486 248 481 1.25E-40 T 20-04-2016 APS56_RS07815 0e5ba76a7880aa9ce67cd4429b059da0 547 PANTHER PTHR11533:SF185 48 510 4.6E-38 T 20-04-2016 APS56_RS06140 7d705965509e19954e45160ca5ed1315 291 Pfam PF08386 TAP-like protein 200 251 1.1E-4 T 20-04-2016 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal APS56_RS06140 7d705965509e19954e45160ca5ed1315 291 PANTHER PTHR23024:SF58 6 276 2.8E-60 T 20-04-2016 APS56_RS06140 7d705965509e19954e45160ca5ed1315 291 SUPERFAMILY SSF53474 17 262 5.03E-43 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06140 7d705965509e19954e45160ca5ed1315 291 Pfam PF07859 alpha/beta hydrolase fold 58 179 8.5E-14 T 20-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APS56_RS06140 7d705965509e19954e45160ca5ed1315 291 Gene3D G3DSA:3.40.50.1820 36 254 2.9E-52 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06140 7d705965509e19954e45160ca5ed1315 291 PANTHER PTHR23024 6 276 2.8E-60 T 20-04-2016 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 SUPERFAMILY SSF56712 1 578 9.29E-171 T 20-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 Gene3D G3DSA:2.70.20.10 211 316 1.4E-10 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PANTHER PTHR11390 708 734 1.6E-178 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PANTHER PTHR11390 493 680 1.6E-178 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PANTHER PTHR11390 1 476 1.6E-178 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 Pfam PF01131 DNA topoisomerase 150 565 2.1E-120 T 20-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 Gene3D G3DSA:1.10.460.10 153 210 9.3E-57 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 Gene3D G3DSA:1.10.460.10 463 579 9.3E-57 T 20-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 SMART SM00436 124 217 1.3E-39 T 20-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 SMART SM00493 1 124 1.1E-12 T 20-04-2016 IPR006171 Toprim domain APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 Pfam PF01751 Toprim domain 3 132 5.4E-13 T 20-04-2016 IPR006171 Toprim domain APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 674 7.6E-174 T 20-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 493 507 5.1E-25 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 377 393 5.1E-25 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 5.1E-25 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 5.1E-25 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 187 205 5.1E-25 T 20-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PANTHER PTHR11390:SF21 708 734 1.6E-178 T 20-04-2016 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PANTHER PTHR11390:SF21 493 680 1.6E-178 T 20-04-2016 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 PANTHER PTHR11390:SF21 1 476 1.6E-178 T 20-04-2016 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 Gene3D G3DSA:2.70.20.10 346 461 3.3E-30 T 20-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 Gene3D G3DSA:3.40.50.140 1 150 2.1E-46 T 20-04-2016 IPR006171 Toprim domain APS56_RS07575 bbc027b9c913fb9226c8395fd1832e2c 762 SMART SM00437 258 530 5.6E-70 T 20-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APS56_RS04295 3ea76314007019af34515b9d111c913c 459 PANTHER PTHR12053 22 459 8.1E-119 T 20-04-2016 APS56_RS04295 3ea76314007019af34515b9d111c913c 459 Pfam PF04389 Peptidase family M28 259 404 4.3E-19 T 20-04-2016 IPR007484 Peptidase M28 APS56_RS04295 3ea76314007019af34515b9d111c913c 459 Gene3D G3DSA:3.40.630.10 258 450 7.3E-53 T 20-04-2016 APS56_RS04295 3ea76314007019af34515b9d111c913c 459 Gene3D G3DSA:3.40.630.10 31 90 7.3E-53 T 20-04-2016 APS56_RS04295 3ea76314007019af34515b9d111c913c 459 PANTHER PTHR12053:SF3 22 459 8.1E-119 T 20-04-2016 APS56_RS04295 3ea76314007019af34515b9d111c913c 459 Gene3D G3DSA:3.50.30.30 108 243 1.9E-4 T 20-04-2016 APS56_RS04295 3ea76314007019af34515b9d111c913c 459 SUPERFAMILY SSF53187 215 451 1.18E-48 T 20-04-2016 APS56_RS08700 c52eafb53e78770c13353cce811fd0d9 96 Pfam PF12728 Helix-turn-helix domain 44 92 4.1E-9 T 20-04-2016 APS56_RS08700 c52eafb53e78770c13353cce811fd0d9 96 SUPERFAMILY SSF46955 44 90 3.3E-7 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS12760 7ff3e827da1337d79ca6163153786bc3 165 PANTHER PTHR39165:SF1 1 161 6.2E-38 T 20-04-2016 APS56_RS12760 7ff3e827da1337d79ca6163153786bc3 165 PANTHER PTHR39165 1 161 6.2E-38 T 20-04-2016 APS56_RS12760 7ff3e827da1337d79ca6163153786bc3 165 Pfam PF04306 Protein of unknown function (DUF456) 21 154 9.4E-39 T 20-04-2016 IPR007403 Protein of unknown function DUF456 APS56_RS12545 472809e78505ac0c13ed9193c66b8d97 173 PANTHER PTHR12919 2 165 2.8E-38 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS12545 472809e78505ac0c13ed9193c66b8d97 173 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 78 9.9E-29 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS12545 472809e78505ac0c13ed9193c66b8d97 173 SUPERFAMILY SSF54565 3 100 1.7E-32 T 20-04-2016 IPR023803 Ribosomal protein S16 domain APS56_RS12545 472809e78505ac0c13ed9193c66b8d97 173 Gene3D G3DSA:3.30.1320.10 3 83 1.1E-29 T 20-04-2016 IPR023803 Ribosomal protein S16 domain APS56_RS12545 472809e78505ac0c13ed9193c66b8d97 173 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 22.411 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS12545 472809e78505ac0c13ed9193c66b8d97 173 Pfam PF00886 Ribosomal protein S16 9 67 3.8E-22 T 20-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS10925 875c64ef5e73cadcd7c757fc79283a76 350 Pfam PF13306 Leucine rich repeats (6 copies) 62 165 9.3E-25 T 20-04-2016 IPR026906 Leucine rich repeat 5 APS56_RS10925 875c64ef5e73cadcd7c757fc79283a76 350 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 289 349 7.1E-6 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS10925 875c64ef5e73cadcd7c757fc79283a76 350 PANTHER PTHR11017 318 340 4.6E-34 T 20-04-2016 APS56_RS10925 875c64ef5e73cadcd7c757fc79283a76 350 PANTHER PTHR11017 51 212 4.6E-34 T 20-04-2016 APS56_RS10925 875c64ef5e73cadcd7c757fc79283a76 350 SUPERFAMILY SSF52058 87 213 2.79E-5 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS14185 56dd3b9d0e681cd61fff37e2ec7c950c 323 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 258 314 1.9E-15 T 20-04-2016 IPR019264 Domain of unknown function DUF2179 APS56_RS14185 56dd3b9d0e681cd61fff37e2ec7c950c 323 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 48 249 3.9E-55 T 20-04-2016 IPR003740 Uncharacterised membrane protein YitT APS56_RS14185 56dd3b9d0e681cd61fff37e2ec7c950c 323 PANTHER PTHR33545 31 323 7.9E-69 T 20-04-2016 APS56_RS14185 56dd3b9d0e681cd61fff37e2ec7c950c 323 PIRSF PIRSF006483 29 322 3.8E-80 T 20-04-2016 IPR003740 Uncharacterised membrane protein YitT APS56_RS14185 56dd3b9d0e681cd61fff37e2ec7c950c 323 PANTHER PTHR33545:SF3 31 323 7.9E-69 T 20-04-2016 APS56_RS08270 364091257518a39bb0796b189712178a 321 Gene3D G3DSA:1.25.40.10 16 135 4.4E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 Gene3D G3DSA:1.25.40.10 234 318 8.6E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 Gene3D G3DSA:1.25.40.10 136 233 1.1E-23 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 Pfam PF13432 Tetratricopeptide repeat 121 183 5.2E-4 T 20-04-2016 APS56_RS08270 364091257518a39bb0796b189712178a 321 SUPERFAMILY SSF48452 32 278 1.34E-30 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 SMART SM00028 50 83 4.5 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 SMART SM00028 151 184 0.002 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 SMART SM00028 117 150 0.11 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 SMART SM00028 218 251 0.14 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 SMART SM00028 84 116 0.0016 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 SMART SM00028 185 217 14.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 SMART SM00028 252 285 24.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 Pfam PF00515 Tetratricopeptide repeat 83 115 2.7E-8 T 20-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 PANTHER PTHR23083 31 281 1.1E-46 T 20-04-2016 APS56_RS08270 364091257518a39bb0796b189712178a 321 Pfam PF13181 Tetratricopeptide repeat 220 248 0.03 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08270 364091257518a39bb0796b189712178a 321 Pfam PF13181 Tetratricopeptide repeat 185 217 0.002 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11045 ee7c05360e671f32f95bfebe7a8b254e 359 SUPERFAMILY SSF75005 102 340 7.01E-16 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS11045 ee7c05360e671f32f95bfebe7a8b254e 359 SUPERFAMILY SSF75005 160 207 1.83E-18 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS11045 ee7c05360e671f32f95bfebe7a8b254e 359 SUPERFAMILY SSF75005 37 130 1.83E-18 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS11045 ee7c05360e671f32f95bfebe7a8b254e 359 Gene3D G3DSA:2.115.10.20 39 105 8.3E-4 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS11045 ee7c05360e671f32f95bfebe7a8b254e 359 Gene3D G3DSA:2.115.10.20 112 210 4.8E-7 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS01190 2b9e4e1db041853ecc8a4d5e31407fad 322 Pfam PF01548 Transposase 9 145 3.7E-21 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APS56_RS01190 2b9e4e1db041853ecc8a4d5e31407fad 322 PANTHER PTHR33055:SF3 4 315 3.5E-59 T 20-04-2016 APS56_RS01190 2b9e4e1db041853ecc8a4d5e31407fad 322 PANTHER PTHR33055 4 315 3.5E-59 T 20-04-2016 APS56_RS01190 2b9e4e1db041853ecc8a4d5e31407fad 322 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 278 8.1E-23 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APS56_RS16060 2b9e4e1db041853ecc8a4d5e31407fad 322 Pfam PF01548 Transposase 9 145 3.7E-21 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APS56_RS16060 2b9e4e1db041853ecc8a4d5e31407fad 322 PANTHER PTHR33055:SF3 4 315 3.5E-59 T 20-04-2016 APS56_RS16060 2b9e4e1db041853ecc8a4d5e31407fad 322 PANTHER PTHR33055 4 315 3.5E-59 T 20-04-2016 APS56_RS16060 2b9e4e1db041853ecc8a4d5e31407fad 322 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 278 8.1E-23 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APS56_RS16045 2b9e4e1db041853ecc8a4d5e31407fad 322 Pfam PF01548 Transposase 9 145 3.7E-21 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APS56_RS16045 2b9e4e1db041853ecc8a4d5e31407fad 322 PANTHER PTHR33055:SF3 4 315 3.5E-59 T 20-04-2016 APS56_RS16045 2b9e4e1db041853ecc8a4d5e31407fad 322 PANTHER PTHR33055 4 315 3.5E-59 T 20-04-2016 APS56_RS16045 2b9e4e1db041853ecc8a4d5e31407fad 322 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 278 8.1E-23 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APS56_RS15960 2b9e4e1db041853ecc8a4d5e31407fad 322 Pfam PF01548 Transposase 9 145 3.7E-21 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APS56_RS15960 2b9e4e1db041853ecc8a4d5e31407fad 322 PANTHER PTHR33055:SF3 4 315 3.5E-59 T 20-04-2016 APS56_RS15960 2b9e4e1db041853ecc8a4d5e31407fad 322 PANTHER PTHR33055 4 315 3.5E-59 T 20-04-2016 APS56_RS15960 2b9e4e1db041853ecc8a4d5e31407fad 322 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 278 8.1E-23 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APS56_RS00735 50a9cba54cbba18652717fbf216da987 299 PANTHER PTHR12715:SF5 10 293 3.0E-72 T 20-04-2016 APS56_RS00735 50a9cba54cbba18652717fbf216da987 299 SUPERFAMILY SSF103481 215 296 7.32E-10 T 20-04-2016 APS56_RS00735 50a9cba54cbba18652717fbf216da987 299 Pfam PF00892 EamA-like transporter family 9 146 5.3E-13 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS00735 50a9cba54cbba18652717fbf216da987 299 Pfam PF00892 EamA-like transporter family 160 294 3.3E-16 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS00735 50a9cba54cbba18652717fbf216da987 299 SUPERFAMILY SSF103481 44 149 3.66E-12 T 20-04-2016 APS56_RS00735 50a9cba54cbba18652717fbf216da987 299 PANTHER PTHR12715 10 293 3.0E-72 T 20-04-2016 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 SUPERFAMILY SSF52313 5 230 9.03E-84 T 20-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 Gene3D G3DSA:3.40.50.10490 22 98 1.9E-60 T 20-04-2016 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 Gene3D G3DSA:3.40.50.10490 157 244 1.9E-60 T 20-04-2016 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 157 181 - T 20-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 Gene3D G3DSA:1.10.287.610 99 150 5.0E-21 T 20-04-2016 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 Pfam PF00318 Ribosomal protein S2 8 222 8.3E-86 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 5 16 - T 20-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 PANTHER PTHR12534 1 257 1.1E-96 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 PRINTS PR00395 Ribosomal protein S2 signature 157 174 3.2E-36 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 PRINTS PR00395 Ribosomal protein S2 signature 195 209 3.2E-36 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 PRINTS PR00395 Ribosomal protein S2 signature 86 103 3.2E-36 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 PRINTS PR00395 Ribosomal protein S2 signature 36 45 3.2E-36 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 PRINTS PR00395 Ribosomal protein S2 signature 5 23 3.2E-36 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 PRINTS PR00395 Ribosomal protein S2 signature 174 185 3.2E-36 T 20-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 1 224 37.41 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APS56_RS08180 321aaf7122835ae56be22f7de9eaa263 257 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 223 1.5E-88 T 20-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 6.8E-34 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 20-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 PANTHER PTHR11910 9 175 2.2E-41 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 Gene3D G3DSA:1.10.520.20 7 105 5.0E-20 T 20-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 SUPERFAMILY SSF47928 6 106 2.35E-20 T 20-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 177 17.83 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.5E-19 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 PRINTS PR00125 ATP synthase delta subunit signature 6 25 1.5E-19 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 1.5E-19 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 1.5E-19 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.5E-19 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS10665 22ac591a51d479e3cf811d3c62318d4e 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 6.4E-43 T 20-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 Gene3D G3DSA:3.40.605.10 554 749 7.3E-40 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 Pfam PF01619 Proline dehydrogenase 130 426 6.2E-57 T 20-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 Pfam PF00171 Aldehyde dehydrogenase family 554 958 5.9E-92 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 Gene3D G3DSA:3.40.309.10 750 937 3.0E-36 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 SUPERFAMILY SSF53720 521 958 7.72E-92 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 PANTHER PTHR11699 554 958 1.8E-104 T 20-04-2016 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 762 773 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 PIRSF PIRSF000197 1 1123 4.7E-261 T 20-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 PANTHER PTHR11699:SF15 554 958 1.8E-104 T 20-04-2016 APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 SUPERFAMILY SSF51730 128 453 1.33E-62 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 Gene3D G3DSA:3.20.20.220 128 454 1.8E-59 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like APS56_RS02310 a916b444039bad8d1f60c7f4ec5564f2 1125 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 734 741 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 Pfam PF00210 Ferritin-like domain 17 156 4.9E-23 T 20-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 PANTHER PTHR30295 1 156 5.2E-40 T 20-04-2016 APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 SUPERFAMILY SSF47240 4 156 2.62E-35 T 20-04-2016 IPR009078 Ferritin-like superfamily APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 PANTHER PTHR30295:SF6 1 156 5.2E-40 T 20-04-2016 APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 PIRSF PIRSF005900 1 157 9.7E-44 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 Gene3D G3DSA:1.20.1260.10 1 156 3.1E-48 T 20-04-2016 IPR012347 Ferritin-related APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 38 54 6.3E-10 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 134 152 6.3E-10 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 62 78 6.3E-10 T 20-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APS56_RS08290 79c6848ca2ee537b3fb1b61bd0033729 157 ProSitePatterns PS00818 Dps protein family signature 1. 38 54 - T 20-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PIRSF PIRSF000350 1 464 1.8E-95 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 461 1.3E-175 T 20-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 3.8E-40 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 3.8E-40 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 3.8E-40 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.8E-40 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 3.8E-40 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PANTHER PTHR22912 1 458 8.4E-229 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 327 3.8E-72 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 20-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 Gene3D G3DSA:3.30.390.30 334 460 7.1E-47 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 2.7E-76 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 SUPERFAMILY SSF55424 342 460 1.7E-40 T 20-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 Gene3D G3DSA:3.50.50.60 2 139 6.9E-45 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 PANTHER PTHR22912:SF151 1 458 8.4E-229 T 20-04-2016 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 455 4.5E-37 T 20-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 SUPERFAMILY SSF51905 1 321 9.15E-66 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00815 000f267f9696f870674d4138d18cc104 466 Gene3D G3DSA:3.50.50.60 140 333 8.2E-56 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 Gene3D G3DSA:3.30.1120.10 430 485 9.5E-17 T 20-04-2016 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 Pfam PF00884 Sulfatase 9 364 1.8E-52 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 PANTHER PTHR10342 7 236 5.8E-102 T 20-04-2016 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 PANTHER PTHR10342 427 484 5.8E-102 T 20-04-2016 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 PANTHER PTHR10342:SF237 7 236 5.8E-102 T 20-04-2016 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 PANTHER PTHR10342:SF237 254 401 5.8E-102 T 20-04-2016 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 PANTHER PTHR10342:SF237 427 484 5.8E-102 T 20-04-2016 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 SUPERFAMILY SSF53649 8 484 5.63E-100 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 PANTHER PTHR10342 254 401 5.8E-102 T 20-04-2016 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 Pfam PF16347 Domain of unknown function (DUF4976) 425 484 1.2E-11 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 Gene3D G3DSA:3.40.720.10 7 224 2.9E-82 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06010 b7a6cc657c10f8dd6108447892c6411c 490 Gene3D G3DSA:3.40.720.10 264 429 2.9E-82 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS00170 657e711e7787400ad3444bc221eada12 221 PANTHER PTHR11264 5 221 4.2E-119 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APS56_RS00170 657e711e7787400ad3444bc221eada12 221 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 36.437 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APS56_RS00170 657e711e7787400ad3444bc221eada12 221 SMART SM00986 50 211 5.1E-35 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APS56_RS00170 657e711e7787400ad3444bc221eada12 221 SUPERFAMILY SSF52141 2 221 5.01E-88 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APS56_RS00170 657e711e7787400ad3444bc221eada12 221 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 20-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 APS56_RS00170 657e711e7787400ad3444bc221eada12 221 Pfam PF03167 Uracil DNA glycosylase superfamily 55 210 6.0E-22 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APS56_RS00170 657e711e7787400ad3444bc221eada12 221 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 213 6.4E-79 T 20-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APS56_RS00170 657e711e7787400ad3444bc221eada12 221 SMART SM00987 50 211 5.1E-35 T 20-04-2016 APS56_RS00170 657e711e7787400ad3444bc221eada12 221 Gene3D G3DSA:3.40.470.10 3 221 9.3E-91 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APS56_RS02795 411c48bef28c277f144b3b935b207874 361 Pfam PF13784 Fic/DOC family N-terminal 29 108 1.5E-24 T 20-04-2016 IPR025758 Fic/DOC N-terminal APS56_RS02795 411c48bef28c277f144b3b935b207874 361 PANTHER PTHR13504:SF35 1 358 4.4E-99 T 20-04-2016 APS56_RS02795 411c48bef28c277f144b3b935b207874 361 PIRSF PIRSF038925 2 361 9.4E-106 T 20-04-2016 IPR026287 Adenosine monophosphate-protein transferase APS56_RS02795 411c48bef28c277f144b3b935b207874 361 Pfam PF02661 Fic/DOC family 131 214 5.5E-18 T 20-04-2016 IPR003812 Fido domain APS56_RS02795 411c48bef28c277f144b3b935b207874 361 Gene3D G3DSA:1.10.3290.10 33 282 3.3E-50 T 20-04-2016 IPR003812 Fido domain APS56_RS02795 411c48bef28c277f144b3b935b207874 361 PANTHER PTHR13504 1 358 4.4E-99 T 20-04-2016 APS56_RS02795 411c48bef28c277f144b3b935b207874 361 SUPERFAMILY SSF140931 95 281 1.44E-31 T 20-04-2016 IPR003812 Fido domain APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 SMART SM00825 Beta-ketoacyl synthase 6 415 3.7E-18 T 20-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 PIRSF PIRSF000447 1 416 4.1E-173 T 20-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 20-04-2016 IPR018201 Beta-ketoacyl synthase, active site APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 SUPERFAMILY SSF53901 216 415 9.05E-73 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 256 370 6.4E-41 T 20-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 248 1.2E-58 T 20-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 Gene3D G3DSA:3.40.47.10 265 415 1.8E-61 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 Gene3D G3DSA:3.40.47.10 4 259 1.2E-71 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 PANTHER PTHR11712 4 414 3.6E-197 T 20-04-2016 APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 SUPERFAMILY SSF53901 4 253 8.57E-76 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS11420 4768ae4100763b80b81493ec10b9d8ff 416 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 413 4.7E-181 T 20-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APS56_RS09345 0cdeb0bd8f625e8f7a92b51137ac059c 93 Gene3D G3DSA:2.60.120.10 1 93 1.6E-35 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS09345 0cdeb0bd8f625e8f7a92b51137ac059c 93 SUPERFAMILY SSF51182 1 92 5.35E-32 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS09345 0cdeb0bd8f625e8f7a92b51137ac059c 93 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 93 23.514 T 20-04-2016 IPR009664 Protein of unknown function DUF1255 APS56_RS09345 0cdeb0bd8f625e8f7a92b51137ac059c 93 Pfam PF06865 Protein of unknown function (DUF1255) 3 92 1.1E-33 T 20-04-2016 IPR009664 Protein of unknown function DUF1255 APS56_RS09345 0cdeb0bd8f625e8f7a92b51137ac059c 93 PANTHER PTHR36540 1 93 6.1E-37 T 20-04-2016 APS56_RS09345 0cdeb0bd8f625e8f7a92b51137ac059c 93 PANTHER PTHR36540:SF1 1 93 6.1E-37 T 20-04-2016 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 SUPERFAMILY SSF47323 393 605 1.31E-40 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Pfam PF09334 tRNA synthetases class I (M) 8 400 9.5E-159 T 20-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 PANTHER PTHR11946:SF72 1 648 0.0 T 20-04-2016 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 PANTHER PTHR11946 1 648 0.0 T 20-04-2016 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 566 684 7.8E-37 T 20-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Gene3D G3DSA:2.40.50.140 583 683 3.4E-36 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 524 2.5E-167 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Pfam PF01588 Putative tRNA binding domain 598 683 2.8E-23 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 SUPERFAMILY SSF57770 142 176 1.18E-11 T 20-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Gene3D G3DSA:3.40.50.620 5 144 6.9E-87 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Gene3D G3DSA:3.40.50.620 183 383 6.9E-87 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 566 40.824 T 20-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Pfam PF08264 Anticodon-binding domain of tRNA 434 537 4.0E-8 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 SUPERFAMILY SSF52374 176 388 2.58E-93 T 20-04-2016 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 SUPERFAMILY SSF52374 4 141 2.58E-93 T 20-04-2016 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Gene3D G3DSA:2.20.28.20 145 176 6.1E-19 T 20-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 4.5E-27 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 4.5E-27 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 4.5E-27 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 388 399 4.5E-27 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 293 308 4.5E-27 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 PRINTS PR01041 Methionyl-tRNA synthetase signature 255 266 4.5E-27 T 20-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 Gene3D G3DSA:1.10.730.10 384 555 2.9E-45 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS10295 50daace4e12c2fd93d0d4a3eb6f88172 702 SUPERFAMILY SSF50249 586 682 1.59E-28 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS05510 77eaab9868fb370cb5501e66c742dc78 178 Pfam PF00293 NUDIX domain 30 159 1.5E-20 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APS56_RS05510 77eaab9868fb370cb5501e66c742dc78 178 SUPERFAMILY SSF55811 4 170 2.57E-47 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS05510 77eaab9868fb370cb5501e66c742dc78 178 PIRSF PIRSF018427 1 177 2.0E-55 T 20-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APS56_RS05510 77eaab9868fb370cb5501e66c742dc78 178 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 162 2.8E-40 T 20-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APS56_RS05510 77eaab9868fb370cb5501e66c742dc78 178 Gene3D G3DSA:3.90.79.10 1 172 1.3E-54 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS05510 77eaab9868fb370cb5501e66c742dc78 178 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 174 33.162 T 20-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APS56_RS05510 77eaab9868fb370cb5501e66c742dc78 178 PANTHER PTHR10885 1 166 5.3E-59 T 20-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APS56_RS09045 b5b1af59ff2fe3f189422ea69fc536a8 289 Gene3D G3DSA:3.10.129.10 3 114 6.1E-40 T 20-04-2016 IPR029069 HotDog domain APS56_RS09045 b5b1af59ff2fe3f189422ea69fc536a8 289 PANTHER PTHR11066 3 289 1.0E-98 T 20-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 APS56_RS09045 b5b1af59ff2fe3f189422ea69fc536a8 289 SUPERFAMILY SSF54637 116 285 4.35E-44 T 20-04-2016 IPR029069 HotDog domain APS56_RS09045 b5b1af59ff2fe3f189422ea69fc536a8 289 PANTHER PTHR11066:SF34 3 289 1.0E-98 T 20-04-2016 APS56_RS09045 b5b1af59ff2fe3f189422ea69fc536a8 289 Pfam PF13622 Thioesterase-like superfamily 30 283 1.2E-50 T 20-04-2016 APS56_RS09045 b5b1af59ff2fe3f189422ea69fc536a8 289 Gene3D G3DSA:3.10.129.10 126 286 6.5E-46 T 20-04-2016 IPR029069 HotDog domain APS56_RS09045 b5b1af59ff2fe3f189422ea69fc536a8 289 SUPERFAMILY SSF54637 2 113 1.09E-34 T 20-04-2016 IPR029069 HotDog domain APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 Pfam PF00754 F5/8 type C domain 682 791 4.0E-9 T 20-04-2016 IPR000421 Coagulation factor 5/8 C-terminal domain APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 SUPERFAMILY SSF49785 669 809 9.36E-25 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 SUPERFAMILY SSF51445 60 347 2.4E-13 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 SMART SM00606 451 580 4.1E-43 T 20-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 Gene3D G3DSA:2.60.120.260 454 579 7.7E-40 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 SUPERFAMILY SSF49785 453 579 5.78E-31 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1091 1166 6.2E-15 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 Gene3D G3DSA:2.60.120.260 668 812 1.6E-30 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 Pfam PF03422 Carbohydrate binding module (family 6) 459 579 6.7E-34 T 20-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 Gene3D G3DSA:2.60.40.10 823 900 2.6E-11 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 Gene3D G3DSA:2.60.40.10 586 667 9.3E-16 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 Gene3D G3DSA:2.60.40.1180 337 440 8.7E-8 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 SMART SM00607 671 814 2.1E-4 T 20-04-2016 IPR006585 Fucolectin tachylectin-4 pentraxin-1 APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 SUPERFAMILY SSF49265 820 904 8.92E-11 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 PANTHER PTHR19277 1090 1100 2.9E-15 T 20-04-2016 APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 PANTHER PTHR19277 661 823 2.9E-15 T 20-04-2016 APS56_RS06055 83ddb57b9eba5a0535cebea9593a79ab 1167 PANTHER PTHR19277 12 25 2.9E-15 T 20-04-2016 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 Pfam PF13181 Tetratricopeptide repeat 116 143 0.1 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 Gene3D G3DSA:1.25.40.10 76 295 2.8E-16 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 Pfam PF12862 Anaphase-promoting complex subunit 5 225 300 0.025 T 20-04-2016 IPR026000 Anaphase-promoting complex subunit 5 UniPathway: UPA00143 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 Pfam PF12770 CHAT domain 567 819 1.2E-39 T 20-04-2016 IPR024983 CHAT domain APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 SMART SM00028 150 183 81.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 SMART SM00028 110 143 240.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 SMART SM00028 65 98 85.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 SMART SM00028 260 293 24.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 SMART SM00028 219 252 200.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 SUPERFAMILY SSF48452 217 289 1.24E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09120 80fc667b1947bc39d452cd3a38a5dbc8 863 SUPERFAMILY SSF48452 82 187 1.24E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08850 c69303277a285f8e48b3012ecc31f154 372 PANTHER PTHR33886 5 370 2.1E-90 T 20-04-2016 APS56_RS08850 c69303277a285f8e48b3012ecc31f154 372 Gene3D G3DSA:1.50.10.10 22 370 1.0E-86 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS08850 c69303277a285f8e48b3012ecc31f154 372 PANTHER PTHR33886:SF2 5 370 2.1E-90 T 20-04-2016 APS56_RS08850 c69303277a285f8e48b3012ecc31f154 372 SUPERFAMILY SSF48208 46 369 9.07E-45 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS08850 c69303277a285f8e48b3012ecc31f154 372 Pfam PF07470 Glycosyl Hydrolase Family 88 34 367 3.2E-85 T 20-04-2016 IPR010905 Glycosyl hydrolase, family 88 APS56_RS05365 8b2af1a0c623ea65ff3f3544492cd98a 272 Gene3D G3DSA:3.90.550.10 1 212 2.5E-38 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05365 8b2af1a0c623ea65ff3f3544492cd98a 272 Pfam PF00535 Glycosyl transferase family 2 1 117 2.5E-20 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS05365 8b2af1a0c623ea65ff3f3544492cd98a 272 PANTHER PTHR22916 2 205 3.1E-45 T 20-04-2016 APS56_RS05365 8b2af1a0c623ea65ff3f3544492cd98a 272 PANTHER PTHR22916:SF2 2 205 3.1E-45 T 20-04-2016 APS56_RS05365 8b2af1a0c623ea65ff3f3544492cd98a 272 SUPERFAMILY SSF53448 1 212 5.16E-39 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 400 431 - T 20-04-2016 IPR030390 RNA methyltransferase TrmA, active site APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 PANTHER PTHR11061 2 471 1.5E-147 T 20-04-2016 APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 290 469 2.3E-18 T 20-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 PANTHER PTHR11061:SF30 2 471 1.5E-147 T 20-04-2016 APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 SUPERFAMILY SSF50249 11 60 9.14E-7 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 Pfam PF01938 TRAM domain 17 61 1.2E-5 T 20-04-2016 IPR002792 TRAM domain APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 Gene3D G3DSA:2.40.50.140 6 82 3.0E-18 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 21 461 2.0E-100 T 20-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 Gene3D G3DSA:3.40.50.150 263 467 1.8E-60 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 SUPERFAMILY SSF53335 71 468 5.29E-71 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00320 e95a25e627a395b5d2dd0412a8e47c30 471 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 451 461 - T 20-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APS56_RS02390 af7b59317ecdde4f9dc661b5c3a6557a 272 PIRSF PIRSF000388 1 272 3.1E-110 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APS56_RS02390 af7b59317ecdde4f9dc661b5c3a6557a 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 13 272 2.6E-98 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APS56_RS02390 af7b59317ecdde4f9dc661b5c3a6557a 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 10 267 2.1E-113 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APS56_RS02390 af7b59317ecdde4f9dc661b5c3a6557a 272 SUPERFAMILY SSF51621 10 272 1.77E-103 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APS56_RS02390 af7b59317ecdde4f9dc661b5c3a6557a 272 PANTHER PTHR20881 8 272 2.3E-143 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APS56_RS02390 af7b59317ecdde4f9dc661b5c3a6557a 272 Gene3D G3DSA:3.20.20.60 9 272 2.2E-116 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APS56_RS02390 af7b59317ecdde4f9dc661b5c3a6557a 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 11 272 42.01 T 20-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APS56_RS11170 38ed93fce8f43a832fc65f810bb815fd 350 PANTHER PTHR30004 3 339 1.7E-123 T 20-04-2016 APS56_RS11170 38ed93fce8f43a832fc65f810bb815fd 350 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 5 327 27.128 T 20-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APS56_RS11170 38ed93fce8f43a832fc65f810bb815fd 350 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 36 322 5.4E-98 T 20-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APS56_RS11170 38ed93fce8f43a832fc65f810bb815fd 350 SUPERFAMILY SSF53659 8 330 5.31E-86 T 20-04-2016 APS56_RS11170 38ed93fce8f43a832fc65f810bb815fd 350 Gene3D G3DSA:3.40.718.10 3 330 8.6E-109 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS11170 38ed93fce8f43a832fc65f810bb815fd 350 PANTHER PTHR30004:SF6 3 339 1.7E-123 T 20-04-2016 APS56_RS11170 38ed93fce8f43a832fc65f810bb815fd 350 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 9 326 3.0E-101 T 20-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 Pfam PF07661 MORN repeat variant 206 223 0.23 T 20-04-2016 IPR011652 MORN variant APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 Pfam PF07661 MORN repeat variant 133 154 1.9E-5 T 20-04-2016 IPR011652 MORN variant APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 Pfam PF07661 MORN repeat variant 181 201 0.042 T 20-04-2016 IPR011652 MORN variant APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 PANTHER PTHR33706:SF1 106 223 1.6E-17 T 20-04-2016 APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 PANTHER PTHR33706 106 223 1.6E-17 T 20-04-2016 APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 Gene3D G3DSA:2.20.110.10 164 220 3.9E-6 T 20-04-2016 APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 Gene3D G3DSA:2.20.110.10 27 159 2.6E-10 T 20-04-2016 APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 SUPERFAMILY SSF82185 27 145 1.96E-10 T 20-04-2016 APS56_RS04390 eb4e78aba68f6d7aad4189df6b795ad9 231 SUPERFAMILY SSF82185 109 217 1.57E-18 T 20-04-2016 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Pfam PF03924 CHASE domain 110 190 5.4E-6 T 20-04-2016 IPR006189 CHASE domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 727 835 5.7E-26 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Gene3D G3DSA:3.30.565.10 667 835 2.2E-41 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SUPERFAMILY SSF47384 599 681 2.35E-20 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 436 560 6.1E-19 T 20-04-2016 IPR000014 PAS domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SUPERFAMILY SSF55785 321 429 6.28E-12 T 20-04-2016 IPR000014 PAS domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 PANTHER PTHR24423 304 570 3.7E-116 T 20-04-2016 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 PANTHER PTHR24423 610 835 3.7E-116 T 20-04-2016 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SMART SM00086 385 427 2.1 T 20-04-2016 IPR001610 PAC motif APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SMART SM00086 511 553 0.0014 T 20-04-2016 IPR001610 PAC motif APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Gene3D G3DSA:1.10.287.130 607 666 8.9E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SMART SM00388 612 680 1.2E-22 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Pfam PF08447 PAS fold 463 547 4.1E-14 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Pfam PF08447 PAS fold 334 420 9.8E-11 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SMART SM00091 439 505 5.2E-5 T 20-04-2016 IPR000014 PAS domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SMART SM00091 311 379 130.0 T 20-04-2016 IPR000014 PAS domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 834 2.8E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 PRINTS PR00344 Bacterial sensor protein C-terminal signature 797 815 2.8E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 PRINTS PR00344 Bacterial sensor protein C-terminal signature 780 790 2.8E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 PRINTS PR00344 Bacterial sensor protein C-terminal signature 762 776 2.8E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SMART SM01079 49 219 2.8E-5 T 20-04-2016 IPR006189 CHASE domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Pfam PF00512 His Kinase A (phospho-acceptor) domain 612 680 2.5E-17 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SUPERFAMILY SSF55874 669 835 1.1E-43 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SUPERFAMILY SSF55785 424 551 2.44E-23 T 20-04-2016 IPR000014 PAS domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Gene3D G3DSA:3.30.450.20 435 551 1.8E-27 T 20-04-2016 APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 SMART SM00387 726 835 1.5E-32 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01035 d55a6463f8e53a7dcb60bba7bedb1bde 835 Gene3D G3DSA:3.30.450.20 302 434 2.4E-18 T 20-04-2016 APS56_RS12590 657a2da9913349b53457a2530a531712 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS12590 657a2da9913349b53457a2530a531712 247 SUPERFAMILY SSF52540 5 233 3.0E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12590 657a2da9913349b53457a2530a531712 247 Pfam PF00005 ABC transporter 25 174 8.5E-33 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS12590 657a2da9913349b53457a2530a531712 247 PANTHER PTHR24220:SF578 7 232 4.2E-123 T 20-04-2016 APS56_RS12590 657a2da9913349b53457a2530a531712 247 Gene3D G3DSA:3.40.50.300 4 226 1.3E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12590 657a2da9913349b53457a2530a531712 247 PANTHER PTHR24220 7 232 4.2E-123 T 20-04-2016 APS56_RS12590 657a2da9913349b53457a2530a531712 247 SMART SM00382 34 222 8.5E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS05165 52947319c240aedc22cc839e8ebdfa63 184 Gene3D G3DSA:3.40.30.10 12 174 5.9E-29 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05165 52947319c240aedc22cc839e8ebdfa63 184 Pfam PF00578 AhpC/TSA family 13 136 4.8E-18 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS05165 52947319c240aedc22cc839e8ebdfa63 184 SUPERFAMILY SSF52833 6 184 4.66E-49 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05165 52947319c240aedc22cc839e8ebdfa63 184 PANTHER PTHR10681:SF91 2 184 6.7E-65 T 20-04-2016 APS56_RS05165 52947319c240aedc22cc839e8ebdfa63 184 PANTHER PTHR10681 2 184 6.7E-65 T 20-04-2016 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 PANTHER PTHR30346 1 312 3.8E-80 T 20-04-2016 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-8 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-8 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-8 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 SUPERFAMILY SSF53850 90 297 1.38E-29 T 20-04-2016 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-19 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 Gene3D G3DSA:3.40.190.10 91 175 1.9E-20 T 20-04-2016 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 PANTHER PTHR30346:SF15 1 312 3.8E-80 T 20-04-2016 APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 SUPERFAMILY SSF46785 1 85 2.92E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 Gene3D G3DSA:1.10.10.10 1 84 2.4E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 Pfam PF03466 LysR substrate binding domain 90 290 9.2E-32 T 20-04-2016 IPR005119 LysR, substrate-binding APS56_RS07680 98af561021e11f377fdf3124ecb64bd3 312 Gene3D G3DSA:3.40.190.10 176 254 1.1E-17 T 20-04-2016 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 Pfam PF00204 DNA gyrase B 236 368 1.6E-29 T 20-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PANTHER PTHR10169 3 618 8.1E-283 T 20-04-2016 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 Gene3D G3DSA:3.30.230.10 210 375 4.7E-45 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PANTHER PTHR10169:SF28 3 618 8.1E-283 T 20-04-2016 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 SUPERFAMILY SSF56719 398 607 2.07E-58 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 ProSitePatterns PS00177 DNA topoisomerase II signature. 412 420 - T 20-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR01159 DNA gyrase subunit B signature 585 601 7.2E-6 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR01159 DNA gyrase subunit B signature 344 358 7.2E-6 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR01159 DNA gyrase subunit B signature 358 378 7.2E-6 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR01159 DNA gyrase subunit B signature 192 205 7.2E-6 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 SMART SM00433 41 609 2.9E-149 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 Gene3D G3DSA:3.40.50.670 376 545 3.1E-61 T 20-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 SUPERFAMILY SSF55874 7 206 6.17E-42 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 Pfam PF01751 Toprim domain 409 505 7.0E-14 T 20-04-2016 IPR006171 Toprim domain APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 SMART SM00387 37 172 4.7E-6 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 SUPERFAMILY SSF54211 210 367 3.6E-32 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 170 5.9E-11 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 490 507 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 110 124 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 410 424 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 550 566 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 75 88 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 472 488 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 510 522 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 41 56 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 PRINTS PR00418 DNA topoisomerase II family signature 254 267 9.4E-50 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00740 7ee74b63b37c59111aa3daf34bab90d2 619 Gene3D G3DSA:3.30.565.10 7 209 2.3E-54 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS05940 a844fdf574bf8ea5349a3e6730e181ba 480 PANTHER PTHR10342 14 226 1.9E-82 T 20-04-2016 APS56_RS05940 a844fdf574bf8ea5349a3e6730e181ba 480 PANTHER PTHR10342:SF207 14 226 1.9E-82 T 20-04-2016 APS56_RS05940 a844fdf574bf8ea5349a3e6730e181ba 480 Pfam PF00884 Sulfatase 23 357 3.5E-42 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS05940 a844fdf574bf8ea5349a3e6730e181ba 480 Gene3D G3DSA:3.40.720.10 20 377 4.7E-75 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS05940 a844fdf574bf8ea5349a3e6730e181ba 480 PANTHER PTHR10342:SF207 249 473 1.9E-82 T 20-04-2016 APS56_RS05940 a844fdf574bf8ea5349a3e6730e181ba 480 SUPERFAMILY SSF53649 21 470 3.66E-87 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS05940 a844fdf574bf8ea5349a3e6730e181ba 480 Gene3D G3DSA:3.30.1120.10 390 477 8.8E-14 T 20-04-2016 APS56_RS05940 a844fdf574bf8ea5349a3e6730e181ba 480 PANTHER PTHR10342 249 473 1.9E-82 T 20-04-2016 APS56_RS05250 33110f8faa462d0ea02dd03ea4dea438 333 SUPERFAMILY SSF53448 4 131 1.88E-34 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05250 33110f8faa462d0ea02dd03ea4dea438 333 SUPERFAMILY SSF53448 184 316 1.88E-34 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05250 33110f8faa462d0ea02dd03ea4dea438 333 Pfam PF00535 Glycosyl transferase family 2 5 138 3.6E-16 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS05250 33110f8faa462d0ea02dd03ea4dea438 333 Gene3D G3DSA:3.90.550.10 172 268 1.9E-30 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05250 33110f8faa462d0ea02dd03ea4dea438 333 Gene3D G3DSA:3.90.550.10 2 139 1.9E-30 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05250 33110f8faa462d0ea02dd03ea4dea438 333 PANTHER PTHR22916 1 140 3.8E-23 T 20-04-2016 APS56_RS05250 33110f8faa462d0ea02dd03ea4dea438 333 PANTHER PTHR22916 186 302 3.8E-23 T 20-04-2016 APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 Gene3D G3DSA:1.10.10.10 112 174 6.1E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 18 171 2.7E-21 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 18 172 5.6E-38 T 20-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 Pfam PF08281 Sigma-70, region 4 120 165 3.5E-11 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 PANTHER PTHR30173:SF20 1 183 6.7E-34 T 20-04-2016 APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 Gene3D G3DSA:1.10.1740.10 3 104 1.4E-16 T 20-04-2016 APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 SUPERFAMILY SSF88946 4 95 8.63E-15 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 PANTHER PTHR30173 1 183 6.7E-34 T 20-04-2016 APS56_RS09650 2f165b727275104375a71b682e6ad76b 185 SUPERFAMILY SSF88659 111 174 7.2E-14 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 Gene3D G3DSA:3.90.800.10 71 202 2.3E-34 T 20-04-2016 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PRINTS PR00987 Glutamyl-tRNA synthetase signature 217 225 3.6E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 3.6E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 3.6E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 3.6E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PRINTS PR00987 Glutamyl-tRNA synthetase signature 201 211 3.6E-26 T 20-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 500 32.051 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 Gene3D G3DSA:3.40.50.620 5 70 1.8E-48 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 Gene3D G3DSA:3.40.50.620 203 252 1.8E-48 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 SUPERFAMILY SSF52374 5 339 2.48E-102 T 20-04-2016 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 346 1.3E-96 T 20-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 501 9.9E-152 T 20-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 Gene3D G3DSA:1.10.1160.10 257 354 3.6E-34 T 20-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 SUPERFAMILY SSF48163 340 500 1.96E-41 T 20-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 Gene3D G3DSA:1.10.10.350 402 500 5.1E-28 T 20-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PANTHER PTHR11451:SF26 374 381 1.2E-101 T 20-04-2016 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PANTHER PTHR11451:SF26 4 252 1.2E-101 T 20-04-2016 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PANTHER PTHR11451:SF26 284 351 1.2E-101 T 20-04-2016 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PANTHER PTHR11451 374 381 1.2E-101 T 20-04-2016 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PANTHER PTHR11451 4 252 1.2E-101 T 20-04-2016 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 PANTHER PTHR11451 284 351 1.2E-101 T 20-04-2016 APS56_RS10915 8fc02cfa31afef2f782ecf5e0c711a6b 503 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 175 191 1.5E-9 T 20-04-2016 APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 288 300 1.5E-9 T 20-04-2016 APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 208 222 1.5E-9 T 20-04-2016 APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 PANTHER PTHR30195:SF10 99 535 1.3E-98 T 20-04-2016 APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 PANTHER PTHR30195 99 535 1.3E-98 T 20-04-2016 APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 Gene3D G3DSA:3.40.50.150 177 437 8.5E-30 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 SUPERFAMILY SSF53335 539 580 1.11E-118 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 SUPERFAMILY SSF53335 75 484 1.11E-118 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 SUPERFAMILY SSF53335 6 44 1.11E-118 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 Pfam PF02384 N-6 DNA Methylase 155 468 3.9E-58 T 20-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 291 297 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APS56_RS02790 8de6e69def9fa6858793d381c64fe341 582 Pfam PF12161 HsdM N-terminal domain 9 140 6.3E-24 T 20-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain APS56_RS12030 ebda3934e650c76b58ac532e5535aa28 514 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 405 481 2.6E-6 T 20-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 APS56_RS12030 ebda3934e650c76b58ac532e5535aa28 514 Gene3D G3DSA:3.40.50.1110 401 488 7.3E-11 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS12030 ebda3934e650c76b58ac532e5535aa28 514 SUPERFAMILY SSF52266 382 487 5.5E-10 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 Pfam PF02911 Formyl transferase, C-terminal domain 216 317 2.1E-25 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 Pfam PF00551 Formyl transferase 15 190 2.9E-37 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 Gene3D G3DSA:3.10.25.10 219 323 7.4E-28 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 PANTHER PTHR11138 11 324 1.5E-90 T 20-04-2016 APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 14 317 9.9E-78 T 20-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 SUPERFAMILY SSF53328 14 208 2.22E-59 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 SUPERFAMILY SSF50486 217 319 3.61E-23 T 20-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 Gene3D G3DSA:3.40.50.170 13 208 9.4E-63 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS15830 d80e1dd4e74dbf70769b9b67ef5c67e5 325 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 14 319 32.515 T 20-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 SUPERFAMILY SSF53649 409 451 1.74E-90 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 SUPERFAMILY SSF53649 23 359 1.74E-90 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 Gene3D G3DSA:3.40.720.10 23 341 2.3E-65 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 ProSitePatterns PS00523 Sulfatases signature 1. 72 84 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 PANTHER PTHR10342:SF141 405 454 1.8E-108 T 20-04-2016 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 PANTHER PTHR10342:SF141 1 364 1.8E-108 T 20-04-2016 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 Gene3D G3DSA:3.30.1120.10 411 458 1.9E-15 T 20-04-2016 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 Gene3D G3DSA:3.30.1120.10 342 361 1.9E-15 T 20-04-2016 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 PANTHER PTHR10342 405 454 1.8E-108 T 20-04-2016 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 PANTHER PTHR10342 1 364 1.8E-108 T 20-04-2016 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 Pfam PF16347 Domain of unknown function (DUF4976) 402 452 2.2E-7 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS06655 b555f2c5ca4aa3e56e4bc787ad24daa0 460 Pfam PF00884 Sulfatase 25 300 2.9E-37 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS11815 906cf06a7a39ea33bb35fd4137e6ea82 482 PANTHER PTHR30508:SF1 1 482 0.0 T 20-04-2016 APS56_RS11815 906cf06a7a39ea33bb35fd4137e6ea82 482 PANTHER PTHR30508 1 482 0.0 T 20-04-2016 APS56_RS11815 906cf06a7a39ea33bb35fd4137e6ea82 482 Pfam PF01458 Uncharacterized protein family (UPF0051) 221 453 5.5E-67 T 20-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APS56_RS11815 906cf06a7a39ea33bb35fd4137e6ea82 482 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 17 473 2.1E-192 T 20-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 APS56_RS11815 906cf06a7a39ea33bb35fd4137e6ea82 482 SUPERFAMILY SSF101960 38 479 4.58E-138 T 20-04-2016 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PANTHER PTHR19384:SF76 566 711 1.4E-32 T 20-04-2016 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PRINTS PR00369 Flavodoxin signature 420 430 4.0E-6 T 20-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PRINTS PR00369 Flavodoxin signature 344 357 4.0E-6 T 20-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PRINTS PR00369 Flavodoxin signature 390 401 4.0E-6 T 20-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 691 699 2.5E-7 T 20-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 668 684 2.5E-7 T 20-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 601 620 2.5E-7 T 20-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 528 538 2.5E-7 T 20-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 SUPERFAMILY SSF52218 340 481 5.76E-25 T 20-04-2016 IPR029039 Flavoprotein-like domain APS56_RS11580 0e4e9a869194253764cac339254564cf 730 Pfam PF00175 Oxidoreductase NAD-binding domain 602 704 2.2E-8 T 20-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 Pfam PF03929 PepSY-associated TM region 9 325 2.6E-35 T 20-04-2016 IPR005625 PepSY-associated TM protein APS56_RS11580 0e4e9a869194253764cac339254564cf 730 Gene3D G3DSA:3.40.50.360 331 480 3.7E-21 T 20-04-2016 IPR029039 Flavoprotein-like domain APS56_RS11580 0e4e9a869194253764cac339254564cf 730 SUPERFAMILY SSF63380 484 594 2.48E-13 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 PANTHER PTHR19384 566 711 1.4E-32 T 20-04-2016 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 Pfam PF00258 Flavodoxin 345 449 9.0E-12 T 20-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 SUPERFAMILY SSF52343 591 714 2.1E-23 T 20-04-2016 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 Gene3D G3DSA:2.40.30.10 503 582 5.7E-8 T 20-04-2016 APS56_RS11580 0e4e9a869194253764cac339254564cf 730 Gene3D G3DSA:3.40.50.80 589 713 1.6E-25 T 20-04-2016 APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 TIGRFAM TIGR00260 thrC: threonine synthase 66 397 1.8E-83 T 20-04-2016 IPR004450 Threonine synthase-like APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 378 9.6E-21 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 20-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 PANTHER PTHR10314 53 409 9.4E-109 T 20-04-2016 APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 PANTHER PTHR10314 25 37 9.4E-109 T 20-04-2016 APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 Gene3D G3DSA:3.40.50.1100 106 196 1.7E-12 T 20-04-2016 APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 Gene3D G3DSA:3.90.1380.10 1 85 3.6E-23 T 20-04-2016 IPR029144 Threonine synthase, N-terminal APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 Gene3D G3DSA:3.40.50.1100 197 406 4.5E-65 T 20-04-2016 APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 SUPERFAMILY SSF53686 1 428 2.88E-124 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 PANTHER PTHR10314:SF1 53 409 9.4E-109 T 20-04-2016 APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 PANTHER PTHR10314:SF1 25 37 9.4E-109 T 20-04-2016 APS56_RS03585 7d73c59966d303dd97b14d085e1eba61 430 Pfam PF14821 Threonine synthase N terminus 2 79 2.9E-17 T 20-04-2016 IPR029144 Threonine synthase, N-terminal APS56_RS03515 e1cc06dda1eda207b17ade166f7ffaa4 273 PANTHER PTHR22911:SF6 1 267 1.0E-70 T 20-04-2016 APS56_RS03515 e1cc06dda1eda207b17ade166f7ffaa4 273 Pfam PF00892 EamA-like transporter family 134 263 5.3E-16 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS03515 e1cc06dda1eda207b17ade166f7ffaa4 273 Pfam PF00892 EamA-like transporter family 2 124 2.6E-13 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS03515 e1cc06dda1eda207b17ade166f7ffaa4 273 PANTHER PTHR22911 1 267 1.0E-70 T 20-04-2016 APS56_RS03515 e1cc06dda1eda207b17ade166f7ffaa4 273 SUPERFAMILY SSF103481 168 267 4.84E-13 T 20-04-2016 APS56_RS03515 e1cc06dda1eda207b17ade166f7ffaa4 273 SUPERFAMILY SSF103481 30 125 1.44E-16 T 20-04-2016 APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 PANTHER PTHR30153 10 473 5.2E-195 T 20-04-2016 APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 SUPERFAMILY SSF52540 198 455 4.74E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 Pfam PF03796 DnaB-like helicase C terminal domain 200 463 9.5E-108 T 20-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 Gene3D G3DSA:3.40.50.300 190 465 1.2E-96 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 Gene3D G3DSA:1.10.860.10 26 128 1.8E-32 T 20-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 Pfam PF00772 DnaB-like helicase N terminal domain 26 126 2.0E-30 T 20-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 SUPERFAMILY SSF48024 24 136 5.49E-31 T 20-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 SMART SM00382 217 416 8.1E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS04020 d0ab1a3c807d9fe2c620ba52c94101ce 513 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 26 465 9.7E-167 T 20-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 Pfam PF04055 Radical SAM superfamily 109 279 3.7E-13 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 PIRSF PIRSF006004 3 346 8.1E-121 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 344 4.6E-115 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 PANTHER PTHR30544:SF5 1 345 1.4E-136 T 20-04-2016 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 346 65.561 T 20-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 SUPERFAMILY SSF102114 105 306 1.11E-16 T 20-04-2016 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 Gene3D G3DSA:3.20.20.70 106 332 4.5E-20 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 PANTHER PTHR30544 1 345 1.4E-136 T 20-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS07265 992f53a95033e94c8955e85a98e07dfd 346 Pfam PF13394 4Fe-4S single cluster domain 113 217 1.2E-7 T 20-04-2016 APS56_RS13300 1025b8e16f8cec121abee8909b4542c4 214 Pfam PF13306 Leucine rich repeats (6 copies) 80 205 1.9E-28 T 20-04-2016 IPR026906 Leucine rich repeat 5 APS56_RS13300 1025b8e16f8cec121abee8909b4542c4 214 SUPERFAMILY SSF52058 79 196 1.79E-5 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS13300 1025b8e16f8cec121abee8909b4542c4 214 PANTHER PTHR11017:SF165 76 208 3.8E-26 T 20-04-2016 APS56_RS13300 1025b8e16f8cec121abee8909b4542c4 214 PANTHER PTHR11017 76 208 3.8E-26 T 20-04-2016 APS56_RS02085 c16588e87e518735ffd963c81c79adef 355 PANTHER PTHR21090 29 354 1.5E-108 T 20-04-2016 APS56_RS02085 c16588e87e518735ffd963c81c79adef 355 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 11 343 1.4E-100 T 20-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APS56_RS02085 c16588e87e518735ffd963c81c79adef 355 Pfam PF01761 3-dehydroquinate synthase 62 319 5.0E-83 T 20-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APS56_RS02085 c16588e87e518735ffd963c81c79adef 355 Gene3D G3DSA:3.40.50.1970 8 167 3.2E-54 T 20-04-2016 APS56_RS02085 c16588e87e518735ffd963c81c79adef 355 SUPERFAMILY SSF56796 11 350 5.89E-82 T 20-04-2016 APS56_RS02085 c16588e87e518735ffd963c81c79adef 355 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 7 352 30.968 T 20-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APS56_RS02085 c16588e87e518735ffd963c81c79adef 355 PIRSF PIRSF001455 2 351 3.1E-102 T 20-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APS56_RS02085 c16588e87e518735ffd963c81c79adef 355 Gene3D G3DSA:1.20.1090.10 168 351 1.6E-45 T 20-04-2016 APS56_RS14580 098a81d7853a29a9076a557d43005bae 424 Gene3D G3DSA:1.20.1600.10 26 423 1.5E-60 T 20-04-2016 APS56_RS14580 098a81d7853a29a9076a557d43005bae 424 PANTHER PTHR30026 1 424 2.0E-61 T 20-04-2016 APS56_RS14580 098a81d7853a29a9076a557d43005bae 424 Pfam PF02321 Outer membrane efflux protein 240 423 9.7E-34 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS14580 098a81d7853a29a9076a557d43005bae 424 Pfam PF02321 Outer membrane efflux protein 31 215 1.2E-26 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS14580 098a81d7853a29a9076a557d43005bae 424 SUPERFAMILY SSF56954 4 423 1.26E-72 T 20-04-2016 APS56_RS14580 098a81d7853a29a9076a557d43005bae 424 PANTHER PTHR30026:SF6 1 424 2.0E-61 T 20-04-2016 APS56_RS09210 fdb01d08f33b96f121a19fe92848806b 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 3.5E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS09210 fdb01d08f33b96f121a19fe92848806b 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 3.5E-9 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS09210 fdb01d08f33b96f121a19fe92848806b 201 Gene3D G3DSA:1.10.357.10 52 187 5.4E-10 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APS56_RS09210 fdb01d08f33b96f121a19fe92848806b 201 PANTHER PTHR30055:SF47 2 93 2.7E-18 T 20-04-2016 APS56_RS09210 fdb01d08f33b96f121a19fe92848806b 201 Gene3D G3DSA:1.10.10.60 2 51 2.1E-18 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09210 fdb01d08f33b96f121a19fe92848806b 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 51 2.4E-15 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS09210 fdb01d08f33b96f121a19fe92848806b 201 SUPERFAMILY SSF46689 2 75 1.2E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09210 fdb01d08f33b96f121a19fe92848806b 201 PANTHER PTHR30055 2 93 2.7E-18 T 20-04-2016 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 SUPERFAMILY SSF101904 496 827 1.96E-98 T 20-04-2016 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 SMART SM00434 10 462 1.7E-274 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 469 8.9E-159 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 SUPERFAMILY SSF56719 29 484 2.88E-176 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Gene3D G3DSA:3.30.1360.40 235 330 3.3E-36 T 20-04-2016 IPR024946 Arginine repressor C-terminal-like domain APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Gene3D G3DSA:2.120.10.90 494 817 2.3E-119 T 20-04-2016 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Gene3D G3DSA:3.90.199.10 29 234 1.7E-119 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Gene3D G3DSA:3.90.199.10 331 396 1.7E-119 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 503 546 1.7E-10 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 667 707 1.7E-6 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 771 816 3.1E-11 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 714 767 3.1E-6 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 552 599 6.3E-7 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 613 654 1.0E-8 T 20-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 PANTHER PTHR10169:SF48 1 787 0.0 T 20-04-2016 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 PANTHER PTHR10169 1 787 0.0 T 20-04-2016 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 818 0.0 T 20-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APS56_RS03265 63172c720ad38fe02ce59b876a69201b 854 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 821 28.984 T 20-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APS56_RS08310 2fc21cee2a776edad70ed33283add62e 148 SMART SM00448 6 124 4.7E-14 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS08310 2fc21cee2a776edad70ed33283add62e 148 Pfam PF00072 Response regulator receiver domain 8 124 2.4E-17 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS08310 2fc21cee2a776edad70ed33283add62e 148 SUPERFAMILY SSF52172 6 134 1.39E-22 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS08310 2fc21cee2a776edad70ed33283add62e 148 Gene3D G3DSA:3.40.50.2300 3 135 2.2E-27 T 20-04-2016 APS56_RS08310 2fc21cee2a776edad70ed33283add62e 148 PANTHER PTHR26402 6 128 2.0E-21 T 20-04-2016 APS56_RS12635 4cb48569c7e382d918e89cdc5f5de7ba 535 Pfam PF08666 SAF domain 12 82 7.2E-7 T 20-04-2016 IPR013974 SAF domain APS56_RS12635 4cb48569c7e382d918e89cdc5f5de7ba 535 PANTHER PTHR30536:SF5 1 535 3.0E-138 T 20-04-2016 APS56_RS12635 4cb48569c7e382d918e89cdc5f5de7ba 535 PANTHER PTHR30536 1 535 3.0E-138 T 20-04-2016 APS56_RS12635 4cb48569c7e382d918e89cdc5f5de7ba 535 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 110 533 9.5E-150 T 20-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 APS56_RS12635 4cb48569c7e382d918e89cdc5f5de7ba 535 SMART SM00858 12 83 2.8E-8 T 20-04-2016 IPR013974 SAF domain APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 PIRSF PIRSF500136 1 404 8.1E-138 T 20-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 6 180 1.5E-50 T 20-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 391 1.0E-112 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 PANTHER PTHR11374 1 404 4.3E-148 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 SUPERFAMILY SSF51735 6 191 6.09E-42 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 285 6.9E-25 T 20-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 Gene3D G3DSA:3.40.50.720 4 219 4.2E-56 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 SUPERFAMILY SSF48179 198 286 8.67E-26 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 PANTHER PTHR11374:SF4 1 404 4.3E-148 T 20-04-2016 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 403 1.8E-16 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 SUPERFAMILY SSF52413 309 402 4.32E-19 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 SMART SM00984 313 404 5.8E-20 T 20-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 Gene3D G3DSA:3.40.50.720 230 403 2.1E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10805 462bd1bfeea9dcd834402a33bfcb4e02 404 PIRSF PIRSF000124 4 404 9.7E-70 T 20-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APS56_RS01740 f4bc037feda19f7c0cbfa96792cb6e02 162 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 74 9.9E-10 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APS56_RS01740 f4bc037feda19f7c0cbfa96792cb6e02 162 Gene3D G3DSA:3.40.50.1240 1 160 5.6E-44 T 20-04-2016 IPR029033 Histidine phosphatase superfamily APS56_RS01740 f4bc037feda19f7c0cbfa96792cb6e02 162 PANTHER PTHR23029 1 70 1.3E-16 T 20-04-2016 APS56_RS01740 f4bc037feda19f7c0cbfa96792cb6e02 162 SUPERFAMILY SSF53254 1 152 2.23E-25 T 20-04-2016 IPR029033 Histidine phosphatase superfamily APS56_RS01740 f4bc037feda19f7c0cbfa96792cb6e02 162 PANTHER PTHR23029:SF49 1 70 1.3E-16 T 20-04-2016 APS56_RS01740 f4bc037feda19f7c0cbfa96792cb6e02 162 SMART SM00855 3 116 6.8E-4 T 20-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APS56_RS16495 ca0d17cc51047359be943112ee23294d 334 PANTHER PTHR22916 2 283 9.9E-43 T 20-04-2016 APS56_RS16495 ca0d17cc51047359be943112ee23294d 334 Gene3D G3DSA:3.90.550.10 3 243 1.0E-45 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS16495 ca0d17cc51047359be943112ee23294d 334 Pfam PF00535 Glycosyl transferase family 2 6 170 2.9E-28 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS16495 ca0d17cc51047359be943112ee23294d 334 SUPERFAMILY SSF53448 3 229 4.69E-47 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS16495 ca0d17cc51047359be943112ee23294d 334 PANTHER PTHR22916:SF28 2 283 9.9E-43 T 20-04-2016 APS56_RS16495 ca0d17cc51047359be943112ee23294d 334 Gene3D G3DSA:3.40.50.20 244 325 9.7E-5 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 3 360 3.6E-57 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 Gene3D G3DSA:3.40.1390.30 1 113 1.2E-46 T 20-04-2016 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 PANTHER PTHR13799:SF13 155 364 3.5E-112 T 20-04-2016 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 PANTHER PTHR13799:SF13 1 133 3.5E-112 T 20-04-2016 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 SUPERFAMILY SSF102705 1 363 1.16E-120 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 346 5.9E-74 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 PANTHER PTHR13799 155 364 3.5E-112 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 PANTHER PTHR13799 1 133 3.5E-112 T 20-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 Gene3D G3DSA:3.40.1390.30 236 326 7.3E-32 T 20-04-2016 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 Gene3D G3DSA:3.40.1390.30 114 129 7.3E-32 T 20-04-2016 APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 PIRSF PIRSF037489 1 364 4.2E-122 T 20-04-2016 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria APS56_RS14705 50c5dd1f87930fb2ca020b107cd170e3 364 Gene3D G3DSA:3.30.70.830 130 235 3.9E-37 T 20-04-2016 APS56_RS10330 69478a813325515451d639122665bc6e 256 PANTHER PTHR24078 177 248 2.7E-16 T 20-04-2016 APS56_RS10330 69478a813325515451d639122665bc6e 256 PANTHER PTHR24078 60 75 2.7E-16 T 20-04-2016 APS56_RS10330 69478a813325515451d639122665bc6e 256 SMART SM00271 192 255 2.6E-20 T 20-04-2016 IPR001623 DnaJ domain APS56_RS10330 69478a813325515451d639122665bc6e 256 Pfam PF00226 DnaJ domain 193 252 7.8E-17 T 20-04-2016 IPR001623 DnaJ domain APS56_RS10330 69478a813325515451d639122665bc6e 256 Pfam PF05099 Tellurite resistance protein TerB 51 185 4.4E-26 T 20-04-2016 IPR007791 Co-chaperone DjlA, N-terminal APS56_RS10330 69478a813325515451d639122665bc6e 256 SUPERFAMILY SSF46565 185 251 1.24E-18 T 20-04-2016 IPR001623 DnaJ domain APS56_RS10330 69478a813325515451d639122665bc6e 256 SUPERFAMILY SSF158682 19 206 1.52E-28 T 20-04-2016 IPR029024 TerB-like APS56_RS10330 69478a813325515451d639122665bc6e 256 PRINTS PR00625 DnaJ domain signature 213 228 2.1E-12 T 20-04-2016 IPR001623 DnaJ domain APS56_RS10330 69478a813325515451d639122665bc6e 256 PRINTS PR00625 DnaJ domain signature 235 255 2.1E-12 T 20-04-2016 IPR001623 DnaJ domain APS56_RS10330 69478a813325515451d639122665bc6e 256 PRINTS PR00625 DnaJ domain signature 195 213 2.1E-12 T 20-04-2016 IPR001623 DnaJ domain APS56_RS10330 69478a813325515451d639122665bc6e 256 Gene3D G3DSA:1.10.3680.10 19 197 9.9E-25 T 20-04-2016 IPR029024 TerB-like APS56_RS10330 69478a813325515451d639122665bc6e 256 Gene3D G3DSA:1.10.287.110 198 252 6.1E-18 T 20-04-2016 IPR001623 DnaJ domain APS56_RS00495 f24056c8fef0f01420c5aaae4105f491 142 Pfam PF13648 Lipocalin-like domain 33 104 9.2E-5 T 20-04-2016 IPR024311 Lipocalin-like domain APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 Gene3D G3DSA:2.60.220.10 895 1022 2.4E-30 T 20-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 SUPERFAMILY SSF49863 895 1022 7.46E-25 T 20-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 Pfam PF09093 Lyase, catalytic 232 573 1.3E-76 T 20-04-2016 IPR015177 Lyase, catalytic APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 PANTHER PTHR37322 107 963 1.2E-129 T 20-04-2016 APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 SUPERFAMILY SSF74650 593 885 2.83E-58 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 SUPERFAMILY SSF48230 259 575 4.12E-65 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 Gene3D G3DSA:1.50.10.100 242 579 9.0E-78 T 20-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 Gene3D G3DSA:2.60.120.410 22 205 6.8E-35 T 20-04-2016 IPR015176 Lyase, N-terminal APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 896 957 1.3E-5 T 20-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 SUPERFAMILY SSF49785 30 204 6.55E-25 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 Gene3D G3DSA:2.70.98.10 593 888 1.6E-70 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 Pfam PF09092 Lyase, N terminal 35 203 8.3E-29 T 20-04-2016 IPR015176 Lyase, N-terminal APS56_RS04620 85fd9135ff5e092435db44d1cf600bc3 1023 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 598 875 2.5E-34 T 20-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 APS56_RS11960 2f3c6d4331a226c7d277729cd5ad1704 135 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 17 33 - T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APS56_RS11960 2f3c6d4331a226c7d277729cd5ad1704 135 Pfam PF00472 RF-1 domain 9 128 1.1E-16 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APS56_RS11960 2f3c6d4331a226c7d277729cd5ad1704 135 PANTHER PTHR11075 3 127 4.0E-23 T 20-04-2016 APS56_RS11960 2f3c6d4331a226c7d277729cd5ad1704 135 SUPERFAMILY SSF110916 8 92 2.35E-10 T 20-04-2016 APS56_RS11960 2f3c6d4331a226c7d277729cd5ad1704 135 Gene3D G3DSA:3.30.160.200 9 102 5.9E-26 T 20-04-2016 APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 SUPERFAMILY SSF56601 230 586 1.77E-84 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 PANTHER PTHR30627 1 587 4.0E-142 T 20-04-2016 APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 Gene3D G3DSA:3.40.710.10 229 586 4.2E-91 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 SUPERFAMILY SSF56519 37 229 1.7E-38 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 Pfam PF03717 Penicillin-binding Protein dimerisation domain 46 206 2.3E-30 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 PANTHER PTHR30627:SF2 1 587 4.0E-142 T 20-04-2016 APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 Gene3D G3DSA:3.90.1310.10 112 227 6.9E-21 T 20-04-2016 APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 2 585 1.6E-140 T 20-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 APS56_RS08200 338581d32ee16ac4ee51f4fee3d53398 646 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 580 1.4E-59 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 SUPERFAMILY SSF52518 1 203 3.37E-69 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 Pfam PF02780 Transketolase, C-terminal domain 193 315 3.2E-39 T 20-04-2016 IPR033248 Transketolase, C-terminal domain APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 Gene3D G3DSA:3.40.50.970 1 193 2.7E-87 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 2.3E-47 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 SMART SM00861 4 179 8.7E-60 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 Gene3D G3DSA:3.40.50.920 194 323 4.0E-45 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 PANTHER PTHR11624 1 325 1.2E-155 T 20-04-2016 IPR033247 Transketolase family APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 SUPERFAMILY SSF52922 187 323 8.38E-41 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS08805 ab7f3355be272c69f9a489588504db5d 325 PANTHER PTHR11624:SF11 1 325 1.2E-155 T 20-04-2016 APS56_RS09415 a81132030147215c43a158e65cd832a0 143 Gene3D G3DSA:3.40.140.10 10 135 5.7E-36 T 20-04-2016 APS56_RS09415 a81132030147215c43a158e65cd832a0 143 PIRSF PIRSF006019 1 142 6.6E-43 T 20-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 APS56_RS09415 a81132030147215c43a158e65cd832a0 143 PANTHER PTHR11086 13 135 2.7E-32 T 20-04-2016 IPR015517 Deoxycytidylate deaminase-related APS56_RS09415 a81132030147215c43a158e65cd832a0 143 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 105 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APS56_RS09415 a81132030147215c43a158e65cd832a0 143 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 116 1.2E-25 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APS56_RS09415 a81132030147215c43a158e65cd832a0 143 SUPERFAMILY SSF53927 10 137 1.54E-34 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 PANTHER PTHR33238:SF1 1 215 3.7E-57 T 20-04-2016 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 SMART SM00529 25 124 4.1E-36 T 20-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 SUPERFAMILY SSF47979 64 137 9.16E-27 T 20-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 Gene3D G3DSA:1.10.10.10 2 72 1.3E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 Gene3D G3DSA:1.10.60.10 74 138 5.2E-30 T 20-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 2 61 5.1E-15 T 20-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 64 133 7.5E-31 T 20-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 PANTHER PTHR33238 1 215 3.7E-57 T 20-04-2016 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 SUPERFAMILY SSF46785 3 62 6.17E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 Pfam PF04023 FeoA domain 146 216 3.7E-7 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APS56_RS10200 2b81af39b5459387ddf17fe90d4b4403 218 SMART SM00899 144 217 1.3E-6 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APS56_RS00425 4d54fd10db69a7cd5aa3e884791a313a 506 Pfam PF03321 GH3 auxin-responsive promoter 237 494 1.6E-44 T 20-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- APS56_RS00425 4d54fd10db69a7cd5aa3e884791a313a 506 Pfam PF03321 GH3 auxin-responsive promoter 22 174 4.4E-20 T 20-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- APS56_RS00425 4d54fd10db69a7cd5aa3e884791a313a 506 PANTHER PTHR31901 22 498 6.8E-18 T 20-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- APS56_RS00425 4d54fd10db69a7cd5aa3e884791a313a 506 PANTHER PTHR31901:SF5 22 498 6.8E-18 T 20-04-2016 APS56_RS13440 706e496973dd50633da431286732c7d5 293 Gene3D G3DSA:3.40.50.300 7 187 3.4E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13440 706e496973dd50633da431286732c7d5 293 PANTHER PTHR11649:SF3 2 293 6.3E-104 T 20-04-2016 APS56_RS13440 706e496973dd50633da431286732c7d5 293 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 163 3.0E-24 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS13440 706e496973dd50633da431286732c7d5 293 Pfam PF07650 KH domain 204 280 1.1E-18 T 20-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APS56_RS13440 706e496973dd50633da431286732c7d5 293 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 57 72 9.2E-7 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS13440 706e496973dd50633da431286732c7d5 293 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 8 28 9.2E-7 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS13440 706e496973dd50633da431286732c7d5 293 SUPERFAMILY SSF52540 10 200 1.56E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13440 706e496973dd50633da431286732c7d5 293 TIGRFAM TIGR00436 era: GTP-binding protein Era 6 274 2.9E-80 T 20-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APS56_RS13440 706e496973dd50633da431286732c7d5 293 Pfam PF01926 50S ribosome-binding GTPase 8 121 1.3E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS13440 706e496973dd50633da431286732c7d5 293 SUPERFAMILY SSF54814 177 292 4.77E-39 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APS56_RS13440 706e496973dd50633da431286732c7d5 293 Gene3D G3DSA:3.30.300.20 188 288 1.4E-37 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS13440 706e496973dd50633da431286732c7d5 293 Hamap MF_00367 GTPase Era [era]. 3 291 34.077 T 20-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APS56_RS13440 706e496973dd50633da431286732c7d5 293 PANTHER PTHR11649 2 293 6.3E-104 T 20-04-2016 APS56_RS02635 fc31370bf10dedac26a0ea84f2f437bb 135 SUPERFAMILY SSF55961 13 133 9.62E-9 T 20-04-2016 APS56_RS02635 fc31370bf10dedac26a0ea84f2f437bb 135 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 130 2.8E-6 T 20-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 APS56_RS02635 fc31370bf10dedac26a0ea84f2f437bb 135 Gene3D G3DSA:3.30.530.20 18 131 2.4E-6 T 20-04-2016 IPR023393 START-like domain APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 15 283 1.3E-88 T 20-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 114 283 5.9E-54 T 20-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 Gene3D G3DSA:3.90.1170.20 8 134 4.4E-46 T 20-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 Gene3D G3DSA:3.20.20.70 135 274 4.7E-53 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 23 112 4.5E-26 T 20-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 SUPERFAMILY SSF51690 114 283 2.35E-52 T 20-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 PANTHER PTHR32179 9 283 3.1E-110 T 20-04-2016 APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 PIRSF PIRSF006250 5 286 1.5E-82 T 20-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD APS56_RS03895 6c7efc3a05ae8591d346c74697485cdf 286 SUPERFAMILY SSF54675 5 112 5.59E-28 T 20-04-2016 APS56_RS16155 00505de96bcc974ebc823f85f289d254 113 Pfam PF03960 ArsC family 13 112 1.8E-12 T 20-04-2016 IPR006660 Arsenate reductase-like APS56_RS16155 00505de96bcc974ebc823f85f289d254 113 PANTHER PTHR30041:SF4 2 113 4.4E-31 T 20-04-2016 APS56_RS16155 00505de96bcc974ebc823f85f289d254 113 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 2 113 7.7E-33 T 20-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 APS56_RS16155 00505de96bcc974ebc823f85f289d254 113 PANTHER PTHR30041 2 113 4.4E-31 T 20-04-2016 APS56_RS16155 00505de96bcc974ebc823f85f289d254 113 Gene3D G3DSA:3.40.30.10 1 113 1.3E-38 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS16155 00505de96bcc974ebc823f85f289d254 113 SUPERFAMILY SSF52833 1 113 5.22E-27 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Pfam PF05190 MutS family domain IV 429 520 1.4E-27 T 20-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 SUPERFAMILY SSF48334 269 565 3.92E-81 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Pfam PF05188 MutS domain II 129 254 4.4E-18 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Gene3D G3DSA:3.40.50.300 569 803 8.9E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Gene3D G3DSA:1.10.1420.10 265 467 5.6E-47 T 20-04-2016 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 PANTHER PTHR11361 2 870 0.0 T 20-04-2016 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 SMART SM00534 611 799 3.4E-105 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Pfam PF05192 MutS domain III 272 560 1.3E-37 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 SMART SM00533 284 592 7.7E-90 T 20-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 692 708 - T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 8 856 23.863 T 20-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 SUPERFAMILY SSF53150 115 268 8.37E-41 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Pfam PF01624 MutS domain I 9 120 1.4E-37 T 20-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 PANTHER PTHR11361:SF86 2 870 0.0 T 20-04-2016 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Gene3D G3DSA:3.40.1170.10 3 121 8.4E-45 T 20-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 SUPERFAMILY SSF55271 3 114 2.49E-38 T 20-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Pfam PF00488 MutS domain V 615 802 2.1E-80 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 Gene3D G3DSA:3.30.420.110 127 257 3.1E-37 T 20-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 SUPERFAMILY SSF52540 568 803 9.25E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 PIRSF PIRSF037677 2 864 2.3E-165 T 20-04-2016 APS56_RS13260 e8ea94fe7c09ceb55cadf20e9b6d5caa 870 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 9 861 8.6E-272 T 20-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 Gene3D G3DSA:2.40.30.10 321 394 3.6E-21 T 20-04-2016 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 Gene3D G3DSA:3.40.50.620 2 213 2.3E-87 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 Gene3D G3DSA:2.30.30.280 258 310 4.9E-20 T 20-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 2 395 38.356 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 PANTHER PTHR11933 1 218 4.7E-147 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 PANTHER PTHR11933 250 394 4.7E-147 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 SUPERFAMILY SSF52402 1 220 2.43E-49 T 20-04-2016 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 Pfam PF03054 tRNA methyl transferase 2 228 4.2E-88 T 20-04-2016 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 Pfam PF03054 tRNA methyl transferase 248 394 1.2E-30 T 20-04-2016 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 PANTHER PTHR11933:SF10 1 218 4.7E-147 T 20-04-2016 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 PANTHER PTHR11933:SF10 250 394 4.7E-147 T 20-04-2016 APS56_RS04380 b14fd7cb24c128ed8487266822bcea31 395 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 2 229 9.7E-85 T 20-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APS56_RS01395 81f413f13754f78385300a48bad9beb9 100 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 31 73 2.0E-10 T 20-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 APS56_RS01395 81f413f13754f78385300a48bad9beb9 100 SUPERFAMILY SSF46955 26 82 5.49E-6 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS01395 81f413f13754f78385300a48bad9beb9 100 Gene3D G3DSA:1.10.10.10 26 86 1.7E-6 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS01395 81f413f13754f78385300a48bad9beb9 100 Pfam PF12728 Helix-turn-helix domain 26 76 4.8E-13 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 25 1122 2.7E-181 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 Pfam PF13715 CarboxypepD_reg-like domain 27 107 1.1E-12 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 Gene3D G3DSA:2.60.40.1120 27 115 7.6E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 218 248 6.9E-16 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532:SF57 655 1120 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532:SF57 209 322 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532:SF57 590 616 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532:SF57 343 481 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532:SF57 8 189 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532 655 1120 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532 209 322 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532 590 616 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532 343 481 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 PANTHER PTHR11532 8 189 6.0E-178 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 242 1.7E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 SUPERFAMILY SSF49464 25 105 5.76E-14 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 Gene3D G3DSA:2.170.130.10 121 252 2.5E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 SUPERFAMILY SSF56935 103 267 5.04E-61 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 SUPERFAMILY SSF56935 1035 1122 5.04E-61 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 SUPERFAMILY SSF56935 353 442 5.04E-61 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 SUPERFAMILY SSF56935 580 871 5.04E-61 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 SUPERFAMILY SSF56935 487 548 5.04E-61 T 20-04-2016 APS56_RS13535 4a421d77c1aba11f5d4e9b0295abe370 1122 SUPERFAMILY SSF56935 935 984 5.04E-61 T 20-04-2016 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Pfam PF07724 AAA domain (Cdc48 subfamily) 593 761 2.5E-51 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Gene3D G3DSA:3.40.50.300 157 339 2.3E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03715 92622ac50a10965445b2ac6009309227 868 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 857 0.0 T 20-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 844 4.3E-22 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APS56_RS03715 92622ac50a10965445b2ac6009309227 868 SMART SM00382 196 341 2.5E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS03715 92622ac50a10965445b2ac6009309227 868 SMART SM00382 594 737 6.5E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 336 3.2E-14 T 20-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 628 646 - T 20-04-2016 IPR028299 ClpA/B, conserved site 2 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Gene3D G3DSA:1.10.1780.10 1 145 7.0E-40 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 SUPERFAMILY SSF52540 543 858 5.4E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03715 92622ac50a10965445b2ac6009309227 868 PANTHER PTHR11638:SF18 1 862 0.0 T 20-04-2016 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 SUPERFAMILY SSF81923 4 154 3.01E-38 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Gene3D G3DSA:1.10.8.60 342 426 5.5E-36 T 20-04-2016 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Gene3D G3DSA:1.10.8.60 779 859 4.5E-27 T 20-04-2016 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 SUPERFAMILY SSF52540 155 542 1.94E-96 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03715 92622ac50a10965445b2ac6009309227 868 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 292 304 - T 20-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 PANTHER PTHR11638 1 862 0.0 T 20-04-2016 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 705 719 2.3E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 616 2.3E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 672 690 2.3E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 643 661 2.3E-41 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 3.3E-9 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 142 1.9E-10 T 20-04-2016 IPR004176 Clp, N-terminal GO:0019538 APS56_RS03715 92622ac50a10965445b2ac6009309227 868 SMART SM01086 768 857 3.8E-30 T 20-04-2016 IPR019489 Clp ATPase, C-terminal APS56_RS03715 92622ac50a10965445b2ac6009309227 868 Gene3D G3DSA:3.40.50.300 547 778 1.3E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12480 1c5badb74b93146db94ed87761aa995e 336 PANTHER PTHR30578 6 336 7.5E-126 T 20-04-2016 APS56_RS12480 1c5badb74b93146db94ed87761aa995e 336 PANTHER PTHR30578:SF0 6 336 7.5E-126 T 20-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APS56_RS12480 1c5badb74b93146db94ed87761aa995e 336 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 11 328 1.2E-116 T 20-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APS56_RS12480 1c5badb74b93146db94ed87761aa995e 336 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 6 330 27.055 T 20-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APS56_RS12480 1c5badb74b93146db94ed87761aa995e 336 Pfam PF03116 NQR2, RnfD, RnfE family 8 328 7.6E-118 T 20-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 APS56_RS12195 b4029f2322302795c316b692aedf8589 125 Gene3D G3DSA:2.40.50.140 35 125 2.8E-6 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS12195 b4029f2322302795c316b692aedf8589 125 SUPERFAMILY SSF50249 48 125 5.57E-7 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS12195 b4029f2322302795c316b692aedf8589 125 Pfam PF11325 Domain of unknown function (DUF3127) 2 89 7.8E-34 T 20-04-2016 IPR021474 Protein of unknown function DUF3127 APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 462 2.3E-233 T 20-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 Pfam PF00206 Lyase 11 343 5.0E-114 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 463 88.245 T 20-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 Gene3D G3DSA:1.10.40.30 406 462 2.0E-28 T 20-04-2016 APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 Pfam PF10415 Fumarase C C-terminus 409 462 7.7E-22 T 20-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 1.0E-35 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 1.0E-35 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 1.0E-35 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 1.0E-35 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 Gene3D G3DSA:1.10.275.10 2 139 2.7E-58 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 PANTHER PTHR11444 1 462 3.3E-249 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 Gene3D G3DSA:1.20.200.10 140 404 9.4E-105 T 20-04-2016 APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 SUPERFAMILY SSF48557 3 461 4.56E-152 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 APS56_RS16135 605cb0c22b25ee50fee7b0907d131b58 465 PANTHER PTHR11444:SF1 1 462 3.3E-249 T 20-04-2016 APS56_RS05700 32cba2ed0e01cf5f6a1d02422b8de7dd 426 PANTHER PTHR30480:SF3 53 425 1.2E-88 T 20-04-2016 APS56_RS05700 32cba2ed0e01cf5f6a1d02422b8de7dd 426 Pfam PF07075 Protein of unknown function (DUF1343) 74 425 5.9E-128 T 20-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 APS56_RS05700 32cba2ed0e01cf5f6a1d02422b8de7dd 426 PIRSF PIRSF016719 35 426 4.8E-101 T 20-04-2016 IPR008302 Uncharacterised conserved protein UCP016719 APS56_RS05700 32cba2ed0e01cf5f6a1d02422b8de7dd 426 PANTHER PTHR30480 53 425 1.2E-88 T 20-04-2016 APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 PANTHER PTHR10366:SF256 294 558 2.0E-117 T 20-04-2016 APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 Pfam PF13727 CoA-binding domain 80 250 1.8E-10 T 20-04-2016 APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 PANTHER PTHR10366 294 558 2.0E-117 T 20-04-2016 APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 SUPERFAMILY SSF53335 117 349 3.32E-14 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 SUPERFAMILY SSF51735 293 555 6.09E-58 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 Gene3D G3DSA:3.90.25.10 473 553 3.4E-6 T 20-04-2016 APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 Gene3D G3DSA:3.40.50.720 152 238 1.7E-15 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 Gene3D G3DSA:3.40.50.720 294 472 1.8E-50 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02110 0fda338f6c9f5ea8b8d63bb6ef39b098 651 Pfam PF02719 Polysaccharide biosynthesis protein 295 576 4.1E-119 T 20-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 SUPERFAMILY SSF54747 3 72 8.76E-28 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 SMART SM00649 9 140 6.6E-76 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 30.498 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 140 9.5E-62 T 20-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 Gene3D G3DSA:3.30.1550.10 2 71 2.7E-34 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 SUPERFAMILY SSF46906 67 139 2.88E-26 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 20-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.9E-27 T 20-04-2016 IPR020784 Ribosomal protein L11, N-terminal APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 3.4E-24 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 1.0E-13 T 20-04-2016 APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 PANTHER PTHR11661 1 141 1.4E-62 T 20-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APS56_RS05550 9642d82197a2409496c9b0ee9a0b42f8 145 Gene3D G3DSA:1.10.10.250 72 139 6.7E-31 T 20-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 SMART SM00382 400 586 1.1E-15 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 SUPERFAMILY SSF90123 95 357 4.05E-68 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 SUPERFAMILY SSF90123 7 54 4.05E-68 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 Gene3D G3DSA:3.40.50.300 376 604 3.7E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 PANTHER PTHR24221 94 613 2.6E-209 T 20-04-2016 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 PANTHER PTHR24221 4 53 2.6E-209 T 20-04-2016 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 Pfam PF00005 ABC transporter 391 540 4.7E-35 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 ProSitePatterns PS00211 ABC transporters family signature. 512 526 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 SUPERFAMILY SSF52540 366 610 1.09E-90 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 Gene3D G3DSA:1.20.1560.10 7 55 8.2E-74 T 20-04-2016 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 Gene3D G3DSA:1.20.1560.10 90 359 8.2E-74 T 20-04-2016 APS56_RS15195 1da67567d5d0f4948371668a771d6e1b 613 Pfam PF00664 ABC transporter transmembrane region 81 321 5.1E-44 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 SUPERFAMILY SSF50447 842 938 5.74E-34 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 SUPERFAMILY SSF52540 429 611 2.0E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 PANTHER PTHR23115:SF184 793 936 2.8E-193 T 20-04-2016 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 PANTHER PTHR23115:SF184 424 768 2.8E-193 T 20-04-2016 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 361 940 2.1E-245 T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 Gene3D G3DSA:2.40.30.10 842 938 2.3E-39 T 20-04-2016 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 PANTHER PTHR23115 793 936 2.8E-193 T 20-04-2016 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 PANTHER PTHR23115 424 768 2.8E-193 T 20-04-2016 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 4 938 17.074 T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 365 415 6.1E-11 T 20-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 Pfam PF11987 Translation-initiation factor 2 732 830 1.4E-35 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 Gene3D G3DSA:3.40.50.10050 740 819 1.3E-23 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 444 593 5.3E-31 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 Pfam PF00009 Elongation factor Tu GTP binding domain 443 600 9.6E-29 T 20-04-2016 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 Gene3D G3DSA:2.40.30.10 611 705 3.3E-19 T 20-04-2016 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 SUPERFAMILY SSF50447 612 694 2.04E-20 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 Gene3D G3DSA:3.40.50.300 431 599 3.0E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 ProSitePatterns PS01176 Initiation factor 2 signature. 891 913 - T 20-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APS56_RS12890 474c3ecbd605a24c90549a34d3c6798b 941 SUPERFAMILY SSF52156 719 847 7.45E-36 T 20-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 PANTHER PTHR11532:SF57 470 511 8.1E-214 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 PANTHER PTHR11532:SF57 1 354 8.1E-214 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 PANTHER PTHR11532:SF57 544 1058 8.1E-214 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 PANTHER PTHR11532 470 511 8.1E-214 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 PANTHER PTHR11532 1 354 8.1E-214 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 PANTHER PTHR11532 544 1058 8.1E-214 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 198 228 6.6E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Gene3D G3DSA:2.170.130.10 111 222 1.5E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 SUPERFAMILY SSF56935 887 930 1.1E-83 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 SUPERFAMILY SSF56935 472 810 1.1E-83 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 SUPERFAMILY SSF56935 103 246 1.1E-83 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 SUPERFAMILY SSF56935 300 388 1.1E-83 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 SUPERFAMILY SSF56935 961 1060 1.1E-83 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 SUPERFAMILY SSF49464 25 105 5.23E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Gene3D G3DSA:2.60.40.1120 27 110 8.6E-13 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Pfam PF13715 CarboxypepD_reg-like domain 27 107 3.8E-19 T 20-04-2016 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 26 1060 7.3E-230 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 222 4.3E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Gene3D G3DSA:2.40.170.20 895 1060 7.9E-43 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Gene3D G3DSA:2.40.170.20 467 819 7.9E-43 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Gene3D G3DSA:2.40.170.20 434 435 7.9E-43 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Gene3D G3DSA:2.40.170.20 223 242 7.9E-43 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15120 a28e5804add9b9492a0821624ca9c6d2 1060 Gene3D G3DSA:2.40.170.20 309 373 7.9E-43 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS05745 27221f67576468914cc963f76644df47 359 SUPERFAMILY SSF53756 4 356 4.03E-60 T 20-04-2016 APS56_RS05745 27221f67576468914cc963f76644df47 359 Pfam PF00534 Glycosyl transferases group 1 174 336 3.9E-33 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS05745 27221f67576468914cc963f76644df47 359 Pfam PF13439 Glycosyltransferase Family 4 14 164 4.2E-7 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS05745 27221f67576468914cc963f76644df47 359 Gene3D G3DSA:3.40.50.2000 175 332 1.3E-15 T 20-04-2016 APS56_RS05745 27221f67576468914cc963f76644df47 359 PANTHER PTHR12526 3 355 3.9E-38 T 20-04-2016 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 Pfam PF01227 GTP cyclohydrolase I 18 193 1.3E-76 T 20-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 SUPERFAMILY SSF55620 15 194 2.15E-77 T 20-04-2016 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 74 90 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 PANTHER PTHR11109 21 193 2.3E-113 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 19 194 1.2E-77 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 13 194 38.672 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 Gene3D G3DSA:1.10.286.10 15 64 1.0E-20 T 20-04-2016 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 Gene3D G3DSA:3.30.1130.10 67 194 1.1E-62 T 20-04-2016 APS56_RS03830 5621d2bb0109aa0913882d7c4b0a99c2 195 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 122 132 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS11340 5fa0a23112f46b37993afb9153d5cb9a 502 Pfam PF14322 Starch-binding associating with outer membrane 74 225 2.2E-26 T 20-04-2016 APS56_RS11340 5fa0a23112f46b37993afb9153d5cb9a 502 Pfam PF07980 SusD family 266 502 3.4E-37 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS11340 5fa0a23112f46b37993afb9153d5cb9a 502 Gene3D G3DSA:1.25.40.10 340 430 2.5E-36 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11340 5fa0a23112f46b37993afb9153d5cb9a 502 Gene3D G3DSA:1.25.40.10 205 307 2.5E-36 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11340 5fa0a23112f46b37993afb9153d5cb9a 502 SUPERFAMILY SSF48452 18 502 2.4E-112 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS07515 2c13adaf2533c82cc1e4684cc2c83358 249 PANTHER PTHR33546 91 249 3.9E-16 T 20-04-2016 APS56_RS07515 2c13adaf2533c82cc1e4684cc2c83358 249 PANTHER PTHR33546:SF1 91 249 3.9E-16 T 20-04-2016 APS56_RS07515 2c13adaf2533c82cc1e4684cc2c83358 249 Pfam PF06439 Domain of Unknown Function (DUF1080) 52 247 2.1E-35 T 20-04-2016 IPR010496 Domain of unknown function DUF1080 APS56_RS05395 e07fbbcc39479eda1879857c9ee2c845 196 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 36.47 T 20-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 APS56_RS05395 e07fbbcc39479eda1879857c9ee2c845 196 Gene3D G3DSA:3.40.50.300 8 195 7.2E-81 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05395 e07fbbcc39479eda1879857c9ee2c845 196 Pfam PF01583 Adenylylsulphate kinase 25 179 1.9E-67 T 20-04-2016 APS56_RS05395 e07fbbcc39479eda1879857c9ee2c845 196 PANTHER PTHR11055 12 195 3.9E-107 T 20-04-2016 APS56_RS05395 e07fbbcc39479eda1879857c9ee2c845 196 SUPERFAMILY SSF52540 20 194 2.81E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05395 e07fbbcc39479eda1879857c9ee2c845 196 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 15 191 5.4E-72 T 20-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 APS56_RS00810 e06027c094447f4066151b766883dc43 152 Pfam PF01668 SmpB protein 8 70 7.6E-27 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APS56_RS00810 e06027c094447f4066151b766883dc43 152 ProSitePatterns PS01317 SsrA-binding protein. 24 36 - T 20-04-2016 IPR020081 SsrA-binding protein, conserved site APS56_RS00810 e06027c094447f4066151b766883dc43 152 Hamap MF_00023 SsrA-binding protein [smpB]. 1 152 62.361 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APS56_RS00810 e06027c094447f4066151b766883dc43 152 PANTHER PTHR30308 4 152 2.4E-64 T 20-04-2016 APS56_RS00810 e06027c094447f4066151b766883dc43 152 SUPERFAMILY SSF74982 5 131 1.2E-42 T 20-04-2016 IPR023620 Small protein B APS56_RS00810 e06027c094447f4066151b766883dc43 152 TIGRFAM TIGR00086 smpB: SsrA-binding protein 7 147 3.9E-54 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APS56_RS00810 e06027c094447f4066151b766883dc43 152 Gene3D G3DSA:2.40.280.10 6 126 1.3E-46 T 20-04-2016 IPR023620 Small protein B APS56_RS00810 e06027c094447f4066151b766883dc43 152 PANTHER PTHR30308:SF2 4 152 2.4E-64 T 20-04-2016 APS56_RS00810 e06027c094447f4066151b766883dc43 152 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 131 6.0E-21 T 20-04-2016 IPR000037 SsrA-binding protein GO:0003723 APS56_RS12755 b6b0b1330952b5aafe8d2a64134a601d 224 PANTHER PTHR26402:SF151 5 200 2.3E-15 T 20-04-2016 APS56_RS12755 b6b0b1330952b5aafe8d2a64134a601d 224 PANTHER PTHR26402 5 200 2.3E-15 T 20-04-2016 APS56_RS12755 b6b0b1330952b5aafe8d2a64134a601d 224 SUPERFAMILY SSF52172 4 144 1.42E-12 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS12755 b6b0b1330952b5aafe8d2a64134a601d 224 Pfam PF00072 Response regulator receiver domain 7 123 1.3E-9 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS12755 b6b0b1330952b5aafe8d2a64134a601d 224 Gene3D G3DSA:1.10.10.10 157 202 8.6E-4 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12755 b6b0b1330952b5aafe8d2a64134a601d 224 Gene3D G3DSA:3.40.50.2300 5 140 1.8E-15 T 20-04-2016 APS56_RS12755 b6b0b1330952b5aafe8d2a64134a601d 224 SMART SM00448 5 134 1.2E-4 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 PANTHER PTHR32338:SF8 2 327 1.6E-113 T 20-04-2016 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 Gene3D G3DSA:3.30.360.10 146 295 2.5E-44 T 20-04-2016 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 PANTHER PTHR32338 2 327 1.6E-113 T 20-04-2016 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 132 148 - T 20-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 SUPERFAMILY SSF55347 137 295 3.14E-40 T 20-04-2016 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 4 321 31.682 T 20-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 SMART SM00859 5 129 7.9E-28 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 128 1.2E-23 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 Gene3D G3DSA:3.40.50.720 1 145 1.9E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 4 325 4.1E-91 T 20-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 146 298 5.9E-7 T 20-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07500 f2073c873463b7fcbf3d19319cbba11f 327 SUPERFAMILY SSF51735 3 151 3.61E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12875 da9ff90549f72b40674c08268a271060 274 PANTHER PTHR31964:SF26 1 143 3.0E-27 T 20-04-2016 APS56_RS12875 da9ff90549f72b40674c08268a271060 274 Gene3D G3DSA:3.40.50.620 1 143 2.0E-33 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12875 da9ff90549f72b40674c08268a271060 274 PRINTS PR01438 Universal stress protein signature 1 19 2.7E-19 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS12875 da9ff90549f72b40674c08268a271060 274 PRINTS PR01438 Universal stress protein signature 101 113 2.7E-19 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS12875 da9ff90549f72b40674c08268a271060 274 PRINTS PR01438 Universal stress protein signature 119 141 2.7E-19 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS12875 da9ff90549f72b40674c08268a271060 274 Gene3D G3DSA:3.40.50.620 147 273 2.1E-17 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12875 da9ff90549f72b40674c08268a271060 274 PANTHER PTHR31964 1 143 3.0E-27 T 20-04-2016 APS56_RS12875 da9ff90549f72b40674c08268a271060 274 Pfam PF00582 Universal stress protein family 1 141 4.5E-28 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS12875 da9ff90549f72b40674c08268a271060 274 Pfam PF00582 Universal stress protein family 224 271 2.6E-7 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS12875 da9ff90549f72b40674c08268a271060 274 SUPERFAMILY SSF52402 1 148 4.19E-35 T 20-04-2016 APS56_RS12875 da9ff90549f72b40674c08268a271060 274 SUPERFAMILY SSF52402 150 273 6.45E-20 T 20-04-2016 APS56_RS04780 253d110b1b054697b7d9d46cb4f27187 271 SUPERFAMILY SSF53474 36 269 3.34E-15 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS04780 253d110b1b054697b7d9d46cb4f27187 271 Gene3D G3DSA:3.40.50.1820 27 256 5.1E-15 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS10025 60222c93fbb6bdc71e7169ea35166c3f 354 Gene3D G3DSA:3.60.10.10 88 342 6.1E-10 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS10025 60222c93fbb6bdc71e7169ea35166c3f 354 SUPERFAMILY SSF56219 31 342 9.5E-30 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS10025 60222c93fbb6bdc71e7169ea35166c3f 354 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 86 295 1.1E-8 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 PANTHER PTHR12903 3 103 6.2E-39 T 20-04-2016 APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 SUPERFAMILY SSF50104 2 102 6.45E-33 T 20-04-2016 IPR008991 Translation protein SH3-like domain APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 SMART SM00739 5 32 1.9E-5 T 20-04-2016 IPR005824 KOW APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 20-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 Gene3D G3DSA:2.30.30.30 2 92 1.2E-24 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 98 20.773 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 103 8.3E-25 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 1.6E-35 T 20-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14000 894b14503d271caf3a5794b6a66dd143 103 Pfam PF00467 KOW motif 9 39 3.9E-8 T 20-04-2016 IPR005824 KOW APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 Gene3D G3DSA:3.30.250.10 272 327 1.1E-24 T 20-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 SUPERFAMILY SSF52540 8 271 8.5E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 SUPERFAMILY SSF54752 272 327 3.53E-19 T 20-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 ProSitePatterns PS00321 recA signature. 216 224 - T 20-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 8 327 4.8E-169 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 PRINTS PR00142 RecA protein signature 130 159 1.4E-81 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 PRINTS PR00142 RecA protein signature 213 241 1.4E-81 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 PRINTS PR00142 RecA protein signature 168 197 1.4E-81 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 PRINTS PR00142 RecA protein signature 96 125 1.4E-81 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 PRINTS PR00142 RecA protein signature 301 318 1.4E-81 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 PRINTS PR00142 RecA protein signature 247 276 1.4E-81 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 Gene3D G3DSA:3.40.50.300 37 271 1.9E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 PANTHER PTHR22942 1 339 2.6E-191 T 20-04-2016 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 PANTHER PTHR22942:SF1 1 339 2.6E-191 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 SMART SM00382 60 231 6.9E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 Hamap MF_00268 Protein RecA [recA]. 8 333 51.13 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS10570 f1b7f00bb4128e5191a70e14710b6deb 339 Pfam PF00154 recA bacterial DNA recombination protein 10 272 1.5E-141 T 20-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APS56_RS00500 a564a3611e886eca7d2adb9bf0127513 314 ProSitePatterns PS01058 SAICAR synthetase signature 2. 196 204 - T 20-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APS56_RS00500 a564a3611e886eca7d2adb9bf0127513 314 Pfam PF01259 SAICAR synthetase 16 256 2.1E-83 T 20-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APS56_RS00500 a564a3611e886eca7d2adb9bf0127513 314 SUPERFAMILY SSF56104 7 293 9.48E-90 T 20-04-2016 APS56_RS00500 a564a3611e886eca7d2adb9bf0127513 314 PANTHER PTHR11609 10 309 5.4E-86 T 20-04-2016 APS56_RS00500 a564a3611e886eca7d2adb9bf0127513 314 PANTHER PTHR11609:SF9 10 309 5.4E-86 T 20-04-2016 APS56_RS00500 a564a3611e886eca7d2adb9bf0127513 314 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 14 290 21.543 T 20-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APS56_RS00500 a564a3611e886eca7d2adb9bf0127513 314 Gene3D G3DSA:3.30.200.20 7 105 7.9E-37 T 20-04-2016 APS56_RS00500 a564a3611e886eca7d2adb9bf0127513 314 Gene3D G3DSA:3.30.470.20 106 237 8.5E-49 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 Pfam PF07715 TonB-dependent Receptor Plug Domain 98 204 4.6E-14 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 9 976 2.7E-204 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 PANTHER PTHR11532 504 974 4.2E-193 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 PANTHER PTHR11532 7 416 4.2E-193 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 180 210 1.6E-16 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 PANTHER PTHR11532:SF57 504 974 4.2E-193 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 PANTHER PTHR11532:SF57 7 416 4.2E-193 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 Gene3D G3DSA:2.170.130.10 99 213 1.3E-16 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 Gene3D G3DSA:2.60.40.1120 10 81 7.5E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 Pfam PF13715 CarboxypepD_reg-like domain 10 79 6.2E-10 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 SUPERFAMILY SSF49464 10 73 1.1E-9 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 SUPERFAMILY SSF56935 405 748 2.15E-56 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 SUPERFAMILY SSF56935 892 974 2.15E-56 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 SUPERFAMILY SSF56935 293 371 2.15E-56 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 SUPERFAMILY SSF56935 96 234 2.15E-56 T 20-04-2016 APS56_RS13730 2a32674f3090163d014de6327b5e03ed 976 SUPERFAMILY SSF56935 827 861 2.15E-56 T 20-04-2016 APS56_RS00070 8853c293e249fe45b916140fc4175207 736 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 736 0.0 T 20-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APS56_RS00070 8853c293e249fe45b916140fc4175207 736 Gene3D G3DSA:3.40.718.10 337 360 3.2E-34 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS00070 8853c293e249fe45b916140fc4175207 736 Gene3D G3DSA:3.40.718.10 144 285 3.2E-34 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS00070 8853c293e249fe45b916140fc4175207 736 Gene3D G3DSA:3.40.718.10 536 643 3.2E-34 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS00070 8853c293e249fe45b916140fc4175207 736 PANTHER PTHR36999 1 736 0.0 T 20-04-2016 APS56_RS00070 8853c293e249fe45b916140fc4175207 736 PIRSF PIRSF009407 1 736 0.0 T 20-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APS56_RS00070 8853c293e249fe45b916140fc4175207 736 SUPERFAMILY SSF53659 2 736 0.0 T 20-04-2016 APS56_RS00070 8853c293e249fe45b916140fc4175207 736 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 736 0.0 T 20-04-2016 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APS56_RS05865 e4b3dee1ff87627e4af8c1ebe670aa74 200 Pfam PF07661 MORN repeat variant 84 104 0.011 T 20-04-2016 IPR011652 MORN variant APS56_RS05865 e4b3dee1ff87627e4af8c1ebe670aa74 200 Pfam PF07661 MORN repeat variant 112 129 0.081 T 20-04-2016 IPR011652 MORN variant APS56_RS05865 e4b3dee1ff87627e4af8c1ebe670aa74 200 Pfam PF07661 MORN repeat variant 132 153 9.7E-4 T 20-04-2016 IPR011652 MORN variant APS56_RS05865 e4b3dee1ff87627e4af8c1ebe670aa74 200 Gene3D G3DSA:2.20.110.10 55 171 1.8E-13 T 20-04-2016 APS56_RS05865 e4b3dee1ff87627e4af8c1ebe670aa74 200 PANTHER PTHR33706 53 183 1.4E-21 T 20-04-2016 APS56_RS05865 e4b3dee1ff87627e4af8c1ebe670aa74 200 PANTHER PTHR33706:SF1 53 183 1.4E-21 T 20-04-2016 APS56_RS05865 e4b3dee1ff87627e4af8c1ebe670aa74 200 SUPERFAMILY SSF82185 54 177 1.83E-24 T 20-04-2016 APS56_RS13080 bad615e711ab77b02ed0751c7ff74248 223 PANTHER PTHR11735 2 140 2.8E-42 T 20-04-2016 APS56_RS13080 bad615e711ab77b02ed0751c7ff74248 223 Pfam PF00814 Glycoprotease family 36 145 2.0E-27 T 20-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS13080 bad615e711ab77b02ed0751c7ff74248 223 PANTHER PTHR11735:SF11 2 140 2.8E-42 T 20-04-2016 APS56_RS13080 bad615e711ab77b02ed0751c7ff74248 223 Gene3D G3DSA:3.30.420.40 3 131 2.2E-37 T 20-04-2016 APS56_RS13080 bad615e711ab77b02ed0751c7ff74248 223 SUPERFAMILY SSF53067 110 212 1.75E-13 T 20-04-2016 APS56_RS13080 bad615e711ab77b02ed0751c7ff74248 223 SUPERFAMILY SSF53067 3 104 1.21E-26 T 20-04-2016 APS56_RS13080 bad615e711ab77b02ed0751c7ff74248 223 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 214 1.5E-50 T 20-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 APS56_RS02660 0912f5f72bcc31490776454117a05947 263 Pfam PF13460 NAD(P)H-binding 8 185 8.2E-20 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02660 0912f5f72bcc31490776454117a05947 263 Gene3D G3DSA:3.40.50.720 1 210 4.1E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02660 0912f5f72bcc31490776454117a05947 263 PANTHER PTHR14194 3 214 4.4E-41 T 20-04-2016 APS56_RS02660 0912f5f72bcc31490776454117a05947 263 PANTHER PTHR14194:SF67 3 214 4.4E-41 T 20-04-2016 APS56_RS02660 0912f5f72bcc31490776454117a05947 263 SUPERFAMILY SSF51735 1 225 8.11E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Gene3D G3DSA:2.60.40.1120 25 113 3.1E-15 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 106 943 6.1E-156 T 20-04-2016 IPR010104 Bacterial TonB-dependent receptor APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 PANTHER PTHR30069 904 910 1.2E-50 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 PANTHER PTHR30069 7 364 1.2E-50 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 PANTHER PTHR30069 393 868 1.2E-50 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Pfam PF13715 CarboxypepD_reg-like domain 25 110 3.7E-19 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Pfam PF00593 TonB dependent receptor 679 942 9.5E-26 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Gene3D G3DSA:2.170.130.10 127 232 3.2E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 PANTHER PTHR30069:SF11 904 910 1.2E-50 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 PANTHER PTHR30069:SF11 7 364 1.2E-50 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 PANTHER PTHR30069:SF11 393 868 1.2E-50 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 SUPERFAMILY SSF56935 334 382 3.66E-92 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 SUPERFAMILY SSF56935 586 943 3.66E-92 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 SUPERFAMILY SSF56935 415 475 3.66E-92 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 SUPERFAMILY SSF56935 502 541 3.66E-92 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 SUPERFAMILY SSF56935 105 300 3.66E-92 T 20-04-2016 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Gene3D G3DSA:2.40.170.20 233 294 8.3E-64 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Gene3D G3DSA:2.40.170.20 407 567 8.3E-64 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Gene3D G3DSA:2.40.170.20 613 942 8.3E-64 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Gene3D G3DSA:2.40.170.20 333 373 8.3E-64 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 Pfam PF07715 TonB-dependent Receptor Plug Domain 127 230 1.4E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11925 0d865b642b5ebb8436c244b8d7a0152e 948 SUPERFAMILY SSF49464 22 109 5.49E-17 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 PANTHER PTHR11532 602 648 2.4E-163 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Pfam PF13715 CarboxypepD_reg-like domain 105 187 5.3E-14 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Gene3D G3DSA:2.40.170.20 409 489 6.1E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Gene3D G3DSA:2.40.170.20 522 865 6.1E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Gene3D G3DSA:2.40.170.20 326 353 6.1E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Gene3D G3DSA:2.40.170.20 987 1089 6.1E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Gene3D G3DSA:2.40.170.20 900 954 6.1E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 PANTHER PTHR11532 100 454 2.4E-163 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 298 328 9.6E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 SUPERFAMILY SSF49464 104 185 4.9E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 SMART SM00965 34 86 3.6E-4 T 20-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 PANTHER PTHR11532:SF57 667 1087 2.4E-163 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 PANTHER PTHR11532:SF57 484 548 2.4E-163 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 PANTHER PTHR11532:SF57 100 454 2.4E-163 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Pfam PF07660 Secretin and TonB N terminus short domain 42 86 4.1E-7 T 20-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Gene3D G3DSA:2.60.40.1120 105 190 1.6E-11 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Gene3D G3DSA:2.170.130.10 196 325 1.1E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 104 1089 6.8E-200 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 PANTHER PTHR11532:SF57 602 648 2.4E-163 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 PANTHER PTHR11532 667 1087 2.4E-163 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 PANTHER PTHR11532 484 548 2.4E-163 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 SUPERFAMILY SSF56935 1005 1089 4.35E-74 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 SUPERFAMILY SSF56935 918 964 4.35E-74 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 SUPERFAMILY SSF56935 400 488 4.35E-74 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 SUPERFAMILY SSF56935 527 863 4.35E-74 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 SUPERFAMILY SSF56935 183 346 4.35E-74 T 20-04-2016 APS56_RS01985 ebf4f9ef2b1ba9854820f9abce45bf9f 1089 Pfam PF07715 TonB-dependent Receptor Plug Domain 197 322 6.6E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS14530 aabdc0169f078114f8c11ce0caa731ff 460 PANTHER PTHR23408:SF15 1 418 1.2E-50 T 20-04-2016 APS56_RS14530 aabdc0169f078114f8c11ce0caa731ff 460 Pfam PF01642 Methylmalonyl-CoA mutase 40 427 2.6E-81 T 20-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 APS56_RS14530 aabdc0169f078114f8c11ce0caa731ff 460 PANTHER PTHR23408 1 418 1.2E-50 T 20-04-2016 APS56_RS14530 aabdc0169f078114f8c11ce0caa731ff 460 SUPERFAMILY SSF51703 3 420 3.4E-108 T 20-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 APS56_RS14530 aabdc0169f078114f8c11ce0caa731ff 460 Gene3D G3DSA:3.20.20.240 36 456 2.4E-96 T 20-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:1.10.287.130 818 878 2.3E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SUPERFAMILY SSF63829 39 194 1.37E-6 T 20-04-2016 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SUPERFAMILY SSF63829 219 423 2.35E-13 T 20-04-2016 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 939 1065 7.2E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SMART SM00448 1108 1220 1.4E-34 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SUPERFAMILY SSF52172 1106 1238 3.84E-35 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 PANTHER PTHR24423 815 1263 3.3E-111 T 20-04-2016 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 PANTHER PTHR24423 121 688 3.3E-111 T 20-04-2016 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF00072 Response regulator receiver domain 1110 1220 9.0E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1308 1350 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SMART SM00388 826 892 1.2E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:3.30.565.10 879 1065 3.9E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SMART SM00387 938 1066 1.8E-28 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SUPERFAMILY SSF55874 881 1068 7.86E-36 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SUPERFAMILY SSF46689 1307 1357 5.82E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1012 1022 1.7E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 994 1008 1.7E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1050 1063 1.7E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1026 1044 1.7E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:3.40.50.2300 1104 1232 3.8E-38 T 20-04-2016 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:1.10.10.60 1308 1356 1.2E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF00512 His Kinase A (phospho-acceptor) domain 827 892 4.6E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SMART SM00342 1271 1354 7.1E-30 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SUPERFAMILY SSF63829 399 645 8.5E-17 T 20-04-2016 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 SUPERFAMILY SSF47384 816 893 1.35E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF12833 Helix-turn-helix domain 1277 1355 3.5E-20 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:2.120.10.30 356 506 1.5E-11 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:2.120.10.30 537 642 4.3E-10 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:2.120.10.30 182 278 1.3E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:1.10.10.60 1253 1307 4.4E-10 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF07494 Two component regulator propeller 256 278 0.0049 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF07494 Two component regulator propeller 300 321 8.2E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF07494 Two component regulator propeller 81 103 2.7E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF07494 Two component regulator propeller 573 595 0.0021 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF07494 Two component regulator propeller 531 552 0.0012 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF07494 Two component regulator propeller 39 58 0.0016 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF07494 Two component regulator propeller 483 505 2.9E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Pfam PF07495 Y_Y_Y domain 708 771 6.1E-18 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 Gene3D G3DSA:2.120.10.30 41 117 4.0E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 PANTHER PTHR24423:SF487 815 1263 3.3E-111 T 20-04-2016 APS56_RS09985 670ea64bd5765925b4ee13c602c6b84d 1363 PANTHER PTHR24423:SF487 121 688 3.3E-111 T 20-04-2016 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 Gene3D G3DSA:3.40.1380.20 329 475 1.4E-37 T 20-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 Pfam PF00224 Pyruvate kinase, barrel domain 5 339 2.5E-117 T 20-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 361 472 1.8E-27 T 20-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 PANTHER PTHR11817 6 475 2.3E-190 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 217 229 - T 20-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 SUPERFAMILY SSF51621 4 77 7.42E-94 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 SUPERFAMILY SSF51621 158 342 7.42E-94 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 SUPERFAMILY SSF50800 73 167 3.66E-24 T 20-04-2016 IPR011037 Pyruvate kinase-like, insert domain APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 SUPERFAMILY SSF52935 327 475 1.44E-30 T 20-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 Gene3D G3DSA:2.40.33.10 76 168 2.5E-26 T 20-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 475 3.0E-156 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 PRINTS PR01050 Pyruvate kinase family signature 296 314 9.9E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 PRINTS PR01050 Pyruvate kinase family signature 62 78 9.9E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 PRINTS PR01050 Pyruvate kinase family signature 271 295 9.9E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 PRINTS PR01050 Pyruvate kinase family signature 219 245 9.9E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 PRINTS PR01050 Pyruvate kinase family signature 188 202 9.9E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 PRINTS PR01050 Pyruvate kinase family signature 246 270 9.9E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 PRINTS PR01050 Pyruvate kinase family signature 315 331 9.9E-62 T 20-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 Gene3D G3DSA:3.20.20.60 170 328 1.3E-95 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APS56_RS11435 2befed2f1633a9676ba9c592cb8b1bc7 480 Gene3D G3DSA:3.20.20.60 5 75 1.3E-95 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APS56_RS12225 30ef6caf4e8c4649c84ff9e5d71fef74 239 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 232 7.4E-64 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS12225 30ef6caf4e8c4649c84ff9e5d71fef74 239 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 238 14.839 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS12225 30ef6caf4e8c4649c84ff9e5d71fef74 239 PANTHER PTHR13767 10 236 8.4E-113 T 20-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS12225 30ef6caf4e8c4649c84ff9e5d71fef74 239 PANTHER PTHR13767:SF9 10 236 8.4E-113 T 20-04-2016 APS56_RS12225 30ef6caf4e8c4649c84ff9e5d71fef74 239 SUPERFAMILY SSF55120 10 235 9.28E-71 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS12225 30ef6caf4e8c4649c84ff9e5d71fef74 239 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 195 235 3.2E-10 T 20-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal APS56_RS12225 30ef6caf4e8c4649c84ff9e5d71fef74 239 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 37 194 8.6E-50 T 20-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APS56_RS00240 31ae01a64ab5a41cddb60daace2baea1 345 PIRSF PIRSF012641 1 345 1.7E-123 T 20-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase APS56_RS00240 31ae01a64ab5a41cddb60daace2baea1 345 Pfam PF15887 Putative zinc-binding metallo-peptidase 93 335 1.6E-97 T 20-04-2016 IPR031321 Uncharacterised conserved protein UCP012641, putative zinc-binding metallo-peptidase APS56_RS00240 31ae01a64ab5a41cddb60daace2baea1 345 Pfam PF10005 zinc-ribbon domain 3 87 4.2E-19 T 20-04-2016 IPR011201 Zinc-ribbon domain, bacteria APS56_RS01340 0eca9de0d37385524759ff1c319ecbda 141 SUPERFAMILY SSF54637 17 132 2.85E-27 T 20-04-2016 IPR029069 HotDog domain APS56_RS01340 0eca9de0d37385524759ff1c319ecbda 141 Pfam PF03061 Thioesterase superfamily 51 126 7.9E-11 T 20-04-2016 IPR006683 Thioesterase domain APS56_RS01340 0eca9de0d37385524759ff1c319ecbda 141 Gene3D G3DSA:3.10.129.10 4 135 3.5E-41 T 20-04-2016 IPR029069 HotDog domain APS56_RS01340 0eca9de0d37385524759ff1c319ecbda 141 PANTHER PTHR12418 17 132 3.2E-41 T 20-04-2016 APS56_RS01340 0eca9de0d37385524759ff1c319ecbda 141 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 134 1.1E-29 T 20-04-2016 IPR003736 Phenylacetic acid degradation-related domain APS56_RS01340 0eca9de0d37385524759ff1c319ecbda 141 PANTHER PTHR12418:SF33 17 132 3.2E-41 T 20-04-2016 APS56_RS04170 d4e15227fc5677a7ce0d9c13e191b7a7 136 Gene3D G3DSA:3.30.420.140 2 135 5.9E-38 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APS56_RS04170 d4e15227fc5677a7ce0d9c13e191b7a7 136 PANTHER PTHR33317 3 133 3.5E-28 T 20-04-2016 APS56_RS04170 d4e15227fc5677a7ce0d9c13e191b7a7 136 Pfam PF03652 Holliday junction resolvase 3 134 2.1E-36 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APS56_RS04170 d4e15227fc5677a7ce0d9c13e191b7a7 136 SMART SM00732 2 100 1.7E-15 T 20-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APS56_RS04170 d4e15227fc5677a7ce0d9c13e191b7a7 136 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 133 1.1E-20 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APS56_RS04170 d4e15227fc5677a7ce0d9c13e191b7a7 136 PANTHER PTHR33317:SF1 3 133 3.5E-28 T 20-04-2016 APS56_RS04170 d4e15227fc5677a7ce0d9c13e191b7a7 136 SUPERFAMILY SSF53098 2 134 2.28E-34 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS04170 d4e15227fc5677a7ce0d9c13e191b7a7 136 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 136 18.705 T 20-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 438 33.5 T 20-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 Gene3D G3DSA:1.20.120.140 2 89 9.4E-31 T 20-04-2016 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 Pfam PF02978 Signal peptide binding domain 326 423 7.2E-35 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 SUPERFAMILY SSF47446 326 426 6.54E-37 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 PANTHER PTHR11564 1 430 5.1E-251 T 20-04-2016 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 425 2.2E-184 T 20-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 SMART SM00963 1 86 1.1E-28 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 Gene3D G3DSA:1.10.260.30 326 427 7.4E-40 T 20-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 SMART SM00382 98 300 8.8E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 Gene3D G3DSA:3.40.50.300 97 296 1.7E-75 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 Pfam PF00448 SRP54-type protein, GTPase domain 99 295 1.7E-74 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 SMART SM00962 99 295 2.8E-113 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 SUPERFAMILY SSF52540 42 353 2.92E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 PANTHER PTHR11564:SF7 1 430 5.1E-251 T 20-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APS56_RS14165 b4f0263c099551c5ffda37d89ad4c718 442 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 1.4E-19 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS04740 8f0b21d1aeecdd126a5f19e8d80ea258 112 Gene3D G3DSA:2.40.50.140 3 111 5.2E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS04740 8f0b21d1aeecdd126a5f19e8d80ea258 112 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 108 6.1E-38 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS04740 8f0b21d1aeecdd126a5f19e8d80ea258 112 PANTHER PTHR10302 6 110 7.1E-37 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS04740 8f0b21d1aeecdd126a5f19e8d80ea258 112 PIRSF PIRSF002070 1 112 1.4E-35 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS04740 8f0b21d1aeecdd126a5f19e8d80ea258 112 SUPERFAMILY SSF50249 6 111 8.57E-37 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS04740 8f0b21d1aeecdd126a5f19e8d80ea258 112 Pfam PF00436 Single-strand binding protein family 6 107 6.5E-35 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APS56_RS04740 8f0b21d1aeecdd126a5f19e8d80ea258 112 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 28.561 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS15275 b99975795e54c651489c273144ddd29c 182 SUPERFAMILY SSF54637 6 159 7.31E-45 T 20-04-2016 IPR029069 HotDog domain APS56_RS15275 b99975795e54c651489c273144ddd29c 182 Pfam PF03061 Thioesterase superfamily 28 101 1.1E-19 T 20-04-2016 IPR006683 Thioesterase domain APS56_RS15275 b99975795e54c651489c273144ddd29c 182 Gene3D G3DSA:3.10.129.10 6 159 9.2E-57 T 20-04-2016 IPR029069 HotDog domain APS56_RS15275 b99975795e54c651489c273144ddd29c 182 PANTHER PTHR11049 7 154 3.7E-60 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF12833 Helix-turn-helix domain 1266 1344 1.2E-16 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SUPERFAMILY SSF52172 1097 1219 4.84E-35 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1297 1339 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1021 1039 1.5E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1045 1058 1.5E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1005 1015 1.5E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 987 1001 1.5E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:1.10.10.60 1297 1341 1.8E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SMART SM00387 947 1061 5.9E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:3.30.565.10 888 1061 2.6E-39 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SUPERFAMILY SSF46689 1296 1342 2.69E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SMART SM00448 1098 1210 5.5E-36 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 834 901 1.1E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF07495 Y_Y_Y domain 715 778 4.7E-14 T 20-04-2016 IPR011123 Two component regulator three Y APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423 125 171 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423 831 1252 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423 633 673 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423 1 75 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423 535 594 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423 720 738 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SMART SM00342 1260 1343 6.0E-21 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SMART SM00388 833 901 7.3E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SUPERFAMILY SSF47384 824 902 1.47E-16 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:3.40.50.2300 1097 1221 6.1E-39 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF00072 Response regulator receiver domain 1100 1210 7.3E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 949 1059 1.3E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:1.10.287.130 829 887 1.0E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SUPERFAMILY SSF63829 411 620 1.24E-10 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SUPERFAMILY SSF55874 890 1059 1.44E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:1.10.10.60 1243 1296 2.7E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:2.120.10.30 474 562 4.3E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:2.120.10.30 84 152 1.2E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:2.120.10.30 415 434 4.3E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Gene3D G3DSA:2.120.10.30 188 217 1.2E-6 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 SUPERFAMILY SSF63829 84 341 2.4E-15 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423:SF487 125 171 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423:SF487 831 1252 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423:SF487 633 673 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423:SF487 1 75 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423:SF487 535 594 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 PANTHER PTHR24423:SF487 720 738 3.3E-126 T 20-04-2016 APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF07494 Two component regulator propeller 126 149 7.1E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF07494 Two component regulator propeller 533 555 0.017 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF07494 Two component regulator propeller 318 340 0.017 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS10050 54a0dfb383da4412b9acb1cd43bd17f2 1344 Pfam PF07494 Two component regulator propeller 33 55 1.3E-4 T 20-04-2016 IPR011110 Two component regulator propeller APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 350 356 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 Gene3D G3DSA:3.40.50.1000 466 609 1.5E-42 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 Gene3D G3DSA:3.40.50.1000 321 364 1.5E-42 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 Pfam PF00702 haloacid dehalogenase-like hydrolase 344 554 5.4E-30 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 SUPERFAMILY SSF81653 149 246 8.11E-20 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 98 644 2.6E-153 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 120 620 6.6E-73 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 Pfam PF00122 E1-E2 ATPase 118 338 1.3E-54 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 Gene3D G3DSA:2.70.150.10 97 247 4.2E-23 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 99 643 3.4E-164 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PANTHER PTHR24093 10 646 1.1E-240 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PANTHER PTHR24093:SF210 10 646 1.1E-240 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 SUPERFAMILY SSF56784 402 640 1.29E-50 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 SUPERFAMILY SSF56784 346 366 1.29E-50 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00941 Cadmium-transporting ATPase signature 76 88 5.7E-12 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00941 Cadmium-transporting ATPase signature 151 167 5.7E-12 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00941 Cadmium-transporting ATPase signature 231 245 5.7E-12 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00941 Cadmium-transporting ATPase signature 131 151 5.7E-12 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00941 Cadmium-transporting ATPase signature 212 228 5.7E-12 T 20-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 Gene3D G3DSA:3.40.1110.10 367 465 2.3E-8 T 20-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 SUPERFAMILY SSF81665 98 150 1.11E-9 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 SUPERFAMILY SSF81665 247 341 1.11E-9 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 348 362 1.9E-17 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 486 496 1.9E-17 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 196 210 1.9E-17 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 559 1.9E-17 T 20-04-2016 APS56_RS01465 67cfdb5fd53c3f1662b9c0471667cdd9 649 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 564 576 1.9E-17 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 SUPERFAMILY SSF49464 12 93 6.93E-21 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 SUPERFAMILY SSF56935 309 397 2.89E-78 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 SUPERFAMILY SSF56935 829 872 2.89E-78 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 SUPERFAMILY SSF56935 428 768 2.89E-78 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 SUPERFAMILY SSF56935 928 985 2.89E-78 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 SUPERFAMILY SSF56935 91 237 2.89E-78 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 Pfam PF13715 CarboxypepD_reg-like domain 14 95 1.2E-18 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 Gene3D G3DSA:2.170.130.10 98 211 7.5E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 Gene3D G3DSA:2.40.170.20 837 862 1.5E-38 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 Gene3D G3DSA:2.40.170.20 928 1017 1.5E-38 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 Gene3D G3DSA:2.40.170.20 318 780 1.5E-38 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 Gene3D G3DSA:2.40.170.20 212 235 1.5E-38 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 Pfam PF07715 TonB-dependent Receptor Plug Domain 104 211 1.2E-16 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 Gene3D G3DSA:2.60.40.1120 13 97 7.6E-16 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 PANTHER PTHR11532 378 809 5.3E-128 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 PANTHER PTHR11532 13 359 5.3E-128 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 PANTHER PTHR11532 827 1015 5.3E-128 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 12 1017 5.0E-177 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 PANTHER PTHR11532:SF51 378 809 5.3E-128 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 PANTHER PTHR11532:SF51 13 359 5.3E-128 T 20-04-2016 APS56_RS08935 e331a8fdd07c0978dee0025bfd3274e4 1017 PANTHER PTHR11532:SF51 827 1015 5.3E-128 T 20-04-2016 APS56_RS14710 3c2340dd980cbcdfd1d3cb13586fe002 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 5 329 5.2E-80 T 20-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APS56_RS14710 3c2340dd980cbcdfd1d3cb13586fe002 335 SUPERFAMILY SSF52540 39 189 7.02E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14710 3c2340dd980cbcdfd1d3cb13586fe002 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 15 322 1.9E-48 T 20-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APS56_RS14710 3c2340dd980cbcdfd1d3cb13586fe002 335 PANTHER PTHR30160 3 329 3.6E-71 T 20-04-2016 APS56_RS14710 3c2340dd980cbcdfd1d3cb13586fe002 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 2 333 25.392 T 20-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APS56_RS14710 3c2340dd980cbcdfd1d3cb13586fe002 335 PANTHER PTHR30160:SF13 3 329 3.6E-71 T 20-04-2016 APS56_RS05605 ca1bf04d46283569c1927479556e53ec 64 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 4 54 1.4E-15 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS05605 ca1bf04d46283569c1927479556e53ec 64 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 20-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS05605 ca1bf04d46283569c1927479556e53ec 64 Pfam PF01165 Ribosomal protein S21 4 54 1.7E-14 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS05605 ca1bf04d46283569c1927479556e53ec 64 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 17.47 T 20-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 Gene3D G3DSA:3.30.230.40 188 275 3.3E-36 T 20-04-2016 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 PANTHER PTHR23133 9 97 1.2E-135 T 20-04-2016 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 PANTHER PTHR23133 184 378 1.2E-135 T 20-04-2016 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 Gene3D G3DSA:3.30.230.40 279 378 8.3E-28 T 20-04-2016 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 146 9.4E-18 T 20-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 SUPERFAMILY SSF54211 274 362 7.97E-29 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 340 352 - T 20-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 217 358 2.0E-58 T 20-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 145 5.6E-28 T 20-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 2 150 9.3E-52 T 20-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 SUPERFAMILY SSF56784 1 148 1.95E-29 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 Gene3D G3DSA:3.40.50.1000 1 153 1.6E-31 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 188 378 35.02 T 20-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 SUPERFAMILY SSF54211 188 271 1.77E-30 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 PANTHER PTHR23133:SF2 9 97 1.2E-135 T 20-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 PANTHER PTHR23133:SF2 184 378 1.2E-135 T 20-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APS56_RS01935 a342ed97f6a14606a07c97bf55d3489e 378 Pfam PF08645 Polynucleotide kinase 3 phosphatase 3 120 5.8E-5 T 20-04-2016 IPR013954 Polynucleotide kinase 3 phosphatase APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 SUPERFAMILY SSF109998 58 223 6.28E-22 T 20-04-2016 IPR027304 Trigger factor/SurA domain APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 Pfam PF00639 PPIC-type PPIASE domain 317 408 1.3E-12 T 20-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 Pfam PF00639 PPIC-type PPIASE domain 218 306 2.4E-14 T 20-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 PANTHER PTHR10657 61 354 2.9E-19 T 20-04-2016 APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 SUPERFAMILY SSF54534 204 309 7.2E-18 T 20-04-2016 APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 SUPERFAMILY SSF54534 310 425 3.47E-15 T 20-04-2016 APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 PANTHER PTHR10657:SF11 61 354 2.9E-19 T 20-04-2016 APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 Gene3D G3DSA:3.10.50.40 205 310 5.9E-19 T 20-04-2016 APS56_RS16600 bc9069ace430c75d1b1365b3e87ef785 483 Gene3D G3DSA:3.10.50.40 311 448 5.5E-24 T 20-04-2016 APS56_RS07420 f1555484f3b5834a3778f7f9f116451c 146 Pfam PF02082 Transcriptional regulator 1 81 2.1E-22 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APS56_RS07420 f1555484f3b5834a3778f7f9f116451c 146 PANTHER PTHR33221 1 134 1.9E-44 T 20-04-2016 APS56_RS07420 f1555484f3b5834a3778f7f9f116451c 146 Gene3D G3DSA:1.10.10.10 1 136 2.5E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07420 f1555484f3b5834a3778f7f9f116451c 146 PANTHER PTHR33221:SF1 1 134 1.9E-44 T 20-04-2016 APS56_RS07420 f1555484f3b5834a3778f7f9f116451c 146 SUPERFAMILY SSF46785 1 135 1.97E-30 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07420 f1555484f3b5834a3778f7f9f116451c 146 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 134 5.8E-33 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APS56_RS09505 6a89af2b6bf21bc9059e5355ea19c2b5 419 PANTHER PTHR21499 3 353 2.7E-67 T 20-04-2016 APS56_RS09505 6a89af2b6bf21bc9059e5355ea19c2b5 419 SUPERFAMILY SSF53633 1 291 1.31E-68 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS09505 6a89af2b6bf21bc9059e5355ea19c2b5 419 SUPERFAMILY SSF55021 296 384 7.32E-8 T 20-04-2016 APS56_RS09505 6a89af2b6bf21bc9059e5355ea19c2b5 419 Gene3D G3DSA:3.40.1160.10 106 291 1.1E-49 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS09505 6a89af2b6bf21bc9059e5355ea19c2b5 419 Gene3D G3DSA:3.40.1160.10 1 48 1.1E-49 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS09505 6a89af2b6bf21bc9059e5355ea19c2b5 419 Pfam PF00696 Amino acid kinase family 3 277 1.9E-42 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS09505 6a89af2b6bf21bc9059e5355ea19c2b5 419 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 384 2.8E-75 T 20-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS09505 6a89af2b6bf21bc9059e5355ea19c2b5 419 PANTHER PTHR21499:SF3 3 353 2.7E-67 T 20-04-2016 APS56_RS00225 3641b6672ae0722728c220542ece1fb1 401 Gene3D G3DSA:1.20.1250.20 209 396 1.7E-4 T 20-04-2016 APS56_RS00225 3641b6672ae0722728c220542ece1fb1 401 Gene3D G3DSA:1.20.1250.20 13 195 1.8E-27 T 20-04-2016 APS56_RS00225 3641b6672ae0722728c220542ece1fb1 401 SUPERFAMILY SSF103473 4 397 1.83E-51 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS00225 3641b6672ae0722728c220542ece1fb1 401 Pfam PF07690 Major Facilitator Superfamily 19 356 4.1E-37 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS00225 3641b6672ae0722728c220542ece1fb1 401 PANTHER PTHR23502 8 392 1.7E-94 T 20-04-2016 APS56_RS00225 3641b6672ae0722728c220542ece1fb1 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APS56_RS00225 3641b6672ae0722728c220542ece1fb1 401 PANTHER PTHR23502:SF19 8 392 1.7E-94 T 20-04-2016 APS56_RS00225 3641b6672ae0722728c220542ece1fb1 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 392 7.0E-65 T 20-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APS56_RS07280 1314ed7e1e065aa79ba45ccc80e11237 108 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 23 100 5.8E-18 T 20-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APS56_RS07280 1314ed7e1e065aa79ba45ccc80e11237 108 PANTHER PTHR14552 1 107 8.9E-32 T 20-04-2016 APS56_RS07280 1314ed7e1e065aa79ba45ccc80e11237 108 Gene3D G3DSA:1.10.287.1080 1 92 1.6E-25 T 20-04-2016 APS56_RS07280 1314ed7e1e065aa79ba45ccc80e11237 108 SUPERFAMILY SSF101386 1 100 2.13E-27 T 20-04-2016 APS56_RS07280 1314ed7e1e065aa79ba45ccc80e11237 108 PIRSF PIRSF029904 1 108 7.0E-46 T 20-04-2016 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD APS56_RS07280 1314ed7e1e065aa79ba45ccc80e11237 108 PANTHER PTHR14552:SF13 1 107 8.9E-32 T 20-04-2016 APS56_RS15330 5d9a25009dae317bac379662acafdb03 239 Gene3D G3DSA:3.90.1490.10 148 214 4.1E-18 T 20-04-2016 APS56_RS15330 5d9a25009dae317bac379662acafdb03 239 PIRSF PIRSF039123 3 229 7.1E-61 T 20-04-2016 IPR030662 Diphthine--ammonia ligase/Uncharacterised protein MJ0570 MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 APS56_RS15330 5d9a25009dae317bac379662acafdb03 239 Gene3D G3DSA:3.40.50.620 2 146 6.1E-27 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS15330 5d9a25009dae317bac379662acafdb03 239 PANTHER PTHR12196 122 201 7.4E-12 T 20-04-2016 IPR030662 Diphthine--ammonia ligase/Uncharacterised protein MJ0570 MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 APS56_RS15330 5d9a25009dae317bac379662acafdb03 239 Pfam PF01902 Diphthamide synthase 9 204 8.9E-35 T 20-04-2016 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|UniPathway: UPA00559 APS56_RS15330 5d9a25009dae317bac379662acafdb03 239 SUPERFAMILY SSF52402 1 213 2.3E-59 T 20-04-2016 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 PANTHER PTHR24423 2 17 8.8E-34 T 20-04-2016 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 Gene3D G3DSA:1.25.40.10 194 248 1.4E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 Gene3D G3DSA:1.25.40.10 285 327 1.4E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 Gene3D G3DSA:1.25.40.10 75 193 5.0E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 PANTHER PTHR24423:SF468 2 17 8.8E-34 T 20-04-2016 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 SMART SM00387 504 602 8.2E-9 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 PANTHER PTHR24423 344 359 8.8E-34 T 20-04-2016 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 SUPERFAMILY SSF55874 483 599 2.23E-15 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 PANTHER PTHR24423:SF468 344 359 8.8E-34 T 20-04-2016 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 598 6.3E-7 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 Pfam PF13424 Tetratricopeptide repeat 137 208 6.3E-12 T 20-04-2016 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 PANTHER PTHR24423:SF468 396 599 8.8E-34 T 20-04-2016 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 PANTHER PTHR24423 396 599 8.8E-34 T 20-04-2016 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 Gene3D G3DSA:3.30.565.10 472 599 6.5E-13 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 SMART SM00028 178 211 35.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 SMART SM00028 285 318 290.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 SMART SM00028 138 171 0.014 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 SMART SM00028 215 248 1.1E-4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 SMART SM00028 98 132 270.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 SUPERFAMILY SSF48452 74 258 2.71E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 Pfam PF07568 Histidine kinase 408 483 3.2E-26 T 20-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain APS56_RS13285 74d2ac9d82e7247a7e4da78641b7d729 604 Pfam PF13181 Tetratricopeptide repeat 217 244 2.2E-4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 179 28.989 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 Gene3D G3DSA:3.40.50.1470 2 187 1.1E-62 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 PANTHER PTHR17224:SF1 1 186 2.3E-62 T 20-04-2016 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 SUPERFAMILY SSF53178 4 186 3.53E-55 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 Pfam PF01195 Peptidyl-tRNA hydrolase 5 184 3.3E-52 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 108 118 - T 20-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 20-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 PANTHER PTHR17224 1 186 2.3E-62 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APS56_RS09605 513a89ea9f963f46e269da8ba50eba3f 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 186 2.2E-53 T 20-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 Pfam PF01580 FtsK/SpoIIIE family 411 614 2.0E-48 T 20-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 SUPERFAMILY SSF46785 714 776 5.3E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 PANTHER PTHR22683 232 775 2.4E-181 T 20-04-2016 APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 Pfam PF09397 Ftsk gamma domain 715 776 2.7E-26 T 20-04-2016 IPR018541 FtsK gamma domain APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 SUPERFAMILY SSF52540 382 683 6.11E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 Gene3D G3DSA:3.40.50.300 384 678 5.4E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 SMART SM00843 713 778 1.8E-30 T 20-04-2016 IPR018541 FtsK gamma domain APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 PANTHER PTHR22683:SF41 232 775 2.4E-181 T 20-04-2016 APS56_RS02440 45035040ac984286cfd273bb5f91ec08 790 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 185 1.0E-19 T 20-04-2016 IPR025199 DNA translocase FtsK, 4TM region APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 SUPERFAMILY SSF52540 307 525 1.22E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 Pfam PF00005 ABC transporter 344 473 1.6E-20 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 Pfam PF00005 ABC transporter 18 192 4.3E-26 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 SMART SM00382 352 518 5.6E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 SMART SM00382 26 244 8.5E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 Pfam PF12848 ABC transporter 231 312 2.2E-22 T 20-04-2016 IPR032781 ABC-transporter extension domain APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 PANTHER PTHR19211:SF60 1 530 1.8E-293 T 20-04-2016 APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 PANTHER PTHR19211 1 530 1.8E-293 T 20-04-2016 APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 Gene3D G3DSA:3.40.50.300 1 88 9.3E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 Gene3D G3DSA:3.40.50.300 129 277 9.3E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 Gene3D G3DSA:3.40.50.300 329 530 2.0E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 SUPERFAMILY SSF52540 2 92 6.16E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15380 6c42833f5a0ef9e9c9d93db2ca7631be 545 SUPERFAMILY SSF52540 133 263 6.16E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 346 1.7E-117 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 352 44.166 T 20-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 346 2.0E-131 T 20-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 PANTHER PTHR11835:SF35 2 352 7.2E-169 T 20-04-2016 APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 241 260 - T 20-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 SUPERFAMILY SSF53659 1 352 1.02E-111 T 20-04-2016 APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 SMART SM01329 4 348 2.9E-173 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 Gene3D G3DSA:3.40.718.10 2 352 1.6E-118 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS01900 3173126dafab01c7cbeece64dabdc563 352 PANTHER PTHR11835 2 352 7.2E-169 T 20-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 236 495 2.1E-57 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 SUPERFAMILY SSF53613 231 500 6.2E-65 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 Gene3D G3DSA:3.40.50.10260 2 238 1.2E-53 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 228 502 21.376 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 PANTHER PTHR12592 1 506 4.4E-107 T 20-04-2016 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 Pfam PF03853 YjeF-related protein N-terminus 25 190 6.2E-37 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 437 447 - T 20-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 SUPERFAMILY SSF64153 10 221 4.45E-52 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 Pfam PF01256 Carbohydrate kinase 252 492 1.7E-50 T 20-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 213 20.592 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 PIRSF PIRSF017184 1 505 4.4E-148 T 20-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 Gene3D G3DSA:3.40.1190.20 239 510 2.1E-74 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 PANTHER PTHR12592:SF0 1 506 4.4E-107 T 20-04-2016 APS56_RS03570 92f1798e51ffebd46a513c7e3d1d09c1 521 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 213 4.1E-33 T 20-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APS56_RS00200 7de51a9b747ee652862769f3547de4c2 361 SUPERFAMILY SSF56801 59 351 6.28E-40 T 20-04-2016 APS56_RS00200 7de51a9b747ee652862769f3547de4c2 361 Pfam PF00501 AMP-binding enzyme 60 204 3.0E-15 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APS56_RS00200 7de51a9b747ee652862769f3547de4c2 361 Gene3D G3DSA:3.30.300.30 264 351 2.8E-5 T 20-04-2016 APS56_RS00200 7de51a9b747ee652862769f3547de4c2 361 Gene3D G3DSA:3.40.50.980 60 202 1.4E-16 T 20-04-2016 APS56_RS00200 7de51a9b747ee652862769f3547de4c2 361 PANTHER PTHR24096 60 351 3.7E-18 T 20-04-2016 APS56_RS00200 7de51a9b747ee652862769f3547de4c2 361 PANTHER PTHR24096:SF179 60 351 3.7E-18 T 20-04-2016 APS56_RS05255 d66a678c409d0f09af4b6b8d940ee438 511 Gene3D G3DSA:3.90.550.10 200 407 1.6E-29 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05255 d66a678c409d0f09af4b6b8d940ee438 511 Pfam PF00535 Glycosyl transferase family 2 203 310 5.3E-14 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS05255 d66a678c409d0f09af4b6b8d940ee438 511 PANTHER PTHR22916 151 396 4.8E-20 T 20-04-2016 APS56_RS05255 d66a678c409d0f09af4b6b8d940ee438 511 SUPERFAMILY SSF53448 195 422 3.0E-29 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 Gene3D G3DSA:2.40.170.20 326 791 1.8E-13 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 PANTHER PTHR11532:SF57 427 490 6.7E-171 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 PANTHER PTHR11532:SF57 526 553 6.7E-171 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 PANTHER PTHR11532:SF57 6 377 6.7E-171 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 PANTHER PTHR11532:SF57 582 1035 6.7E-171 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 Gene3D G3DSA:2.170.130.10 128 242 4.0E-11 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 SUPERFAMILY SSF56935 449 791 2.43E-49 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 SUPERFAMILY SSF56935 323 411 2.43E-49 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 SUPERFAMILY SSF56935 953 1011 2.43E-49 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 SUPERFAMILY SSF56935 141 263 2.43E-49 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 SUPERFAMILY SSF56935 871 915 2.43E-49 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 SUPERFAMILY SSF49464 29 98 4.58E-10 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 PANTHER PTHR11532 427 490 6.7E-171 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 PANTHER PTHR11532 526 553 6.7E-171 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 PANTHER PTHR11532 6 377 6.7E-171 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 PANTHER PTHR11532 582 1035 6.7E-171 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 Pfam PF07715 TonB-dependent Receptor Plug Domain 128 239 1.3E-11 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 Pfam PF13715 CarboxypepD_reg-like domain 31 98 3.2E-10 T 20-04-2016 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 30 1035 6.4E-199 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS06150 38a4d450e69783827cfa7ea77c4e1229 1037 Gene3D G3DSA:2.60.40.1120 31 91 1.7E-7 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS14130 4712e210f3a92fce46681e4ddc03d382 243 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 2 230 1.3E-48 T 20-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APS56_RS14130 4712e210f3a92fce46681e4ddc03d382 243 SUPERFAMILY SSF55681 2 192 4.47E-43 T 20-04-2016 APS56_RS14130 4712e210f3a92fce46681e4ddc03d382 243 Pfam PF03099 Biotin/lipoate A/B protein ligase family 8 133 9.2E-18 T 20-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APS56_RS14130 4712e210f3a92fce46681e4ddc03d382 243 PANTHER PTHR12835 1 242 9.6E-43 T 20-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APS56_RS14130 4712e210f3a92fce46681e4ddc03d382 243 Gene3D G3DSA:3.30.930.10 2 191 3.9E-45 T 20-04-2016 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 SUPERFAMILY SSF51338 389 419 2.5E-9 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 Gene3D G3DSA:2.30.40.10 33 91 2.1E-14 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 Gene3D G3DSA:2.30.40.10 398 428 2.1E-14 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 SUPERFAMILY SSF51338 556 623 2.16E-23 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 SUPERFAMILY SSF51338 905 950 2.16E-23 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 PANTHER PTHR11271 535 966 7.6E-39 T 20-04-2016 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 Gene3D G3DSA:2.30.40.10 328 397 3.6E-21 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 Gene3D G3DSA:3.20.20.140 630 938 5.7E-29 T 20-04-2016 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 Gene3D G3DSA:2.30.40.10 570 629 1.4E-18 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 SUPERFAMILY SSF51338 33 89 2.5E-9 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 PANTHER PTHR11271:SF39 535 966 7.6E-39 T 20-04-2016 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 Pfam PF01979 Amidohydrolase family 331 422 4.0E-5 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 Pfam PF01979 Amidohydrolase family 847 928 3.6E-12 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APS56_RS15455 ecb6f13f7b12ba7c108e64b51d038bea 994 SUPERFAMILY SSF51556 623 906 8.85E-23 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS10410 3ea528154a6c65d31302acd0cd3f044d 357 PANTHER PTHR11228 19 315 2.5E-73 T 20-04-2016 APS56_RS10410 3ea528154a6c65d31302acd0cd3f044d 357 SMART SM00729 68 292 0.0029 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS10410 3ea528154a6c65d31302acd0cd3f044d 357 Gene3D G3DSA:3.20.20.70 76 264 1.2E-11 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS10410 3ea528154a6c65d31302acd0cd3f044d 357 Pfam PF04055 Radical SAM superfamily 73 250 1.3E-14 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS10410 3ea528154a6c65d31302acd0cd3f044d 357 PANTHER PTHR11228:SF26 19 315 2.5E-73 T 20-04-2016 APS56_RS10410 3ea528154a6c65d31302acd0cd3f044d 357 SUPERFAMILY SSF102114 65 260 1.83E-15 T 20-04-2016 APS56_RS01965 05bf06e4deb2e8d5d79a8a7812b5bcad 486 Gene3D G3DSA:2.120.10.80 225 400 5.2E-6 T 20-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 APS56_RS01965 05bf06e4deb2e8d5d79a8a7812b5bcad 486 SUPERFAMILY SSF89372 248 445 1.7E-5 T 20-04-2016 APS56_RS03185 1bcccb34634cafde3f4332d818e07d60 542 PANTHER PTHR22855 4 542 2.0E-257 T 20-04-2016 APS56_RS03185 1bcccb34634cafde3f4332d818e07d60 542 PANTHER PTHR22855:SF13 4 542 2.0E-257 T 20-04-2016 APS56_RS03185 1bcccb34634cafde3f4332d818e07d60 542 Pfam PF01039 Carboxyl transferase domain 37 531 1.7E-143 T 20-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS03185 1bcccb34634cafde3f4332d818e07d60 542 Gene3D G3DSA:3.90.226.10 272 533 2.7E-83 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS03185 1bcccb34634cafde3f4332d818e07d60 542 Gene3D G3DSA:3.90.226.10 18 256 3.9E-64 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS03185 1bcccb34634cafde3f4332d818e07d60 542 SUPERFAMILY SSF52096 14 257 7.97E-60 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS03185 1bcccb34634cafde3f4332d818e07d60 542 SUPERFAMILY SSF52096 272 532 1.45E-78 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 SUPERFAMILY SSF53067 4 182 1.78E-63 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 SUPERFAMILY SSF53067 184 376 3.11E-65 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Gene3D G3DSA:1.20.1270.10 526 597 3.8E-18 T 20-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 190 203 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 SUPERFAMILY SSF100934 501 595 2.22E-12 T 20-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PANTHER PTHR19375 2 635 0.0 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Gene3D G3DSA:3.30.30.30 53 104 2.4E-18 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Gene3D G3DSA:3.30.420.40 117 189 2.9E-61 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Gene3D G3DSA:3.30.420.40 4 52 2.9E-61 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Gene3D G3DSA:3.30.420.40 190 223 3.6E-36 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Gene3D G3DSA:3.30.420.40 313 355 3.6E-36 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 SUPERFAMILY SSF100920 378 533 1.57E-59 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Pfam PF00012 Hsp70 protein 4 597 5.1E-252 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PANTHER PTHR19375:SF173 2 635 0.0 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Gene3D G3DSA:3.90.640.10 224 309 8.3E-29 T 20-04-2016 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Gene3D G3DSA:2.60.34.10 384 525 1.6E-67 T 20-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 3 16 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 31 43 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 136 156 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 196 206 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 463 479 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 54 62 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 328 344 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 359 379 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 PRINTS PR00301 70kDa heat shock protein signature 382 401 5.0E-77 T 20-04-2016 IPR013126 Heat shock protein 70 family APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 597 2.4E-290 T 20-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 331 345 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 20-04-2016 IPR018181 Heat shock protein 70, conserved site APS56_RS16225 c5cd26d3e58398c02226bf9d8003f57b 635 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 36.495 T 20-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 SMART SM00116 143 196 2.1 T 20-04-2016 IPR000644 CBS domain APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 SMART SM00116 207 255 0.016 T 20-04-2016 IPR000644 CBS domain APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 Gene3D G3DSA:3.10.580.10 128 261 7.6E-23 T 20-04-2016 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 PANTHER PTHR11911:SF23 108 422 7.6E-35 T 20-04-2016 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 SUPERFAMILY SSF161093 276 448 2.62E-44 T 20-04-2016 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 Pfam PF03448 MgtE intracellular N domain 33 134 1.2E-24 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 SUPERFAMILY SSF158791 6 133 2.35E-29 T 20-04-2016 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 Gene3D G3DSA:1.10.357.20 277 449 1.6E-47 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 SUPERFAMILY SSF54631 136 269 5.31E-29 T 20-04-2016 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 Pfam PF01769 Divalent cation transporter 320 443 4.5E-27 T 20-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 SMART SM00924 32 136 1.1E-29 T 20-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 PANTHER PTHR11911 108 422 7.6E-35 T 20-04-2016 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 TIGRFAM TIGR00400 mgtE: magnesium transporter 7 449 5.2E-104 T 20-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 Gene3D G3DSA:1.25.60.10 3 127 1.3E-30 T 20-04-2016 APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 Pfam PF00571 CBS domain 206 255 2.3E-5 T 20-04-2016 IPR000644 CBS domain APS56_RS09560 4871499daa74983026c0c09ec5c93c25 450 Pfam PF00571 CBS domain 137 194 2.3E-8 T 20-04-2016 IPR000644 CBS domain APS56_RS15705 2ecbb3c3f01d508c8355043fc00694ed 393 Gene3D G3DSA:3.40.50.2300 1 123 4.7E-32 T 20-04-2016 APS56_RS15705 2ecbb3c3f01d508c8355043fc00694ed 393 Pfam PF00535 Glycosyl transferase family 2 140 306 2.0E-22 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS15705 2ecbb3c3f01d508c8355043fc00694ed 393 Pfam PF00072 Response regulator receiver domain 3 113 6.5E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15705 2ecbb3c3f01d508c8355043fc00694ed 393 SUPERFAMILY SSF52172 1 125 3.27E-32 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS15705 2ecbb3c3f01d508c8355043fc00694ed 393 Gene3D G3DSA:3.90.550.10 138 330 1.2E-21 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS15705 2ecbb3c3f01d508c8355043fc00694ed 393 PANTHER PTHR10859 120 378 5.6E-41 T 20-04-2016 APS56_RS15705 2ecbb3c3f01d508c8355043fc00694ed 393 SUPERFAMILY SSF53448 138 358 2.01E-29 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS15705 2ecbb3c3f01d508c8355043fc00694ed 393 SMART SM00448 1 113 2.0E-31 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00995 7006c098e9c9bcce39d9645b0a41ef24 479 Pfam PF13585 C-terminal domain of CHU protein family 395 477 1.7E-14 T 20-04-2016 APS56_RS00995 7006c098e9c9bcce39d9645b0a41ef24 479 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 395 478 2.3E-9 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 Pfam PF07971 Glycosyl hydrolase family 92 307 776 4.3E-152 T 20-04-2016 IPR012939 Glycosyl hydrolase family 92 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 Gene3D G3DSA:1.20.1050.60 414 504 1.5E-25 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 PANTHER PTHR12143:SF22 293 438 1.5E-148 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 PANTHER PTHR12143:SF22 38 227 1.5E-148 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 PANTHER PTHR12143:SF22 243 265 1.5E-148 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 PANTHER PTHR12143:SF22 456 778 1.5E-148 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 SUPERFAMILY SSF48208 330 763 4.42E-31 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 Gene3D G3DSA:3.30.2080.10 635 778 1.2E-57 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 PANTHER PTHR12143 293 438 1.5E-148 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 PANTHER PTHR12143 38 227 1.5E-148 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 PANTHER PTHR12143 243 265 1.5E-148 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 PANTHER PTHR12143 456 778 1.5E-148 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 Gene3D G3DSA:1.20.1610.10 511 634 8.9E-43 T 20-04-2016 APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 TIGRFAM TIGR01180 aman2_put: putative alpha-1,2-mannosidase 32 778 4.5E-169 T 20-04-2016 IPR005887 Alpha-1,2-mannosidase, putative KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APS56_RS02955 41cd64bab2a184bc1db3b98334e70c28 781 Gene3D G3DSA:2.70.98.10 43 390 6.0E-99 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS07145 178a9a0fb3aff8bae1c7b0b1bfd225e6 438 Gene3D G3DSA:1.20.1600.10 25 434 3.1E-66 T 20-04-2016 APS56_RS07145 178a9a0fb3aff8bae1c7b0b1bfd225e6 438 PANTHER PTHR30026 27 434 1.0E-45 T 20-04-2016 APS56_RS07145 178a9a0fb3aff8bae1c7b0b1bfd225e6 438 Pfam PF02321 Outer membrane efflux protein 243 429 3.0E-30 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS07145 178a9a0fb3aff8bae1c7b0b1bfd225e6 438 Pfam PF02321 Outer membrane efflux protein 27 221 9.6E-30 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS07145 178a9a0fb3aff8bae1c7b0b1bfd225e6 438 PANTHER PTHR30026:SF7 27 434 1.0E-45 T 20-04-2016 APS56_RS07145 178a9a0fb3aff8bae1c7b0b1bfd225e6 438 SUPERFAMILY SSF56954 3 434 1.31E-78 T 20-04-2016 APS56_RS11280 94b5040060a5d0401ee546618a323b64 142 SUPERFAMILY SSF82784 4 136 2.88E-29 T 20-04-2016 IPR003718 OsmC/Ohr family APS56_RS11280 94b5040060a5d0401ee546618a323b64 142 Pfam PF02566 OsmC-like protein 37 132 5.4E-16 T 20-04-2016 IPR003718 OsmC/Ohr family APS56_RS11280 94b5040060a5d0401ee546618a323b64 142 PANTHER PTHR34352 1 141 4.4E-34 T 20-04-2016 APS56_RS11280 94b5040060a5d0401ee546618a323b64 142 Gene3D G3DSA:2.20.25.10 4 34 5.0E-5 T 20-04-2016 APS56_RS11280 94b5040060a5d0401ee546618a323b64 142 Gene3D G3DSA:3.30.300.20 41 137 4.5E-31 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS12275 228c31f8fcf47c3bc5fe75ebdf9265a1 589 Pfam PF00488 MutS domain V 419 576 1.2E-28 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS12275 228c31f8fcf47c3bc5fe75ebdf9265a1 589 SUPERFAMILY SSF52540 378 587 4.31E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12275 228c31f8fcf47c3bc5fe75ebdf9265a1 589 Gene3D G3DSA:3.40.50.300 379 587 5.6E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12275 228c31f8fcf47c3bc5fe75ebdf9265a1 589 PANTHER PTHR11361 341 588 5.3E-51 T 20-04-2016 APS56_RS12275 228c31f8fcf47c3bc5fe75ebdf9265a1 589 SMART SM00534 415 587 9.5E-12 T 20-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS07930 74ab0f715730afed9eb6a3278435f66c 111 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 39 88 5.9E-14 T 20-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS07930 74ab0f715730afed9eb6a3278435f66c 111 Pfam PF02627 Carboxymuconolactone decarboxylase family 23 102 1.4E-18 T 20-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS07930 74ab0f715730afed9eb6a3278435f66c 111 PANTHER PTHR33930:SF4 5 110 6.9E-42 T 20-04-2016 APS56_RS07930 74ab0f715730afed9eb6a3278435f66c 111 TIGRFAM TIGR04169 perox_w_seleSAM: alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein 3 111 3.3E-57 T 20-04-2016 IPR026445 Alkylhydroperoxidase/carboxymuconolactone decarboxylase family APS56_RS07930 74ab0f715730afed9eb6a3278435f66c 111 Gene3D G3DSA:1.20.1290.10 13 109 4.2E-29 T 20-04-2016 IPR029032 AhpD-like APS56_RS07930 74ab0f715730afed9eb6a3278435f66c 111 SUPERFAMILY SSF69118 13 105 4.97E-23 T 20-04-2016 IPR029032 AhpD-like APS56_RS07930 74ab0f715730afed9eb6a3278435f66c 111 PANTHER PTHR33930 5 110 6.9E-42 T 20-04-2016 APS56_RS09445 691cfcf44c959671168ef4ac06b0287f 428 ProSitePatterns PS01219 Ammonium transporters signature. 166 191 - T 20-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 APS56_RS09445 691cfcf44c959671168ef4ac06b0287f 428 PANTHER PTHR11730 1 428 1.8E-151 T 20-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APS56_RS09445 691cfcf44c959671168ef4ac06b0287f 428 PANTHER PTHR11730:SF6 1 428 1.8E-151 T 20-04-2016 APS56_RS09445 691cfcf44c959671168ef4ac06b0287f 428 Pfam PF00909 Ammonium Transporter Family 23 418 9.3E-116 T 20-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APS56_RS09445 691cfcf44c959671168ef4ac06b0287f 428 TIGRFAM TIGR00836 amt: ammonium transporter 22 418 7.1E-119 T 20-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APS56_RS09445 691cfcf44c959671168ef4ac06b0287f 428 Gene3D G3DSA:1.10.3430.10 21 398 5.4E-114 T 20-04-2016 IPR029020 Ammonium/urea transporter APS56_RS09445 691cfcf44c959671168ef4ac06b0287f 428 SUPERFAMILY SSF111352 20 394 7.59E-106 T 20-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 Pfam PF01037 Lrp/AsnC ligand binding domain 76 148 3.0E-18 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 SUPERFAMILY SSF46785 9 70 1.8E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 Gene3D G3DSA:1.10.10.10 9 59 4.5E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 Gene3D G3DSA:3.30.70.920 74 148 1.3E-22 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 PANTHER PTHR30154 3 156 6.8E-49 T 20-04-2016 APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 SMART SM00344 10 117 1.9E-38 T 20-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 PANTHER PTHR30154:SF2 3 156 6.8E-49 T 20-04-2016 APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 Pfam PF13404 AsnC-type helix-turn-helix domain 10 51 1.6E-14 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 SUPERFAMILY SSF54909 73 152 8.18E-19 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 26 37 7.9E-12 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 10 26 7.9E-12 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS12310 25bed83669f8d11a59ee34af0ac120e9 156 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 37 56 7.9E-12 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS03380 7065fa693f7069251044a90656374b91 635 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 12 68 1.1E-18 T 20-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 APS56_RS03380 7065fa693f7069251044a90656374b91 635 ProSitePatterns PS00455 Putative AMP-binding domain signature. 247 258 - T 20-04-2016 IPR020845 AMP-binding, conserved site APS56_RS03380 7065fa693f7069251044a90656374b91 635 Gene3D G3DSA:3.40.50.980 67 252 8.7E-42 T 20-04-2016 APS56_RS03380 7065fa693f7069251044a90656374b91 635 SUPERFAMILY SSF56801 2 630 1.57E-163 T 20-04-2016 APS56_RS03380 7065fa693f7069251044a90656374b91 635 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 7 632 2.9E-287 T 20-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 APS56_RS03380 7065fa693f7069251044a90656374b91 635 Gene3D G3DSA:2.30.38.10 426 502 5.3E-5 T 20-04-2016 APS56_RS03380 7065fa693f7069251044a90656374b91 635 Pfam PF00501 AMP-binding enzyme 70 509 3.4E-88 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APS56_RS03380 7065fa693f7069251044a90656374b91 635 PANTHER PTHR24095 10 633 0.0 T 20-04-2016 APS56_RS03380 7065fa693f7069251044a90656374b91 635 Gene3D G3DSA:3.40.50.980 253 409 1.4E-28 T 20-04-2016 APS56_RS03380 7065fa693f7069251044a90656374b91 635 Gene3D G3DSA:3.30.300.30 504 610 6.1E-20 T 20-04-2016 APS56_RS03380 7065fa693f7069251044a90656374b91 635 Pfam PF13193 AMP-binding enzyme C-terminal domain 519 598 4.6E-19 T 20-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APS56_RS03380 7065fa693f7069251044a90656374b91 635 PANTHER PTHR24095:SF116 10 633 0.0 T 20-04-2016 APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 Gene3D G3DSA:3.90.1150.10 239 347 7.1E-29 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 SUPERFAMILY SSF53383 12 347 9.0E-67 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 207 216 - T 20-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 Pfam PF00155 Aminotransferase class I and II 47 344 8.3E-53 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 10 348 51.829 T 20-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 PANTHER PTHR11751 9 348 4.2E-112 T 20-04-2016 APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 348 5.3E-107 T 20-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 PANTHER PTHR11751:SF424 9 348 4.2E-112 T 20-04-2016 APS56_RS01940 ed7df11b8e2e3811c3754bf3cfb2a23c 348 Gene3D G3DSA:3.40.640.10 38 238 1.8E-71 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS00055 cc864c4bac327d1d9ccd756fc0cbdc06 415 PANTHER PTHR32347 6 415 7.9E-31 T 20-04-2016 APS56_RS00055 cc864c4bac327d1d9ccd756fc0cbdc06 415 PANTHER PTHR32347:SF16 6 415 7.9E-31 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Gene3D G3DSA:2.170.130.10 206 316 4.7E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Pfam PF13715 CarboxypepD_reg-like domain 116 195 1.5E-19 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Pfam PF07715 TonB-dependent Receptor Plug Domain 204 314 2.3E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 SUPERFAMILY SSF49464 116 194 6.15E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 PANTHER PTHR11532 623 1140 8.6E-224 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 PANTHER PTHR11532 113 506 8.6E-224 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 116 1142 5.9E-253 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 PANTHER PTHR11532:SF57 623 1140 8.6E-224 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 PANTHER PTHR11532:SF57 113 506 8.6E-224 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 SUPERFAMILY SSF56935 1050 1142 5.04E-82 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 SUPERFAMILY SSF56935 413 501 5.04E-82 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 SUPERFAMILY SSF56935 548 886 5.04E-82 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 SUPERFAMILY SSF56935 192 338 5.04E-82 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 SUPERFAMILY SSF56935 961 1005 5.04E-82 T 20-04-2016 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 290 320 2.1E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Gene3D G3DSA:2.60.40.1120 116 205 3.7E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Gene3D G3DSA:2.40.170.20 422 499 3.6E-49 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Gene3D G3DSA:2.40.170.20 317 347 3.6E-49 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Gene3D G3DSA:2.40.170.20 970 995 3.6E-49 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Gene3D G3DSA:2.40.170.20 542 913 3.6E-49 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06245 dc83160a1354cd3fa408bc251f3b702b 1142 Gene3D G3DSA:2.40.170.20 1044 1142 3.6E-49 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12300 8f239d73008fe6a745ba16b6cbad01ac 226 PANTHER PTHR11907 13 223 1.1E-30 T 20-04-2016 APS56_RS12300 8f239d73008fe6a745ba16b6cbad01ac 226 PANTHER PTHR11907:SF9 13 223 1.1E-30 T 20-04-2016 APS56_RS12300 8f239d73008fe6a745ba16b6cbad01ac 226 SUPERFAMILY SSF53271 74 223 4.33E-22 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS12300 8f239d73008fe6a745ba16b6cbad01ac 226 Pfam PF00156 Phosphoribosyl transferase domain 134 219 1.8E-6 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APS56_RS12300 8f239d73008fe6a745ba16b6cbad01ac 226 Gene3D G3DSA:3.40.50.2020 37 221 1.5E-24 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 20-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 TIGRFAM TIGR01138 cysM: cysteine synthase B 6 295 1.5E-125 T 20-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 284 2.9E-67 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 295 1.9E-113 T 20-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 PANTHER PTHR10314 6 296 5.1E-137 T 20-04-2016 APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 SUPERFAMILY SSF53686 3 295 3.8E-88 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 PANTHER PTHR10314:SF100 6 296 5.1E-137 T 20-04-2016 APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 Gene3D G3DSA:3.40.50.1100 43 143 1.6E-36 T 20-04-2016 APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 Gene3D G3DSA:3.40.50.1100 149 295 4.0E-76 T 20-04-2016 APS56_RS07370 830bf2df1e2fa2e1d506737c39211aec 296 Gene3D G3DSA:3.40.50.1100 4 42 4.0E-76 T 20-04-2016 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 SUPERFAMILY SSF48150 2 218 3.14E-70 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 Gene3D G3DSA:3.90.79.10 227 342 4.4E-9 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 SMART SM00478 35 186 5.2E-48 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 Pfam PF00633 Helix-hairpin-helix motif 96 124 8.8E-7 T 20-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 SUPERFAMILY SSF55811 216 342 9.12E-10 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 160 5.0E-17 T 20-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 PANTHER PTHR10359 1 330 1.7E-89 T 20-04-2016 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 Pfam PF14815 NUDIX domain 232 342 3.9E-13 T 20-04-2016 IPR029119 MutY, C-terminal APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 2 268 1.6E-100 T 20-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 PANTHER PTHR10359:SF1 1 330 1.7E-89 T 20-04-2016 APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 Gene3D G3DSA:1.10.1670.10 119 220 1.7E-40 T 20-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APS56_RS11880 7111e29f8d4983556b94cf734ad02f3e 346 Gene3D G3DSA:1.10.340.30 18 118 3.9E-40 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 120 1.6E-27 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 126 138 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 20-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 Gene3D G3DSA:1.20.140.10 219 382 2.6E-55 T 20-04-2016 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 PANTHER PTHR10909 2 379 1.4E-134 T 20-04-2016 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 3.5E-39 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 Gene3D G3DSA:1.10.540.10 2 122 1.3E-34 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 218 3.5E-24 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 SUPERFAMILY SSF47203 228 381 8.38E-46 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 Gene3D G3DSA:2.40.110.10 123 218 2.0E-36 T 20-04-2016 APS56_RS05615 ff9599a9b9906e05a73d20b375a2363a 388 SUPERFAMILY SSF56645 3 240 2.09E-79 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 PANTHER PTHR11451 9 96 3.0E-226 T 20-04-2016 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 PANTHER PTHR11451 112 466 3.0E-226 T 20-04-2016 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 SMART SM00946 425 492 3.9E-32 T 20-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 PANTHER PTHR11451:SF6 9 96 3.0E-226 T 20-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 PANTHER PTHR11451:SF6 112 466 3.0E-226 T 20-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 114 283 4.8E-18 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 Gene3D G3DSA:3.40.50.800 296 416 8.9E-39 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 Gene3D G3DSA:3.30.930.10 4 295 1.2E-107 T 20-04-2016 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 Gene3D G3DSA:3.30.110.30 419 491 1.0E-29 T 20-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 Pfam PF03129 Anticodon binding domain 302 398 9.5E-19 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 SUPERFAMILY SSF52954 290 418 4.91E-34 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 Pfam PF09180 Prolyl-tRNA synthetase, C-terminal 425 492 5.7E-23 T 20-04-2016 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 SUPERFAMILY SSF55681 10 289 1.23E-71 T 20-04-2016 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 6 492 6.2E-164 T 20-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 SUPERFAMILY SSF64586 420 492 4.51E-21 T 20-04-2016 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APS56_RS15500 bc443edf5e3e7d6dac4424daacca08a1 492 Hamap MF_01571 Proline--tRNA ligase [proS]. 5 492 43.143 T 20-04-2016 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APS56_RS13105 1ad6db3d5a03202acbbbb15242b876db 171 PANTHER PTHR13061 1 171 1.5E-68 T 20-04-2016 APS56_RS13105 1ad6db3d5a03202acbbbb15242b876db 171 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 13 46 1.0E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS13105 1ad6db3d5a03202acbbbb15242b876db 171 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 90 125 3.1E-9 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS13105 1ad6db3d5a03202acbbbb15242b876db 171 SUPERFAMILY SSF51161 6 158 6.38E-45 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS13105 1ad6db3d5a03202acbbbb15242b876db 171 Gene3D G3DSA:2.160.10.10 5 167 2.6E-43 T 20-04-2016 APS56_RS07015 f6b9108c1c317e61670ea118b47fdda9 800 TIGRFAM TIGR03783 Bac_Flav_CT_G: Bacteroides conjugation system ATPase, TraG family 5 796 4.3E-97 T 20-04-2016 IPR022509 Conjugation system ATPase, TraG APS56_RS07015 f6b9108c1c317e61670ea118b47fdda9 800 Gene3D G3DSA:3.40.50.300 595 707 1.9E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07015 f6b9108c1c317e61670ea118b47fdda9 800 Gene3D G3DSA:3.40.50.300 421 484 1.9E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07015 f6b9108c1c317e61670ea118b47fdda9 800 PANTHER PTHR38467 1 799 1.1E-76 T 20-04-2016 APS56_RS07015 f6b9108c1c317e61670ea118b47fdda9 800 Pfam PF01935 Domain of unknown function DUF87 422 619 4.9E-11 T 20-04-2016 IPR002789 Helicase HerA, central domain APS56_RS07015 f6b9108c1c317e61670ea118b47fdda9 800 SUPERFAMILY SSF52540 390 735 1.88E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07015 f6b9108c1c317e61670ea118b47fdda9 800 Pfam PF12991 Domain of unknown function, B. Theta Gene description (DUF3875) 2 51 9.5E-18 T 20-04-2016 IPR024451 Domain of unknown function DUF3875 APS56_RS00215 2cedce3d5b853de4a52ecd75d726bdaa 184 Gene3D G3DSA:1.20.1440.20 14 184 2.2E-64 T 20-04-2016 IPR023353 LemA-like domain APS56_RS00215 2cedce3d5b853de4a52ecd75d726bdaa 184 SUPERFAMILY SSF140478 25 172 1.83E-55 T 20-04-2016 IPR023353 LemA-like domain APS56_RS00215 2cedce3d5b853de4a52ecd75d726bdaa 184 Pfam PF04011 LemA family 7 184 1.4E-69 T 20-04-2016 IPR007156 LemA APS56_RS00215 2cedce3d5b853de4a52ecd75d726bdaa 184 PANTHER PTHR34478 1 184 1.5E-75 T 20-04-2016 APS56_RS00215 2cedce3d5b853de4a52ecd75d726bdaa 184 PANTHER PTHR34478:SF2 1 184 1.5E-75 T 20-04-2016 APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 Gene3D G3DSA:1.10.10.10 278 351 1.5E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 SMART SM00448 2 115 7.5E-39 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 Pfam PF13545 Crp-like helix-turn-helix domain 282 350 2.9E-12 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 SUPERFAMILY SSF52172 2 128 1.71E-36 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 SMART SM00100 144 261 8.8E-6 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 SUPERFAMILY SSF46785 278 351 5.69E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 SMART SM00419 296 344 1.9E-5 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 Pfam PF00072 Response regulator receiver domain 4 116 6.1E-27 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 PANTHER PTHR26402 321 340 9.6E-38 T 20-04-2016 APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 PANTHER PTHR26402 2 133 9.6E-38 T 20-04-2016 APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 Gene3D G3DSA:2.60.120.10 149 275 7.8E-25 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 Gene3D G3DSA:3.40.50.2300 2 127 5.5E-37 T 20-04-2016 APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 Pfam PF00027 Cyclic nucleotide-binding domain 162 248 1.9E-15 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS07855 61978c5ae175864650f7198a23e9d2dc 352 SUPERFAMILY SSF51206 150 276 9.17E-30 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 Gene3D G3DSA:3.40.50.300 1 200 1.6E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 3 188 5.9E-41 T 20-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 SUPERFAMILY SSF52540 3 194 9.79E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 PANTHER PTHR10285 2 189 3.5E-82 T 20-04-2016 APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 PRINTS PR00988 Uridine kinase signature 168 181 3.2E-34 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 PRINTS PR00988 Uridine kinase signature 146 157 3.2E-34 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 PRINTS PR00988 Uridine kinase signature 1 18 3.2E-34 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 PRINTS PR00988 Uridine kinase signature 132 142 3.2E-34 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 PRINTS PR00988 Uridine kinase signature 31 42 3.2E-34 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 PRINTS PR00988 Uridine kinase signature 76 91 3.2E-34 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APS56_RS14540 09e5649dfbe09d948c9970256352bfd2 201 TIGRFAM TIGR00235 udk: uridine kinase 2 199 3.6E-78 T 20-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APS56_RS03175 8e98097852106ee241b38077949a3d1a 386 PANTHER PTHR30128 241 384 3.8E-27 T 20-04-2016 APS56_RS03175 8e98097852106ee241b38077949a3d1a 386 Gene3D G3DSA:2.40.160.20 71 180 3.2E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS03175 8e98097852106ee241b38077949a3d1a 386 Pfam PF00691 OmpA family 278 366 4.9E-14 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS03175 8e98097852106ee241b38077949a3d1a 386 Gene3D G3DSA:3.30.1330.60 267 384 3.6E-29 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS03175 8e98097852106ee241b38077949a3d1a 386 PRINTS PR01021 OMPA domain signature 308 323 6.7E-9 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS03175 8e98097852106ee241b38077949a3d1a 386 PRINTS PR01021 OMPA domain signature 278 300 6.7E-9 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS03175 8e98097852106ee241b38077949a3d1a 386 PRINTS PR01021 OMPA domain signature 323 339 6.7E-9 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS03175 8e98097852106ee241b38077949a3d1a 386 SUPERFAMILY SSF103088 269 383 4.45E-24 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS09700 f4c5f66a8d02521936674318a72f2d9c 326 PANTHER PTHR22925 52 207 1.5E-16 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS09700 f4c5f66a8d02521936674318a72f2d9c 326 SUPERFAMILY SSF75005 51 250 1.68E-33 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09700 f4c5f66a8d02521936674318a72f2d9c 326 Pfam PF04616 Glycosyl hydrolases family 43 52 182 1.5E-14 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS09700 f4c5f66a8d02521936674318a72f2d9c 326 Gene3D G3DSA:2.115.10.20 51 194 2.2E-26 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09700 f4c5f66a8d02521936674318a72f2d9c 326 Gene3D G3DSA:2.115.10.20 195 246 1.7E-7 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS03600 5418a9afbf9e83c5fd5ccb49febb90ae 304 SUPERFAMILY SSF56601 3 304 3.56E-96 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS03600 5418a9afbf9e83c5fd5ccb49febb90ae 304 PANTHER PTHR12544 2 304 9.6E-112 T 20-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APS56_RS03600 5418a9afbf9e83c5fd5ccb49febb90ae 304 Gene3D G3DSA:3.40.710.10 3 304 1.3E-110 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS03600 5418a9afbf9e83c5fd5ccb49febb90ae 304 Pfam PF04960 Glutaminase 22 304 8.9E-105 T 20-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APS56_RS03600 5418a9afbf9e83c5fd5ccb49febb90ae 304 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 304 5.9E-115 T 20-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APS56_RS03600 5418a9afbf9e83c5fd5ccb49febb90ae 304 Hamap MF_00313 Glutaminase [glsA]. 4 304 40.431 T 20-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APS56_RS00090 8737b28b95bf46a84d90409190561f3a 300 Gene3D G3DSA:3.40.1090.10 2 196 2.8E-8 T 20-04-2016 APS56_RS00090 8737b28b95bf46a84d90409190561f3a 300 SUPERFAMILY SSF52151 2 289 1.52E-32 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APS56_RS00090 8737b28b95bf46a84d90409190561f3a 300 Pfam PF01734 Patatin-like phospholipase 4 195 5.4E-15 T 20-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APS56_RS07655 e511c6497ea390d722102c7ba6431e37 391 PANTHER PTHR40841:SF2 36 333 4.4E-33 T 20-04-2016 APS56_RS07655 e511c6497ea390d722102c7ba6431e37 391 SUPERFAMILY SSF48452 312 387 1.55E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS07655 e511c6497ea390d722102c7ba6431e37 391 SUPERFAMILY SSF53474 18 278 7.13E-52 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS07655 e511c6497ea390d722102c7ba6431e37 391 Gene3D G3DSA:1.25.40.10 320 388 1.0E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS07655 e511c6497ea390d722102c7ba6431e37 391 Gene3D G3DSA:3.40.50.1820 27 278 1.0E-65 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS07655 e511c6497ea390d722102c7ba6431e37 391 PANTHER PTHR40841 36 333 4.4E-33 T 20-04-2016 APS56_RS07655 e511c6497ea390d722102c7ba6431e37 391 Pfam PF00756 Putative esterase 33 191 4.7E-20 T 20-04-2016 IPR000801 Putative esterase APS56_RS03655 2ceda215a8b4d7017a05abce0e5c1a0b 372 PANTHER PTHR30404 19 287 1.7E-58 T 20-04-2016 APS56_RS03655 2ceda215a8b4d7017a05abce0e5c1a0b 372 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 35 251 1.6E-52 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APS56_RS03655 2ceda215a8b4d7017a05abce0e5c1a0b 372 Gene3D G3DSA:3.40.630.40 33 130 5.5E-60 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APS56_RS03655 2ceda215a8b4d7017a05abce0e5c1a0b 372 Gene3D G3DSA:3.40.630.40 179 254 5.5E-60 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APS56_RS03655 2ceda215a8b4d7017a05abce0e5c1a0b 372 SMART SM00646 94 251 1.6E-27 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APS56_RS03655 2ceda215a8b4d7017a05abce0e5c1a0b 372 PANTHER PTHR30404:SF0 19 287 1.7E-58 T 20-04-2016 APS56_RS03655 2ceda215a8b4d7017a05abce0e5c1a0b 372 SUPERFAMILY SSF53187 178 256 2.13E-51 T 20-04-2016 APS56_RS03655 2ceda215a8b4d7017a05abce0e5c1a0b 372 SUPERFAMILY SSF53187 33 129 2.13E-51 T 20-04-2016 APS56_RS09815 2d09e596184d856019907faf22de1b12 532 Pfam PF00884 Sulfatase 30 377 2.1E-73 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09815 2d09e596184d856019907faf22de1b12 532 PANTHER PTHR10342 2 495 1.5E-143 T 20-04-2016 APS56_RS09815 2d09e596184d856019907faf22de1b12 532 SUPERFAMILY SSF53649 29 476 2.04E-120 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09815 2d09e596184d856019907faf22de1b12 532 ProSitePatterns PS00149 Sulfatases signature 2. 141 151 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09815 2d09e596184d856019907faf22de1b12 532 Gene3D G3DSA:3.40.720.10 29 398 9.6E-106 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09815 2d09e596184d856019907faf22de1b12 532 PANTHER PTHR10342:SF199 2 495 1.5E-143 T 20-04-2016 APS56_RS09815 2d09e596184d856019907faf22de1b12 532 Pfam PF16347 Domain of unknown function (DUF4976) 383 471 6.0E-12 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS09815 2d09e596184d856019907faf22de1b12 532 Gene3D G3DSA:3.30.1120.10 400 482 5.1E-17 T 20-04-2016 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 SMART SM01383 42 118 5.7E-44 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 Gene3D G3DSA:4.10.950.10 197 274 2.4E-30 T 20-04-2016 IPR014726 Ribosomal protein L2, domain 3 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 43.89 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 127 249 1.6E-50 T 20-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 SMART SM01382 125 252 5.3E-83 T 20-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 2.1E-116 T 20-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 PIRSF PIRSF002158 13 275 4.3E-89 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 SUPERFAMILY SSF50104 127 272 2.47E-55 T 20-04-2016 IPR008991 Translation protein SH3-like domain APS56_RS13960 344966869c5c5f33b973919f0847f273 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.0E-31 T 20-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 PANTHER PTHR13691 1 275 1.3E-128 T 20-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13960 344966869c5c5f33b973919f0847f273 275 SUPERFAMILY SSF50249 3 120 1.75E-46 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13960 344966869c5c5f33b973919f0847f273 275 Gene3D G3DSA:2.40.50.140 1 114 9.0E-51 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13960 344966869c5c5f33b973919f0847f273 275 Gene3D G3DSA:2.30.30.30 124 196 2.4E-30 T 20-04-2016 IPR014722 Ribosomal protein L2 domain 2 APS56_RS05145 3257f490a209a941c435ff13566d516c 314 PANTHER PTHR11078 199 314 5.7E-27 T 20-04-2016 IPR011605 NusB antitermination factor GO:0006353 APS56_RS05145 3257f490a209a941c435ff13566d516c 314 Gene3D G3DSA:1.10.940.10 1 33 3.0E-39 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APS56_RS05145 3257f490a209a941c435ff13566d516c 314 Gene3D G3DSA:1.10.940.10 198 297 3.0E-39 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APS56_RS05145 3257f490a209a941c435ff13566d516c 314 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 205 299 5.7E-27 T 20-04-2016 IPR011605 NusB antitermination factor GO:0006353 APS56_RS05145 3257f490a209a941c435ff13566d516c 314 SUPERFAMILY SSF48013 188 304 1.7E-23 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APS56_RS05145 3257f490a209a941c435ff13566d516c 314 Pfam PF01029 NusB family 206 298 3.4E-22 T 20-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 Gene3D G3DSA:3.40.50.620 11 196 1.1E-138 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 Gene3D G3DSA:3.40.50.620 457 721 1.1E-138 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 SUPERFAMILY SSF47323 1047 1118 9.16E-6 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 SUPERFAMILY SSF47323 737 982 3.74E-55 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 Pfam PF08264 Anticodon-binding domain of tRNA 769 921 2.2E-31 T 20-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 3 1131 13.547 T 20-04-2016 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PANTHER PTHR11946 433 543 0.0 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PANTHER PTHR11946 299 416 0.0 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PANTHER PTHR11946 580 1024 0.0 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PANTHER PTHR11946 2 255 0.0 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 Gene3D G3DSA:3.90.740.10 235 456 3.8E-48 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 Gene3D G3DSA:1.10.730.10 722 913 6.1E-48 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 20 717 4.7E-157 T 20-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 SUPERFAMILY SSF52374 453 731 4.65E-125 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 SUPERFAMILY SSF52374 9 200 4.65E-125 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PANTHER PTHR11946:SF87 433 543 0.0 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PANTHER PTHR11946:SF87 299 416 0.0 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PANTHER PTHR11946:SF87 580 1024 0.0 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PANTHER PTHR11946:SF87 2 255 0.0 T 20-04-2016 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 10 931 2.4E-304 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 SUPERFAMILY SSF50677 204 453 9.52E-34 T 20-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 599 612 3.5E-17 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 641 650 3.5E-17 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 451 466 3.5E-17 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APS56_RS12090 30952ac00bcc7bbbf490fc65504bec36 1134 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 43 54 3.5E-17 T 20-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APS56_RS05355 f79a3775a45c52a08444dae89cdc349d 359 SUPERFAMILY SSF53756 52 353 2.87E-49 T 20-04-2016 APS56_RS05355 f79a3775a45c52a08444dae89cdc349d 359 Pfam PF00534 Glycosyl transferases group 1 165 335 1.8E-31 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS05355 f79a3775a45c52a08444dae89cdc349d 359 Pfam PF13439 Glycosyltransferase Family 4 34 157 5.1E-7 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS05355 f79a3775a45c52a08444dae89cdc349d 359 PANTHER PTHR12526 82 354 2.0E-34 T 20-04-2016 APS56_RS05355 f79a3775a45c52a08444dae89cdc349d 359 Gene3D G3DSA:3.40.50.2000 168 333 5.8E-15 T 20-04-2016 APS56_RS13315 e1e020366bf43e632f12779179ee31d6 305 Gene3D G3DSA:3.40.50.720 118 250 5.9E-16 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13315 e1e020366bf43e632f12779179ee31d6 305 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 140 250 9.5E-12 T 20-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APS56_RS13315 e1e020366bf43e632f12779179ee31d6 305 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 304 5.4E-16 T 20-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APS56_RS13315 e1e020366bf43e632f12779179ee31d6 305 Gene3D G3DSA:3.40.50.720 16 117 7.0E-18 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13315 e1e020366bf43e632f12779179ee31d6 305 SUPERFAMILY SSF52283 15 159 3.4E-17 T 20-04-2016 APS56_RS13315 e1e020366bf43e632f12779179ee31d6 305 SUPERFAMILY SSF51735 109 251 4.71E-15 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13315 e1e020366bf43e632f12779179ee31d6 305 PANTHER PTHR10996 30 199 1.3E-16 T 20-04-2016 APS56_RS03245 f67e8b9a6da7799c7d44e04594bc8fff 682 SUPERFAMILY SSF109604 463 676 1.43E-20 T 20-04-2016 APS56_RS03245 f67e8b9a6da7799c7d44e04594bc8fff 682 Pfam PF01966 HD domain 478 619 6.6E-18 T 20-04-2016 IPR006674 HD domain APS56_RS03245 f67e8b9a6da7799c7d44e04594bc8fff 682 Pfam PF07697 7TM-HD extracellular 51 251 2.5E-12 T 20-04-2016 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain APS56_RS03245 f67e8b9a6da7799c7d44e04594bc8fff 682 TIGRFAM TIGR00277 HDIG: HDIG domain 476 573 8.2E-26 T 20-04-2016 IPR006675 HDIG domain APS56_RS03245 f67e8b9a6da7799c7d44e04594bc8fff 682 Gene3D G3DSA:1.10.3210.10 464 675 3.8E-31 T 20-04-2016 IPR006674 HD domain APS56_RS03245 f67e8b9a6da7799c7d44e04594bc8fff 682 Pfam PF07698 7TM receptor with intracellular HD hydrolase 266 453 8.3E-37 T 20-04-2016 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain APS56_RS03245 f67e8b9a6da7799c7d44e04594bc8fff 682 PANTHER PTHR36442 58 682 4.2E-126 T 20-04-2016 APS56_RS03245 f67e8b9a6da7799c7d44e04594bc8fff 682 SMART SM00471 474 629 4.6E-9 T 20-04-2016 IPR003607 HD/PDEase domain APS56_RS04315 872c4d59ef3b5a6b5a9ab5f44a75d95a 437 SUPERFAMILY SSF53850 50 183 2.61E-27 T 20-04-2016 APS56_RS04315 872c4d59ef3b5a6b5a9ab5f44a75d95a 437 PANTHER PTHR41312 2 437 1.0E-36 T 20-04-2016 APS56_RS04315 872c4d59ef3b5a6b5a9ab5f44a75d95a 437 Pfam PF12698 ABC-2 family transporter protein 19 412 4.9E-57 T 20-04-2016 APS56_RS04315 872c4d59ef3b5a6b5a9ab5f44a75d95a 437 Gene3D G3DSA:3.40.190.10 42 158 4.8E-21 T 20-04-2016 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Gene3D G3DSA:2.40.170.20 512 631 3.5E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Gene3D G3DSA:2.40.170.20 227 300 3.5E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Gene3D G3DSA:2.40.170.20 680 941 3.5E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Gene3D G3DSA:2.40.170.20 372 373 3.5E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Gene3D G3DSA:2.40.170.20 429 480 3.5E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Gene3D G3DSA:2.60.40.1120 23 102 1.9E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 SUPERFAMILY SSF56935 416 468 8.06E-73 T 20-04-2016 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 SUPERFAMILY SSF56935 102 286 8.06E-73 T 20-04-2016 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 SUPERFAMILY SSF56935 501 630 8.06E-73 T 20-04-2016 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 SUPERFAMILY SSF56935 702 745 8.06E-73 T 20-04-2016 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 SUPERFAMILY SSF56935 791 938 8.06E-73 T 20-04-2016 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 222 1.6E-11 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Gene3D G3DSA:2.170.130.10 103 226 4.1E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Pfam PF00593 TonB dependent receptor 599 933 1.6E-24 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 PANTHER PTHR11532:SF57 5 222 6.2E-24 T 20-04-2016 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 SUPERFAMILY SSF49464 23 111 3.14E-17 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 Pfam PF13715 CarboxypepD_reg-like domain 23 104 6.8E-20 T 20-04-2016 APS56_RS12035 35828ab22ed8fe68941f3b62f21b3493 946 PANTHER PTHR11532 5 222 6.2E-24 T 20-04-2016 APS56_RS09235 6d6c70069f5126c3eaba4c39c19a3d5f 859 PANTHER PTHR11731:SF133 313 458 1.5E-18 T 20-04-2016 APS56_RS09235 6d6c70069f5126c3eaba4c39c19a3d5f 859 SUPERFAMILY SSF53474 310 559 5.27E-29 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS09235 6d6c70069f5126c3eaba4c39c19a3d5f 859 PANTHER PTHR11731 313 458 1.5E-18 T 20-04-2016 APS56_RS09235 6d6c70069f5126c3eaba4c39c19a3d5f 859 Pfam PF00756 Putative esterase 394 435 6.5E-5 T 20-04-2016 IPR000801 Putative esterase APS56_RS09235 6d6c70069f5126c3eaba4c39c19a3d5f 859 Gene3D G3DSA:3.40.50.1820 304 560 5.0E-27 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS00505 b1ac916cf7c4b4071dd18c23dca43bec 519 SUPERFAMILY SSF51126 271 511 1.73E-5 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS06665 38927ffabd191b7724baa1af50ce027f 290 PANTHER PTHR22916 4 206 1.5E-35 T 20-04-2016 APS56_RS06665 38927ffabd191b7724baa1af50ce027f 290 SUPERFAMILY SSF53448 4 263 7.74E-43 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS06665 38927ffabd191b7724baa1af50ce027f 290 Gene3D G3DSA:3.90.550.10 4 227 6.2E-38 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS06665 38927ffabd191b7724baa1af50ce027f 290 Pfam PF00535 Glycosyl transferase family 2 7 145 4.4E-22 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 Pfam PF02811 PHP domain 263 452 3.5E-40 T 20-04-2016 IPR004013 PHP domain GO:0003824 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 Pfam PF00929 Exonuclease 3 182 4.1E-9 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 589 1026 2.2E-165 T 20-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 PANTHER PTHR32294:SF0 332 1462 0.0 T 20-04-2016 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 PANTHER PTHR32294:SF0 257 310 0.0 T 20-04-2016 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 Gene3D G3DSA:3.30.420.10 1 189 6.0E-33 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 SUPERFAMILY SSF53098 2 210 1.52E-56 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 SUPERFAMILY SSF53098 358 630 1.52E-56 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 SMART SM00481 262 350 1.9E-16 T 20-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 261 1331 0.0 T 20-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 Pfam PF14579 Helix-hairpin-helix motif 1101 1190 3.1E-24 T 20-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 Gene3D G3DSA:1.10.150.280 1127 1173 3.4E-6 T 20-04-2016 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 SMART SM00479 1 192 1.3E-8 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 Gene3D G3DSA:3.20.20.140 261 541 4.9E-34 T 20-04-2016 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 PANTHER PTHR32294 332 1462 0.0 T 20-04-2016 APS56_RS12555 8a2ed83edb0a6310d2dee975c28a155a 1462 PANTHER PTHR32294 257 310 0.0 T 20-04-2016 APS56_RS14970 6d1b2419e54ac74d3594183cd8f534aa 102 Gene3D G3DSA:3.40.250.10 2 99 6.8E-29 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS14970 6d1b2419e54ac74d3594183cd8f534aa 102 PANTHER PTHR12231:SF91 18 102 4.2E-15 T 20-04-2016 APS56_RS14970 6d1b2419e54ac74d3594183cd8f534aa 102 PANTHER PTHR12231 18 102 4.2E-15 T 20-04-2016 APS56_RS14970 6d1b2419e54ac74d3594183cd8f534aa 102 Pfam PF00581 Rhodanese-like domain 8 98 1.2E-17 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS14970 6d1b2419e54ac74d3594183cd8f534aa 102 SUPERFAMILY SSF52821 3 100 1.96E-29 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS14970 6d1b2419e54ac74d3594183cd8f534aa 102 SMART SM00450 5 102 2.2E-19 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS07950 82923816b9e8b452f5f91477d64c4fa3 164 SMART SM00450 35 133 1.7E-14 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS07950 82923816b9e8b452f5f91477d64c4fa3 164 PANTHER PTHR12231 45 134 1.2E-13 T 20-04-2016 APS56_RS07950 82923816b9e8b452f5f91477d64c4fa3 164 SUPERFAMILY SSF52821 31 136 4.19E-25 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS07950 82923816b9e8b452f5f91477d64c4fa3 164 Gene3D G3DSA:3.40.250.10 29 141 5.0E-26 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS07950 82923816b9e8b452f5f91477d64c4fa3 164 Pfam PF00581 Rhodanese-like domain 44 129 5.8E-16 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS06480 4225bf9c848d43e2021b74016ec3d5c0 451 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 5 449 3.2E-139 T 20-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APS56_RS06480 4225bf9c848d43e2021b74016ec3d5c0 451 PANTHER PTHR37839 2 451 6.4E-144 T 20-04-2016 APS56_RS06480 4225bf9c848d43e2021b74016ec3d5c0 451 Pfam PF11973 NQRA C-terminal domain 263 313 1.1E-15 T 20-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 APS56_RS06480 4225bf9c848d43e2021b74016ec3d5c0 451 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 4 450 41.857 T 20-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APS56_RS06480 4225bf9c848d43e2021b74016ec3d5c0 451 PANTHER PTHR37839:SF1 2 451 6.4E-144 T 20-04-2016 APS56_RS06480 4225bf9c848d43e2021b74016ec3d5c0 451 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 5 258 1.8E-89 T 20-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 SUPERFAMILY SSF82689 173 267 1.7E-31 T 20-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 Gene3D G3DSA:2.30.30.60 120 169 1.6E-20 T 20-04-2016 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 Pfam PF00924 Mechanosensitive ion channel 67 259 4.5E-54 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 SUPERFAMILY SSF82861 18 103 2.09E-18 T 20-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 134 168 - T 20-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 Gene3D G3DSA:3.30.70.100 173 257 4.5E-31 T 20-04-2016 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 PANTHER PTHR30221:SF7 1 262 1.2E-94 T 20-04-2016 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 PANTHER PTHR30221 1 262 1.2E-94 T 20-04-2016 APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 SUPERFAMILY SSF50182 105 170 4.9E-18 T 20-04-2016 IPR010920 LSM domain APS56_RS13085 ccafc41ec9ca583af4fe99baada3bf3f 271 Pfam PF05552 Conserved TM helix 12 54 8.1E-7 T 20-04-2016 IPR008910 Conserved TM helix APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 ProSitePatterns PS00211 ABC transporters family signature. 507 521 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 PANTHER PTHR24221 90 608 6.3E-200 T 20-04-2016 APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 PANTHER PTHR24221 1 54 6.3E-200 T 20-04-2016 APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 Pfam PF00005 ABC transporter 386 535 1.8E-35 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 SMART SM00382 395 581 6.1E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 SUPERFAMILY SSF52540 359 605 7.37E-92 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 Gene3D G3DSA:1.20.1560.10 4 354 6.2E-61 T 20-04-2016 APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 Pfam PF00664 ABC transporter transmembrane region 20 317 2.8E-33 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 SUPERFAMILY SSF90123 86 357 1.03E-59 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 SUPERFAMILY SSF90123 2 49 1.03E-59 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS08785 1646ce31cd28b9ee83406e37a202ae57 610 Gene3D G3DSA:3.40.50.300 370 599 7.6E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 SUPERFAMILY SSF51735 103 290 2.61E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 23 320 3.8E-27 T 20-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 Gene3D G3DSA:3.40.50.720 114 291 6.0E-66 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 152 179 - T 20-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 PANTHER PTHR10996 1 321 1.6E-104 T 20-04-2016 APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 Gene3D G3DSA:3.40.50.720 1 113 8.0E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 3.3E-60 T 20-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 20-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 SUPERFAMILY SSF52283 1 123 2.08E-28 T 20-04-2016 APS56_RS04150 f1e358a0149f4f159b84b48aa5bed9e2 321 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 20-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 Pfam PF04542 Sigma-70 region 2 35 95 4.7E-7 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 SUPERFAMILY SSF88946 12 112 3.37E-17 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 Pfam PF08281 Sigma-70, region 4 125 176 2.9E-11 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 PANTHER PTHR30173 6 186 6.8E-33 T 20-04-2016 APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 Gene3D G3DSA:1.10.1740.10 13 115 7.1E-15 T 20-04-2016 APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 Gene3D G3DSA:1.10.10.10 119 182 9.7E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 ProSitePatterns PS00622 LuxR-type HTH domain signature. 148 175 - T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 SUPERFAMILY SSF88659 109 179 1.46E-15 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00945 124072171d958cbfd3318b1bb471ccc9 193 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 178 1.0E-26 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS10010 38bbbcb7404bb894f113b89e06d962fa 192 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 62 1.8E-7 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APS56_RS10010 38bbbcb7404bb894f113b89e06d962fa 192 Pfam PF01467 Cytidylyltransferase-like 5 165 2.3E-26 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APS56_RS10010 38bbbcb7404bb894f113b89e06d962fa 192 PANTHER PTHR12039 1 192 5.2E-33 T 20-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APS56_RS10010 38bbbcb7404bb894f113b89e06d962fa 192 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 191 2.1E-51 T 20-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APS56_RS10010 38bbbcb7404bb894f113b89e06d962fa 192 Gene3D G3DSA:3.40.50.620 1 192 8.9E-58 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS10010 38bbbcb7404bb894f113b89e06d962fa 192 SUPERFAMILY SSF52374 1 191 7.7E-54 T 20-04-2016 APS56_RS10010 38bbbcb7404bb894f113b89e06d962fa 192 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 192 27.318 T 20-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APS56_RS05195 2dceabb80eab9b0e5e341c0196d96110 286 SMART SM00244 50 218 3.2E-10 T 20-04-2016 IPR001107 Band 7 domain APS56_RS05195 2dceabb80eab9b0e5e341c0196d96110 286 Pfam PF01145 SPFH domain / Band 7 family 54 230 2.1E-24 T 20-04-2016 IPR001107 Band 7 domain APS56_RS05195 2dceabb80eab9b0e5e341c0196d96110 286 PANTHER PTHR10264 33 223 3.0E-64 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APS56_RS05195 2dceabb80eab9b0e5e341c0196d96110 286 PANTHER PTHR10264 246 261 3.0E-64 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APS56_RS05195 2dceabb80eab9b0e5e341c0196d96110 286 SUPERFAMILY SSF117892 87 221 1.57E-8 T 20-04-2016 IPR001107 Band 7 domain APS56_RS05195 2dceabb80eab9b0e5e341c0196d96110 286 PANTHER PTHR10264:SF46 33 223 3.0E-64 T 20-04-2016 APS56_RS05195 2dceabb80eab9b0e5e341c0196d96110 286 PANTHER PTHR10264:SF46 246 261 3.0E-64 T 20-04-2016 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 Pfam PF00364 Biotin-requiring enzyme 5 76 6.3E-20 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 Pfam PF00364 Biotin-requiring enzyme 138 209 3.3E-20 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 Gene3D G3DSA:4.10.320.10 264 310 6.8E-19 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 Gene3D G3DSA:3.30.559.10 324 552 6.7E-86 T 20-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 PANTHER PTHR23151 24 552 3.0E-193 T 20-04-2016 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 Pfam PF02817 e3 binding domain 273 308 3.5E-14 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 PANTHER PTHR23151:SF9 24 552 3.0E-193 T 20-04-2016 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 Gene3D G3DSA:2.40.50.100 136 226 6.1E-32 T 20-04-2016 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 Gene3D G3DSA:2.40.50.100 1 93 1.4E-32 T 20-04-2016 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 160 189 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 SUPERFAMILY SSF47005 266 310 3.92E-12 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 138 553 4.1E-136 T 20-04-2016 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 SUPERFAMILY SSF52777 329 552 4.89E-82 T 20-04-2016 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 SUPERFAMILY SSF51230 135 227 1.11E-27 T 20-04-2016 IPR011053 Single hybrid motif APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 329 552 7.3E-86 T 20-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APS56_RS06730 d124e4c03fd00c4ef22f278f589781c3 553 SUPERFAMILY SSF51230 1 86 9.03E-27 T 20-04-2016 IPR011053 Single hybrid motif APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 Gene3D G3DSA:3.40.50.2300 58 178 9.6E-42 T 20-04-2016 APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 SUPERFAMILY SSF47413 4 63 5.63E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 Gene3D G3DSA:3.40.50.2300 179 317 4.7E-46 T 20-04-2016 APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 SMART SM00354 5 75 9.7E-24 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 Pfam PF13377 Periplasmic binding protein-like domain 174 338 5.3E-34 T 20-04-2016 APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 PANTHER PTHR30146 5 338 1.0E-107 T 20-04-2016 APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 SUPERFAMILY SSF53822 64 338 1.94E-71 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 4.1E-13 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS06305 2ee1aca98762d75a81fc6689d339def0 340 Gene3D G3DSA:1.10.260.40 6 57 1.8E-20 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS08515 9bc593ee372bb2d4233d4cf4f4ca0964 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 181 360 9.8E-25 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APS56_RS08515 9bc593ee372bb2d4233d4cf4f4ca0964 364 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 8 51 5.4E-7 T 20-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APS56_RS08515 9bc593ee372bb2d4233d4cf4f4ca0964 364 Gene3D G3DSA:1.10.3720.10 157 361 6.6E-25 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APS56_RS08515 9bc593ee372bb2d4233d4cf4f4ca0964 364 PANTHER PTHR30465:SF2 146 361 3.2E-94 T 20-04-2016 APS56_RS08515 9bc593ee372bb2d4233d4cf4f4ca0964 364 PANTHER PTHR30465:SF2 1 80 3.2E-94 T 20-04-2016 APS56_RS08515 9bc593ee372bb2d4233d4cf4f4ca0964 364 SUPERFAMILY SSF161098 158 337 8.9E-26 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APS56_RS08515 9bc593ee372bb2d4233d4cf4f4ca0964 364 PANTHER PTHR30465 146 361 3.2E-94 T 20-04-2016 APS56_RS08515 9bc593ee372bb2d4233d4cf4f4ca0964 364 PANTHER PTHR30465 1 80 3.2E-94 T 20-04-2016 APS56_RS10775 27be17ff99b51fbefc5d4bd519a82ce2 320 Gene3D G3DSA:3.40.50.1820 24 301 6.8E-47 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS10775 27be17ff99b51fbefc5d4bd519a82ce2 320 PANTHER PTHR40111:SF1 7 318 9.5E-31 T 20-04-2016 APS56_RS10775 27be17ff99b51fbefc5d4bd519a82ce2 320 SUPERFAMILY SSF53474 20 313 1.93E-26 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS10775 27be17ff99b51fbefc5d4bd519a82ce2 320 PANTHER PTHR40111 7 318 9.5E-31 T 20-04-2016 APS56_RS10775 27be17ff99b51fbefc5d4bd519a82ce2 320 Pfam PF05448 Acetyl xylan esterase (AXE1) 23 307 1.6E-37 T 20-04-2016 IPR008391 Acetyl xylan esterase APS56_RS02205 6d854c6193866304d032de0418859d7d 502 Gene3D G3DSA:3.40.50.980 152 320 1.5E-35 T 20-04-2016 APS56_RS02205 6d854c6193866304d032de0418859d7d 502 Pfam PF00501 AMP-binding enzyme 13 408 1.2E-68 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APS56_RS02205 6d854c6193866304d032de0418859d7d 502 PANTHER PTHR24095 4 489 3.0E-98 T 20-04-2016 APS56_RS02205 6d854c6193866304d032de0418859d7d 502 SUPERFAMILY SSF56801 6 499 1.96E-98 T 20-04-2016 APS56_RS02205 6d854c6193866304d032de0418859d7d 502 Gene3D G3DSA:3.40.50.980 4 151 3.8E-25 T 20-04-2016 APS56_RS02205 6d854c6193866304d032de0418859d7d 502 Gene3D G3DSA:2.30.38.10 321 401 7.1E-19 T 20-04-2016 APS56_RS02205 6d854c6193866304d032de0418859d7d 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 146 157 - T 20-04-2016 IPR020845 AMP-binding, conserved site APS56_RS02205 6d854c6193866304d032de0418859d7d 502 Gene3D G3DSA:3.30.300.30 402 498 4.4E-21 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 SUPERFAMILY SSF56935 816 860 2.43E-92 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 SUPERFAMILY SSF56935 293 381 2.43E-92 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 SUPERFAMILY SSF56935 410 749 2.43E-92 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 SUPERFAMILY SSF56935 105 249 2.43E-92 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 SUPERFAMILY SSF56935 893 976 2.43E-92 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 201 231 3.8E-16 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 Gene3D G3DSA:2.170.130.10 113 226 1.0E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 Gene3D G3DSA:2.60.40.1120 29 112 5.3E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 SUPERFAMILY SSF49464 27 107 5.1E-20 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 Pfam PF07715 TonB-dependent Receptor Plug Domain 117 225 7.8E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 PANTHER PTHR11532 419 977 1.4E-248 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 PANTHER PTHR11532 1 347 1.4E-248 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 Gene3D G3DSA:2.40.170.20 825 977 1.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 Gene3D G3DSA:2.40.170.20 302 762 1.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 Gene3D G3DSA:2.40.170.20 227 251 1.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 PANTHER PTHR11532:SF57 419 977 1.4E-248 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 PANTHER PTHR11532:SF57 1 347 1.4E-248 T 20-04-2016 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 28 979 1.4E-254 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS09945 2b6f90cdcd6901ba30b0f63fcb0053b2 979 Pfam PF13715 CarboxypepD_reg-like domain 29 109 2.9E-21 T 20-04-2016 APS56_RS08510 aca4a7e83066447675691c349fa04af8 203 PANTHER PTHR11649:SF49 2 188 2.2E-57 T 20-04-2016 APS56_RS08510 aca4a7e83066447675691c349fa04af8 203 SUPERFAMILY SSF52540 14 194 8.01E-36 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08510 aca4a7e83066447675691c349fa04af8 203 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 195 26.492 T 20-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APS56_RS08510 aca4a7e83066447675691c349fa04af8 203 Gene3D G3DSA:3.40.50.300 3 194 2.5E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08510 aca4a7e83066447675691c349fa04af8 203 PANTHER PTHR11649 2 188 2.2E-57 T 20-04-2016 APS56_RS08510 aca4a7e83066447675691c349fa04af8 203 Pfam PF01926 50S ribosome-binding GTPase 26 143 1.6E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS08510 aca4a7e83066447675691c349fa04af8 203 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 6 191 5.1E-67 T 20-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APS56_RS06385 f30a92c5e9705350c3a7cc325361f5e8 129 SUPERFAMILY SSF48403 40 123 3.58E-21 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS06385 f30a92c5e9705350c3a7cc325361f5e8 129 SMART SM00248 37 66 1.1 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS06385 f30a92c5e9705350c3a7cc325361f5e8 129 SMART SM00248 69 98 6.9E-6 T 20-04-2016 IPR002110 Ankyrin repeat GO:0005515 APS56_RS06385 f30a92c5e9705350c3a7cc325361f5e8 129 Pfam PF12796 Ankyrin repeats (3 copies) 46 122 3.9E-13 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS06385 f30a92c5e9705350c3a7cc325361f5e8 129 Gene3D G3DSA:1.25.40.20 41 125 1.1E-19 T 20-04-2016 IPR020683 Ankyrin repeat-containing domain APS56_RS06385 f30a92c5e9705350c3a7cc325361f5e8 129 PANTHER PTHR24182 40 122 3.3E-17 T 20-04-2016 APS56_RS04950 0a9d121f1e887d55daa2ce6abbf51cda 161 Gene3D G3DSA:3.40.30.10 5 158 1.7E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS04950 0a9d121f1e887d55daa2ce6abbf51cda 161 SUPERFAMILY SSF52833 5 146 2.22E-17 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS04950 0a9d121f1e887d55daa2ce6abbf51cda 161 Pfam PF13905 Thioredoxin-like 54 144 3.7E-11 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 PANTHER PTHR19139 1 228 4.8E-73 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 PANTHER PTHR19139:SF103 1 228 4.8E-73 T 20-04-2016 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 Gene3D G3DSA:1.20.1080.10 1 227 2.9E-66 T 20-04-2016 IPR023271 Aquaporin-like APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.3E-49 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 PRINTS PR00783 Major intrinsic protein family signature 42 66 2.3E-49 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 PRINTS PR00783 Major intrinsic protein family signature 165 187 2.3E-49 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 PRINTS PR00783 Major intrinsic protein family signature 79 98 2.3E-49 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 PRINTS PR00783 Major intrinsic protein family signature 204 224 2.3E-49 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 PRINTS PR00783 Major intrinsic protein family signature 135 153 2.3E-49 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 ProSitePatterns PS00221 MIP family signature. 60 68 - T 20-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 220 8.3E-58 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 SUPERFAMILY SSF81338 1 226 1.05E-64 T 20-04-2016 IPR023271 Aquaporin-like APS56_RS14750 8a22d46ac80809e0da18332fbeacc59b 228 Pfam PF00230 Major intrinsic protein 2 221 1.5E-48 T 20-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APS56_RS04135 49da6e760a0c80775f798d3930bbace0 279 SUPERFAMILY SSF48576 12 276 9.49E-65 T 20-04-2016 IPR008949 Isoprenoid synthase domain APS56_RS04135 49da6e760a0c80775f798d3930bbace0 279 Pfam PF00494 Squalene/phytoene synthase 18 259 1.7E-40 T 20-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 APS56_RS04135 49da6e760a0c80775f798d3930bbace0 279 PANTHER PTHR31480:SF0 13 277 1.6E-41 T 20-04-2016 APS56_RS04135 49da6e760a0c80775f798d3930bbace0 279 PANTHER PTHR31480 13 277 1.6E-41 T 20-04-2016 APS56_RS04135 49da6e760a0c80775f798d3930bbace0 279 Gene3D G3DSA:1.10.600.10 7 277 1.4E-54 T 20-04-2016 IPR008949 Isoprenoid synthase domain APS56_RS04135 49da6e760a0c80775f798d3930bbace0 279 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 162 188 - T 20-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 APS56_RS01295 7aec8a2aad1a5b244a3e9f8dba2bc3d4 280 Gene3D G3DSA:1.10.443.10 107 272 3.1E-48 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS01295 7aec8a2aad1a5b244a3e9f8dba2bc3d4 280 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 12 80 9.2E-7 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APS56_RS01295 7aec8a2aad1a5b244a3e9f8dba2bc3d4 280 PANTHER PTHR30349:SF5 13 278 8.8E-61 T 20-04-2016 APS56_RS01295 7aec8a2aad1a5b244a3e9f8dba2bc3d4 280 PANTHER PTHR30349 13 278 8.8E-61 T 20-04-2016 APS56_RS01295 7aec8a2aad1a5b244a3e9f8dba2bc3d4 280 SUPERFAMILY SSF56349 13 272 5.89E-51 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS01295 7aec8a2aad1a5b244a3e9f8dba2bc3d4 280 Pfam PF00589 Phage integrase family 107 266 2.0E-43 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 Gene3D G3DSA:2.40.170.20 544 876 6.4E-91 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 Gene3D G3DSA:2.40.170.20 251 500 6.4E-91 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 Pfam PF07715 TonB-dependent Receptor Plug Domain 137 230 1.5E-14 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 Gene3D G3DSA:2.60.40.1120 24 114 4.8E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 Gene3D G3DSA:2.170.130.10 128 247 1.5E-24 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 PANTHER PTHR32552:SF10 431 541 1.9E-85 T 20-04-2016 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 PANTHER PTHR32552:SF10 579 876 1.9E-85 T 20-04-2016 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 PANTHER PTHR32552:SF10 144 405 1.9E-85 T 20-04-2016 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 PANTHER PTHR32552 431 541 1.9E-85 T 20-04-2016 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 PANTHER PTHR32552 579 876 1.9E-85 T 20-04-2016 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 PANTHER PTHR32552 144 405 1.9E-85 T 20-04-2016 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 SUPERFAMILY SSF49464 21 108 2.04E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 Pfam PF13715 CarboxypepD_reg-like domain 24 109 1.7E-20 T 20-04-2016 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 SUPERFAMILY SSF56935 104 497 6.15E-104 T 20-04-2016 APS56_RS14885 44f8184825d3ca3edc2a2cfdc36e27ff 876 SUPERFAMILY SSF56935 548 876 6.15E-104 T 20-04-2016 APS56_RS07915 ef0c1a78c0071defcc532eb47dcdcfb6 296 Gene3D G3DSA:2.70.98.10 47 293 3.6E-32 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS07915 ef0c1a78c0071defcc532eb47dcdcfb6 296 PANTHER PTHR10091 54 199 1.3E-16 T 20-04-2016 APS56_RS07915 ef0c1a78c0071defcc532eb47dcdcfb6 296 SUPERFAMILY SSF74650 27 292 2.13E-49 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS07915 ef0c1a78c0071defcc532eb47dcdcfb6 296 PANTHER PTHR10091:SF5 54 199 1.3E-16 T 20-04-2016 APS56_RS07915 ef0c1a78c0071defcc532eb47dcdcfb6 296 Pfam PF01263 Aldose 1-epimerase 29 288 1.6E-43 T 20-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APS56_RS03950 cfaafc4a4d621cbb671afc968257e847 524 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 344 511 1.3E-43 T 20-04-2016 IPR032288 Calcineurin-like phosphoesterase, C-terminal APS56_RS03950 cfaafc4a4d621cbb671afc968257e847 524 Gene3D G3DSA:3.60.21.10 129 399 1.8E-35 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS03950 cfaafc4a4d621cbb671afc968257e847 524 PANTHER PTHR22953 178 324 6.9E-17 T 20-04-2016 APS56_RS03950 cfaafc4a4d621cbb671afc968257e847 524 PANTHER PTHR22953:SF27 178 324 6.9E-17 T 20-04-2016 APS56_RS03950 cfaafc4a4d621cbb671afc968257e847 524 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 40 100 2.2E-13 T 20-04-2016 IPR032285 Calcineurin-like phosphoesterase, N-terminal APS56_RS03950 cfaafc4a4d621cbb671afc968257e847 524 SUPERFAMILY SSF56300 133 402 1.39E-36 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS03950 cfaafc4a4d621cbb671afc968257e847 524 Pfam PF00149 Calcineurin-like phosphoesterase 135 324 8.5E-9 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 160 2.6E-28 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 SUPERFAMILY SSF53671 1 314 9.04E-61 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 Gene3D G3DSA:3.40.50.1370 157 299 1.1E-41 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 PANTHER PTHR11405:SF1 9 314 3.3E-69 T 20-04-2016 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 269 274 8.4E-5 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 8.4E-5 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 PRINTS PR00101 Aspartate carbamoyltransferase signature 146 163 8.4E-5 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 Gene3D G3DSA:3.40.50.1370 1 156 2.1E-47 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 8.3E-12 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 277 300 8.3E-12 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 8.3E-12 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 PANTHER PTHR11405 9 314 3.3E-69 T 20-04-2016 APS56_RS07480 bcd4891ec17b99669a6c07b6d578f3fb 315 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 182 308 2.2E-22 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APS56_RS13015 e559e410aa8c9a95df9ce577e1041d1f 297 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 13 295 15.968 T 20-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APS56_RS13015 e559e410aa8c9a95df9ce577e1041d1f 297 PANTHER PTHR11048:SF3 14 286 1.2E-73 T 20-04-2016 APS56_RS13015 e559e410aa8c9a95df9ce577e1041d1f 297 Pfam PF01040 UbiA prenyltransferase family 30 276 1.3E-51 T 20-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APS56_RS13015 e559e410aa8c9a95df9ce577e1041d1f 297 PANTHER PTHR11048 14 286 1.2E-73 T 20-04-2016 APS56_RS13015 e559e410aa8c9a95df9ce577e1041d1f 297 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 16 294 6.0E-72 T 20-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APS56_RS13015 e559e410aa8c9a95df9ce577e1041d1f 297 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 20-04-2016 IPR030470 UbiA prenyltransferase conserved site APS56_RS03935 908113891fea40b95c6a6915e84f0049 307 Pfam PF16344 Domain of unknown function (DUF4974) 203 295 6.4E-17 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS03935 908113891fea40b95c6a6915e84f0049 307 Pfam PF04773 FecR protein 97 189 1.0E-20 T 20-04-2016 IPR006860 FecR protein APS56_RS03935 908113891fea40b95c6a6915e84f0049 307 PIRSF PIRSF018266 3 306 5.7E-62 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS03935 908113891fea40b95c6a6915e84f0049 307 PANTHER PTHR30273:SF2 21 307 3.9E-61 T 20-04-2016 APS56_RS03935 908113891fea40b95c6a6915e84f0049 307 PANTHER PTHR30273 21 307 3.9E-61 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS00185 59522d8b58d36b1ac842b96ee3dd95da 225 Pfam PF13483 Beta-lactamase superfamily domain 2 175 6.7E-19 T 20-04-2016 APS56_RS00185 59522d8b58d36b1ac842b96ee3dd95da 225 SUPERFAMILY SSF56281 1 223 4.19E-32 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS00185 59522d8b58d36b1ac842b96ee3dd95da 225 PANTHER PTHR15032 1 225 7.1E-46 T 20-04-2016 APS56_RS00185 59522d8b58d36b1ac842b96ee3dd95da 225 PANTHER PTHR15032:SF13 1 225 7.1E-46 T 20-04-2016 APS56_RS00185 59522d8b58d36b1ac842b96ee3dd95da 225 SMART SM00849 7 189 3.3E-5 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS00185 59522d8b58d36b1ac842b96ee3dd95da 225 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 225 32.07 T 20-04-2016 IPR022877 Protein of unknown funcion UPF0173 APS56_RS00185 59522d8b58d36b1ac842b96ee3dd95da 225 Gene3D G3DSA:3.60.15.10 1 225 4.1E-49 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS11390 0bb1d883c907081c177dea3a7a4d7012 308 PANTHER PTHR10584 1 282 1.3E-63 T 20-04-2016 APS56_RS11390 0bb1d883c907081c177dea3a7a4d7012 308 Gene3D G3DSA:3.40.1190.20 1 294 2.4E-59 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS11390 0bb1d883c907081c177dea3a7a4d7012 308 Pfam PF00294 pfkB family carbohydrate kinase 1 280 3.6E-34 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APS56_RS11390 0bb1d883c907081c177dea3a7a4d7012 308 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 232 245 - T 20-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APS56_RS11390 0bb1d883c907081c177dea3a7a4d7012 308 SUPERFAMILY SSF53613 1 284 9.54E-63 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS11390 0bb1d883c907081c177dea3a7a4d7012 308 PANTHER PTHR10584:SF179 1 282 1.3E-63 T 20-04-2016 APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 Gene3D G3DSA:3.30.565.10 235 249 3.5E-63 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 Gene3D G3DSA:3.30.565.10 3 203 3.5E-63 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PANTHER PTHR11528:SF44 16 611 8.3E-142 T 20-04-2016 APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PIRSF PIRSF002583 1 636 5.4E-148 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 SUPERFAMILY SSF54211 243 494 9.1E-59 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 20-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PRINTS PR00775 90kDa heat shock protein signature 165 182 2.4E-38 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PRINTS PR00775 90kDa heat shock protein signature 183 201 2.4E-38 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PRINTS PR00775 90kDa heat shock protein signature 89 106 2.4E-38 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PRINTS PR00775 90kDa heat shock protein signature 115 137 2.4E-38 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PRINTS PR00775 90kDa heat shock protein signature 71 88 2.4E-38 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PRINTS PR00775 90kDa heat shock protein signature 23 45 2.4E-38 T 20-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 SUPERFAMILY SSF55874 2 209 2.46E-56 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 Pfam PF00183 Hsp90 protein 179 636 3.2E-46 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 PANTHER PTHR11528 16 611 8.3E-142 T 20-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APS56_RS05035 e688da5ea3fbdc1fe350d7873d0de0fc 636 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 150 1.1E-11 T 20-04-2016 APS56_RS16555 eacb1e3c3975143c93af21c19f7bfc7b 78 SUPERFAMILY SSF143800 2 75 1.18E-27 T 20-04-2016 APS56_RS16555 eacb1e3c3975143c93af21c19f7bfc7b 78 Gene3D G3DSA:2.30.170.40 2 75 2.6E-33 T 20-04-2016 APS56_RS16555 eacb1e3c3975143c93af21c19f7bfc7b 78 PANTHER PTHR13528 1 71 9.6E-28 T 20-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APS56_RS16555 eacb1e3c3975143c93af21c19f7bfc7b 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 71 19.7 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS16555 eacb1e3c3975143c93af21c19f7bfc7b 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 7.5E-28 T 20-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS16555 eacb1e3c3975143c93af21c19f7bfc7b 78 Pfam PF00830 Ribosomal L28 family 3 61 4.0E-26 T 20-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 PRINTS PR00149 Fumarate lyase superfamily signature 293 309 3.6E-17 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 3.6E-17 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 PRINTS PR00149 Fumarate lyase superfamily signature 161 179 3.6E-17 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 PRINTS PR00149 Fumarate lyase superfamily signature 250 277 3.6E-17 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 PANTHER PTHR11444:SF17 4 447 3.7E-185 T 20-04-2016 APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 ProSitePatterns PS00163 Fumarate lyases signature. 293 302 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 Gene3D G3DSA:1.10.40.30 389 445 3.1E-26 T 20-04-2016 APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 Gene3D G3DSA:1.20.200.10 118 388 3.5E-73 T 20-04-2016 APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 446 1.8E-114 T 20-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 SUPERFAMILY SSF48557 4 446 1.24E-89 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 Pfam PF08328 Adenylosuccinate lyase C-terminal 330 445 1.8E-48 T 20-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 Pfam PF00206 Lyase 14 311 4.2E-47 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 Gene3D G3DSA:1.10.275.10 1 117 1.1E-44 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal APS56_RS15355 6a50b522a6b3db776e3cd8a1e785b9bf 447 PANTHER PTHR11444 4 447 3.7E-185 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 Pfam PF01344 Kelch motif 244 286 3.1E-4 T 20-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 Pfam PF13415 Galactose oxidase, central domain 57 102 4.2E-6 T 20-04-2016 APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 Pfam PF13415 Galactose oxidase, central domain 105 140 3.7E-5 T 20-04-2016 APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 Gene3D G3DSA:2.130.10.80 36 143 4.3E-11 T 20-04-2016 IPR015916 Galactose oxidase, beta-propeller APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 SUPERFAMILY SSF69322 201 318 5.49E-5 T 20-04-2016 APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 Gene3D G3DSA:2.120.10.80 151 324 4.0E-25 T 20-04-2016 IPR015915 Kelch-type beta propeller GO:0005515 APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 PANTHER PTHR24412:SF254 55 320 2.1E-15 T 20-04-2016 APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 SUPERFAMILY SSF117281 43 233 1.83E-34 T 20-04-2016 APS56_RS01320 2e93e1383f7053d4029b9be785f40846 331 PANTHER PTHR24412 55 320 2.1E-15 T 20-04-2016 APS56_RS08820 d5735567d4ecf9259db258ff90db313e 204 Gene3D G3DSA:4.10.860.10 172 202 1.7E-6 T 20-04-2016 IPR001943 UVR domain GO:0005515 APS56_RS08820 d5735567d4ecf9259db258ff90db313e 204 PANTHER PTHR15160 14 203 4.2E-37 T 20-04-2016 APS56_RS08820 d5735567d4ecf9259db258ff90db313e 204 PANTHER PTHR15160:SF1 14 203 4.2E-37 T 20-04-2016 APS56_RS08820 d5735567d4ecf9259db258ff90db313e 204 SUPERFAMILY SSF103256 3 142 8.37E-41 T 20-04-2016 IPR003729 Bifunctional nuclease domain GO:0004518 APS56_RS08820 d5735567d4ecf9259db258ff90db313e 204 Pfam PF02577 Bifunctional nuclease 8 135 1.1E-43 T 20-04-2016 IPR003729 Bifunctional nuclease domain GO:0004518 APS56_RS08820 d5735567d4ecf9259db258ff90db313e 204 SUPERFAMILY SSF46600 171 202 3.14E-5 T 20-04-2016 IPR001943 UVR domain GO:0005515 APS56_RS08820 d5735567d4ecf9259db258ff90db313e 204 Pfam PF02151 UvrB/uvrC motif 173 203 1.3E-9 T 20-04-2016 IPR001943 UVR domain GO:0005515 APS56_RS06840 bafc75741ac152677f32e8d7bb8b5969 108 Pfam PF12840 Helix-turn-helix domain 6 64 2.2E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06840 bafc75741ac152677f32e8d7bb8b5969 108 SMART SM00418 6 87 8.2E-19 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS06840 bafc75741ac152677f32e8d7bb8b5969 108 PANTHER PTHR33154 6 99 7.4E-18 T 20-04-2016 APS56_RS06840 bafc75741ac152677f32e8d7bb8b5969 108 SUPERFAMILY SSF46785 6 96 2.4E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06840 bafc75741ac152677f32e8d7bb8b5969 108 Gene3D G3DSA:1.10.10.10 6 105 2.3E-27 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06840 bafc75741ac152677f32e8d7bb8b5969 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 8.4E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS06840 bafc75741ac152677f32e8d7bb8b5969 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 8.4E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS06840 bafc75741ac152677f32e8d7bb8b5969 108 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 8.4E-10 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 2 585 29.404 T 20-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 Gene3D G3DSA:3.40.50.970 5 140 8.4E-46 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 Gene3D G3DSA:3.40.50.970 174 207 8.4E-46 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 SUPERFAMILY SSF52518 174 209 7.94E-31 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 SUPERFAMILY SSF52518 4 135 7.94E-31 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 Pfam PF16582 Middle domain of thiamine pyrophosphate 234 365 3.6E-8 T 20-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 Gene3D G3DSA:3.40.50.970 380 572 2.9E-20 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 426 566 4.5E-7 T 20-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 PIRSF PIRSF004983 2 586 1.2E-139 T 20-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 SUPERFAMILY SSF52518 397 572 4.29E-24 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 PANTHER PTHR18968:SF114 151 586 2.9E-127 T 20-04-2016 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 PANTHER PTHR18968:SF114 9 134 2.9E-127 T 20-04-2016 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 205 1.3E-29 T 20-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 PANTHER PTHR18968 151 586 2.9E-127 T 20-04-2016 APS56_RS01350 21bc8838fd5b74500852b8625ffc3939 586 PANTHER PTHR18968 9 134 2.9E-127 T 20-04-2016 APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 Gene3D G3DSA:1.10.3210.10 318 499 9.0E-42 T 20-04-2016 IPR006674 HD domain APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 Gene3D G3DSA:3.30.1370.10 222 300 4.5E-6 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 SUPERFAMILY SSF109604 314 474 3.87E-27 T 20-04-2016 APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 PANTHER PTHR12826 223 523 2.3E-126 T 20-04-2016 APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 SMART SM00471 334 442 2.5E-10 T 20-04-2016 IPR003607 HD/PDEase domain APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 SMART SM00322 210 302 7.3E-4 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 Hamap MF_00335 Ribonuclease Y [rny]. 3 524 22.696 T 20-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 Pfam PF12072 Domain of unknown function (DUF3552) 13 205 9.2E-32 T 20-04-2016 IPR022711 Ribonuclease Y, N-terminal APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 SUPERFAMILY SSF54791 212 299 1.49E-13 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 Pfam PF00013 KH domain 223 255 1.5E-5 T 20-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 TIGRFAM TIGR00277 HDIG: HDIG domain 334 412 2.0E-20 T 20-04-2016 IPR006675 HDIG domain APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 Pfam PF01966 HD domain 339 431 5.5E-17 T 20-04-2016 IPR006674 HD domain APS56_RS03320 f632f1ba79b933b372373e8d2c77c5f8 524 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 13 524 4.5E-189 T 20-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 APS56_RS11135 01f3192178c9f6e3e6cd6c168dccd4b8 134 SUPERFAMILY SSF89919 5 116 9.94E-27 T 20-04-2016 IPR023799 Ribosome-binding factor A domain APS56_RS11135 01f3192178c9f6e3e6cd6c168dccd4b8 134 Gene3D G3DSA:3.30.300.20 5 107 2.0E-25 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS11135 01f3192178c9f6e3e6cd6c168dccd4b8 134 PANTHER PTHR33515 6 113 5.1E-25 T 20-04-2016 APS56_RS11135 01f3192178c9f6e3e6cd6c168dccd4b8 134 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 7 113 6.7E-18 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APS56_RS11135 01f3192178c9f6e3e6cd6c168dccd4b8 134 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 13 102 8.0E-16 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APS56_RS11135 01f3192178c9f6e3e6cd6c168dccd4b8 134 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 5 119 15.777 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APS56_RS11135 01f3192178c9f6e3e6cd6c168dccd4b8 134 Pfam PF02033 Ribosome-binding factor A 9 114 1.4E-23 T 20-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PRINTS PR00959 Mevalonate kinase family signature 327 344 9.6E-40 T 20-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PRINTS PR00959 Mevalonate kinase family signature 118 140 9.6E-40 T 20-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PRINTS PR00959 Mevalonate kinase family signature 161 180 9.6E-40 T 20-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PRINTS PR00959 Mevalonate kinase family signature 26 50 9.6E-40 T 20-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 120 131 - T 20-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 Gene3D G3DSA:3.30.230.10 5 208 3.5E-65 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PRINTS PR00473 Galactokinase signature 263 277 2.5E-21 T 20-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PRINTS PR00473 Galactokinase signature 28 46 2.5E-21 T 20-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PRINTS PR00473 Galactokinase signature 91 102 2.5E-21 T 20-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PRINTS PR00473 Galactokinase signature 111 129 2.5E-21 T 20-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 Pfam PF10509 Galactokinase galactose-binding signature 12 58 7.3E-22 T 20-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 Pfam PF00288 GHMP kinases N terminal domain 114 180 1.1E-13 T 20-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 TIGRFAM TIGR00131 gal_kin: galactokinase 7 379 6.2E-94 T 20-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 Pfam PF08544 GHMP kinases C terminal 282 361 1.3E-9 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 SUPERFAMILY SSF55060 204 380 7.67E-42 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 SUPERFAMILY SSF54211 4 202 9.11E-55 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PANTHER PTHR10457 2 364 3.6E-111 T 20-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 Gene3D G3DSA:3.30.70.890 209 378 3.3E-50 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 ProSitePatterns PS00106 Galactokinase signature. 28 39 - T 20-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PIRSF PIRSF000530 1 381 3.6E-110 T 20-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07910 fc713c057b930e8bdf15124942775d24 381 PANTHER PTHR10457:SF6 2 364 3.6E-111 T 20-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS11745 ad8e8761f06b00985dead5ab0e86cbfc 223 Gene3D G3DSA:1.20.950.10 16 218 8.4E-12 T 20-04-2016 APS56_RS11745 ad8e8761f06b00985dead5ab0e86cbfc 223 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 7 218 5.6E-47 T 20-04-2016 IPR011138 Succinate dehydrogenase cytochrome b558 subunit UniPathway: UPA00223 APS56_RS11745 ad8e8761f06b00985dead5ab0e86cbfc 223 SUPERFAMILY SSF81343 3 222 5.67E-37 T 20-04-2016 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 SUPERFAMILY SSF51445 171 495 4.92E-57 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Gene3D G3DSA:2.60.40.1560 501 593 2.0E-24 T 20-04-2016 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PANTHER PTHR10066 441 904 4.1E-128 T 20-04-2016 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PANTHER PTHR10066 405 420 4.1E-128 T 20-04-2016 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PANTHER PTHR10066 4 370 4.1E-128 T 20-04-2016 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Pfam PF00703 Glycosyl hydrolases family 2 76 174 9.3E-17 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 SUPERFAMILY SSF49785 3 79 3.12E-11 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Gene3D G3DSA:3.20.20.80 181 392 1.5E-62 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Gene3D G3DSA:3.20.20.80 427 498 1.5E-62 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Pfam PF16355 Domain of unknown function (DUF4982) 515 576 2.2E-23 T 20-04-2016 IPR032311 Domain of unknown function DUF4982 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 183 342 4.3E-30 T 20-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Gene3D G3DSA:2.60.120.260 2 56 2.6E-10 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Pfam PF13287 Fn3 associated 710 753 1.6E-10 T 20-04-2016 IPR026876 Fn3 associated repeat APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Gene3D G3DSA:2.60.120.260 782 904 2.8E-5 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PANTHER PTHR10066:SF71 441 904 4.1E-128 T 20-04-2016 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PANTHER PTHR10066:SF71 405 420 4.1E-128 T 20-04-2016 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PANTHER PTHR10066:SF71 4 370 4.1E-128 T 20-04-2016 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 SUPERFAMILY SSF49785 782 903 9.52E-8 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PRINTS PR00132 Glycosyl hydrolase family 2 signature 186 200 1.0E-9 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PRINTS PR00132 Glycosyl hydrolase family 2 signature 287 302 1.0E-9 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 PRINTS PR00132 Glycosyl hydrolase family 2 signature 217 235 1.0E-9 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 Gene3D G3DSA:2.60.40.320 57 174 1.4E-26 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS15545 9c79a62685bf99b32e35e92cde49d120 905 SUPERFAMILY SSF49303 85 174 1.58E-14 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS01810 5aaa4660f58f75b96b7a35ee22b3a341 360 Gene3D G3DSA:1.20.1090.10 187 359 1.4E-20 T 20-04-2016 APS56_RS01810 5aaa4660f58f75b96b7a35ee22b3a341 360 SUPERFAMILY SSF56796 2 359 1.26E-68 T 20-04-2016 APS56_RS01810 5aaa4660f58f75b96b7a35ee22b3a341 360 PANTHER PTHR11496 1 340 1.9E-91 T 20-04-2016 APS56_RS01810 5aaa4660f58f75b96b7a35ee22b3a341 360 PANTHER PTHR11496:SF68 1 340 1.9E-91 T 20-04-2016 APS56_RS01810 5aaa4660f58f75b96b7a35ee22b3a341 360 Gene3D G3DSA:3.40.50.1970 1 185 6.5E-38 T 20-04-2016 APS56_RS01810 5aaa4660f58f75b96b7a35ee22b3a341 360 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 292 6.2E-53 T 20-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 9.9E-14 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 9.9E-14 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 9.9E-14 T 20-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 PANTHER PTHR30154 1 123 5.6E-35 T 20-04-2016 APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 SMART SM00344 3 109 9.7E-34 T 20-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 Gene3D G3DSA:3.30.70.920 56 125 3.8E-13 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 2.2E-15 T 20-04-2016 APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 Pfam PF01037 Lrp/AsnC ligand binding domain 77 135 3.8E-12 T 20-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 20-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 SUPERFAMILY SSF54909 65 138 1.77E-14 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 SUPERFAMILY SSF46785 2 63 1.01E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS04485 dc44b123e4eb89311becef4484286aa0 146 Gene3D G3DSA:1.10.10.10 1 53 4.3E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 Gene3D G3DSA:2.40.30.10 158 205 1.4E-9 T 20-04-2016 APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 Gene3D G3DSA:2.40.30.10 3 32 1.4E-9 T 20-04-2016 APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 PANTHER PTHR11229 1 204 2.6E-103 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 SUPERFAMILY SSF50447 2 205 1.59E-72 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 205 35.398 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 Gene3D G3DSA:4.10.960.10 77 157 1.2E-28 T 20-04-2016 APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 20-04-2016 IPR019926 Ribosomal protein L3, conserved site APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 Pfam PF00297 Ribosomal protein L3 95 182 4.4E-15 T 20-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13945 8f6cc020346d045e213fe9df4db15fe2 205 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 8.9E-81 T 20-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00400 9d11db8a4da7b1d6e3fbd3e7ea8d014b 401 Gene3D G3DSA:3.50.50.60 19 119 6.0E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00400 9d11db8a4da7b1d6e3fbd3e7ea8d014b 401 Gene3D G3DSA:3.50.50.60 346 399 6.0E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00400 9d11db8a4da7b1d6e3fbd3e7ea8d014b 401 Gene3D G3DSA:3.50.50.60 172 253 6.0E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00400 9d11db8a4da7b1d6e3fbd3e7ea8d014b 401 PANTHER PTHR13847 1 401 5.5E-97 T 20-04-2016 APS56_RS00400 9d11db8a4da7b1d6e3fbd3e7ea8d014b 401 SUPERFAMILY SSF51905 346 399 5.4E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00400 9d11db8a4da7b1d6e3fbd3e7ea8d014b 401 SUPERFAMILY SSF51905 29 254 5.4E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00400 9d11db8a4da7b1d6e3fbd3e7ea8d014b 401 Pfam PF01266 FAD dependent oxidoreductase 30 377 5.6E-42 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APS56_RS00400 9d11db8a4da7b1d6e3fbd3e7ea8d014b 401 PANTHER PTHR13847:SF201 1 401 5.5E-97 T 20-04-2016 APS56_RS12365 09baec666919caa452dac335342335f7 324 PANTHER PTHR33376 27 322 1.1E-98 T 20-04-2016 APS56_RS12365 09baec666919caa452dac335342335f7 324 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 308 2.0E-79 T 20-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 APS56_RS12365 09baec666919caa452dac335342335f7 324 PANTHER PTHR33376:SF6 27 322 1.1E-98 T 20-04-2016 APS56_RS12365 09baec666919caa452dac335342335f7 324 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 30 275 1.5E-71 T 20-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APS56_RS12365 09baec666919caa452dac335342335f7 324 PIRSF PIRSF006470 1 323 2.3E-93 T 20-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 SMART SM00388 80 145 3.8E-17 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 Pfam PF00512 His Kinase A (phospho-acceptor) domain 85 144 7.2E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 Gene3D G3DSA:3.40.50.2300 331 454 3.7E-36 T 20-04-2016 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 SUPERFAMILY SSF52172 331 452 9.82E-34 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 SUPERFAMILY SSF47384 66 146 6.67E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 Gene3D G3DSA:3.30.565.10 147 310 1.7E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 SMART SM00387 194 310 2.4E-30 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 Gene3D G3DSA:1.10.287.130 75 141 4.9E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 SUPERFAMILY SSF55874 136 306 4.98E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 Pfam PF00072 Response regulator receiver domain 335 447 1.4E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 PANTHER PTHR24423 63 451 1.7E-107 T 20-04-2016 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 194 309 6.1E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 SMART SM00448 333 448 8.9E-33 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 307 4.1E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 263 4.1E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 235 249 4.1E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03670 050e59395942316df7cf0b074b046ad4 458 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 288 4.1E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 PANTHER PTHR11102 82 217 3.6E-14 T 20-04-2016 APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 PANTHER PTHR11102 384 406 3.6E-14 T 20-04-2016 APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 Pfam PF08238 Sel1 repeat 137 153 16.0 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 Pfam PF08238 Sel1 repeat 96 119 0.12 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 Pfam PF08238 Sel1 repeat 378 396 79.0 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 Pfam PF08238 Sel1 repeat 174 195 3.8 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 SUPERFAMILY SSF81901 294 405 1.23E-17 T 20-04-2016 APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 SUPERFAMILY SSF81901 82 203 1.23E-17 T 20-04-2016 APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 Gene3D G3DSA:1.25.40.10 325 416 1.2E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 Gene3D G3DSA:1.25.40.10 69 195 1.2E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 SUPERFAMILY SSF57938 438 486 9.16E-5 T 20-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 SMART SM00671 168 203 19.0 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS01125 4e94a55940552767ed378a29b74237c1 512 SMART SM00671 95 130 0.03 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Gene3D G3DSA:1.25.10.10 478 536 9.2E-6 T 20-04-2016 IPR011989 Armadillo-like helical APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Gene3D G3DSA:1.25.40.10 537 741 7.2E-35 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Pfam PF13181 Tetratricopeptide repeat 568 595 0.0024 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Pfam PF13431 Tetratricopeptide repeat 621 653 1.0E-6 T 20-04-2016 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Pfam PF13435 Cytochrome c554 and c-prime 58 84 0.0016 T 20-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Pfam PF13435 Cytochrome c554 and c-prime 187 226 1.3E-4 T 20-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SMART SM00671 633 664 8.1 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SMART SM00671 565 596 21.0 T 20-04-2016 IPR006597 Sel1-like repeat APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 323 348 1.9E-4 T 20-04-2016 IPR010177 Doubled CXXCH motif UniPathway: UPA00045 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SMART SM00028 599 632 0.053 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SMART SM00028 633 666 0.64 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SMART SM00028 667 700 5.1 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SMART SM00028 565 598 7.5 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SMART SM00028 701 734 150.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SUPERFAMILY SSF48695 299 533 2.37E-60 T 20-04-2016 IPR011031 Multihaem cytochrome APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SUPERFAMILY SSF48695 120 266 2.37E-60 T 20-04-2016 IPR011031 Multihaem cytochrome APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SUPERFAMILY SSF48695 52 75 2.37E-60 T 20-04-2016 IPR011031 Multihaem cytochrome APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 SUPERFAMILY SSF48452 561 738 4.17E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Gene3D G3DSA:1.10.710.10 52 95 1.6E-37 T 20-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Gene3D G3DSA:1.10.710.10 179 270 1.6E-37 T 20-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 Gene3D G3DSA:1.10.710.10 309 413 1.6E-37 T 20-04-2016 IPR023155 Cytochrome c-552/4 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674|UniPathway: UPA00653 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 PANTHER PTHR23083 432 439 8.3E-24 T 20-04-2016 APS56_RS16580 a93628cc506ade66a92bae46d3756ad4 745 PANTHER PTHR23083 536 744 8.3E-24 T 20-04-2016 APS56_RS08870 6c424c74134f1c788da057305be3cc9e 186 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 94 106 0.0089 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS08870 6c424c74134f1c788da057305be3cc9e 186 SUPERFAMILY SSF51161 2 184 5.27E-50 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS08870 6c424c74134f1c788da057305be3cc9e 186 PANTHER PTHR23416 1 185 3.2E-86 T 20-04-2016 APS56_RS08870 6c424c74134f1c788da057305be3cc9e 186 Pfam PF12464 Maltose acetyltransferase 6 57 1.0E-12 T 20-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APS56_RS08870 6c424c74134f1c788da057305be3cc9e 186 SMART SM01266 4 58 8.7E-17 T 20-04-2016 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 APS56_RS08870 6c424c74134f1c788da057305be3cc9e 186 Gene3D G3DSA:2.160.10.10 2 184 1.4E-59 T 20-04-2016 APS56_RS08870 6c424c74134f1c788da057305be3cc9e 186 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 2.3E-11 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS08870 6c424c74134f1c788da057305be3cc9e 186 PANTHER PTHR23416:SF58 1 185 3.2E-86 T 20-04-2016 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 SUPERFAMILY SSF51735 233 374 1.97E-27 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 SUPERFAMILY SSF116726 362 448 3.14E-13 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 PANTHER PTHR13789 1 132 3.5E-39 T 20-04-2016 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 Gene3D G3DSA:3.30.70.1450 380 448 1.7E-7 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 PANTHER PTHR13789:SF225 1 132 3.5E-39 T 20-04-2016 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 Gene3D G3DSA:3.30.70.1450 153 226 2.1E-6 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 Gene3D G3DSA:3.40.50.720 233 374 4.1E-32 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 Gene3D G3DSA:3.40.50.720 1 149 2.1E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 Pfam PF02080 TrkA-C domain 156 225 1.6E-9 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 Pfam PF02080 TrkA-C domain 382 448 2.1E-14 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 SUPERFAMILY SSF116726 140 225 1.44E-8 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 PRINTS PR00335 TrkA potassium uptake protein signature 293 303 1.5E-11 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 PRINTS PR00335 TrkA potassium uptake protein signature 306 320 1.5E-11 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.5E-11 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.5E-11 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 PRINTS PR00335 TrkA potassium uptake protein signature 282 292 1.5E-11 T 20-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 SUPERFAMILY SSF51735 1 149 8.82E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 Pfam PF02254 TrkA-N domain 3 123 1.1E-24 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APS56_RS14345 e58fbbe0f9c74f82a26e84885be2fe5b 449 Pfam PF02254 TrkA-N domain 235 350 2.3E-18 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 SUPERFAMILY SSF53335 119 402 1.11E-65 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 Gene3D G3DSA:3.30.70.1170 153 208 5.2E-11 T 20-04-2016 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 Gene3D G3DSA:3.40.50.150 210 402 6.9E-54 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 239 4.16E-28 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 385 402 4.16E-28 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 200 214 4.16E-28 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 296 308 4.16E-28 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 346 362 4.16E-28 T 20-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 Pfam PF01189 16S rRNA methyltransferase RsmB/F 219 398 7.7E-43 T 20-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 PANTHER PTHR22807:SF33 119 402 4.7E-99 T 20-04-2016 APS56_RS07740 dad852bebf9426de91565bca62a9b223 404 PANTHER PTHR22807 119 402 4.7E-99 T 20-04-2016 APS56_RS13895 004925bc3dc2c7ac67c17674276257c1 243 Gene3D G3DSA:1.20.1540.10 20 185 3.9E-12 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS13895 004925bc3dc2c7ac67c17674276257c1 243 SUPERFAMILY SSF144091 18 189 2.22E-26 T 20-04-2016 APS56_RS13895 004925bc3dc2c7ac67c17674276257c1 243 Pfam PF01694 Rhomboid family 53 186 2.1E-15 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS13895 004925bc3dc2c7ac67c17674276257c1 243 PANTHER PTHR22936 36 228 2.7E-34 T 20-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APS56_RS13895 004925bc3dc2c7ac67c17674276257c1 243 PANTHER PTHR22936:SF11 36 228 2.7E-34 T 20-04-2016 APS56_RS02040 fa272eeb79fd1936207808d4dc253330 404 SUPERFAMILY SSF109604 2 403 2.97E-104 T 20-04-2016 APS56_RS02040 fa272eeb79fd1936207808d4dc253330 404 PANTHER PTHR11373:SF4 5 314 4.2E-66 T 20-04-2016 APS56_RS02040 fa272eeb79fd1936207808d4dc253330 404 SMART SM00471 50 175 7.3E-8 T 20-04-2016 IPR003607 HD/PDEase domain APS56_RS02040 fa272eeb79fd1936207808d4dc253330 404 Pfam PF01966 HD domain 54 130 5.8E-8 T 20-04-2016 IPR006674 HD domain APS56_RS02040 fa272eeb79fd1936207808d4dc253330 404 Gene3D G3DSA:1.10.3210.10 3 244 2.9E-75 T 20-04-2016 IPR006674 HD domain APS56_RS02040 fa272eeb79fd1936207808d4dc253330 404 PANTHER PTHR11373 5 314 4.2E-66 T 20-04-2016 APS56_RS08275 c369e267b0d80ec744ba14e138d2bf1a 209 Pfam PF02527 rRNA small subunit methyltransferase G 16 183 2.7E-37 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APS56_RS08275 c369e267b0d80ec744ba14e138d2bf1a 209 PANTHER PTHR31760 3 179 9.2E-48 T 20-04-2016 APS56_RS08275 c369e267b0d80ec744ba14e138d2bf1a 209 SUPERFAMILY SSF53335 3 152 2.68E-34 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08275 c369e267b0d80ec744ba14e138d2bf1a 209 PIRSF PIRSF003078 2 207 1.2E-50 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APS56_RS08275 c369e267b0d80ec744ba14e138d2bf1a 209 Gene3D G3DSA:3.40.50.150 2 181 4.3E-52 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08275 c369e267b0d80ec744ba14e138d2bf1a 209 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 24 186 1.2E-35 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APS56_RS08275 c369e267b0d80ec744ba14e138d2bf1a 209 PANTHER PTHR31760:SF0 3 179 9.2E-48 T 20-04-2016 APS56_RS08275 c369e267b0d80ec744ba14e138d2bf1a 209 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 8 202 23.794 T 20-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 Gene3D G3DSA:3.30.1490.20 128 197 2.8E-22 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 SUPERFAMILY SSF52440 1 115 2.3E-29 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 PANTHER PTHR23132 1 324 2.6E-72 T 20-04-2016 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 322 3.4E-81 T 20-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 Pfam PF07478 D-ala D-ala ligase C-terminus 125 319 6.0E-51 T 20-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 Gene3D G3DSA:3.40.50.20 1 104 4.2E-24 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 SUPERFAMILY SSF56059 116 319 3.01E-48 T 20-04-2016 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 Gene3D G3DSA:3.30.470.20 198 325 3.9E-41 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 323 31.563 T 20-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 266 293 - T 20-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 PIRSF PIRSF039102 1 327 3.6E-90 T 20-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 20-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 PANTHER PTHR23132:SF0 1 324 2.6E-72 T 20-04-2016 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 Pfam PF01820 D-ala D-ala ligase N-terminus 4 106 5.0E-20 T 20-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS14840 ca372fb00617b97f00cf41edf715c813 327 SMART SM01209 115 290 0.0082 T 20-04-2016 APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 29 44 - T 20-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 PANTHER PTHR10108:SF24 14 236 3.1E-64 T 20-04-2016 APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 SUPERFAMILY SSF53335 3 231 1.84E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 Gene3D G3DSA:3.40.50.150 16 236 3.8E-47 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 18 241 8.8E-79 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 9 241 34.131 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 Pfam PF01209 ubiE/COQ5 methyltransferase family 14 241 6.0E-70 T 20-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 149 163 - T 20-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APS56_RS14340 84e861933e820fe2ce53da082d319ed0 241 PANTHER PTHR10108 14 236 3.1E-64 T 20-04-2016 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 Gene3D G3DSA:3.40.50.1820 425 664 1.5E-34 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 SUPERFAMILY SSF50993 6 416 2.62E-82 T 20-04-2016 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 10 410 4.2E-99 T 20-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 615 637 6.5E-49 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 528 6.5E-49 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 481 505 6.5E-49 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 539 559 6.5E-49 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 597 612 6.5E-49 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 455 473 6.5E-49 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 PANTHER PTHR11757:SF3 1 689 0.0 T 20-04-2016 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 Gene3D G3DSA:2.130.10.120 78 414 4.9E-97 T 20-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 PANTHER PTHR11757 1 689 0.0 T 20-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 Pfam PF00326 Prolyl oligopeptidase family 470 683 1.0E-69 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APS56_RS16180 9e030820024d5c4668b39059bfcfbb28 689 SUPERFAMILY SSF53474 423 666 8.33E-45 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS10490 c5193648d819d4f748f6d1196434de7e 875 SUPERFAMILY SSF52540 462 538 1.09E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10490 c5193648d819d4f748f6d1196434de7e 875 SUPERFAMILY SSF52540 365 420 1.09E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10490 c5193648d819d4f748f6d1196434de7e 875 SUPERFAMILY SSF52540 28 167 1.09E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10490 c5193648d819d4f748f6d1196434de7e 875 PANTHER PTHR11274 5 202 1.5E-19 T 20-04-2016 APS56_RS10490 c5193648d819d4f748f6d1196434de7e 875 Pfam PF04851 Type III restriction enzyme, res subunit 10 165 1.2E-21 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APS56_RS10490 c5193648d819d4f748f6d1196434de7e 875 Gene3D G3DSA:3.40.50.300 7 169 5.5E-23 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10490 c5193648d819d4f748f6d1196434de7e 875 Gene3D G3DSA:3.40.50.300 484 538 2.2E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10490 c5193648d819d4f748f6d1196434de7e 875 SMART SM00487 8 196 1.2E-22 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS14740 667004b6e99464de19b281424e10f1d9 370 Pfam PF00535 Glycosyl transferase family 2 45 184 2.3E-24 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS14740 667004b6e99464de19b281424e10f1d9 370 SUPERFAMILY SSF53448 41 322 1.02E-42 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS14740 667004b6e99464de19b281424e10f1d9 370 PANTHER PTHR22916 28 248 3.2E-24 T 20-04-2016 APS56_RS14740 667004b6e99464de19b281424e10f1d9 370 Gene3D G3DSA:3.90.550.10 44 290 1.1E-33 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS14740 667004b6e99464de19b281424e10f1d9 370 PANTHER PTHR22916:SF23 28 248 3.2E-24 T 20-04-2016 APS56_RS11155 4f61c5a1b50a14f71a3b6557fc06ea40 290 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 8 246 2.8E-12 T 20-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APS56_RS11155 4f61c5a1b50a14f71a3b6557fc06ea40 290 PANTHER PTHR34990 1 281 6.4E-72 T 20-04-2016 APS56_RS11155 4f61c5a1b50a14f71a3b6557fc06ea40 290 SUPERFAMILY SSF56300 181 247 1.24E-27 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS11155 4f61c5a1b50a14f71a3b6557fc06ea40 290 SUPERFAMILY SSF56300 7 122 1.24E-27 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS11155 4f61c5a1b50a14f71a3b6557fc06ea40 290 Gene3D G3DSA:3.60.21.10 8 151 1.0E-25 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS11155 4f61c5a1b50a14f71a3b6557fc06ea40 290 Gene3D G3DSA:3.60.21.10 188 240 1.0E-25 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS11155 4f61c5a1b50a14f71a3b6557fc06ea40 290 PANTHER PTHR34990:SF2 1 281 6.4E-72 T 20-04-2016 APS56_RS01760 7d2e616b1f05a1baf44f18c70caeba15 193 PIRSF PIRSF020736 2 193 3.4E-49 T 20-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 APS56_RS01760 7d2e616b1f05a1baf44f18c70caeba15 193 PANTHER PTHR42637:SF1 1 183 5.8E-27 T 20-04-2016 APS56_RS01760 7d2e616b1f05a1baf44f18c70caeba15 193 Gene3D G3DSA:1.20.1260.10 3 193 4.9E-65 T 20-04-2016 IPR012347 Ferritin-related APS56_RS01760 7d2e616b1f05a1baf44f18c70caeba15 193 PANTHER PTHR42637 1 183 5.8E-27 T 20-04-2016 APS56_RS01760 7d2e616b1f05a1baf44f18c70caeba15 193 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 45 192 3.7E-30 T 20-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 APS56_RS01760 7d2e616b1f05a1baf44f18c70caeba15 193 SUPERFAMILY SSF47240 2 193 1.3E-67 T 20-04-2016 IPR009078 Ferritin-like superfamily APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 PANTHER PTHR11669:SF0 8 361 3.8E-133 T 20-04-2016 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 PANTHER PTHR11669:SF0 388 537 3.8E-133 T 20-04-2016 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 Gene3D G3DSA:3.40.50.300 8 154 3.1E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 Gene3D G3DSA:1.10.8.60 155 229 9.1E-29 T 20-04-2016 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 SUPERFAMILY SSF52540 29 209 8.49E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 SUPERFAMILY SSF48019 233 347 7.74E-13 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 SMART SM00382 38 168 4.1E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 PANTHER PTHR11669 8 361 3.8E-133 T 20-04-2016 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 PANTHER PTHR11669 388 537 3.8E-133 T 20-04-2016 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 6 346 1.7E-114 T 20-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 Gene3D G3DSA:1.20.272.10 233 347 2.9E-6 T 20-04-2016 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 42 60 2.5E-6 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 113 131 2.5E-6 T 20-04-2016 IPR001270 ClpA/B family GO:0005524 APS56_RS01765 d7ceedac141742a3703f2ac73a98cae7 573 Pfam PF13177 DNA polymerase III, delta subunit 21 167 2.5E-33 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 Gene3D G3DSA:1.20.1640.10 301 514 9.8E-45 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PANTHER PTHR32063:SF16 894 1061 0.0 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PANTHER PTHR32063:SF16 7 877 0.0 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 SUPERFAMILY SSF82866 306 508 4.84E-38 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PANTHER PTHR32063 894 1061 0.0 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PANTHER PTHR32063 7 877 0.0 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 SUPERFAMILY SSF82714 740 824 3.01E-8 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 Gene3D G3DSA:3.30.70.1430 45 144 1.6E-23 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 Pfam PF00873 AcrB/AcrD/AcrF family 10 1058 1.8E-166 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PRINTS PR00702 Acriflavin resistance protein family signature 480 503 1.3E-29 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PRINTS PR00702 Acriflavin resistance protein family signature 401 425 1.3E-29 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PRINTS PR00702 Acriflavin resistance protein family signature 43 61 1.3E-29 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PRINTS PR00702 Acriflavin resistance protein family signature 347 370 1.3E-29 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 1.3E-29 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 PRINTS PR00702 Acriflavin resistance protein family signature 15 39 1.3E-29 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 SUPERFAMILY SSF82693 577 692 1.31E-14 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 SUPERFAMILY SSF82866 828 1062 6.41E-44 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 Gene3D G3DSA:1.10.3850.10 832 1061 2.6E-69 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 Gene3D G3DSA:3.30.2090.10 740 826 1.4E-10 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 Gene3D G3DSA:3.30.2090.10 186 268 4.1E-14 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 Gene3D G3DSA:3.30.70.1430 582 690 1.8E-13 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 SUPERFAMILY SSF82693 284 338 1.1E-7 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 SUPERFAMILY SSF82693 139 185 1.1E-7 T 20-04-2016 APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 SUPERFAMILY SSF82714 186 269 1.15E-13 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS04890 019de5a13edce51be695bd3432e85c39 1064 SUPERFAMILY SSF82693 45 139 3.84E-23 T 20-04-2016 APS56_RS04335 c99a57c56a358376baf39f0d59050dad 212 Pfam PF04264 YceI-like domain 46 209 8.4E-27 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS04335 c99a57c56a358376baf39f0d59050dad 212 SUPERFAMILY SSF101874 45 209 1.96E-32 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS04335 c99a57c56a358376baf39f0d59050dad 212 SMART SM00867 45 210 1.2E-22 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS04335 c99a57c56a358376baf39f0d59050dad 212 Gene3D G3DSA:2.40.128.110 45 211 4.5E-35 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS06105 2cd7a5a341d2782f62343e5660dd681b 669 SUPERFAMILY SSF51445 323 496 1.1E-15 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS06105 2cd7a5a341d2782f62343e5660dd681b 669 Pfam PF10566 Glycoside hydrolase 97 321 532 8.0E-47 T 20-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain APS56_RS06105 2cd7a5a341d2782f62343e5660dd681b 669 Gene3D G3DSA:3.20.20.70 325 446 1.6E-8 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS06105 2cd7a5a341d2782f62343e5660dd681b 669 PANTHER PTHR35803 10 668 1.0E-182 T 20-04-2016 APS56_RS06105 2cd7a5a341d2782f62343e5660dd681b 669 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 570 665 5.9E-29 T 20-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain APS56_RS06105 2cd7a5a341d2782f62343e5660dd681b 669 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 37 304 4.4E-50 T 20-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain APS56_RS06105 2cd7a5a341d2782f62343e5660dd681b 669 PANTHER PTHR35803:SF3 10 668 1.0E-182 T 20-04-2016 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 Pfam PF01546 Peptidase family M20/M25/M40 82 450 6.1E-31 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 Pfam PF07687 Peptidase dimerisation domain 199 357 2.4E-27 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 PANTHER PTHR11014 288 462 1.9E-186 T 20-04-2016 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 PANTHER PTHR11014 1 270 1.9E-186 T 20-04-2016 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 SUPERFAMILY SSF55031 304 366 3.66E-5 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 SUPERFAMILY SSF55031 201 247 3.66E-5 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 SUPERFAMILY SSF53187 1 201 1.09E-58 T 20-04-2016 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 SUPERFAMILY SSF53187 372 456 1.09E-58 T 20-04-2016 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 Gene3D G3DSA:3.40.630.10 371 456 7.9E-58 T 20-04-2016 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 Gene3D G3DSA:3.40.630.10 2 195 7.9E-58 T 20-04-2016 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 Gene3D G3DSA:3.30.70.360 201 368 8.6E-63 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 PANTHER PTHR11014:SF72 288 462 1.9E-186 T 20-04-2016 APS56_RS12835 d5c802d65b01d7eca113cd4067934e20 462 PANTHER PTHR11014:SF72 1 270 1.9E-186 T 20-04-2016 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 Pfam PF02602 Uroporphyrinogen-III synthase HemD 350 517 3.1E-26 T 20-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 Gene3D G3DSA:3.40.190.10 2 104 1.8E-37 T 20-04-2016 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 SUPERFAMILY SSF53850 3 211 4.99E-57 T 20-04-2016 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 Gene3D G3DSA:3.40.50.10090 350 454 1.5E-19 T 20-04-2016 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 SUPERFAMILY SSF54782 215 304 5.49E-22 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 PANTHER PTHR11557:SF0 1 315 6.1E-106 T 20-04-2016 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 226 242 - T 20-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 PANTHER PTHR11557 1 315 6.1E-106 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 Gene3D G3DSA:3.30.160.40 216 300 4.7E-20 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 221 286 2.7E-14 T 20-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 SUPERFAMILY SSF69618 350 519 2.22E-26 T 20-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 PRINTS PR00151 Porphobilinogen deaminase signature 225 242 4.1E-35 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 PRINTS PR00151 Porphobilinogen deaminase signature 42 62 4.1E-35 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 PRINTS PR00151 Porphobilinogen deaminase signature 120 137 4.1E-35 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 PRINTS PR00151 Porphobilinogen deaminase signature 139 156 4.1E-35 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 PRINTS PR00151 Porphobilinogen deaminase signature 73 92 4.1E-35 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 Gene3D G3DSA:3.40.190.10 105 194 9.3E-24 T 20-04-2016 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 5 286 7.5E-84 T 20-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10465 e075ba2315160e4681469880c21121f4 525 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 5 207 2.2E-63 T 20-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS00520 ac8aa3848ddcea2e7dc24107ec0245d8 470 SUPERFAMILY SSF51556 12 467 4.08E-160 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS00520 ac8aa3848ddcea2e7dc24107ec0245d8 470 PANTHER PTHR30068 8 470 3.0E-202 T 20-04-2016 APS56_RS00520 ac8aa3848ddcea2e7dc24107ec0245d8 470 Pfam PF02614 Glucuronate isomerase 11 467 1.1E-190 T 20-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APS56_RS00520 ac8aa3848ddcea2e7dc24107ec0245d8 470 PANTHER PTHR30068:SF4 8 470 3.0E-202 T 20-04-2016 APS56_RS00520 ac8aa3848ddcea2e7dc24107ec0245d8 470 Gene3D G3DSA:1.10.2020.10 53 140 8.3E-38 T 20-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APS56_RS00520 ac8aa3848ddcea2e7dc24107ec0245d8 470 Gene3D G3DSA:3.20.20.140 141 469 5.1E-133 T 20-04-2016 APS56_RS00520 ac8aa3848ddcea2e7dc24107ec0245d8 470 Gene3D G3DSA:3.20.20.140 14 49 5.1E-133 T 20-04-2016 APS56_RS00520 ac8aa3848ddcea2e7dc24107ec0245d8 470 Hamap MF_00675 Uronate isomerase [uxaC]. 7 469 43.73 T 20-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 PANTHER PTHR30173:SF23 2 171 3.2E-35 T 20-04-2016 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 PANTHER PTHR30173 2 171 3.2E-35 T 20-04-2016 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 152 3.5E-21 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 Pfam PF08281 Sigma-70, region 4 104 150 1.1E-13 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 SUPERFAMILY SSF88659 100 156 1.44E-12 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 SUPERFAMILY SSF88946 12 88 6.28E-15 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 Pfam PF04542 Sigma-70 region 2 14 74 1.9E-9 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 Gene3D G3DSA:1.10.1740.10 12 90 2.1E-16 T 20-04-2016 APS56_RS01830 702b0f81da7c966817a9206d1f68bac3 181 Gene3D G3DSA:1.10.10.10 94 155 8.2E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 Pfam PF13424 Tetratricopeptide repeat 117 185 1.0E-8 T 20-04-2016 APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 SUPERFAMILY SSF48452 69 286 9.49E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 Pfam PF13176 Tetratricopeptide repeat 82 115 4.7E-6 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 Gene3D G3DSA:1.25.40.10 38 127 5.0E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 SUPERFAMILY SSF55874 421 517 2.45E-9 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 Gene3D G3DSA:1.25.40.10 128 222 9.9E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 SMART SM00028 79 112 0.0026 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 SMART SM00028 156 188 170.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 SMART SM00028 35 68 200.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS15790 708dad13494da51eb60c143cc52496b3 518 SMART SM00028 116 149 130.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03855 9570700ae67115c976d624d966323b74 148 Gene3D G3DSA:3.40.5.10 1 49 2.8E-21 T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal APS56_RS03855 9570700ae67115c976d624d966323b74 148 SUPERFAMILY SSF55653 60 145 8.5E-21 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APS56_RS03855 9570700ae67115c976d624d966323b74 148 Gene3D G3DSA:3.10.430.100 63 146 7.2E-24 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APS56_RS03855 9570700ae67115c976d624d966323b74 148 PANTHER PTHR21368 1 148 4.2E-36 T 20-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03855 9570700ae67115c976d624d966323b74 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 144 3.5E-23 T 20-04-2016 IPR020069 Ribosomal protein L9, C-terminal APS56_RS03855 9570700ae67115c976d624d966323b74 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 144 2.5E-31 T 20-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03855 9570700ae67115c976d624d966323b74 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 8.3E-20 T 20-04-2016 IPR020070 Ribosomal protein L9, N-terminal APS56_RS03855 9570700ae67115c976d624d966323b74 148 SUPERFAMILY SSF55658 1 56 1.92E-16 T 20-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APS56_RS03855 9570700ae67115c976d624d966323b74 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 146 22.152 T 20-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 Pfam PF02566 OsmC-like protein 299 402 3.1E-13 T 20-04-2016 IPR003718 OsmC/Ohr family APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 Gene3D G3DSA:3.30.300.20 272 404 2.0E-38 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 PANTHER PTHR11614 1 272 2.1E-73 T 20-04-2016 APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 SUPERFAMILY SSF53474 183 253 1.5E-38 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 SUPERFAMILY SSF53474 4 139 1.5E-38 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 Gene3D G3DSA:3.40.50.1820 2 263 1.7E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 Pfam PF12146 Serine aminopeptidase, S33 42 138 3.1E-12 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 SUPERFAMILY SSF82784 229 404 1.19E-35 T 20-04-2016 IPR003718 OsmC/Ohr family APS56_RS09035 5bbfe5ef9e9e4f6ab701dbbd4a225f4b 406 PANTHER PTHR11614:SF108 1 272 2.1E-73 T 20-04-2016 APS56_RS09090 5a88935d8047e7638f37ef5fb6afdc4f 290 SUPERFAMILY SSF55174 55 124 1.16E-16 T 20-04-2016 APS56_RS09090 5a88935d8047e7638f37ef5fb6afdc4f 290 Gene3D G3DSA:3.10.290.10 57 121 1.2E-25 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS09090 5a88935d8047e7638f37ef5fb6afdc4f 290 SMART SM00363 59 121 4.2E-13 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS09090 5a88935d8047e7638f37ef5fb6afdc4f 290 Pfam PF01479 S4 domain 60 105 6.3E-11 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS09090 5a88935d8047e7638f37ef5fb6afdc4f 290 PANTHER PTHR21600:SF2 58 290 8.0E-66 T 20-04-2016 APS56_RS09090 5a88935d8047e7638f37ef5fb6afdc4f 290 PANTHER PTHR21600 58 290 8.0E-66 T 20-04-2016 APS56_RS09090 5a88935d8047e7638f37ef5fb6afdc4f 290 Pfam PF00849 RNA pseudouridylate synthase 119 194 2.9E-10 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS09090 5a88935d8047e7638f37ef5fb6afdc4f 290 SUPERFAMILY SSF55120 118 284 4.46E-24 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS06625 946ae85b33a588e47cf47416aad8bcbd 192 Gene3D G3DSA:3.30.420.10 30 184 7.2E-33 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS06625 946ae85b33a588e47cf47416aad8bcbd 192 Pfam PF00665 Integrase core domain 32 147 1.9E-26 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS06625 946ae85b33a588e47cf47416aad8bcbd 192 PANTHER PTHR32552 6 188 1.3E-51 T 20-04-2016 APS56_RS06625 946ae85b33a588e47cf47416aad8bcbd 192 PANTHER PTHR32552:SF23 6 188 1.3E-51 T 20-04-2016 APS56_RS06625 946ae85b33a588e47cf47416aad8bcbd 192 SUPERFAMILY SSF53098 29 188 1.82E-36 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS14795 946ae85b33a588e47cf47416aad8bcbd 192 Gene3D G3DSA:3.30.420.10 30 184 7.2E-33 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS14795 946ae85b33a588e47cf47416aad8bcbd 192 Pfam PF00665 Integrase core domain 32 147 1.9E-26 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS14795 946ae85b33a588e47cf47416aad8bcbd 192 PANTHER PTHR32552 6 188 1.3E-51 T 20-04-2016 APS56_RS14795 946ae85b33a588e47cf47416aad8bcbd 192 PANTHER PTHR32552:SF23 6 188 1.3E-51 T 20-04-2016 APS56_RS14795 946ae85b33a588e47cf47416aad8bcbd 192 SUPERFAMILY SSF53098 29 188 1.82E-36 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS15990 946ae85b33a588e47cf47416aad8bcbd 192 Gene3D G3DSA:3.30.420.10 30 184 7.2E-33 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS15990 946ae85b33a588e47cf47416aad8bcbd 192 Pfam PF00665 Integrase core domain 32 147 1.9E-26 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS15990 946ae85b33a588e47cf47416aad8bcbd 192 PANTHER PTHR32552 6 188 1.3E-51 T 20-04-2016 APS56_RS15990 946ae85b33a588e47cf47416aad8bcbd 192 PANTHER PTHR32552:SF23 6 188 1.3E-51 T 20-04-2016 APS56_RS15990 946ae85b33a588e47cf47416aad8bcbd 192 SUPERFAMILY SSF53098 29 188 1.82E-36 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS01245 946ae85b33a588e47cf47416aad8bcbd 192 Gene3D G3DSA:3.30.420.10 30 184 7.2E-33 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS01245 946ae85b33a588e47cf47416aad8bcbd 192 Pfam PF00665 Integrase core domain 32 147 1.9E-26 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS01245 946ae85b33a588e47cf47416aad8bcbd 192 PANTHER PTHR32552 6 188 1.3E-51 T 20-04-2016 APS56_RS01245 946ae85b33a588e47cf47416aad8bcbd 192 PANTHER PTHR32552:SF23 6 188 1.3E-51 T 20-04-2016 APS56_RS01245 946ae85b33a588e47cf47416aad8bcbd 192 SUPERFAMILY SSF53098 29 188 1.82E-36 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS15065 f08b7bc1af81f8eff55a55fd4b83c219 436 Gene3D G3DSA:3.30.420.40 1 198 1.3E-22 T 20-04-2016 APS56_RS15065 f08b7bc1af81f8eff55a55fd4b83c219 436 SUPERFAMILY SSF53067 5 233 7.56E-25 T 20-04-2016 APS56_RS15065 f08b7bc1af81f8eff55a55fd4b83c219 436 PANTHER PTHR10196 1 195 8.6E-15 T 20-04-2016 APS56_RS15065 f08b7bc1af81f8eff55a55fd4b83c219 436 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 193 1.2E-20 T 20-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 SUPERFAMILY SSF51445 32 413 9.37E-100 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PRINTS PR00133 Glycosyl hydrolase family 3 signature 225 241 2.2E-23 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PRINTS PR00133 Glycosyl hydrolase family 3 signature 194 210 2.2E-23 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PRINTS PR00133 Glycosyl hydrolase family 3 signature 148 167 2.2E-23 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PRINTS PR00133 Glycosyl hydrolase family 3 signature 125 141 2.2E-23 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PRINTS PR00133 Glycosyl hydrolase family 3 signature 295 313 2.2E-23 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 Gene3D G3DSA:3.40.50.1700 400 481 1.1E-67 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 Gene3D G3DSA:3.40.50.1700 638 781 1.1E-67 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 414 778 8.9E-60 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 54 375 1.5E-56 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 SUPERFAMILY SSF52279 638 781 3.66E-51 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 SUPERFAMILY SSF52279 414 480 3.66E-51 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 Gene3D G3DSA:3.20.20.300 32 395 1.1E-107 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 SMART SM01217 815 884 5.6E-33 T 20-04-2016 IPR026891 Fibronectin type III-like domain APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PANTHER PTHR30620:SF37 623 896 1.0E-277 T 20-04-2016 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PANTHER PTHR30620:SF37 3 68 1.0E-277 T 20-04-2016 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PANTHER PTHR30620:SF37 95 474 1.0E-277 T 20-04-2016 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 SMART SM00758 500 640 7.7E-21 T 20-04-2016 IPR011658 PA14 domain APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 Pfam PF14310 Fibronectin type III-like domain 815 884 1.5E-23 T 20-04-2016 IPR026891 Fibronectin type III-like domain APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 SUPERFAMILY SSF56988 501 680 1.44E-34 T 20-04-2016 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 Pfam PF07691 PA14 domain 502 623 2.2E-28 T 20-04-2016 IPR011658 PA14 domain APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PANTHER PTHR30620 623 896 1.0E-277 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PANTHER PTHR30620 3 68 1.0E-277 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS02980 3caa8c08c404ec42bb4cb7554f34c58e 896 PANTHER PTHR30620 95 474 1.0E-277 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS08090 9f0cc216e4f24ffb7260458337bc4a19 312 PANTHER PTHR11358 17 295 2.0E-82 T 20-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APS56_RS08090 9f0cc216e4f24ffb7260458337bc4a19 312 PIRSF PIRSF036979 3 282 1.0E-56 T 20-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APS56_RS08090 9f0cc216e4f24ffb7260458337bc4a19 312 SUPERFAMILY SSF52768 12 280 5.4E-72 T 20-04-2016 APS56_RS08090 9f0cc216e4f24ffb7260458337bc4a19 312 Pfam PF00491 Arginase family 20 277 2.9E-64 T 20-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APS56_RS08090 9f0cc216e4f24ffb7260458337bc4a19 312 Gene3D G3DSA:3.40.800.10 14 279 5.5E-66 T 20-04-2016 IPR023696 Ureohydrolase domain APS56_RS08090 9f0cc216e4f24ffb7260458337bc4a19 312 PANTHER PTHR11358:SF34 17 295 2.0E-82 T 20-04-2016 APS56_RS08090 9f0cc216e4f24ffb7260458337bc4a19 312 TIGRFAM TIGR01230 agmatinase: agmatinase 16 278 2.9E-67 T 20-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 APS56_RS08090 9f0cc216e4f24ffb7260458337bc4a19 312 ProSitePatterns PS01053 Arginase family signature. 208 229 - T 20-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 APS56_RS03840 c6020660d93bf9cef6b73e68d75d9ae7 399 PANTHER PTHR11662 26 385 3.3E-13 T 20-04-2016 APS56_RS03840 c6020660d93bf9cef6b73e68d75d9ae7 399 Gene3D G3DSA:1.20.1250.20 199 384 6.2E-13 T 20-04-2016 APS56_RS03840 c6020660d93bf9cef6b73e68d75d9ae7 399 SUPERFAMILY SSF103473 4 385 1.96E-43 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS03840 c6020660d93bf9cef6b73e68d75d9ae7 399 Gene3D G3DSA:1.20.1250.20 6 186 1.7E-16 T 20-04-2016 APS56_RS03840 c6020660d93bf9cef6b73e68d75d9ae7 399 Pfam PF07690 Major Facilitator Superfamily 12 352 1.3E-27 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SUPERFAMILY SSF49299 140 228 2.22E-13 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Pfam PF13573 SprB repeat 1468 1507 9.3E-5 T 20-04-2016 IPR025667 SprB repeat APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Pfam PF13573 SprB repeat 1632 1665 3.7E-6 T 20-04-2016 IPR025667 SprB repeat APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Pfam PF13573 SprB repeat 1708 1742 2.0E-7 T 20-04-2016 IPR025667 SprB repeat APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Pfam PF13573 SprB repeat 1553 1589 1.7E-9 T 20-04-2016 IPR025667 SprB repeat APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Pfam PF13573 SprB repeat 1391 1419 9.7E-10 T 20-04-2016 IPR025667 SprB repeat APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1950 2025 1.9E-10 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SUPERFAMILY SSF49299 1875 1941 3.92E-15 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Pfam PF00801 PKD domain 1877 1922 1.6E-7 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Pfam PF00801 PKD domain 447 509 1.1E-8 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Pfam PF13585 C-terminal domain of CHU protein family 1949 2020 7.0E-15 T 20-04-2016 APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Gene3D G3DSA:2.60.40.670 139 228 2.2E-15 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Gene3D G3DSA:2.60.40.670 341 436 8.1E-4 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Gene3D G3DSA:2.60.40.670 528 628 1.1E-14 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Gene3D G3DSA:2.60.40.670 650 712 6.8E-10 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Gene3D G3DSA:2.60.40.670 1874 1943 2.9E-14 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 Gene3D G3DSA:2.60.40.670 442 524 2.7E-17 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SUPERFAMILY SSF49299 647 711 9.55E-10 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SMART SM00089 528 626 0.12 T 20-04-2016 IPR022409 PKD/Chitinase domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SMART SM00089 441 526 2.0E-9 T 20-04-2016 IPR022409 PKD/Chitinase domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SMART SM00089 1870 1945 1.6E-5 T 20-04-2016 IPR022409 PKD/Chitinase domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SMART SM00089 141 228 5.9E-9 T 20-04-2016 IPR022409 PKD/Chitinase domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SMART SM00089 634 713 0.49 T 20-04-2016 IPR022409 PKD/Chitinase domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SUPERFAMILY SSF49299 409 526 1.31E-17 T 20-04-2016 IPR000601 PKD domain APS56_RS00085 025f22effc4af5ad4fa23f175e7c6b9f 2036 SUPERFAMILY SSF49299 527 627 1.7E-9 T 20-04-2016 IPR000601 PKD domain APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 SUPERFAMILY SSF118215 6 117 4.45E-109 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 SUPERFAMILY SSF118215 171 461 4.45E-109 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 356 379 - T 20-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 Gene3D G3DSA:1.10.3860.10 1 117 6.7E-134 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 Gene3D G3DSA:1.10.3860.10 171 463 6.7E-134 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 PRINTS PR00173 Glutamate-aspartate symporter signature 388 407 1.3E-48 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 PRINTS PR00173 Glutamate-aspartate symporter signature 195 217 1.3E-48 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 PRINTS PR00173 Glutamate-aspartate symporter signature 415 435 1.3E-48 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 1.3E-48 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 PRINTS PR00173 Glutamate-aspartate symporter signature 353 379 1.3E-48 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 1.3E-48 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 PRINTS PR00173 Glutamate-aspartate symporter signature 243 262 1.3E-48 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 Pfam PF00375 Sodium:dicarboxylate symporter family 6 460 3.4E-123 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS02340 8e14ce75242f05108a945c4ffc611dc8 480 PANTHER PTHR11958 1 463 1.9E-149 T 20-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS03785 40d8f7503bbd8d3e8af40cf6756e1fe3 147 PANTHER PTHR23404 34 146 2.1E-26 T 20-04-2016 APS56_RS03785 40d8f7503bbd8d3e8af40cf6756e1fe3 147 SUPERFAMILY SSF54690 25 146 3.92E-31 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03785 40d8f7503bbd8d3e8af40cf6756e1fe3 147 PANTHER PTHR23404:SF2 34 146 2.1E-26 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03785 40d8f7503bbd8d3e8af40cf6756e1fe3 147 Gene3D G3DSA:3.90.1170.40 22 146 3.5E-36 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03785 40d8f7503bbd8d3e8af40cf6756e1fe3 147 Pfam PF02391 MoaE protein 23 126 1.8E-25 T 20-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03775 9f070e97384861a92237ba6cdcf8f306 77 PANTHER PTHR33359 1 77 2.2E-14 T 20-04-2016 APS56_RS03775 9f070e97384861a92237ba6cdcf8f306 77 Gene3D G3DSA:3.10.20.30 1 77 5.8E-14 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS03775 9f070e97384861a92237ba6cdcf8f306 77 Pfam PF02597 ThiS family 5 77 1.7E-9 T 20-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APS56_RS03775 9f070e97384861a92237ba6cdcf8f306 77 SUPERFAMILY SSF54285 3 77 3.74E-12 T 20-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APS56_RS03815 29eb9be5ab93f3171f6f3ddd2a9a6db9 204 Gene3D G3DSA:3.40.50.270 43 198 4.8E-26 T 20-04-2016 APS56_RS03815 29eb9be5ab93f3171f6f3ddd2a9a6db9 204 PANTHER PTHR11717:SF18 16 108 1.1E-23 T 20-04-2016 APS56_RS03815 29eb9be5ab93f3171f6f3ddd2a9a6db9 204 PANTHER PTHR11717:SF18 126 202 1.1E-23 T 20-04-2016 APS56_RS03815 29eb9be5ab93f3171f6f3ddd2a9a6db9 204 SUPERFAMILY SSF52788 43 201 3.53E-25 T 20-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APS56_RS03815 29eb9be5ab93f3171f6f3ddd2a9a6db9 204 PANTHER PTHR11717 16 108 1.1E-23 T 20-04-2016 APS56_RS03815 29eb9be5ab93f3171f6f3ddd2a9a6db9 204 PANTHER PTHR11717 126 202 1.1E-23 T 20-04-2016 APS56_RS13025 8ee5c4042985fc1b118797305e6c967d 327 Gene3D G3DSA:1.20.120.80 258 327 3.0E-57 T 20-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 APS56_RS13025 8ee5c4042985fc1b118797305e6c967d 327 Gene3D G3DSA:1.20.120.80 23 145 3.0E-57 T 20-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 APS56_RS13025 8ee5c4042985fc1b118797305e6c967d 327 SUPERFAMILY SSF81452 19 136 1.11E-19 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APS56_RS13025 8ee5c4042985fc1b118797305e6c967d 327 SUPERFAMILY SSF81452 255 326 6.8E-20 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APS56_RS13025 8ee5c4042985fc1b118797305e6c967d 327 PANTHER PTHR11403 11 146 4.0E-31 T 20-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 APS56_RS13025 8ee5c4042985fc1b118797305e6c967d 327 PANTHER PTHR11403 257 327 4.0E-31 T 20-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 APS56_RS13025 8ee5c4042985fc1b118797305e6c967d 327 Pfam PF00510 Cytochrome c oxidase subunit III 259 326 3.2E-8 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APS56_RS01490 b3596656fb5f35fcc7ccffb449eb896c 163 Pfam PF03713 Domain of unknown function (DUF305) 102 155 4.3E-11 T 20-04-2016 IPR005183 Domain of unknown function DUF305 APS56_RS01490 b3596656fb5f35fcc7ccffb449eb896c 163 Gene3D G3DSA:1.20.1260.10 60 158 3.7E-20 T 20-04-2016 IPR012347 Ferritin-related APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 Gene3D G3DSA:1.10.150.240 19 97 9.6E-10 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 PANTHER PTHR12725 9 229 4.8E-30 T 20-04-2016 APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 8 224 1.8E-52 T 20-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 SUPERFAMILY SSF56784 7 229 5.47E-41 T 20-04-2016 IPR023214 HAD-like domain APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 199 4.9E-12 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 Gene3D G3DSA:3.40.50.1000 98 228 9.5E-32 T 20-04-2016 IPR023214 HAD-like domain APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 204 1.5E-27 T 20-04-2016 IPR023214 HAD-like domain APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 7.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 117 130 7.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 148 164 7.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS13870 8f967c32cfd000f61be190f66ab578a2 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 194 207 7.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS11455 ca948092d511184bf7a6a24e8bc151de 158 Pfam PF01928 CYTH domain 1 136 8.8E-15 T 20-04-2016 IPR023577 CYTH domain APS56_RS11455 ca948092d511184bf7a6a24e8bc151de 158 SUPERFAMILY SSF55154 1 149 6.54E-42 T 20-04-2016 IPR033469 CYTH-like domain APS56_RS11455 ca948092d511184bf7a6a24e8bc151de 158 SMART SM01118 1 148 1.5E-18 T 20-04-2016 IPR023577 CYTH domain APS56_RS11455 ca948092d511184bf7a6a24e8bc151de 158 PANTHER PTHR40114 1 158 1.6E-43 T 20-04-2016 APS56_RS11455 ca948092d511184bf7a6a24e8bc151de 158 PIRSF PIRSF016487 1 157 4.5E-57 T 20-04-2016 IPR012042 Inorganic triphosphatase NeuTTM/CthTTM-like APS56_RS11455 ca948092d511184bf7a6a24e8bc151de 158 Gene3D G3DSA:2.40.320.10 2 152 1.7E-53 T 20-04-2016 IPR023577 CYTH domain APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 Pfam PF09087 Cyclomaltodextrinase, N-terminal 21 107 2.9E-27 T 20-04-2016 IPR015171 Cyclomaltodextrinase, N-terminal UniPathway: UPA00153 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 PANTHER PTHR10357 156 502 5.3E-67 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 PANTHER PTHR10357 520 582 5.3E-67 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 PANTHER PTHR10357 122 138 5.3E-67 T 20-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 SMART SM00642 124 535 5.6E-59 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 SUPERFAMILY SSF51445 120 544 3.84E-90 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 Gene3D G3DSA:2.60.40.1180 545 622 1.3E-19 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 Pfam PF10438 Cyclo-malto-dextrinase C-terminal domain 547 620 2.3E-17 T 20-04-2016 IPR019492 Cyclo-malto-dextrinase, C-terminal UniPathway: UPA00153 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 PANTHER PTHR10357:SF11 156 502 5.3E-67 T 20-04-2016 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 PANTHER PTHR10357:SF11 520 582 5.3E-67 T 20-04-2016 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 PANTHER PTHR10357:SF11 122 138 5.3E-67 T 20-04-2016 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 Gene3D G3DSA:2.60.40.10 17 104 7.6E-26 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 SUPERFAMILY SSF51011 546 622 1.66E-8 T 20-04-2016 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 SUPERFAMILY SSF81296 18 108 1.25E-23 T 20-04-2016 IPR014756 Immunoglobulin E-set APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 Gene3D G3DSA:3.20.20.80 121 544 2.0E-88 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS05820 e2adda260837a71e6e638c84d820c7a3 625 Pfam PF00128 Alpha amylase, catalytic domain 159 488 1.5E-54 T 20-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 PIRSF PIRSF001549 1 456 2.2E-130 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 Pfam PF03129 Anticodon binding domain 384 456 3.5E-13 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 PANTHER PTHR11476:SF1 97 456 3.4E-177 T 20-04-2016 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 PANTHER PTHR11476:SF1 4 73 3.4E-177 T 20-04-2016 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 Gene3D G3DSA:3.30.930.10 266 361 3.0E-108 T 20-04-2016 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 Gene3D G3DSA:3.30.930.10 2 214 3.0E-108 T 20-04-2016 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 PANTHER PTHR11476 97 456 3.4E-177 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 PANTHER PTHR11476 4 73 3.4E-177 T 20-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 447 1.0E-119 T 20-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 454 26.661 T 20-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 Pfam PF13393 Histidyl-tRNA synthetase 87 349 8.9E-31 T 20-04-2016 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 Pfam PF13393 Histidyl-tRNA synthetase 10 69 4.0E-6 T 20-04-2016 APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 Gene3D G3DSA:3.40.50.800 365 456 2.5E-24 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 SUPERFAMILY SSF52954 366 455 1.07E-19 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS05025 a9e767e803836bf86131ad5b481a0912 456 SUPERFAMILY SSF55681 5 359 1.79E-76 T 20-04-2016 APS56_RS14695 451115317f37935e1edaaf7c55ed24b5 218 Gene3D G3DSA:3.30.1060.10 16 193 2.2E-65 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS14695 451115317f37935e1edaaf7c55ed24b5 218 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 192 1.0E-50 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS14695 451115317f37935e1edaaf7c55ed24b5 218 Pfam PF01625 Peptide methionine sulfoxide reductase 45 194 2.2E-55 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS14695 451115317f37935e1edaaf7c55ed24b5 218 SUPERFAMILY SSF55068 32 206 3.01E-66 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS14695 451115317f37935e1edaaf7c55ed24b5 218 PANTHER PTHR10173 26 194 7.0E-56 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APS56_RS14695 451115317f37935e1edaaf7c55ed24b5 218 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 200 33.293 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS14695 451115317f37935e1edaaf7c55ed24b5 218 PANTHER PTHR10173:SF6 26 194 7.0E-56 T 20-04-2016 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 PANTHER PTHR11609 4 160 6.7E-78 T 20-04-2016 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 Pfam PF00731 AIR carboxylase 3 149 9.5E-63 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 SMART SM01001 2 152 2.5E-90 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 PIRSF PIRSF001338 1 160 3.9E-67 T 20-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 PANTHER PTHR11609:SF5 4 160 6.7E-78 T 20-04-2016 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 Gene3D G3DSA:3.40.50.7700 3 157 6.1E-68 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 SUPERFAMILY SSF52255 3 156 6.54E-62 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 4 156 32.018 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APS56_RS06565 28a101519c7223adedf86cb310e9f0c1 160 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 4 157 1.1E-61 T 20-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APS56_RS04320 432ae8f602f9c4b4e90b0b8054accb0d 308 Pfam PF00005 ABC transporter 20 160 1.9E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS04320 432ae8f602f9c4b4e90b0b8054accb0d 308 PANTHER PTHR24220 6 243 9.6E-92 T 20-04-2016 APS56_RS04320 432ae8f602f9c4b4e90b0b8054accb0d 308 Gene3D G3DSA:3.40.50.300 4 225 8.3E-59 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04320 432ae8f602f9c4b4e90b0b8054accb0d 308 PANTHER PTHR24220:SF450 6 243 9.6E-92 T 20-04-2016 APS56_RS04320 432ae8f602f9c4b4e90b0b8054accb0d 308 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS04320 432ae8f602f9c4b4e90b0b8054accb0d 308 SUPERFAMILY SSF52540 4 224 1.04E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04320 432ae8f602f9c4b4e90b0b8054accb0d 308 Pfam PF13732 Domain of unknown function (DUF4162) 214 305 4.3E-18 T 20-04-2016 IPR025302 Domain of unknown function DUF4162 APS56_RS04320 432ae8f602f9c4b4e90b0b8054accb0d 308 SMART SM00382 29 218 5.1E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS11505 301b87672e0a6e07c7320274e14f3d25 333 PANTHER PTHR11603:SF148 1 333 1.6E-139 T 20-04-2016 APS56_RS11505 301b87672e0a6e07c7320274e14f3d25 333 PANTHER PTHR11603 1 333 1.6E-139 T 20-04-2016 APS56_RS11505 301b87672e0a6e07c7320274e14f3d25 333 PIRSF PIRSF002849 2 333 2.8E-129 T 20-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted APS56_RS11505 301b87672e0a6e07c7320274e14f3d25 333 SUPERFAMILY SSF52540 31 309 4.69E-38 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11505 301b87672e0a6e07c7320274e14f3d25 333 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 53 183 2.9E-65 T 20-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 APS56_RS11505 301b87672e0a6e07c7320274e14f3d25 333 Gene3D G3DSA:1.10.8.300 213 329 1.1E-39 T 20-04-2016 APS56_RS11505 301b87672e0a6e07c7320274e14f3d25 333 Gene3D G3DSA:3.40.50.300 35 199 5.6E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 246 6.7E-66 T 20-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 Hamap MF_00258 Glutamate racemase [murI]. 4 255 33.758 T 20-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 PANTHER PTHR21198:SF2 1 259 7.9E-85 T 20-04-2016 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 Gene3D G3DSA:3.40.50.1860 2 172 9.4E-52 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 SUPERFAMILY SSF53681 5 106 3.04E-35 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 214 8.2E-33 T 20-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 SUPERFAMILY SSF53681 108 248 1.05E-30 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 PANTHER PTHR21198 1 259 7.9E-85 T 20-04-2016 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 70 78 - T 20-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS13110 897b30677b5d46c15bb6a0c33041748f 259 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 20-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 SUPERFAMILY SSF51905 87 271 4.75E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 SUPERFAMILY SSF51905 466 516 4.75E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 243 252 5.1E-5 T 20-04-2016 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 84 106 5.1E-5 T 20-04-2016 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 PIRSF PIRSF038984 1 518 1.3E-192 T 20-04-2016 IPR028348 FAD dependent protein APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 PANTHER PTHR10617 60 373 3.4E-143 T 20-04-2016 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 PANTHER PTHR10617 457 518 3.4E-143 T 20-04-2016 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 Gene3D G3DSA:3.50.50.60 458 517 2.4E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 Gene3D G3DSA:3.50.50.60 87 273 2.4E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 PANTHER PTHR10617:SF52 60 373 3.4E-143 T 20-04-2016 APS56_RS08865 f61606ffb17bdcc21424e9fa73bdc0a6 518 PANTHER PTHR10617:SF52 457 518 3.4E-143 T 20-04-2016 APS56_RS15430 3b2c678f10958e9fabead726f728464e 410 PANTHER PTHR10120 4 410 3.8E-129 T 20-04-2016 APS56_RS15430 3b2c678f10958e9fabead726f728464e 410 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 34 203 9.4E-57 T 20-04-2016 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 APS56_RS15430 3b2c678f10958e9fabead726f728464e 410 Gene3D G3DSA:3.30.2010.10 201 292 1.2E-17 T 20-04-2016 APS56_RS15430 3b2c678f10958e9fabead726f728464e 410 Pfam PF01435 Peptidase family M48 206 409 1.6E-40 T 20-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APS56_RS15430 3b2c678f10958e9fabead726f728464e 410 PANTHER PTHR10120:SF24 4 410 3.8E-129 T 20-04-2016 IPR027057 CAAX prenyl protease 1 GO:0008233|GO:0071586 KEGG: 00900+3.4.24.84 APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 PANTHER PTHR10342:SF199 359 440 1.9E-97 T 20-04-2016 APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 PANTHER PTHR10342:SF199 3 329 1.9E-97 T 20-04-2016 APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 PANTHER PTHR10342 359 440 1.9E-97 T 20-04-2016 APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 PANTHER PTHR10342 3 329 1.9E-97 T 20-04-2016 APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 ProSitePatterns PS00523 Sulfatases signature 1. 40 52 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 Gene3D G3DSA:3.40.720.10 1 330 6.9E-83 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 Gene3D G3DSA:3.30.1120.10 365 416 3.2E-7 T 20-04-2016 APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 Pfam PF00884 Sulfatase 3 298 3.7E-55 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS05960 22fdd66b4b0f06e34d5b084084fdbe7f 582 SUPERFAMILY SSF53649 1 415 1.74E-95 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS10150 9bcd87709dad16f1d8af3c761d610545 154 Gene3D G3DSA:1.20.120.450 6 153 1.2E-4 T 20-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase APS56_RS10150 9bcd87709dad16f1d8af3c761d610545 154 Pfam PF12867 DinB superfamily 8 145 5.3E-15 T 20-04-2016 IPR024775 DinB-like domain APS56_RS10150 9bcd87709dad16f1d8af3c761d610545 154 SUPERFAMILY SSF109854 5 152 4.21E-15 T 20-04-2016 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 111 1.1E-42 T 20-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 SUPERFAMILY SSF51246 339 457 2.46E-36 T 20-04-2016 IPR011054 Rudiment single hybrid motif APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 SUPERFAMILY SSF89000 834 1015 1.57E-51 T 20-04-2016 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 PIRSF PIRSF001594 1 1150 0.0 T 20-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Gene3D G3DSA:3.40.50.20 3 131 4.6E-47 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 SUPERFAMILY SSF51230 1073 1149 4.58E-17 T 20-04-2016 IPR011053 Single hybrid motif APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 1106 1123 - T 20-04-2016 IPR001882 Biotin-binding site APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 155 169 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Gene3D G3DSA:3.10.600.10 993 1069 2.3E-29 T 20-04-2016 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Pfam PF02436 Conserved carboxylase domain 829 1032 4.5E-69 T 20-04-2016 IPR003379 Carboxylase, conserved domain APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 SUPERFAMILY SSF51569 525 836 7.47E-81 T 20-04-2016 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Pfam PF02785 Biotin carboxylase C-terminal domain 344 451 8.1E-33 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 117 324 5.4E-73 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Gene3D G3DSA:1.10.10.60 952 992 1.3E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Gene3D G3DSA:2.40.50.100 1075 1149 9.0E-19 T 20-04-2016 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 SMART SM00878 344 451 7.7E-46 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 5 1149 0.0 T 20-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 SUPERFAMILY SSF56059 85 349 5.13E-67 T 20-04-2016 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Pfam PF00682 HMGL-like 532 806 1.2E-28 T 20-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 SUPERFAMILY SSF52440 3 114 2.59E-43 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Gene3D G3DSA:3.30.1490.20 132 204 3.6E-27 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 PANTHER PTHR18866 2 1149 0.0 T 20-04-2016 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Gene3D G3DSA:3.30.470.20 205 457 2.1E-93 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 PANTHER PTHR18866:SF103 2 1149 0.0 T 20-04-2016 APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Pfam PF00364 Biotin-requiring enzyme 1083 1149 5.8E-13 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APS56_RS07990 2315879b72f41ef6f24b68b3250fcf22 1150 Gene3D G3DSA:3.20.20.70 511 820 5.5E-127 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 Gene3D G3DSA:2.60.40.1180 415 466 4.7E-5 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 PANTHER PTHR11069:SF12 205 482 1.7E-86 T 20-04-2016 APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 PANTHER PTHR11069:SF12 29 183 1.7E-86 T 20-04-2016 APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 Gene3D G3DSA:3.20.20.80 49 414 2.8E-109 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 SUPERFAMILY SSF51445 70 421 1.43E-61 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 70 418 1.3E-38 T 20-04-2016 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 PANTHER PTHR11069 205 482 1.7E-86 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 PANTHER PTHR11069 29 183 1.7E-86 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 PRINTS PR00843 Glycosyl hydrolase family 30 signature 60 80 3.3E-9 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 PRINTS PR00843 Glycosyl hydrolase family 30 signature 123 151 3.3E-9 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS05930 fe28a985c504397965e05d1161f3a592 482 PRINTS PR00843 Glycosyl hydrolase family 30 signature 95 121 3.3E-9 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS02245 40526f0241c6de8607d9e5ed93d23cf2 317 Gene3D G3DSA:3.40.50.1110 85 163 1.0E-9 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS02245 40526f0241c6de8607d9e5ed93d23cf2 317 Gene3D G3DSA:3.40.50.1110 227 315 1.0E-9 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS02245 40526f0241c6de8607d9e5ed93d23cf2 317 SUPERFAMILY SSF52266 230 315 1.32E-7 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS02245 40526f0241c6de8607d9e5ed93d23cf2 317 SUPERFAMILY SSF52266 85 164 1.32E-7 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS14390 9b29ff7e1529d7c1e9ae454d84313af8 182 Gene3D G3DSA:3.10.50.40 41 178 2.7E-20 T 20-04-2016 APS56_RS14390 9b29ff7e1529d7c1e9ae454d84313af8 182 SUPERFAMILY SSF54534 23 177 2.95E-19 T 20-04-2016 APS56_RS14390 9b29ff7e1529d7c1e9ae454d84313af8 182 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 87 173 2.9E-11 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APS56_RS14390 9b29ff7e1529d7c1e9ae454d84313af8 182 TIGRFAM TIGR03516 ppisom_GldI: peptidyl-prolyl isomerase, gliding motility-associated 1 177 7.4E-77 T 20-04-2016 IPR019869 Gliding motility-associated, peptidyl-prolyl isomerase, GldI APS56_RS14015 5b1b12133f019a50e11e0bab2ad2a714 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APS56_RS14015 5b1b12133f019a50e11e0bab2ad2a714 132 PANTHER PTHR11758 1 132 5.5E-51 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APS56_RS14015 5b1b12133f019a50e11e0bab2ad2a714 132 Gene3D G3DSA:3.30.1490.10 76 132 1.1E-27 T 20-04-2016 APS56_RS14015 5b1b12133f019a50e11e0bab2ad2a714 132 Gene3D G3DSA:3.30.1370.30 1 70 4.4E-26 T 20-04-2016 APS56_RS14015 5b1b12133f019a50e11e0bab2ad2a714 132 Pfam PF00410 Ribosomal protein S8 4 132 5.0E-50 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APS56_RS14015 5b1b12133f019a50e11e0bab2ad2a714 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 132 30.861 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APS56_RS14015 5b1b12133f019a50e11e0bab2ad2a714 132 SUPERFAMILY SSF56047 1 132 6.93E-45 T 20-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 TIGRFAM TIGR00016 ackA: acetate kinase 1 393 3.8E-148 T 20-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 SUPERFAMILY SSF53067 1 195 1.04E-62 T 20-04-2016 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PIRSF PIRSF000722 1 395 1.5E-150 T 20-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 Gene3D G3DSA:3.30.420.40 203 392 2.6E-80 T 20-04-2016 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PANTHER PTHR21060:SF11 1 395 4.8E-195 T 20-04-2016 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 Pfam PF00871 Acetokinase family 3 386 5.0E-144 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PANTHER PTHR21060 1 395 4.8E-195 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 170.245 T 20-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PRINTS PR00471 Acetate kinase family signature 173 186 3.2E-45 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PRINTS PR00471 Acetate kinase family signature 297 310 3.2E-45 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PRINTS PR00471 Acetate kinase family signature 319 335 3.2E-45 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PRINTS PR00471 Acetate kinase family signature 201 222 3.2E-45 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PRINTS PR00471 Acetate kinase family signature 374 386 3.2E-45 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 PRINTS PR00471 Acetate kinase family signature 3 14 3.2E-45 T 20-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 Gene3D G3DSA:3.30.420.40 1 202 1.4E-7 T 20-04-2016 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 SUPERFAMILY SSF53067 156 394 6.88E-85 T 20-04-2016 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 201 218 - T 20-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS07340 dea68efa75477dfea0e9e9adf06eef39 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 20-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APS56_RS08065 8eab7ef485b27676b5d66b815145ce75 134 Gene3D G3DSA:3.10.180.10 1 131 4.8E-41 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS08065 8eab7ef485b27676b5d66b815145ce75 134 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 5 131 3.9E-44 T 20-04-2016 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384 APS56_RS08065 8eab7ef485b27676b5d66b815145ce75 134 PANTHER PTHR21366 1 131 2.3E-33 T 20-04-2016 APS56_RS08065 8eab7ef485b27676b5d66b815145ce75 134 SUPERFAMILY SSF54593 1 133 5.5E-34 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS08065 8eab7ef485b27676b5d66b815145ce75 134 PANTHER PTHR21366:SF0 1 131 2.3E-33 T 20-04-2016 APS56_RS08065 8eab7ef485b27676b5d66b815145ce75 134 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 115 1.0E-20 T 20-04-2016 APS56_RS14075 52459346be414b788de565ef630f80ef 163 SUPERFAMILY SSF64263 1 119 1.29E-46 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14075 52459346be414b788de565ef630f80ef 163 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14075 52459346be414b788de565ef630f80ef 163 PANTHER PTHR14413:SF5 1 119 2.5E-56 T 20-04-2016 APS56_RS14075 52459346be414b788de565ef630f80ef 163 Pfam PF01196 Ribosomal protein L17 20 116 4.3E-33 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14075 52459346be414b788de565ef630f80ef 163 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 3.2E-42 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14075 52459346be414b788de565ef630f80ef 163 Gene3D G3DSA:3.90.1030.10 1 117 7.8E-47 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14075 52459346be414b788de565ef630f80ef 163 PANTHER PTHR14413 1 119 2.5E-56 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14075 52459346be414b788de565ef630f80ef 163 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.873 T 20-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS05090 235ea56548e7ffad85e5532b69ccb0f8 119 PANTHER PTHR34134:SF1 1 119 4.0E-35 T 20-04-2016 APS56_RS05090 235ea56548e7ffad85e5532b69ccb0f8 119 SUPERFAMILY SSF46785 1 117 2.95E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05090 235ea56548e7ffad85e5532b69ccb0f8 119 Gene3D G3DSA:1.10.10.10 1 77 1.6E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05090 235ea56548e7ffad85e5532b69ccb0f8 119 PIRSF PIRSF019455 1 119 4.3E-26 T 20-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APS56_RS05090 235ea56548e7ffad85e5532b69ccb0f8 119 Pfam PF03965 Penicillinase repressor 4 116 2.6E-31 T 20-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 APS56_RS05090 235ea56548e7ffad85e5532b69ccb0f8 119 PANTHER PTHR34134 1 119 4.0E-35 T 20-04-2016 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 Gene3D G3DSA:1.10.10.10 165 218 2.0E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 214 2.1E-17 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 SUPERFAMILY SSF46894 158 220 4.08E-16 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 SMART SM00448 4 117 2.7E-35 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 SMART SM00421 159 216 3.9E-16 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 PANTHER PTHR26402 4 212 5.9E-65 T 20-04-2016 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 PANTHER PTHR26402:SF151 4 212 5.9E-65 T 20-04-2016 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 Gene3D G3DSA:3.40.50.2300 4 164 1.8E-40 T 20-04-2016 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 Pfam PF00072 Response regulator receiver domain 6 118 6.4E-31 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 SUPERFAMILY SSF52172 4 133 2.56E-35 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 1.2E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 1.2E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS00920 4ec8063dc730013be3747fb407f74319 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 1.2E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 SMART SM00418 6 84 9.4E-21 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 SUPERFAMILY SSF46785 6 96 2.66E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 Pfam PF12840 Helix-turn-helix domain 6 63 3.6E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 Gene3D G3DSA:1.10.10.10 6 105 6.4E-31 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 PANTHER PTHR33154:SF6 5 96 6.1E-21 T 20-04-2016 APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.7E-11 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.7E-11 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.7E-11 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS06930 13b7b68876c89afd260982d01fff327a 110 PANTHER PTHR33154 5 96 6.1E-21 T 20-04-2016 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 PANTHER PTHR24423 99 343 8.1E-71 T 20-04-2016 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 SMART SM00387 234 347 6.2E-36 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 SMART SM00388 120 187 8.6E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 SUPERFAMILY SSF55874 177 343 1.24E-43 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 SUPERFAMILY SSF47384 109 188 1.61E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 Gene3D G3DSA:3.30.565.10 193 343 8.7E-45 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 325 1.4E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 344 1.4E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 286 1.4E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 300 1.4E-14 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 Pfam PF00512 His Kinase A (phospho-acceptor) domain 121 185 4.6E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 235 346 3.5E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12410 20371564c3d8a20c8081d2b4d88c9470 347 Gene3D G3DSA:1.10.287.130 112 178 9.1E-13 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 88 194 4.4E-14 T 20-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 Pfam PF00703 Glycosyl hydrolases family 2 214 319 3.1E-18 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 SUPERFAMILY SSF51445 317 596 3.02E-50 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 SUPERFAMILY SSF49303 215 319 3.45E-17 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 Gene3D G3DSA:3.20.20.80 318 597 8.4E-44 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 PANTHER PTHR10066:SF46 553 722 9.7E-184 T 20-04-2016 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 PANTHER PTHR10066:SF46 26 526 9.7E-184 T 20-04-2016 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 Gene3D G3DSA:2.60.120.260 32 185 3.7E-38 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 SUPERFAMILY SSF49785 31 195 3.12E-41 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 Gene3D G3DSA:2.60.40.320 186 317 2.6E-24 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 327 448 6.1E-18 T 20-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 PANTHER PTHR10066 553 722 9.7E-184 T 20-04-2016 APS56_RS13760 468177a8c0870e76cdb87c3b83855787 886 PANTHER PTHR10066 26 526 9.7E-184 T 20-04-2016 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 Gene3D G3DSA:1.25.40.10 103 193 1.0E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 SUPERFAMILY SSF47384 272 350 1.41E-5 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 SUPERFAMILY SSF55874 341 508 1.7E-28 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 SMART SM00028 48 81 18.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 SMART SM00028 88 121 23.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 SMART SM00028 128 161 0.11 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 SMART SM00387 397 510 4.2E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 Gene3D G3DSA:3.30.565.10 366 508 3.1E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 SUPERFAMILY SSF48452 11 204 1.64E-20 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 509 4.7E-16 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 2.2E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 449 2.2E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 2.2E-8 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 Gene3D G3DSA:1.25.40.10 17 102 1.1E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 Pfam PF13424 Tetratricopeptide repeat 89 160 2.3E-11 T 20-04-2016 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 PANTHER PTHR24423 108 135 9.5E-30 T 20-04-2016 APS56_RS08225 07ad63b01b6d44fb55ec5cbef0e96cc8 510 PANTHER PTHR24423 263 508 9.5E-30 T 20-04-2016 APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 Gene3D G3DSA:2.160.20.10 386 780 3.5E-28 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SUPERFAMILY SSF51126 385 780 1.26E-20 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 Gene3D G3DSA:3.80.10.10 246 339 1.1E-9 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SUPERFAMILY SSF52058 61 177 1.02E-15 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SUPERFAMILY SSF52058 218 352 1.02E-15 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 Gene3D G3DSA:3.80.10.10 61 181 4.2E-13 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 798 866 2.1E-16 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SMART SM00710 505 536 6400.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SMART SM00710 138 184 2800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SMART SM00710 541 574 1700.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SMART SM00710 810 842 3100.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SMART SM00710 310 357 4200.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SMART SM00710 660 682 5800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01620 e8e9fc55651da222f9c7e309bbc95623 866 SMART SM00710 630 655 320.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 Gene3D G3DSA:1.20.1250.20 327 519 6.1E-8 T 20-04-2016 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 20 225 7.9E-60 T 20-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 Gene3D G3DSA:1.20.1250.20 42 211 1.0E-17 T 20-04-2016 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 Pfam PF00854 POT family 356 491 6.1E-18 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 Pfam PF00854 POT family 101 220 1.3E-33 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 PANTHER PTHR11654 19 290 2.9E-125 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 PANTHER PTHR11654 357 517 2.9E-125 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 PANTHER PTHR11654:SF119 19 290 2.9E-125 T 20-04-2016 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 PANTHER PTHR11654:SF119 357 517 2.9E-125 T 20-04-2016 APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 SUPERFAMILY SSF103473 318 522 2.49E-35 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 SUPERFAMILY SSF103473 21 222 2.49E-35 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS08560 407dbad80e20d937106187ec9bfb2105 528 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 164 176 - T 20-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS11945 2d6df9364cab8ed5727e10effa78b5ca 208 Gene3D G3DSA:3.90.470.20 114 205 7.2E-9 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APS56_RS11945 2d6df9364cab8ed5727e10effa78b5ca 208 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 104 205 1.5E-8 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APS56_RS11945 2d6df9364cab8ed5727e10effa78b5ca 208 SUPERFAMILY SSF56214 104 194 3.49E-8 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APS56_RS11945 2d6df9364cab8ed5727e10effa78b5ca 208 Gene3D G3DSA:3.90.470.20 32 113 6.9E-10 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APS56_RS11945 2d6df9364cab8ed5727e10effa78b5ca 208 SUPERFAMILY SSF56214 22 96 3.35E-7 T 20-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 SUPERFAMILY SSF55681 110 472 1.91E-94 T 20-04-2016 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 PANTHER PTHR22594 192 476 1.3E-225 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 PANTHER PTHR22594 17 173 1.3E-225 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 Gene3D G3DSA:3.30.930.10 102 474 2.3E-113 T 20-04-2016 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 Pfam PF00152 tRNA synthetases class II (D, K and N) 112 471 1.9E-86 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 SUPERFAMILY SSF50249 6 97 4.29E-13 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 PANTHER PTHR22594:SF6 192 476 1.3E-225 T 20-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 PANTHER PTHR22594:SF6 17 173 1.3E-225 T 20-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 PRINTS PR01042 Aspartyl-tRNA synthetase signature 217 230 4.7E-13 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 PRINTS PR01042 Aspartyl-tRNA synthetase signature 201 213 4.7E-13 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 PRINTS PR01042 Aspartyl-tRNA synthetase signature 392 408 4.7E-13 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 PRINTS PR01042 Aspartyl-tRNA synthetase signature 432 446 4.7E-13 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 477 1.6E-181 T 20-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 Gene3D G3DSA:2.40.50.140 3 98 7.5E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 Pfam PF01336 OB-fold nucleic acid binding domain 19 94 5.3E-8 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APS56_RS08150 564e3a7ba7e2876d36fe4fe14729687c 477 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 4 477 44.026 T 20-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 287 317 3.3E-16 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 114 1130 1.3E-226 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 Pfam PF07715 TonB-dependent Receptor Plug Domain 202 311 2.2E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 Gene3D G3DSA:2.40.170.20 1062 1130 1.7E-27 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 Gene3D G3DSA:2.40.170.20 418 493 1.7E-27 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 Gene3D G3DSA:2.40.170.20 532 897 1.7E-27 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 Gene3D G3DSA:2.40.170.20 970 1024 1.7E-27 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 Gene3D G3DSA:2.170.130.10 204 321 1.8E-22 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 SUPERFAMILY SSF56935 420 885 1.74E-65 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 SUPERFAMILY SSF56935 192 336 1.74E-65 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 SUPERFAMILY SSF56935 1046 1130 1.74E-65 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 SUPERFAMILY SSF56935 971 1005 1.74E-65 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 PANTHER PTHR11532:SF57 110 535 8.7E-209 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 PANTHER PTHR11532:SF57 611 1130 8.7E-209 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 Pfam PF13715 CarboxypepD_reg-like domain 114 194 2.3E-21 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 Gene3D G3DSA:2.60.40.1120 114 203 1.7E-15 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 PANTHER PTHR11532 110 535 8.7E-209 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 PANTHER PTHR11532 611 1130 8.7E-209 T 20-04-2016 APS56_RS09840 c21e50991522723355918d66e5e7f08e 1132 SUPERFAMILY SSF49464 113 192 9.94E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS04125 75a7cab56f227d6c213e3aaab358ed36 299 SUPERFAMILY SSF46955 8 75 7.78E-13 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS04125 75a7cab56f227d6c213e3aaab358ed36 299 SUPERFAMILY SSF52242 177 226 2.35E-5 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS04125 75a7cab56f227d6c213e3aaab358ed36 299 Gene3D G3DSA:3.40.50.280 180 224 1.2E-4 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS04125 75a7cab56f227d6c213e3aaab358ed36 299 Pfam PF13411 MerR HTH family regulatory protein 8 74 4.5E-15 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APS56_RS04125 75a7cab56f227d6c213e3aaab358ed36 299 Pfam PF02607 B12 binding domain 96 163 2.9E-8 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APS56_RS04125 75a7cab56f227d6c213e3aaab358ed36 299 SMART SM00422 8 77 1.1E-8 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APS56_RS04125 75a7cab56f227d6c213e3aaab358ed36 299 Gene3D G3DSA:1.10.1660.10 5 73 3.3E-13 T 20-04-2016 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 Gene3D G3DSA:3.30.1130.10 92 219 4.0E-50 T 20-04-2016 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 218 33.615 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 Pfam PF01227 GTP cyclohydrolase I 40 217 6.6E-65 T 20-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 PANTHER PTHR11109 34 220 1.7E-75 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 20-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 SUPERFAMILY SSF55620 13 218 1.11E-71 T 20-04-2016 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 Gene3D G3DSA:1.10.286.10 7 86 8.5E-28 T 20-04-2016 APS56_RS15485 1450d7dfff4c30e9a8b2a56f740f6976 223 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 218 9.7E-69 T 20-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 SUPERFAMILY SSF56935 882 926 7.33E-82 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 SUPERFAMILY SSF56935 80 223 7.33E-82 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 SUPERFAMILY SSF56935 445 803 7.33E-82 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 SUPERFAMILY SSF56935 286 374 7.33E-82 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 SUPERFAMILY SSF56935 961 1059 7.33E-82 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 2 1059 1.9E-231 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Gene3D G3DSA:2.170.130.10 88 199 5.9E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 SUPERFAMILY SSF49464 2 82 3.4E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 175 205 9.1E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Pfam PF13715 CarboxypepD_reg-like domain 3 84 8.1E-19 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 PANTHER PTHR11532:SF57 579 1057 8.1E-216 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 PANTHER PTHR11532:SF57 1 369 8.1E-216 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 PANTHER PTHR11532:SF57 515 544 8.1E-216 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Gene3D G3DSA:2.60.40.1120 2 87 6.6E-13 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Pfam PF07715 TonB-dependent Receptor Plug Domain 92 199 8.4E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Gene3D G3DSA:2.40.170.20 295 371 4.4E-46 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Gene3D G3DSA:2.40.170.20 440 821 4.4E-46 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Gene3D G3DSA:2.40.170.20 891 934 4.4E-46 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Gene3D G3DSA:2.40.170.20 200 219 4.4E-46 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 Gene3D G3DSA:2.40.170.20 971 1059 4.4E-46 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 PANTHER PTHR11532 579 1057 8.1E-216 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 PANTHER PTHR11532 1 369 8.1E-216 T 20-04-2016 APS56_RS15150 07d17ee817d8e00a5c8868b96f364901 1059 PANTHER PTHR11532 515 544 8.1E-216 T 20-04-2016 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 PANTHER PTHR11533:SF185 35 442 3.7E-64 T 20-04-2016 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 SUPERFAMILY SSF55486 217 445 2.78E-53 T 20-04-2016 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 PANTHER PTHR11533 35 442 3.7E-64 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 Pfam PF01433 Peptidase family M1 35 365 2.5E-50 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 270 280 1.4E-10 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 317 1.4E-10 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 321 333 1.4E-10 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 192 207 1.4E-10 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 SUPERFAMILY SSF63737 35 208 2.75E-23 T 20-04-2016 APS56_RS01110 4a02878af83a1a6d5dc6088496633779 657 Gene3D G3DSA:1.10.390.10 315 447 2.3E-22 T 20-04-2016 APS56_RS08410 3426a54b38c2ad3ba8adcd4e8a749632 138 Gene3D G3DSA:3.10.580.10 6 136 9.5E-31 T 20-04-2016 APS56_RS08410 3426a54b38c2ad3ba8adcd4e8a749632 138 SMART SM00116 14 61 4.4E-8 T 20-04-2016 IPR000644 CBS domain APS56_RS08410 3426a54b38c2ad3ba8adcd4e8a749632 138 SMART SM00116 88 135 7.8E-10 T 20-04-2016 IPR000644 CBS domain APS56_RS08410 3426a54b38c2ad3ba8adcd4e8a749632 138 SUPERFAMILY SSF54631 5 136 7.08E-32 T 20-04-2016 APS56_RS08410 3426a54b38c2ad3ba8adcd4e8a749632 138 PANTHER PTHR11911 7 134 2.1E-25 T 20-04-2016 APS56_RS08410 3426a54b38c2ad3ba8adcd4e8a749632 138 Pfam PF00571 CBS domain 81 135 6.3E-15 T 20-04-2016 IPR000644 CBS domain APS56_RS08410 3426a54b38c2ad3ba8adcd4e8a749632 138 Pfam PF00571 CBS domain 7 58 2.3E-9 T 20-04-2016 IPR000644 CBS domain APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 Gene3D G3DSA:1.10.260.40 3 60 2.3E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.0E-14 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 Pfam PF13407 Periplasmic binding protein domain 67 318 3.9E-26 T 20-04-2016 IPR025997 Periplasmic binding protein APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 SUPERFAMILY SSF47413 3 61 5.07E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 SUPERFAMILY SSF53822 63 342 2.02E-25 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 Gene3D G3DSA:3.40.50.2300 61 183 1.1E-12 T 20-04-2016 APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 Gene3D G3DSA:3.40.50.2300 184 333 9.5E-19 T 20-04-2016 APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 SMART SM00354 4 75 7.1E-14 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 PANTHER PTHR30146:SF29 3 346 1.3E-47 T 20-04-2016 APS56_RS13670 4ffe2adf3af216b5d6ed43d720c8f1f5 347 PANTHER PTHR30146 3 346 1.3E-47 T 20-04-2016 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 PRINTS PR00423 Cell division protein FtsZ signature 107 127 5.8E-38 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 PRINTS PR00423 Cell division protein FtsZ signature 197 219 5.8E-38 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 PRINTS PR00423 Cell division protein FtsZ signature 220 241 5.8E-38 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 PRINTS PR00423 Cell division protein FtsZ signature 135 156 5.8E-38 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 ProSitePatterns PS01134 FtsZ protein signature 1. 52 86 - T 20-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 Gene3D G3DSA:3.40.50.1440 22 224 3.1E-79 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 SMART SM00864 21 213 1.8E-93 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 SUPERFAMILY SSF52490 13 210 1.83E-58 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 PANTHER PTHR30314:SF3 1 408 2.0E-144 T 20-04-2016 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 PANTHER PTHR30314 1 408 2.0E-144 T 20-04-2016 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 22 182 4.4E-37 T 20-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 ProSitePatterns PS01135 FtsZ protein signature 2. 106 127 - T 20-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 SUPERFAMILY SSF55307 216 333 2.29E-32 T 20-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 17 353 33.122 T 20-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 Gene3D G3DSA:3.30.1330.20 225 332 4.2E-35 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 16 340 2.9E-106 T 20-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 SMART SM00865 216 334 1.9E-30 T 20-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APS56_RS08440 3403a1c94443f3dde5307fc4a96f6e09 657 Pfam PF12327 FtsZ family, C-terminal domain 230 325 4.6E-20 T 20-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APS56_RS16190 35aa0db6ff2fa641a425bcd2aad3e4f2 419 SUPERFAMILY SSF53383 24 401 7.31E-82 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS16190 35aa0db6ff2fa641a425bcd2aad3e4f2 419 Gene3D G3DSA:3.40.640.10 74 284 3.5E-66 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS16190 35aa0db6ff2fa641a425bcd2aad3e4f2 419 PANTHER PTHR13693 43 401 5.3E-97 T 20-04-2016 APS56_RS16190 35aa0db6ff2fa641a425bcd2aad3e4f2 419 Gene3D G3DSA:3.90.1150.10 285 399 1.0E-14 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS16190 35aa0db6ff2fa641a425bcd2aad3e4f2 419 Pfam PF00155 Aminotransferase class I and II 44 393 8.9E-41 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 Gene3D G3DSA:3.40.50.300 1 205 2.6E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 SUPERFAMILY SSF52540 1 216 2.13E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 2.8E-17 T 20-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 Gene3D G3DSA:3.40.50.300 398 492 4.5E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 SUPERFAMILY SSF52540 343 507 6.36E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 SUPERFAMILY SSF52540 239 313 6.36E-27 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 550 2.5E-137 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 PANTHER PTHR11059 2 549 1.2E-131 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APS56_RS16395 c4c1b2390488874caded0a6b07cf0b65 550 PIRSF PIRSF003128 1 550 1.3E-155 T 20-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APS56_RS11285 42bb02cc125d7a97e8f1fe2f98947056 569 PANTHER PTHR30255 2 564 4.1E-207 T 20-04-2016 APS56_RS11285 42bb02cc125d7a97e8f1fe2f98947056 569 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 560 9.2E-161 T 20-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APS56_RS11285 42bb02cc125d7a97e8f1fe2f98947056 569 SUPERFAMILY SSF64182 53 450 8.5E-118 T 20-04-2016 APS56_RS11285 42bb02cc125d7a97e8f1fe2f98947056 569 Pfam PF01368 DHH family 79 227 1.8E-13 T 20-04-2016 IPR001667 DDH domain APS56_RS11285 42bb02cc125d7a97e8f1fe2f98947056 569 Pfam PF02272 DHHA1 domain 372 435 3.6E-12 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APS56_RS11285 42bb02cc125d7a97e8f1fe2f98947056 569 PANTHER PTHR30255:SF2 2 564 4.1E-207 T 20-04-2016 APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 Gene3D G3DSA:2.40.170.20 224 746 3.4E-58 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 SUPERFAMILY SSF49464 20 103 1.57E-11 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 Pfam PF07715 TonB-dependent Receptor Plug Domain 119 220 2.4E-8 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 Pfam PF00593 TonB dependent receptor 474 746 6.0E-18 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 Gene3D G3DSA:2.60.40.1120 21 84 7.0E-7 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 Pfam PF13715 CarboxypepD_reg-like domain 21 104 2.7E-17 T 20-04-2016 APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 SUPERFAMILY SSF56935 102 746 8.85E-71 T 20-04-2016 APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 PANTHER PTHR11532 4 145 9.1E-20 T 20-04-2016 APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 PANTHER PTHR11532:SF57 4 145 9.1E-20 T 20-04-2016 APS56_RS08260 d9b53f5c2367e237dbcab241380c0410 748 Gene3D G3DSA:2.170.130.10 96 223 1.3E-11 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06950 6e45a11145aa40ee4849d3c68c3e69a2 131 Gene3D G3DSA:3.10.450.50 2 130 2.7E-27 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS06950 6e45a11145aa40ee4849d3c68c3e69a2 131 SUPERFAMILY SSF54427 1 130 1.7E-20 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS06950 6e45a11145aa40ee4849d3c68c3e69a2 131 Pfam PF12680 SnoaL-like domain 9 115 4.7E-7 T 20-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APS56_RS15565 665b3fb1fb0bfdbd200376d454c7084b 585 Pfam PF14322 Starch-binding associating with outer membrane 42 244 1.8E-17 T 20-04-2016 APS56_RS15565 665b3fb1fb0bfdbd200376d454c7084b 585 Pfam PF07980 SusD family 325 585 2.0E-47 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS15565 665b3fb1fb0bfdbd200376d454c7084b 585 Gene3D G3DSA:1.25.40.10 408 513 9.5E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15565 665b3fb1fb0bfdbd200376d454c7084b 585 Gene3D G3DSA:1.25.40.10 225 345 9.5E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15565 665b3fb1fb0bfdbd200376d454c7084b 585 SUPERFAMILY SSF48452 20 585 8.09E-88 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Gene3D G3DSA:1.25.40.10 36 133 1.4E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Gene3D G3DSA:1.25.40.10 134 215 9.0E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 200 233 0.32 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 30 63 160.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 404 437 65.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 268 301 0.26 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 336 369 310.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 370 403 1.7 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 98 131 9.4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 132 165 0.31 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 234 267 0.58 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 166 199 38.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SMART SM00028 302 335 4.6 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SUPERFAMILY SSF48452 28 266 3.35E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Gene3D G3DSA:1.25.40.10 216 320 3.5E-21 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Pfam PF13432 Tetratricopeptide repeat 206 257 0.0014 T 20-04-2016 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Pfam PF14559 Tetratricopeptide repeat 380 429 6.1E-6 T 20-04-2016 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 SUPERFAMILY SSF81901 202 436 4.71E-33 T 20-04-2016 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 PANTHER PTHR23083 23 419 1.1E-56 T 20-04-2016 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Pfam PF13181 Tetratricopeptide repeat 133 164 0.0013 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Pfam PF13181 Tetratricopeptide repeat 99 127 0.042 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Pfam PF13174 Tetratricopeptide repeat 270 299 0.0087 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Pfam PF13174 Tetratricopeptide repeat 168 197 0.0095 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03970 68e5c047d0b5d6eed58a473733146e0f 462 Gene3D G3DSA:1.25.40.10 321 434 9.8E-21 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 SUPERFAMILY SSF46557 4 79 4.58E-25 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 Pfam PF03449 Transcription elongation factor, N-terminal 6 75 1.3E-28 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 156 2.4E-54 T 20-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 30.59 T 20-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 SUPERFAMILY SSF54534 82 156 7.46E-19 T 20-04-2016 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 Gene3D G3DSA:1.10.287.180 4 76 1.1E-29 T 20-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 20-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 PANTHER PTHR30437 8 155 9.6E-56 T 20-04-2016 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 PIRSF PIRSF006092 1 157 1.1E-49 T 20-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 Gene3D G3DSA:3.10.50.30 77 156 1.6E-25 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APS56_RS12175 37691f659ca511190ca007f89b11e44f 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 156 1.7E-23 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 SMART SM00932 109 194 3.1E-28 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 SMART SM00932 6 92 1.1E-21 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 235 284 8.0E-13 T 20-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 PANTHER PTHR11178 109 299 8.4E-45 T 20-04-2016 APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 7 92 1.3E-23 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 109 194 6.7E-25 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 Pfam PF01106 NifU-like domain 228 293 2.0E-23 T 20-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 SUPERFAMILY SSF117916 218 296 2.4E-21 T 20-04-2016 APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 Gene3D G3DSA:3.30.1370.70 108 195 6.5E-22 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 Gene3D G3DSA:3.30.1370.70 6 92 2.1E-20 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 SUPERFAMILY SSF110836 108 195 5.89E-19 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APS56_RS13095 0b510aa6684d5599f83a904ce4c36485 300 SUPERFAMILY SSF110836 6 91 1.23E-15 T 20-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal APS56_RS02045 e5a9334c345f260ab1afa82b7e97d0b0 517 Pfam PF00072 Response regulator receiver domain 6 115 1.1E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS02045 e5a9334c345f260ab1afa82b7e97d0b0 517 SMART SM00448 4 115 2.3E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS02045 e5a9334c345f260ab1afa82b7e97d0b0 517 PANTHER PTHR26402 4 145 3.8E-31 T 20-04-2016 APS56_RS02045 e5a9334c345f260ab1afa82b7e97d0b0 517 Gene3D G3DSA:3.40.50.2300 2 133 9.5E-32 T 20-04-2016 APS56_RS02045 e5a9334c345f260ab1afa82b7e97d0b0 517 Pfam PF08665 PglZ domain 231 423 5.0E-28 T 20-04-2016 IPR013973 PglZ domain APS56_RS02045 e5a9334c345f260ab1afa82b7e97d0b0 517 SUPERFAMILY SSF53649 227 516 3.27E-10 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS02045 e5a9334c345f260ab1afa82b7e97d0b0 517 SUPERFAMILY SSF52172 1 140 9.11E-34 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS10785 126111b14cfc2af1156698c4d504a1a3 402 PANTHER PTHR12526 1 163 2.0E-37 T 20-04-2016 APS56_RS10785 126111b14cfc2af1156698c4d504a1a3 402 PANTHER PTHR12526 184 402 2.0E-37 T 20-04-2016 APS56_RS10785 126111b14cfc2af1156698c4d504a1a3 402 SUPERFAMILY SSF53756 173 401 1.2E-52 T 20-04-2016 APS56_RS10785 126111b14cfc2af1156698c4d504a1a3 402 SUPERFAMILY SSF53756 9 144 1.2E-52 T 20-04-2016 APS56_RS10785 126111b14cfc2af1156698c4d504a1a3 402 Pfam PF13439 Glycosyltransferase Family 4 13 217 6.8E-14 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS10785 126111b14cfc2af1156698c4d504a1a3 402 Pfam PF00534 Glycosyl transferases group 1 229 363 6.3E-25 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS10785 126111b14cfc2af1156698c4d504a1a3 402 Gene3D G3DSA:3.40.50.2000 233 353 4.0E-14 T 20-04-2016 APS56_RS07980 94dadfe7605bc170dd8f482e17abee64 234 TIGRFAM TIGR04283 glyco_like_mftF: transferase 2, rSAM/selenodomain-associated 8 229 2.1E-69 T 20-04-2016 IPR026461 Transferase 2, rSAM/selenodomain-associated APS56_RS07980 94dadfe7605bc170dd8f482e17abee64 234 PANTHER PTHR10859 7 177 1.1E-23 T 20-04-2016 APS56_RS07980 94dadfe7605bc170dd8f482e17abee64 234 SUPERFAMILY SSF53448 6 213 2.39E-34 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS07980 94dadfe7605bc170dd8f482e17abee64 234 Pfam PF00535 Glycosyl transferase family 2 9 156 1.7E-21 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS07980 94dadfe7605bc170dd8f482e17abee64 234 Gene3D G3DSA:3.90.550.10 7 190 3.2E-23 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS07980 94dadfe7605bc170dd8f482e17abee64 234 PANTHER PTHR10859:SF92 7 177 1.1E-23 T 20-04-2016 APS56_RS09735 50e1fb03089ae0d0acd74679b27573b6 479 Pfam PF14707 C-terminal region of aryl-sulfatase 361 449 7.0E-11 T 20-04-2016 APS56_RS09735 50e1fb03089ae0d0acd74679b27573b6 479 Pfam PF00884 Sulfatase 34 335 2.3E-72 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09735 50e1fb03089ae0d0acd74679b27573b6 479 Gene3D G3DSA:3.30.1120.10 350 446 4.4E-16 T 20-04-2016 APS56_RS09735 50e1fb03089ae0d0acd74679b27573b6 479 PANTHER PTHR10342:SF199 6 477 9.3E-158 T 20-04-2016 APS56_RS09735 50e1fb03089ae0d0acd74679b27573b6 479 PANTHER PTHR10342 6 477 9.3E-158 T 20-04-2016 APS56_RS09735 50e1fb03089ae0d0acd74679b27573b6 479 Gene3D G3DSA:3.40.720.10 32 349 2.2E-110 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09735 50e1fb03089ae0d0acd74679b27573b6 479 SUPERFAMILY SSF53649 33 448 3.4E-128 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 SUPERFAMILY SSF51735 10 254 2.22E-75 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.2E-41 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 3.9E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 3.9E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 3.9E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 Gene3D G3DSA:3.40.50.720 6 253 4.1E-80 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PANTHER PTHR24322:SF330 15 143 1.1E-43 T 20-04-2016 APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PANTHER PTHR24322:SF330 159 191 1.1E-43 T 20-04-2016 APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 252 7.8E-59 T 20-04-2016 APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PANTHER PTHR24322 15 143 1.1E-43 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00550 07f7fd67a92f53131753b5dec2e250cd 263 PANTHER PTHR24322 159 191 1.1E-43 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS07535 2f8a9eafc6f523522a57f2b0a2a64b4c 318 Pfam PF01261 Xylose isomerase-like TIM barrel 117 241 3.2E-11 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS07535 2f8a9eafc6f523522a57f2b0a2a64b4c 318 Gene3D G3DSA:3.20.20.150 52 299 3.7E-32 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS07535 2f8a9eafc6f523522a57f2b0a2a64b4c 318 SUPERFAMILY SSF51658 59 298 1.96E-35 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 PANTHER PTHR23152 5 912 0.0 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 Pfam PF02779 Transketolase, pyrimidine binding domain 578 773 6.1E-61 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 5 43 8.7E-14 T 20-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 SUPERFAMILY SSF52518 101 507 6.33E-75 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 776 911 1.1E-38 T 20-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 6 910 1.1E-301 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 Gene3D G3DSA:3.40.50.970 140 521 3.3E-61 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 SUPERFAMILY SSF52518 562 779 2.52E-52 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 PIRSF PIRSF000157 1 913 0.0 T 20-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 Gene3D G3DSA:3.40.50.970 592 778 1.2E-22 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 Pfam PF00676 Dehydrogenase E1 component 189 507 2.2E-50 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 PANTHER PTHR23152:SF4 5 912 0.0 T 20-04-2016 APS56_RS09135 e89acd757a8c458bba5aa85a43f81902 914 SMART SM00861 579 772 2.4E-47 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PANTHER PTHR22912:SF140 4 377 4.0E-84 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 SUPERFAMILY SSF51905 1 282 7.21E-39 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 Gene3D G3DSA:3.50.50.60 2 100 1.0E-21 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PANTHER PTHR22912 4 377 4.0E-84 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 170 2.5E-12 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.5E-12 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 2.5E-12 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 288 2.5E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.0E-25 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.0E-25 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 2.0E-25 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 97 115 2.0E-25 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 233 249 2.0E-25 T 20-04-2016 APS56_RS08005 bc507eaf347566591b0ed13955da1be7 445 Gene3D G3DSA:3.50.50.60 101 312 1.6E-44 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 SMART SM00382 26 237 1.9E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 SMART SM00382 352 525 2.6E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 Pfam PF12848 ABC transporter 231 311 1.4E-22 T 20-04-2016 IPR032781 ABC-transporter extension domain APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 SUPERFAMILY SSF52540 5 244 8.89E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 PANTHER PTHR19211:SF60 1 575 1.0E-252 T 20-04-2016 APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 Pfam PF00005 ABC transporter 18 192 1.0E-24 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 Pfam PF00005 ABC transporter 343 473 6.5E-21 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 Gene3D G3DSA:3.40.50.300 2 88 1.1E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 Gene3D G3DSA:3.40.50.300 125 278 1.1E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 Gene3D G3DSA:3.40.50.300 325 556 5.6E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 SUPERFAMILY SSF52540 304 530 1.7E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07160 cf6482fb79c5b5f87337516c7e501f26 634 PANTHER PTHR19211 1 575 1.0E-252 T 20-04-2016 APS56_RS06170 8cba4d2fd3c15223ede3f0df08851437 459 Pfam PF07980 SusD family 288 457 2.6E-31 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS06170 8cba4d2fd3c15223ede3f0df08851437 459 Pfam PF14322 Starch-binding associating with outer membrane 3 201 1.4E-19 T 20-04-2016 APS56_RS06170 8cba4d2fd3c15223ede3f0df08851437 459 SUPERFAMILY SSF48452 3 457 2.02E-89 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06170 8cba4d2fd3c15223ede3f0df08851437 459 Gene3D G3DSA:1.25.40.10 182 386 2.3E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03335 4902f8dcacecb564ac543f833947505d 561 Gene3D G3DSA:2.70.70.10 14 172 9.3E-33 T 20-04-2016 APS56_RS03335 4902f8dcacecb564ac543f833947505d 561 Pfam PF01551 Peptidase family M23 134 169 9.5E-8 T 20-04-2016 IPR016047 Peptidase M23 APS56_RS03335 4902f8dcacecb564ac543f833947505d 561 Pfam PF01551 Peptidase family M23 48 116 3.3E-10 T 20-04-2016 IPR016047 Peptidase M23 APS56_RS03335 4902f8dcacecb564ac543f833947505d 561 SUPERFAMILY SSF51261 20 172 3.56E-29 T 20-04-2016 IPR011055 Duplicated hybrid motif APS56_RS03335 4902f8dcacecb564ac543f833947505d 561 PANTHER PTHR21666 135 192 1.5E-26 T 20-04-2016 APS56_RS03335 4902f8dcacecb564ac543f833947505d 561 PANTHER PTHR21666 2 117 1.5E-26 T 20-04-2016 APS56_RS11720 b1eb8125e6a07e5c69b0ea371352295f 253 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 251 1.8E-82 T 20-04-2016 APS56_RS11720 b1eb8125e6a07e5c69b0ea371352295f 253 Gene3D G3DSA:3.60.10.10 1 252 4.4E-87 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11720 b1eb8125e6a07e5c69b0ea371352295f 253 PANTHER PTHR22748 1 253 9.5E-101 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APS56_RS11720 b1eb8125e6a07e5c69b0ea371352295f 253 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 251 2.8E-88 T 20-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APS56_RS11720 b1eb8125e6a07e5c69b0ea371352295f 253 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 20-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APS56_RS11720 b1eb8125e6a07e5c69b0ea371352295f 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 5 244 3.2E-27 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11720 b1eb8125e6a07e5c69b0ea371352295f 253 SUPERFAMILY SSF56219 1 251 1.13E-73 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS14915 e3bf9958d6d932ebd1fbe5d914e152b6 506 Gene3D G3DSA:3.40.630.30 9 189 2.2E-12 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS14915 e3bf9958d6d932ebd1fbe5d914e152b6 506 PANTHER PTHR23088:SF12 207 506 4.4E-138 T 20-04-2016 APS56_RS14915 e3bf9958d6d932ebd1fbe5d914e152b6 506 SUPERFAMILY SSF55729 5 138 1.28E-11 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS14915 e3bf9958d6d932ebd1fbe5d914e152b6 506 Gene3D G3DSA:3.60.110.10 216 503 4.4E-56 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS14915 e3bf9958d6d932ebd1fbe5d914e152b6 506 PANTHER PTHR23088 207 506 4.4E-138 T 20-04-2016 APS56_RS14915 e3bf9958d6d932ebd1fbe5d914e152b6 506 Pfam PF00795 Carbon-nitrogen hydrolase 227 484 8.1E-32 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS14915 e3bf9958d6d932ebd1fbe5d914e152b6 506 SUPERFAMILY SSF56317 221 490 6.54E-57 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS01450 a30dfb3519ede35333564a086e3a5b3c 401 PANTHER PTHR30097:SF5 33 369 3.9E-55 T 20-04-2016 APS56_RS01450 a30dfb3519ede35333564a086e3a5b3c 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 76 310 1.5E-36 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APS56_RS01450 a30dfb3519ede35333564a086e3a5b3c 401 PANTHER PTHR30097 33 369 3.9E-55 T 20-04-2016 APS56_RS01450 a30dfb3519ede35333564a086e3a5b3c 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 69 368 9.8E-43 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APS56_RS01450 a30dfb3519ede35333564a086e3a5b3c 401 SUPERFAMILY SSF111369 89 315 1.18E-18 T 20-04-2016 APS56_RS01450 a30dfb3519ede35333564a086e3a5b3c 401 Gene3D G3DSA:1.20.1600.10 146 190 7.4E-4 T 20-04-2016 APS56_RS01450 a30dfb3519ede35333564a086e3a5b3c 401 Gene3D G3DSA:2.40.50.100 87 123 8.8E-13 T 20-04-2016 APS56_RS01450 a30dfb3519ede35333564a086e3a5b3c 401 Gene3D G3DSA:2.40.50.100 200 236 8.8E-13 T 20-04-2016 APS56_RS10280 eb3f813e2db94da9e2b4d8d2e628fd38 156 Pfam PF13648 Lipocalin-like domain 29 98 2.6E-7 T 20-04-2016 IPR024311 Lipocalin-like domain APS56_RS09860 b851b446d5e6e95313b376e82aa224f4 470 PANTHER PTHR22953 95 349 5.3E-15 T 20-04-2016 APS56_RS09860 b851b446d5e6e95313b376e82aa224f4 470 SUPERFAMILY SSF56300 186 469 1.37E-17 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS09860 b851b446d5e6e95313b376e82aa224f4 470 Gene3D G3DSA:3.60.21.10 186 470 2.8E-17 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS09860 b851b446d5e6e95313b376e82aa224f4 470 PANTHER PTHR22953:SF40 95 349 5.3E-15 T 20-04-2016 APS56_RS09860 b851b446d5e6e95313b376e82aa224f4 470 Pfam PF09423 PhoD-like phosphatase 171 417 3.9E-18 T 20-04-2016 IPR018946 Alkaline phosphatase D-related APS56_RS02925 7dcd12052e7a8f0990665cdc7952fafc 309 SUPERFAMILY SSF75005 15 299 2.09E-50 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS02925 7dcd12052e7a8f0990665cdc7952fafc 309 PANTHER PTHR22925 1 305 2.3E-47 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS02925 7dcd12052e7a8f0990665cdc7952fafc 309 Pfam PF04616 Glycosyl hydrolases family 43 42 299 1.4E-33 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS02925 7dcd12052e7a8f0990665cdc7952fafc 309 Gene3D G3DSA:2.115.10.20 16 299 7.7E-54 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS02925 7dcd12052e7a8f0990665cdc7952fafc 309 PANTHER PTHR22925:SF37 1 305 2.3E-47 T 20-04-2016 APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 SUPERFAMILY SSF103088 167 278 1.44E-15 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 PRINTS PR01021 OMPA domain signature 72 88 7.0E-5 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 PRINTS PR01021 OMPA domain signature 57 72 7.0E-5 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 PANTHER PTHR30128:SF16 18 239 5.4E-13 T 20-04-2016 APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 PANTHER PTHR30128 18 239 5.4E-13 T 20-04-2016 APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 SUPERFAMILY SSF103088 21 132 3.92E-17 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 Gene3D G3DSA:3.30.1330.60 20 130 2.1E-17 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 Gene3D G3DSA:3.30.1330.60 170 279 6.0E-16 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 Pfam PF00691 OmpA family 184 257 1.1E-7 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS10945 9ea946f7c2603d9fe19cd1b42cf03531 286 Pfam PF00691 OmpA family 26 105 3.7E-10 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS05380 04ab8f5bef43e35bf13e6f3e3b3e67c9 383 Pfam PF05050 Methyltransferase FkbM domain 201 360 4.0E-19 T 20-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APS56_RS05380 04ab8f5bef43e35bf13e6f3e3b3e67c9 383 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 198 338 1.6E-21 T 20-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APS56_RS05380 04ab8f5bef43e35bf13e6f3e3b3e67c9 383 SUPERFAMILY SSF53335 62 109 5.4E-48 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS05380 04ab8f5bef43e35bf13e6f3e3b3e67c9 383 SUPERFAMILY SSF53335 163 377 5.4E-48 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS05380 04ab8f5bef43e35bf13e6f3e3b3e67c9 383 Gene3D G3DSA:3.40.50.150 193 377 7.5E-48 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS10555 242e95ae2beb153a8981ce5cc43fa4a7 76 SUPERFAMILY SSF54862 2 73 5.87E-10 T 20-04-2016 APS56_RS10555 242e95ae2beb153a8981ce5cc43fa4a7 76 Gene3D G3DSA:3.30.70.20 4 75 3.8E-14 T 20-04-2016 APS56_RS10555 242e95ae2beb153a8981ce5cc43fa4a7 76 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 8 73 2.5E-13 T 20-04-2016 APS56_RS10555 242e95ae2beb153a8981ce5cc43fa4a7 76 PRINTS PR00352 3Fe-4S ferredoxin signature 6 17 6.5E-5 T 20-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 APS56_RS10555 242e95ae2beb153a8981ce5cc43fa4a7 76 PRINTS PR00352 3Fe-4S ferredoxin signature 59 71 6.5E-5 T 20-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 APS56_RS10555 242e95ae2beb153a8981ce5cc43fa4a7 76 PRINTS PR00352 3Fe-4S ferredoxin signature 17 27 6.5E-5 T 20-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 APS56_RS15820 236a81136de8a5c52bff1cc3fcf5bf85 187 SUPERFAMILY SSF143456 6 183 2.75E-48 T 20-04-2016 APS56_RS15820 236a81136de8a5c52bff1cc3fcf5bf85 187 Gene3D G3DSA:3.40.1740.10 127 174 2.1E-22 T 20-04-2016 APS56_RS15820 236a81136de8a5c52bff1cc3fcf5bf85 187 Gene3D G3DSA:3.40.1740.10 3 45 2.1E-22 T 20-04-2016 APS56_RS15820 236a81136de8a5c52bff1cc3fcf5bf85 187 PANTHER PTHR30327:SF1 1 187 2.1E-34 T 20-04-2016 APS56_RS15820 236a81136de8a5c52bff1cc3fcf5bf85 187 PANTHER PTHR30327 1 187 2.1E-34 T 20-04-2016 APS56_RS15820 236a81136de8a5c52bff1cc3fcf5bf85 187 Pfam PF02622 Uncharacterized ACR, COG1678 20 170 1.7E-39 T 20-04-2016 IPR003774 Protein of unknown function UPF0301 APS56_RS15820 236a81136de8a5c52bff1cc3fcf5bf85 187 Gene3D G3DSA:3.30.70.1300 60 126 1.5E-8 T 20-04-2016 APS56_RS07155 318f03f3cf86c0aa1b3c203105d9fcc6 376 PANTHER PTHR30469:SF15 1 321 8.7E-19 T 20-04-2016 APS56_RS07155 318f03f3cf86c0aa1b3c203105d9fcc6 376 Gene3D G3DSA:2.40.50.100 68 102 5.4E-10 T 20-04-2016 APS56_RS07155 318f03f3cf86c0aa1b3c203105d9fcc6 376 Gene3D G3DSA:2.40.50.100 187 219 5.4E-10 T 20-04-2016 APS56_RS07155 318f03f3cf86c0aa1b3c203105d9fcc6 376 SUPERFAMILY SSF111369 178 295 3.53E-7 T 20-04-2016 APS56_RS07155 318f03f3cf86c0aa1b3c203105d9fcc6 376 PANTHER PTHR30469 1 321 8.7E-19 T 20-04-2016 APS56_RS07155 318f03f3cf86c0aa1b3c203105d9fcc6 376 SUPERFAMILY SSF111369 58 119 5.89E-5 T 20-04-2016 APS56_RS07155 318f03f3cf86c0aa1b3c203105d9fcc6 376 Pfam PF13437 HlyD family secretion protein 190 283 1.8E-15 T 20-04-2016 APS56_RS11855 f35f692da91041ad338ddda7d75478cb 169 Pfam PF10652 Protein of unknown function (DUF2480) 3 167 5.0E-78 T 20-04-2016 IPR018914 Protein of unknown function DUF2480 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 PANTHER PTHR19375 6 328 1.4E-136 T 20-04-2016 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 SUPERFAMILY SSF53067 10 147 8.74E-28 T 20-04-2016 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 Gene3D G3DSA:3.30.420.40 264 318 6.8E-33 T 20-04-2016 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 Gene3D G3DSA:3.30.420.40 159 185 6.8E-33 T 20-04-2016 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 Pfam PF06723 MreB/Mbl protein 9 336 2.2E-122 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 336 1.2E-119 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 Gene3D G3DSA:3.90.640.10 186 259 3.8E-25 T 20-04-2016 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 Gene3D G3DSA:3.30.420.40 10 158 1.5E-34 T 20-04-2016 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 65 88 1.6E-46 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 186 206 1.6E-46 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 301 327 1.6E-46 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 45 63 1.6E-46 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 131 150 1.6E-46 T 20-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 SMART SM00268 8 341 0.0039 T 20-04-2016 IPR004000 Actin family APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 PANTHER PTHR19375:SF117 6 328 1.4E-136 T 20-04-2016 APS56_RS08215 70fd4cf0fd3c1e898b5618275bffbcda 342 SUPERFAMILY SSF53067 149 338 4.19E-46 T 20-04-2016 APS56_RS11235 c57f527b88e0ab8d84d88c84a91ad099 318 Gene3D G3DSA:3.40.630.10 20 308 2.7E-66 T 20-04-2016 APS56_RS11235 c57f527b88e0ab8d84d88c84a91ad099 318 Pfam PF04389 Peptidase family M28 97 289 1.7E-49 T 20-04-2016 IPR007484 Peptidase M28 APS56_RS11235 c57f527b88e0ab8d84d88c84a91ad099 318 PANTHER PTHR12147 22 309 2.8E-51 T 20-04-2016 APS56_RS11235 c57f527b88e0ab8d84d88c84a91ad099 318 SUPERFAMILY SSF53187 16 307 1.41E-62 T 20-04-2016 APS56_RS07000 495af4c3014e11f680c61f7d0e974556 341 Pfam PF01734 Patatin-like phospholipase 9 209 1.1E-20 T 20-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APS56_RS07000 495af4c3014e11f680c61f7d0e974556 341 PANTHER PTHR32176 8 280 9.2E-36 T 20-04-2016 APS56_RS07000 495af4c3014e11f680c61f7d0e974556 341 Gene3D G3DSA:3.40.1090.10 2 325 7.4E-81 T 20-04-2016 APS56_RS07000 495af4c3014e11f680c61f7d0e974556 341 SUPERFAMILY SSF52151 4 331 1.49E-47 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.508 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 Gene3D G3DSA:3.90.1170.10 23 137 2.2E-52 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 7.7E-57 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 4.7E-35 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 4.7E-35 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 4.7E-35 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 4.7E-35 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 5.2E-49 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 20-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 SUPERFAMILY SSF54686 1 137 2.49E-56 T 20-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 20-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13980 7b1bcff679ef0c3969218c46bbffbcbf 139 PANTHER PTHR12220 1 139 4.2E-71 T 20-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APS56_RS08035 ba8425e9f8c1898911ba5eeeafc7b048 605 SUPERFAMILY SSF52242 447 597 3.45E-24 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS08035 ba8425e9f8c1898911ba5eeeafc7b048 605 Gene3D G3DSA:3.20.20.240 38 452 3.9E-86 T 20-04-2016 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain GO:0008152|GO:0016866|GO:0031419 APS56_RS08035 ba8425e9f8c1898911ba5eeeafc7b048 605 SUPERFAMILY SSF51703 6 498 5.49E-93 T 20-04-2016 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 APS56_RS08035 ba8425e9f8c1898911ba5eeeafc7b048 605 Gene3D G3DSA:3.40.50.280 464 596 3.3E-28 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS08035 ba8425e9f8c1898911ba5eeeafc7b048 605 PANTHER PTHR23408:SF13 189 428 5.8E-47 T 20-04-2016 APS56_RS08035 ba8425e9f8c1898911ba5eeeafc7b048 605 PANTHER PTHR23408 189 428 5.8E-47 T 20-04-2016 APS56_RS08035 ba8425e9f8c1898911ba5eeeafc7b048 605 Pfam PF01642 Methylmalonyl-CoA mutase 81 501 1.4E-77 T 20-04-2016 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 183 325 9.9E-48 T 20-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PANTHER PTHR11728:SF1 1 331 1.5E-80 T 20-04-2016 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 SUPERFAMILY SSF51735 3 183 5.38E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 Gene3D G3DSA:3.40.50.720 1 186 1.0E-40 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 Gene3D G3DSA:1.10.1040.10 187 330 3.9E-48 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 5.4E-30 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 5.4E-30 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 241 258 5.4E-30 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 9 26 5.4E-30 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 176 200 5.4E-30 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 5.4E-30 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 SUPERFAMILY SSF48179 183 329 1.46E-41 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 8.0E-29 T 20-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PANTHER PTHR11728 1 331 1.5E-80 T 20-04-2016 APS56_RS10110 a248fa6647513f1a7aa4bf1d6c3463ae 333 PIRSF PIRSF000114 1 332 8.5E-84 T 20-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APS56_RS13545 b6d0fda33b8894a774f4518711730a2e 284 TIGRFAM TIGR04549 LP_HExxH_w_tonB: substrate import-associated zinc metallohydrolase lipoprotein 29 280 1.6E-83 T 20-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein APS56_RS13545 b6d0fda33b8894a774f4518711730a2e 284 Pfam PF15890 Putative zinc-binding metallo-peptidase 40 268 7.2E-77 T 20-04-2016 IPR030890 Substrate import-associated zinc metallohydrolase lipoprotein APS56_RS13545 b6d0fda33b8894a774f4518711730a2e 284 Gene3D G3DSA:3.40.390.10 121 231 5.6E-4 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 PANTHER PTHR10489 504 688 4.2E-16 T 20-04-2016 APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 Gene3D G3DSA:3.20.20.80 156 320 2.2E-11 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 Gene3D G3DSA:2.60.40.1180 400 480 5.1E-4 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 Gene3D G3DSA:2.60.40.10 510 575 5.6E-6 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 SMART SM00060 668 747 0.28 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 SMART SM00060 579 653 1.0E-5 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 SMART SM00060 491 566 5.4 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 SUPERFAMILY SSF49265 486 575 1.06E-9 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 SUPERFAMILY SSF49265 586 751 1.14E-19 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 Gene3D G3DSA:2.60.40.10 671 748 4.2E-9 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 Gene3D G3DSA:2.60.40.10 578 659 3.2E-9 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS15535 15933ad036c1a0de4ddc5cc6ccde943c 864 SUPERFAMILY SSF51445 32 315 2.26E-20 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS08545 40454117f6418cb208418bfca36e2c04 680 Pfam PF03772 Competence protein 235 502 2.4E-59 T 20-04-2016 IPR004477 ComEC/Rec2-related protein APS56_RS08545 40454117f6418cb208418bfca36e2c04 680 Pfam PF13567 Domain of unknown function (DUF4131) 16 191 3.1E-21 T 20-04-2016 IPR025405 Domain of unknown function DUF4131 APS56_RS08545 40454117f6418cb208418bfca36e2c04 680 PANTHER PTHR30619 8 520 3.7E-58 T 20-04-2016 APS56_RS08545 40454117f6418cb208418bfca36e2c04 680 PANTHER PTHR30619:SF2 8 520 3.7E-58 T 20-04-2016 APS56_RS08545 40454117f6418cb208418bfca36e2c04 680 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 256 434 2.0E-26 T 20-04-2016 IPR004477 ComEC/Rec2-related protein APS56_RS06795 66fc3f501bc83ee56d6f376f70c2e82e 245 PANTHER PTHR11019 1 243 5.6E-19 T 20-04-2016 APS56_RS06795 66fc3f501bc83ee56d6f376f70c2e82e 245 SUPERFAMILY SSF46689 197 243 4.03E-6 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06795 66fc3f501bc83ee56d6f376f70c2e82e 245 Pfam PF12833 Helix-turn-helix domain 173 243 2.7E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06795 66fc3f501bc83ee56d6f376f70c2e82e 245 SMART SM00342 161 245 1.8E-15 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06795 66fc3f501bc83ee56d6f376f70c2e82e 245 Gene3D G3DSA:1.10.10.60 199 243 4.1E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06795 66fc3f501bc83ee56d6f376f70c2e82e 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS06795 66fc3f501bc83ee56d6f376f70c2e82e 245 PANTHER PTHR11019:SF126 1 243 5.6E-19 T 20-04-2016 APS56_RS06795 66fc3f501bc83ee56d6f376f70c2e82e 245 Gene3D G3DSA:1.10.10.60 145 198 1.6E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS12655 63bfd1636fa2fd24c2a1890e5b6e38ad 420 PANTHER PTHR33886 49 420 5.3E-154 T 20-04-2016 APS56_RS12655 63bfd1636fa2fd24c2a1890e5b6e38ad 420 SUPERFAMILY SSF48208 77 419 1.62E-68 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS12655 63bfd1636fa2fd24c2a1890e5b6e38ad 420 Pfam PF07470 Glycosyl Hydrolase Family 88 53 418 4.8E-106 T 20-04-2016 IPR010905 Glycosyl hydrolase, family 88 APS56_RS12655 63bfd1636fa2fd24c2a1890e5b6e38ad 420 Gene3D G3DSA:1.50.10.10 51 420 5.1E-123 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS12655 63bfd1636fa2fd24c2a1890e5b6e38ad 420 PANTHER PTHR33886:SF3 49 420 5.3E-154 T 20-04-2016 APS56_RS10130 e58c88189f8f0629dd56e91eae7a89f0 779 SUPERFAMILY SSF63829 42 192 7.19E-6 T 20-04-2016 APS56_RS10130 e58c88189f8f0629dd56e91eae7a89f0 779 Gene3D G3DSA:2.120.10.30 584 670 5.0E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS10130 e58c88189f8f0629dd56e91eae7a89f0 779 Gene3D G3DSA:2.120.10.30 447 557 0.001 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS03255 a45aba75412c6fbd670080704b708d21 249 Pfam PF08239 Bacterial SH3 domain 13 62 1.4E-7 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APS56_RS03255 a45aba75412c6fbd670080704b708d21 249 SUPERFAMILY SSF82057 15 64 1.1E-5 T 20-04-2016 APS56_RS03255 a45aba75412c6fbd670080704b708d21 249 Gene3D G3DSA:2.30.30.40 15 65 1.2E-5 T 20-04-2016 APS56_RS03255 a45aba75412c6fbd670080704b708d21 249 Pfam PF00877 NlpC/P60 family 137 230 3.2E-21 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS03255 a45aba75412c6fbd670080704b708d21 249 SUPERFAMILY SSF54001 122 227 6.54E-32 T 20-04-2016 APS56_RS03255 a45aba75412c6fbd670080704b708d21 249 Gene3D G3DSA:3.90.1720.10 122 236 4.2E-33 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS03255 a45aba75412c6fbd670080704b708d21 249 PANTHER PTHR21666 125 230 5.0E-22 T 20-04-2016 APS56_RS03255 a45aba75412c6fbd670080704b708d21 249 PANTHER PTHR21666:SF186 125 230 5.0E-22 T 20-04-2016 APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 Pfam PF00270 DEAD/DEAH box helicase 26 195 1.5E-51 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 PANTHER PTHR24031 1 429 8.7E-179 T 20-04-2016 APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 Gene3D G3DSA:3.40.50.300 1 210 5.0E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 SUPERFAMILY SSF52540 73 359 2.93E-73 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 PANTHER PTHR24031:SF0 1 429 8.7E-179 T 20-04-2016 APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 20-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 SMART SM00487 20 221 1.2E-59 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 Pfam PF00271 Helicase conserved C-terminal domain 231 338 4.3E-26 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 Gene3D G3DSA:3.40.50.300 211 368 1.1E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14890 23b4bc13852914798c8b8e314600b3cd 429 SMART SM00490 257 338 2.8E-30 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS05875 11d607a23b053c61e241f0ae37258f2d 112 PANTHER PTHR34389:SF3 3 112 1.2E-30 T 20-04-2016 APS56_RS05875 11d607a23b053c61e241f0ae37258f2d 112 SUPERFAMILY SSF54909 4 112 6.97E-26 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel APS56_RS05875 11d607a23b053c61e241f0ae37258f2d 112 Pfam PF05336 Domain of unknown function (DUF718) 6 112 1.2E-28 T 20-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 APS56_RS05875 11d607a23b053c61e241f0ae37258f2d 112 PANTHER PTHR34389 3 112 1.2E-30 T 20-04-2016 APS56_RS01530 8da4256ce0c458eb09bc15aea363c140 204 SUPERFAMILY SSF56529 2 195 2.88E-53 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS01530 8da4256ce0c458eb09bc15aea363c140 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 2 194 1.5E-44 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS01530 8da4256ce0c458eb09bc15aea363c140 204 Gene3D G3DSA:3.90.850.10 2 196 2.4E-59 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS01530 8da4256ce0c458eb09bc15aea363c140 204 PANTHER PTHR11820:SF7 2 203 6.5E-61 T 20-04-2016 APS56_RS01530 8da4256ce0c458eb09bc15aea363c140 204 PANTHER PTHR11820 2 203 6.5E-61 T 20-04-2016 APS56_RS02465 fa12aa5bd810f581de73722184c6a89b 209 PANTHER PTHR23026:SF101 1 209 5.6E-33 T 20-04-2016 APS56_RS02465 fa12aa5bd810f581de73722184c6a89b 209 Gene3D G3DSA:3.40.109.10 1 207 1.9E-52 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APS56_RS02465 fa12aa5bd810f581de73722184c6a89b 209 Pfam PF00881 Nitroreductase family 8 185 9.9E-17 T 20-04-2016 IPR029479 Nitroreductase APS56_RS02465 fa12aa5bd810f581de73722184c6a89b 209 SUPERFAMILY SSF55469 1 208 4.58E-45 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APS56_RS02465 fa12aa5bd810f581de73722184c6a89b 209 PANTHER PTHR23026 1 209 5.6E-33 T 20-04-2016 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Pfam PF01926 50S ribosome-binding GTPase 224 342 1.9E-25 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 125 2.0E-38 T 20-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 467 32.894 T 20-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 PANTHER PTHR11649 8 467 2.6E-134 T 20-04-2016 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 PANTHER PTHR11649:SF56 8 467 2.6E-134 T 20-04-2016 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Pfam PF12631 MnmE helical domain 128 464 2.0E-51 T 20-04-2016 IPR025867 MnmE, helical domain APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 SUPERFAMILY SSF52540 78 157 2.23E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 SUPERFAMILY SSF52540 193 383 2.23E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Gene3D G3DSA:3.40.50.300 291 396 3.4E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Gene3D G3DSA:3.40.50.300 217 252 6.8E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Gene3D G3DSA:3.30.1360.120 1 126 1.0E-45 T 20-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 222 380 3.9E-20 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 467 2.4E-124 T 20-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 SUPERFAMILY SSF116878 126 225 1.96E-47 T 20-04-2016 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 SUPERFAMILY SSF116878 392 467 1.96E-47 T 20-04-2016 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Gene3D G3DSA:1.20.120.430 397 467 2.3E-54 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Gene3D G3DSA:1.20.120.430 253 276 2.3E-54 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 Gene3D G3DSA:1.20.120.430 127 187 2.3E-54 T 20-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 224 244 3.8E-6 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS01375 94cafe851574b7a2e762364c3093824a 467 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 273 288 3.8E-6 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 SUPERFAMILY SSF54236 1 72 1.06E-27 T 20-04-2016 IPR029071 Ubiquitin-related domain APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 88 154 7.3E-13 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 Gene3D G3DSA:3.10.20.90 1 70 6.2E-38 T 20-04-2016 APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 Pfam PF00240 Ubiquitin family 3 72 1.6E-27 T 20-04-2016 IPR000626 Ubiquitin domain GO:0005515 APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 PANTHER PTHR10666 1 70 1.1E-67 T 20-04-2016 APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 SMART SM00213 1 72 1.7E-29 T 20-04-2016 IPR000626 Ubiquitin domain GO:0005515 APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 ProSitePatterns PS00299 Ubiquitin domain signature. 27 52 - T 20-04-2016 IPR019954 Ubiquitin conserved site APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 PRINTS PR00348 Ubiquitin signature 32 52 2.7E-27 T 20-04-2016 IPR019956 Ubiquitin APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 PRINTS PR00348 Ubiquitin signature 53 74 2.7E-27 T 20-04-2016 IPR019956 Ubiquitin APS56_RS10265 1b82f16708cfc11845fc94c9fa45ef47 154 PRINTS PR00348 Ubiquitin signature 11 31 2.7E-27 T 20-04-2016 IPR019956 Ubiquitin APS56_RS03145 cf8b311b49384fac493353aea5ca5db9 291 PIRSF PIRSF029038 1 291 6.7E-112 T 20-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 APS56_RS03145 cf8b311b49384fac493353aea5ca5db9 291 PANTHER PTHR13393:SF0 1 291 1.3E-106 T 20-04-2016 APS56_RS03145 cf8b311b49384fac493353aea5ca5db9 291 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 4 291 45.154 T 20-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 APS56_RS03145 cf8b311b49384fac493353aea5ca5db9 291 PANTHER PTHR13393 1 291 1.3E-106 T 20-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 APS56_RS03145 cf8b311b49384fac493353aea5ca5db9 291 SUPERFAMILY SSF53335 43 290 8.88E-21 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS03145 cf8b311b49384fac493353aea5ca5db9 291 Gene3D G3DSA:3.40.50.150 80 197 1.8E-15 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS03145 cf8b311b49384fac493353aea5ca5db9 291 Pfam PF05971 Protein of unknown function (DUF890) 2 291 1.9E-101 T 20-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 APS56_RS09510 1361d6756b83dc3e36fc8f4bd2bb018e 609 SUPERFAMILY SSF55729 334 542 4.13E-23 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS09510 1361d6756b83dc3e36fc8f4bd2bb018e 609 PANTHER PTHR37323 59 608 7.6E-67 T 20-04-2016 APS56_RS09510 1361d6756b83dc3e36fc8f4bd2bb018e 609 Pfam PF01553 Acyltransferase 77 206 4.0E-8 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS09510 1361d6756b83dc3e36fc8f4bd2bb018e 609 PANTHER PTHR37323:SF1 59 608 7.6E-67 T 20-04-2016 APS56_RS09510 1361d6756b83dc3e36fc8f4bd2bb018e 609 SUPERFAMILY SSF69593 53 265 2.48E-12 T 20-04-2016 APS56_RS09510 1361d6756b83dc3e36fc8f4bd2bb018e 609 SMART SM00563 87 209 1.2E-4 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS09510 1361d6756b83dc3e36fc8f4bd2bb018e 609 Pfam PF13444 Acetyltransferase (GNAT) domain 350 451 2.2E-22 T 20-04-2016 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 594 23.233 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 PANTHER PTHR11956 1 208 1.8E-154 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 PANTHER PTHR11956 226 594 1.8E-154 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 Gene3D G3DSA:3.30.1360.70 5 101 6.2E-10 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 Pfam PF00750 tRNA synthetases class I (R) 99 453 4.2E-45 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 SMART SM01016 5 86 6.4E-5 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 SUPERFAMILY SSF47323 471 594 2.68E-30 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 Pfam PF05746 DALR anticodon binding domain 477 594 2.1E-30 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 Gene3D G3DSA:1.10.730.10 471 594 2.8E-32 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 SUPERFAMILY SSF52374 112 469 4.97E-73 T 20-04-2016 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 154 167 6.9E-18 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 130 146 6.9E-18 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 319 340 6.9E-18 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 PRINTS PR01038 Arginyl-tRNA synthetase signature 115 130 6.9E-18 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 85 5.0E-6 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 4 594 2.7E-131 T 20-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 SMART SM00836 477 594 1.4E-38 T 20-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 PANTHER PTHR11956:SF6 1 208 1.8E-154 T 20-04-2016 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 PANTHER PTHR11956:SF6 226 594 1.8E-154 T 20-04-2016 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 Gene3D G3DSA:3.40.50.620 113 470 9.3E-91 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 123 134 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS14820 8ad824f0f7b2d400be48ac49ef9f854d 594 SUPERFAMILY SSF55190 8 99 1.96E-8 T 20-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APS56_RS07605 7e7cb67290f0862c74d0fff597046649 265 SMART SM00563 53 192 7.7E-16 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS07605 7e7cb67290f0862c74d0fff597046649 265 Gene3D G3DSA:3.40.1130.10 39 198 3.2E-5 T 20-04-2016 APS56_RS07605 7e7cb67290f0862c74d0fff597046649 265 SUPERFAMILY SSF69593 16 233 1.28E-13 T 20-04-2016 APS56_RS07605 7e7cb67290f0862c74d0fff597046649 265 Pfam PF01553 Acyltransferase 39 189 4.1E-10 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS06345 74c41813e9502ecaf8a28b2a003523ae 379 SUPERFAMILY SSF51556 44 346 2.45E-64 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS06345 74c41813e9502ecaf8a28b2a003523ae 379 Gene3D G3DSA:3.20.20.140 44 347 3.5E-77 T 20-04-2016 APS56_RS06345 74c41813e9502ecaf8a28b2a003523ae 379 PIRSF PIRSF038994 1 377 9.0E-85 T 20-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APS56_RS06345 74c41813e9502ecaf8a28b2a003523ae 379 PANTHER PTHR11113 11 379 1.3E-70 T 20-04-2016 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 SUPERFAMILY SSF103473 236 416 3.4E-24 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 Gene3D G3DSA:1.20.1250.20 393 587 5.0E-5 T 20-04-2016 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 Gene3D G3DSA:1.20.1250.20 60 204 7.5E-19 T 20-04-2016 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 SUPERFAMILY SSF103473 383 589 5.36E-8 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 11 215 3.2E-55 T 20-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 SUPERFAMILY SSF103473 16 209 3.4E-24 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 PANTHER PTHR11654 424 559 5.9E-116 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 PANTHER PTHR11654 307 357 5.9E-116 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 PANTHER PTHR11654 15 250 5.9E-116 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 20-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 PANTHER PTHR11654:SF119 424 559 5.9E-116 T 20-04-2016 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 PANTHER PTHR11654:SF119 307 357 5.9E-116 T 20-04-2016 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 PANTHER PTHR11654:SF119 15 250 5.9E-116 T 20-04-2016 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 Pfam PF00854 POT family 94 211 1.4E-29 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS08555 5945d97466cb47029e76caac566c7cd8 595 Pfam PF00854 POT family 419 558 4.6E-16 T 20-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APS56_RS01115 dd07f077893bdf7ae0d6f1241b0d135a 155 SUPERFAMILY SSF109854 8 155 1.34E-29 T 20-04-2016 APS56_RS01115 dd07f077893bdf7ae0d6f1241b0d135a 155 Pfam PF12867 DinB superfamily 11 138 2.8E-13 T 20-04-2016 IPR024775 DinB-like domain APS56_RS01115 dd07f077893bdf7ae0d6f1241b0d135a 155 Gene3D G3DSA:1.20.120.450 7 148 2.7E-18 T 20-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase APS56_RS09500 aa76eda6966a953d490d250aec547487 164 PANTHER PTHR10545 1 159 6.1E-57 T 20-04-2016 APS56_RS09500 aa76eda6966a953d490d250aec547487 164 SUPERFAMILY SSF55729 3 150 8.78E-35 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS09500 aa76eda6966a953d490d250aec547487 164 Gene3D G3DSA:3.40.630.30 1 154 1.8E-49 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS09500 aa76eda6966a953d490d250aec547487 164 Pfam PF00583 Acetyltransferase (GNAT) family 62 134 1.3E-14 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 Pfam PF00175 Oxidoreductase NAD-binding domain 119 225 2.9E-18 T 20-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 Gene3D G3DSA:3.10.20.30 238 349 1.5E-31 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 Gene3D G3DSA:2.40.30.10 2 94 3.0E-25 T 20-04-2016 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 SUPERFAMILY SSF63380 2 108 7.43E-23 T 20-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 PANTHER PTHR19370 4 243 1.7E-54 T 20-04-2016 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 SUPERFAMILY SSF54292 234 349 4.33E-27 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 267 341 5.7E-15 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 SUPERFAMILY SSF52343 94 241 2.1E-31 T 20-04-2016 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 Gene3D G3DSA:3.40.50.80 95 237 9.5E-35 T 20-04-2016 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 Pfam PF00970 Oxidoreductase FAD-binding domain 11 104 1.2E-13 T 20-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 PRINTS PR00406 Cytochrome B5 reductase signature 91 105 3.1E-7 T 20-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 PRINTS PR00406 Cytochrome B5 reductase signature 211 219 3.1E-7 T 20-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 PRINTS PR00406 Cytochrome B5 reductase signature 116 135 3.1E-7 T 20-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APS56_RS10700 b245aff22a86282a17398be5e8c1c8aa 352 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 298 306 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APS56_RS14600 26ebd24f17f64a70fd4f6915f2db82f4 411 Pfam PF04773 FecR protein 196 285 2.9E-16 T 20-04-2016 IPR006860 FecR protein APS56_RS14600 26ebd24f17f64a70fd4f6915f2db82f4 411 Pfam PF16344 Domain of unknown function (DUF4974) 297 396 3.6E-21 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS14600 26ebd24f17f64a70fd4f6915f2db82f4 411 PANTHER PTHR30273 1 127 7.6E-61 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS14600 26ebd24f17f64a70fd4f6915f2db82f4 411 PANTHER PTHR30273 192 410 7.6E-61 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS14600 26ebd24f17f64a70fd4f6915f2db82f4 411 PANTHER PTHR30273:SF2 1 127 7.6E-61 T 20-04-2016 APS56_RS14600 26ebd24f17f64a70fd4f6915f2db82f4 411 PANTHER PTHR30273:SF2 192 410 7.6E-61 T 20-04-2016 APS56_RS13715 765128c2519f0feff79f5799307621be 801 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 617 681 2.8E-18 T 20-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 APS56_RS13715 765128c2519f0feff79f5799307621be 801 SUPERFAMILY SSF49863 616 709 1.96E-20 T 20-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 APS56_RS13715 765128c2519f0feff79f5799307621be 801 PANTHER PTHR38481:SF1 25 740 2.0E-82 T 20-04-2016 APS56_RS13715 765128c2519f0feff79f5799307621be 801 Gene3D G3DSA:1.50.10.100 54 363 5.4E-52 T 20-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 APS56_RS13715 765128c2519f0feff79f5799307621be 801 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 54 308 4.8E-34 T 20-04-2016 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical APS56_RS13715 765128c2519f0feff79f5799307621be 801 Gene3D G3DSA:2.70.98.10 364 607 1.5E-71 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS13715 765128c2519f0feff79f5799307621be 801 Gene3D G3DSA:2.60.220.10 608 710 7.7E-24 T 20-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 APS56_RS13715 765128c2519f0feff79f5799307621be 801 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 731 800 3.2E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS13715 765128c2519f0feff79f5799307621be 801 SUPERFAMILY SSF74650 350 608 1.31E-61 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS13715 765128c2519f0feff79f5799307621be 801 PANTHER PTHR38481 25 740 2.0E-82 T 20-04-2016 APS56_RS13715 765128c2519f0feff79f5799307621be 801 SUPERFAMILY SSF48230 34 358 3.11E-46 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS13715 765128c2519f0feff79f5799307621be 801 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 350 602 1.0E-70 T 20-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 Pfam PF10410 DnaB-helicase binding domain of primase 380 421 2.2E-6 T 20-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 Gene3D G3DSA:3.90.980.10 113 240 1.7E-36 T 20-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APS56_RS13415 858ce146d7e2878b52f790093e950535 652 SMART SM00493 259 330 4.0E-14 T 20-04-2016 IPR006171 Toprim domain APS56_RS13415 858ce146d7e2878b52f790093e950535 652 Hamap MF_00974 DNA primase [dnaG]. 1 642 24.694 T 20-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 SMART SM00400 33 87 4.5E-15 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 PIRSF PIRSF002811 1 641 2.1E-139 T 20-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 SUPERFAMILY SSF57783 2 98 2.38E-26 T 20-04-2016 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 TIGRFAM TIGR01391 dnaG: DNA primase 2 414 1.1E-126 T 20-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 Pfam PF08275 DNA primase catalytic core, N-terminal domain 123 252 7.1E-37 T 20-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APS56_RS13415 858ce146d7e2878b52f790093e950535 652 Pfam PF13662 Toprim domain 262 335 1.4E-16 T 20-04-2016 IPR006171 Toprim domain APS56_RS13415 858ce146d7e2878b52f790093e950535 652 PANTHER PTHR30313 1 647 2.9E-121 T 20-04-2016 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 SUPERFAMILY SSF56731 113 422 6.28E-89 T 20-04-2016 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 Gene3D G3DSA:3.90.580.10 2 98 1.5E-29 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 Pfam PF01807 CHC2 zinc finger 3 97 3.1E-25 T 20-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APS56_RS13415 858ce146d7e2878b52f790093e950535 652 Gene3D G3DSA:3.40.1360.10 241 361 8.5E-43 T 20-04-2016 APS56_RS07425 3eb3e1cdcc7feb6f5a8cdefe4b4092d9 389 Gene3D G3DSA:3.40.640.10 7 255 6.2E-83 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS07425 3eb3e1cdcc7feb6f5a8cdefe4b4092d9 389 PANTHER PTHR11808 6 389 7.1E-156 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APS56_RS07425 3eb3e1cdcc7feb6f5a8cdefe4b4092d9 389 SUPERFAMILY SSF53383 21 389 1.48E-110 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS07425 3eb3e1cdcc7feb6f5a8cdefe4b4092d9 389 PANTHER PTHR11808:SF36 6 389 7.1E-156 T 20-04-2016 APS56_RS07425 3eb3e1cdcc7feb6f5a8cdefe4b4092d9 389 Gene3D G3DSA:3.90.1150.10 256 389 2.4E-50 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS07425 3eb3e1cdcc7feb6f5a8cdefe4b4092d9 389 PIRSF PIRSF001434 1 389 2.1E-126 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APS56_RS07425 3eb3e1cdcc7feb6f5a8cdefe4b4092d9 389 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 388 3.5E-133 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 19 282 3.2E-62 T 20-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 PANTHER PTHR18895 1 283 4.0E-70 T 20-04-2016 APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 Pfam PF05175 Methyltransferase small domain 109 197 3.1E-20 T 20-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 277 1.7E-73 T 20-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 SUPERFAMILY SSF53335 1 266 8.74E-50 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 Gene3D G3DSA:1.10.8.10 28 85 1.8E-8 T 20-04-2016 APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 PANTHER PTHR18895:SF64 1 283 4.0E-70 T 20-04-2016 APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 184 190 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APS56_RS16335 968f7352f18284f69e2949da14ba8525 283 Gene3D G3DSA:3.40.50.150 89 281 4.0E-59 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS07115 3d3e4705b48fa7dec120b95ddb003e99 210 Gene3D G3DSA:3.40.50.150 2 208 7.3E-23 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS07115 3d3e4705b48fa7dec120b95ddb003e99 210 SUPERFAMILY SSF53335 3 194 5.14E-32 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS07115 3d3e4705b48fa7dec120b95ddb003e99 210 PANTHER PTHR10108:SF860 3 207 4.7E-47 T 20-04-2016 APS56_RS07115 3d3e4705b48fa7dec120b95ddb003e99 210 Pfam PF08241 Methyltransferase domain 42 134 9.5E-11 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APS56_RS07115 3d3e4705b48fa7dec120b95ddb003e99 210 PANTHER PTHR10108 3 207 4.7E-47 T 20-04-2016 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SMART SM00060 523 624 11.0 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SMART SM00060 29 129 0.036 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SMART SM00060 1183 1261 66.0 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SMART SM00060 261 376 87.0 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SMART SM00060 401 504 2.3 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SMART SM00060 149 250 0.0059 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 3802 3877 2.6E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SUPERFAMILY SSF49265 100 181 4.55E-6 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SUPERFAMILY SSF49265 217 241 4.55E-6 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 Pfam PF07705 CARDB 1877 1984 8.5E-8 T 20-04-2016 IPR011635 CARDB domain APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 Pfam PF07705 CARDB 1744 1854 1.8E-10 T 20-04-2016 IPR011635 CARDB domain APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 Pfam PF07705 CARDB 2121 2229 1.8E-5 T 20-04-2016 IPR011635 CARDB domain APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 Pfam PF07705 CARDB 1997 2108 8.2E-9 T 20-04-2016 IPR011635 CARDB domain APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 Pfam PF07705 CARDB 1272 1370 5.6E-5 T 20-04-2016 IPR011635 CARDB domain APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 Pfam PF07705 CARDB 1603 1730 1.8E-7 T 20-04-2016 IPR011635 CARDB domain APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 SUPERFAMILY SSF49265 1196 1260 2.6E-5 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS00005 7cf6cea7002b71bd929693553066ced5 3879 Pfam PF13573 SprB repeat 3502 3534 1.5E-6 T 20-04-2016 IPR025667 SprB repeat APS56_RS12360 906775477dbdc3ec7a4b620004e81a16 326 Pfam PF04443 Acyl-protein synthetase, LuxE 16 324 6.7E-16 T 20-04-2016 IPR007534 Acyl-protein synthetase, LuxE GO:0008218|GO:0047474 MetaCyc: PWY-7723|UniPathway: UPA00569 APS56_RS12360 906775477dbdc3ec7a4b620004e81a16 326 SUPERFAMILY SSF56801 77 315 8.96E-6 T 20-04-2016 APS56_RS04765 0807ba920c185fa56e1cd06123a857e5 1239 Gene3D G3DSA:3.40.50.300 222 275 1.6E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04765 0807ba920c185fa56e1cd06123a857e5 1239 SUPERFAMILY SSF52540 184 362 1.46E-14 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04765 0807ba920c185fa56e1cd06123a857e5 1239 Gene3D G3DSA:3.40.50.300 286 315 4.2E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04765 0807ba920c185fa56e1cd06123a857e5 1239 Gene3D G3DSA:3.40.50.300 196 221 4.2E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 SUPERFAMILY SSF117281 47 320 9.94E-55 T 20-04-2016 APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 Gene3D G3DSA:2.130.10.80 30 324 6.2E-58 T 20-04-2016 IPR015916 Galactose oxidase, beta-propeller APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 SMART SM00612 89 142 6.2 T 20-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 SMART SM00612 193 247 1.2E-7 T 20-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 SMART SM00612 248 296 0.14 T 20-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 SMART SM00612 143 192 0.11 T 20-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 PANTHER PTHR24412 104 322 3.5E-45 T 20-04-2016 APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 Pfam PF01344 Kelch motif 131 176 1.4E-5 T 20-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 Pfam PF01344 Kelch motif 182 231 9.8E-7 T 20-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APS56_RS08845 1d65ae6e4628392ff449c52b4be0b994 426 Pfam PF01344 Kelch motif 236 283 2.9E-8 T 20-04-2016 IPR006652 Kelch repeat type 1 GO:0005515 APS56_RS16315 b097c74d26313b5371fe8c22205da01b 202 Gene3D G3DSA:3.30.230.30 16 135 4.4E-41 T 20-04-2016 IPR001498 Impact, N-terminal APS56_RS16315 b097c74d26313b5371fe8c22205da01b 202 SUPERFAMILY SSF54211 16 134 1.63E-38 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS16315 b097c74d26313b5371fe8c22205da01b 202 Pfam PF01205 Uncharacterized protein family UPF0029 22 127 6.3E-28 T 20-04-2016 IPR001498 Impact, N-terminal APS56_RS16315 b097c74d26313b5371fe8c22205da01b 202 PANTHER PTHR16301 19 185 9.6E-47 T 20-04-2016 IPR023582 Impact family APS56_RS11490 2b18e94154138b83f02f79626fd7b52e 396 Pfam PF07394 Protein of unknown function (DUF1501) 36 384 5.9E-26 T 20-04-2016 IPR010869 Protein of unknown function DUF1501 APS56_RS11490 2b18e94154138b83f02f79626fd7b52e 396 PANTHER PTHR15535 224 336 1.1E-12 T 20-04-2016 APS56_RS11490 2b18e94154138b83f02f79626fd7b52e 396 PANTHER PTHR15535:SF21 224 336 1.1E-12 T 20-04-2016 APS56_RS12135 12c02a67e456a1d8d4a67714305dfacb 734 Pfam PF01734 Patatin-like phospholipase 21 210 2.4E-27 T 20-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APS56_RS12135 12c02a67e456a1d8d4a67714305dfacb 734 PANTHER PTHR14226:SF37 12 441 5.7E-71 T 20-04-2016 APS56_RS12135 12c02a67e456a1d8d4a67714305dfacb 734 Gene3D G3DSA:3.40.1090.10 21 207 9.2E-15 T 20-04-2016 APS56_RS12135 12c02a67e456a1d8d4a67714305dfacb 734 SUPERFAMILY SSF52151 116 305 1.07E-55 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APS56_RS12135 12c02a67e456a1d8d4a67714305dfacb 734 SUPERFAMILY SSF52151 17 88 1.07E-55 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APS56_RS12135 12c02a67e456a1d8d4a67714305dfacb 734 PANTHER PTHR14226 12 441 5.7E-71 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.0E-28 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00097 Anthranilate synthase component II signature 121 133 1.0E-28 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.0E-28 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.0E-28 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00097 Anthranilate synthase component II signature 4 18 1.0E-28 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.0E-28 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 Gene3D G3DSA:3.40.50.880 2 187 6.8E-58 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.8E-12 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.8E-12 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 1.8E-12 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PANTHER PTHR11922 1 187 1.4E-71 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 3.5E-55 T 20-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 PANTHER PTHR11922:SF7 1 187 1.4E-71 T 20-04-2016 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 Pfam PF00117 Glutamine amidotransferase class-I 5 185 3.5E-45 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APS56_RS14955 d84baf26edda7f4d5ef052d1c43148dc 188 SUPERFAMILY SSF52317 1 187 2.52E-49 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS04040 a84be39c9bf5a89976b8ebda7547c0cf 376 Gene3D G3DSA:3.20.20.105 1 373 8.6E-149 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS04040 a84be39c9bf5a89976b8ebda7547c0cf 376 PANTHER PTHR21148:SF26 1 375 4.6E-143 T 20-04-2016 APS56_RS04040 a84be39c9bf5a89976b8ebda7547c0cf 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 130 366 1.3E-79 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS04040 a84be39c9bf5a89976b8ebda7547c0cf 376 PANTHER PTHR21148 1 375 4.6E-143 T 20-04-2016 APS56_RS04040 a84be39c9bf5a89976b8ebda7547c0cf 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 374 2.3E-140 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS04040 a84be39c9bf5a89976b8ebda7547c0cf 376 SUPERFAMILY SSF51713 1 371 2.22E-143 T 20-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS04040 a84be39c9bf5a89976b8ebda7547c0cf 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 366 50.372 T 20-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS04040 a84be39c9bf5a89976b8ebda7547c0cf 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 374 3.4E-144 T 20-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 Pfam PF02096 60Kd inner membrane protein 383 586 9.6E-52 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 594 13.738 T 20-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 Pfam PF14849 YidC periplasmic domain 104 370 1.4E-25 T 20-04-2016 IPR028053 Membrane insertase YidC, N-terminal APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 9 373 2.5E-24 T 20-04-2016 IPR028053 Membrane insertase YidC, N-terminal APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 PANTHER PTHR12428:SF14 350 635 1.2E-52 T 20-04-2016 APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 PANTHER PTHR12428 350 635 1.2E-52 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 PRINTS PR00701 60kDa inner membrane protein signature 107 128 5.2E-9 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 PRINTS PR00701 60kDa inner membrane protein signature 272 287 5.2E-9 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 PRINTS PR00701 60kDa inner membrane protein signature 444 467 5.2E-9 T 20-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APS56_RS04395 75cc1a0b0c9d241394f3b44dbe7e7b1f 635 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 382 585 1.5E-54 T 20-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APS56_RS13590 89ef25b8ee1c41241c4753a34738e41c 105 SUPERFAMILY SSF52821 20 90 1.05E-16 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS13590 89ef25b8ee1c41241c4753a34738e41c 105 Pfam PF00581 Rhodanese-like domain 20 82 2.2E-9 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS13590 89ef25b8ee1c41241c4753a34738e41c 105 SMART SM00450 7 103 2.3E-8 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS13590 89ef25b8ee1c41241c4753a34738e41c 105 Gene3D G3DSA:3.40.250.10 18 95 6.5E-17 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS12575 77806889f56d7ec089bc0464fd2a7dcb 345 Gene3D G3DSA:3.30.565.10 207 312 7.7E-6 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12575 77806889f56d7ec089bc0464fd2a7dcb 345 SUPERFAMILY SSF55874 220 315 2.22E-6 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12575 77806889f56d7ec089bc0464fd2a7dcb 345 PANTHER PTHR34220:SF1 1 343 1.8E-66 T 20-04-2016 APS56_RS12575 77806889f56d7ec089bc0464fd2a7dcb 345 PANTHER PTHR34220 1 343 1.8E-66 T 20-04-2016 APS56_RS12575 77806889f56d7ec089bc0464fd2a7dcb 345 Pfam PF06580 Histidine kinase 158 235 7.3E-25 T 20-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APS56_RS06980 4e31dae945d24aede788e213b8cc7b57 360 SUPERFAMILY SSF47413 2 66 5.36E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS06980 4e31dae945d24aede788e213b8cc7b57 360 Pfam PF06114 Domain of unknown function (DUF955) 158 279 4.0E-12 T 20-04-2016 IPR010359 HTH domain, IrrE-type APS56_RS06980 4e31dae945d24aede788e213b8cc7b57 360 Gene3D G3DSA:1.10.260.40 3 82 3.1E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS06980 4e31dae945d24aede788e213b8cc7b57 360 PANTHER PTHR10245:SF22 1 280 6.3E-18 T 20-04-2016 APS56_RS06980 4e31dae945d24aede788e213b8cc7b57 360 PANTHER PTHR10245 1 280 6.3E-18 T 20-04-2016 APS56_RS06980 4e31dae945d24aede788e213b8cc7b57 360 Pfam PF01381 Helix-turn-helix 9 59 4.7E-12 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS06980 4e31dae945d24aede788e213b8cc7b57 360 SMART SM00530 7 62 4.6E-12 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS15815 fa497b1aa0125cb31a373fed5004e7e6 280 Pfam PF01063 Amino-transferase class IV 28 255 1.5E-47 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APS56_RS15815 fa497b1aa0125cb31a373fed5004e7e6 280 Gene3D G3DSA:3.20.10.10 140 273 3.5E-31 T 20-04-2016 APS56_RS15815 fa497b1aa0125cb31a373fed5004e7e6 280 PANTHER PTHR11825:SF55 1 265 4.3E-38 T 20-04-2016 APS56_RS15815 fa497b1aa0125cb31a373fed5004e7e6 280 Gene3D G3DSA:3.30.470.10 1 115 8.0E-25 T 20-04-2016 APS56_RS15815 fa497b1aa0125cb31a373fed5004e7e6 280 PANTHER PTHR11825 1 265 4.3E-38 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APS56_RS15815 fa497b1aa0125cb31a373fed5004e7e6 280 SUPERFAMILY SSF56752 2 273 4.45E-49 T 20-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.5E-46 T 20-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 Gene3D G3DSA:3.30.1490.20 130 201 2.8E-29 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 PANTHER PTHR18866 1 441 3.3E-296 T 20-04-2016 APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 Pfam PF02785 Biotin carboxylase C-terminal domain 334 440 2.5E-44 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 8.3E-72 T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 Gene3D G3DSA:3.40.50.20 1 129 1.1E-53 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 SUPERFAMILY SSF51246 331 442 3.45E-46 T 20-04-2016 IPR011054 Rudiment single hybrid motif APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 442 1.5E-213 T 20-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 SUPERFAMILY SSF56059 83 347 1.52E-64 T 20-04-2016 APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 20-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 SMART SM00878 334 440 3.1E-71 T 20-04-2016 IPR005482 Biotin carboxylase, C-terminal APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 SUPERFAMILY SSF52440 1 113 5.53E-49 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS11195 69e2387a7493b2193bf38520d10d8256 450 Gene3D G3DSA:3.30.470.20 203 441 4.1E-98 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS08725 525e38730abd630aa37b13cc904958cc 189 SUPERFAMILY SSF49329 45 187 3.8E-40 T 20-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS08725 525e38730abd630aa37b13cc904958cc 189 Gene3D G3DSA:2.60.40.200 48 187 3.4E-41 T 20-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS08725 525e38730abd630aa37b13cc904958cc 189 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 52 187 9.1E-38 T 20-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APS56_RS08725 525e38730abd630aa37b13cc904958cc 189 PANTHER PTHR10003 34 188 3.8E-24 T 20-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 APS56_RS08725 525e38730abd630aa37b13cc904958cc 189 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 176 187 - T 20-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 Gene3D G3DSA:3.90.25.10 183 312 2.3E-32 T 20-04-2016 APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 PRINTS PR01713 Nucleotide sugar epimerase signature 219 234 4.0E-6 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 PRINTS PR01713 Nucleotide sugar epimerase signature 289 306 4.0E-6 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 PRINTS PR01713 Nucleotide sugar epimerase signature 244 259 4.0E-6 T 20-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 250 1.3E-54 T 20-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 Gene3D G3DSA:3.40.50.720 3 182 1.3E-55 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 SUPERFAMILY SSF51735 3 327 2.8E-90 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 PANTHER PTHR10366 9 323 2.5E-107 T 20-04-2016 APS56_RS02120 81f98da0bd376de0828cf3d9c1bdfc7a 329 PANTHER PTHR10366:SF472 9 323 2.5E-107 T 20-04-2016 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 10 254 29.888 T 20-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 242 6.1E-70 T 20-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 Pfam PF00290 Tryptophan synthase alpha chain 6 247 2.2E-77 T 20-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 44 57 - T 20-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 PANTHER PTHR10314 20 47 3.2E-25 T 20-04-2016 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 PANTHER PTHR10314 70 166 3.2E-25 T 20-04-2016 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 SUPERFAMILY SSF51366 1 250 5.93E-81 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 Gene3D G3DSA:3.20.20.70 1 251 8.8E-89 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 PANTHER PTHR10314:SF4 20 47 3.2E-25 T 20-04-2016 APS56_RS14930 0d32b0f051f08be041439195202f1be8 254 PANTHER PTHR10314:SF4 70 166 3.2E-25 T 20-04-2016 APS56_RS01495 8d87c2939c40419c93d6366a4cdcb55d 592 PANTHER PTHR30097 27 413 1.3E-75 T 20-04-2016 APS56_RS01495 8d87c2939c40419c93d6366a4cdcb55d 592 Pfam PF11827 Protein of unknown function (DUF3347) 393 588 9.2E-59 T 20-04-2016 IPR021782 Protein of unknown function DUF3347 APS56_RS01495 8d87c2939c40419c93d6366a4cdcb55d 592 SUPERFAMILY SSF111369 132 322 3.79E-21 T 20-04-2016 APS56_RS01495 8d87c2939c40419c93d6366a4cdcb55d 592 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 207 394 2.5E-39 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APS56_RS01495 8d87c2939c40419c93d6366a4cdcb55d 592 Gene3D G3DSA:2.40.50.100 129 156 3.2E-10 T 20-04-2016 APS56_RS01495 8d87c2939c40419c93d6366a4cdcb55d 592 Gene3D G3DSA:2.40.50.100 204 242 3.2E-10 T 20-04-2016 APS56_RS01495 8d87c2939c40419c93d6366a4cdcb55d 592 PANTHER PTHR30097:SF3 27 413 1.3E-75 T 20-04-2016 APS56_RS01495 8d87c2939c40419c93d6366a4cdcb55d 592 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 109 317 5.4E-70 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APS56_RS11035 9f044d8e961ef980e2b69a20e7b0a038 306 Pfam PF01145 SPFH domain / Band 7 family 22 189 2.5E-26 T 20-04-2016 IPR001107 Band 7 domain APS56_RS11035 9f044d8e961ef980e2b69a20e7b0a038 306 PANTHER PTHR10264:SF84 1 298 9.6E-109 T 20-04-2016 APS56_RS11035 9f044d8e961ef980e2b69a20e7b0a038 306 PANTHER PTHR10264 1 298 9.6E-109 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APS56_RS11035 9f044d8e961ef980e2b69a20e7b0a038 306 SUPERFAMILY SSF117892 49 183 1.15E-23 T 20-04-2016 IPR001107 Band 7 domain APS56_RS11035 9f044d8e961ef980e2b69a20e7b0a038 306 SMART SM00244 18 177 9.5E-30 T 20-04-2016 IPR001107 Band 7 domain APS56_RS16535 030d8dded6998b7211aa2a37c7379d3a 258 SUPERFAMILY SSF53098 6 177 5.79E-50 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS16535 030d8dded6998b7211aa2a37c7379d3a 258 PANTHER PTHR30231 1 257 1.6E-126 T 20-04-2016 APS56_RS16535 030d8dded6998b7211aa2a37c7379d3a 258 Gene3D G3DSA:3.30.420.10 7 174 2.3E-38 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS16535 030d8dded6998b7211aa2a37c7379d3a 258 SMART SM00479 8 174 6.6E-27 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APS56_RS16535 030d8dded6998b7211aa2a37c7379d3a 258 Pfam PF00929 Exonuclease 11 165 1.5E-19 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APS56_RS16535 030d8dded6998b7211aa2a37c7379d3a 258 PANTHER PTHR30231:SF9 1 257 1.6E-126 T 20-04-2016 APS56_RS13155 64501c5f28b90abeb716be6b18973039 254 PANTHER PTHR10992 3 253 6.9E-65 T 20-04-2016 APS56_RS13155 64501c5f28b90abeb716be6b18973039 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 81 94 2.1E-5 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS13155 64501c5f28b90abeb716be6b18973039 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 38 53 2.1E-5 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS13155 64501c5f28b90abeb716be6b18973039 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 2.1E-5 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS13155 64501c5f28b90abeb716be6b18973039 254 Gene3D G3DSA:3.40.50.1820 7 253 9.2E-45 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS13155 64501c5f28b90abeb716be6b18973039 254 SUPERFAMILY SSF53474 4 253 9.25E-46 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS13155 64501c5f28b90abeb716be6b18973039 254 PANTHER PTHR10992:SF768 3 253 6.9E-65 T 20-04-2016 APS56_RS13155 64501c5f28b90abeb716be6b18973039 254 Pfam PF00561 alpha/beta hydrolase fold 13 110 5.2E-21 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS12475 20e810f49cefe83b024c1a5142239a35 198 SMART SM00900 99 186 6.0E-23 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APS56_RS12475 20e810f49cefe83b024c1a5142239a35 198 Pfam PF04205 FMN-binding domain 99 181 3.2E-20 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APS56_RS12475 20e810f49cefe83b024c1a5142239a35 198 PANTHER PTHR36118 4 195 3.1E-37 T 20-04-2016 APS56_RS12475 20e810f49cefe83b024c1a5142239a35 198 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 5 188 22.065 T 20-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APS56_RS12475 20e810f49cefe83b024c1a5142239a35 198 PIRSF PIRSF006091 1 197 5.3E-42 T 20-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APS56_RS12475 20e810f49cefe83b024c1a5142239a35 198 PANTHER PTHR36118:SF1 4 195 3.1E-37 T 20-04-2016 APS56_RS12475 20e810f49cefe83b024c1a5142239a35 198 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 13 186 2.7E-44 T 20-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 Gene3D G3DSA:3.40.50.1770 30 199 8.6E-50 T 20-04-2016 APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 Gene3D G3DSA:3.40.50.720 200 329 3.2E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 SUPERFAMILY SSF52283 30 165 1.36E-42 T 20-04-2016 APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 SUPERFAMILY SSF52283 332 388 1.36E-42 T 20-04-2016 APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 170 380 1.7E-58 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 SUPERFAMILY SSF51735 165 329 3.27E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 PANTHER PTHR10160 28 394 2.8E-98 T 20-04-2016 APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 32 165 1.7E-37 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 SMART SM01002 177 324 1.2E-57 T 20-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 201 226 - T 20-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APS56_RS02065 ed79dd051b2fe0b050212da63db01c00 399 SMART SM01003 32 165 2.9E-49 T 20-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 PANTHER PTHR33695:SF1 5 158 6.6E-30 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 4.1E-12 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 138 154 4.1E-12 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 4.1E-12 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 Pfam PF01252 Signal peptidase (SPase) II 13 156 2.0E-28 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 TIGRFAM TIGR00077 lspA: signal peptidase II 3 164 1.7E-28 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 PANTHER PTHR33695 5 158 6.6E-30 T 20-04-2016 APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS08890 4f2d72adf1586c816abc1bfe8a417eb5 165 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 5 163 14.258 T 20-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 PANTHER PTHR11070:SF7 538 652 8.9E-199 T 20-04-2016 APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 Gene3D G3DSA:3.40.50.300 561 652 2.6E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 Gene3D G3DSA:3.40.50.300 291 393 2.6E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 Gene3D G3DSA:1.10.10.160 112 195 3.6E-19 T 20-04-2016 IPR013986 DExx box DNA helicase domain APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 PANTHER PTHR11070:SF7 2 522 8.9E-199 T 20-04-2016 APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 PANTHER PTHR11070 538 652 8.9E-199 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 Gene3D G3DSA:1.10.486.10 394 549 3.0E-43 T 20-04-2016 APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 Pfam PF13361 UvrD-like helicase C-terminal domain 283 624 2.7E-73 T 20-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 SUPERFAMILY SSF52540 2 651 6.14E-171 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 277 9.6E-73 T 20-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 Gene3D G3DSA:3.40.50.300 196 290 3.0E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 Gene3D G3DSA:3.40.50.300 2 108 3.0E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00115 bb31cb07cfd29480096a308359b1e33a 784 PANTHER PTHR11070 2 522 8.9E-199 T 20-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APS56_RS02860 db396b6a97cf6e789ce66ad7708fd0aa 410 Pfam PF00005 ABC transporter 198 351 3.7E-24 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS02860 db396b6a97cf6e789ce66ad7708fd0aa 410 SMART SM00382 207 401 8.9E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS02860 db396b6a97cf6e789ce66ad7708fd0aa 410 SUPERFAMILY SSF52540 69 151 6.43E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02860 db396b6a97cf6e789ce66ad7708fd0aa 410 SUPERFAMILY SSF52540 176 384 1.81E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02860 db396b6a97cf6e789ce66ad7708fd0aa 410 Gene3D G3DSA:3.40.50.300 179 384 3.0E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02860 db396b6a97cf6e789ce66ad7708fd0aa 410 PANTHER PTHR24220 184 382 2.6E-44 T 20-04-2016 APS56_RS02860 db396b6a97cf6e789ce66ad7708fd0aa 410 Gene3D G3DSA:3.40.50.300 66 152 2.2E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01680 725b6645a26cecdea0f1b8f8195765e2 164 Gene3D G3DSA:3.40.33.10 40 128 6.5E-7 T 20-04-2016 IPR014044 CAP domain APS56_RS01680 725b6645a26cecdea0f1b8f8195765e2 164 PANTHER PTHR31157 44 162 9.6E-15 T 20-04-2016 APS56_RS01680 725b6645a26cecdea0f1b8f8195765e2 164 Pfam PF00188 Cysteine-rich secretory protein family 49 141 1.6E-7 T 20-04-2016 IPR014044 CAP domain APS56_RS01680 725b6645a26cecdea0f1b8f8195765e2 164 SUPERFAMILY SSF55797 42 142 3.4E-12 T 20-04-2016 IPR014044 CAP domain APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 679 745 5.4E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 399 443 6.0E-21 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 591 636 3.2E-20 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 446 491 6.2E-24 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 61 107 2.4E-23 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 13 59 2.3E-20 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 205 251 1.5E-20 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 109 155 9.8E-22 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 301 347 2.0E-22 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 494 539 2.4E-23 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 542 587 6.2E-24 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 157 203 3.5E-22 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 253 299 4.0E-22 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS10970 c4dad3e568ba08066825b0c8f4dc54f9 745 TIGRFAM TIGR04534 ELWxxDGT_rpt: ELWxxDGT repeat 349 394 4.8E-22 T 20-04-2016 IPR030916 ELWxxDGT repeat APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 SUPERFAMILY SSF53187 5 174 1.31E-50 T 20-04-2016 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 SUPERFAMILY SSF53187 305 380 1.31E-50 T 20-04-2016 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 PANTHER PTHR11014 1 379 3.3E-70 T 20-04-2016 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 SUPERFAMILY SSF55031 178 279 2.97E-15 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 5 379 2.5E-110 T 20-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 100 137 - T 20-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 Pfam PF01546 Peptidase family M20/M25/M40 65 380 1.7E-35 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 Gene3D G3DSA:3.40.630.10 5 184 1.7E-55 T 20-04-2016 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 Gene3D G3DSA:3.40.630.10 324 381 1.7E-55 T 20-04-2016 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 Gene3D G3DSA:3.30.70.360 185 280 2.2E-18 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 PANTHER PTHR11014:SF80 1 379 3.3E-70 T 20-04-2016 APS56_RS06495 7c356aaf9779eeb1cd2f1469a91711e1 386 Pfam PF07687 Peptidase dimerisation domain 171 280 6.6E-15 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS03620 a13ea9d5f4c84e6604e0e5d14780f9cc 259 PANTHER PTHR14226:SF37 2 248 2.6E-53 T 20-04-2016 APS56_RS03620 a13ea9d5f4c84e6604e0e5d14780f9cc 259 PANTHER PTHR14226 2 248 2.6E-53 T 20-04-2016 APS56_RS03620 a13ea9d5f4c84e6604e0e5d14780f9cc 259 Gene3D G3DSA:3.40.1090.10 5 159 1.3E-15 T 20-04-2016 APS56_RS03620 a13ea9d5f4c84e6604e0e5d14780f9cc 259 SUPERFAMILY SSF52151 1 246 4.88E-54 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APS56_RS03620 a13ea9d5f4c84e6604e0e5d14780f9cc 259 Pfam PF01734 Patatin-like phospholipase 5 161 6.4E-32 T 20-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 Pfam PF03572 Peptidase family S41 368 547 4.4E-47 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 SUPERFAMILY SSF50156 249 333 8.8E-10 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 SUPERFAMILY SSF52096 361 552 2.15E-62 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 SUPERFAMILY SSF52096 206 276 2.15E-62 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 554 698 1.7E-32 T 20-04-2016 IPR020992 Tail specific protease, C-terminal APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 Gene3D G3DSA:2.30.42.10 258 346 6.4E-15 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 253 333 1.8E-8 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 SMART SM00228 258 336 3.6E-9 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 PANTHER PTHR32060:SF11 30 620 6.5E-142 T 20-04-2016 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 220 568 1.8E-87 T 20-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 Gene3D G3DSA:3.90.226.10 347 550 2.2E-55 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 Gene3D G3DSA:3.90.226.10 676 699 2.2E-55 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 SMART SM00245 337 548 1.1E-50 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS08520 376384593dd782c6324f1c6c77d9f78c 711 PANTHER PTHR32060 30 620 6.5E-142 T 20-04-2016 APS56_RS02825 20f97ebc3a8505c86f3efcb0ccb2e169 1218 SUPERFAMILY SSF56300 64 238 4.25E-38 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS02825 20f97ebc3a8505c86f3efcb0ccb2e169 1218 SUPERFAMILY SSF56300 275 345 4.25E-38 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS02825 20f97ebc3a8505c86f3efcb0ccb2e169 1218 Pfam PF00149 Calcineurin-like phosphoesterase 60 291 2.9E-10 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS02825 20f97ebc3a8505c86f3efcb0ccb2e169 1218 Gene3D G3DSA:3.60.21.10 38 238 1.6E-42 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS02825 20f97ebc3a8505c86f3efcb0ccb2e169 1218 Gene3D G3DSA:3.60.21.10 275 361 1.6E-42 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS06965 c9ab3fa4bb6602cfeea4c57c45afe70e 94 Gene3D G3DSA:1.10.10.10 37 83 4.7E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06965 c9ab3fa4bb6602cfeea4c57c45afe70e 94 Pfam PF12728 Helix-turn-helix domain 37 86 6.6E-8 T 20-04-2016 APS56_RS06965 c9ab3fa4bb6602cfeea4c57c45afe70e 94 SUPERFAMILY SSF46955 36 87 2.01E-7 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 Pfam PF03471 Transporter associated domain 349 425 1.2E-16 T 20-04-2016 IPR005170 Transporter-associated domain APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 Pfam PF01595 Domain of unknown function DUF21 7 194 4.9E-29 T 20-04-2016 IPR002550 Domain of unknown function DUF21 APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 Gene3D G3DSA:3.10.580.10 206 327 3.9E-11 T 20-04-2016 APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 Gene3D G3DSA:3.30.465.10 328 425 2.0E-22 T 20-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 PANTHER PTHR22777 1 429 4.5E-90 T 20-04-2016 APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 SUPERFAMILY SSF54631 207 336 7.2E-23 T 20-04-2016 APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 Pfam PF00571 CBS domain 285 332 0.0068 T 20-04-2016 IPR000644 CBS domain APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 SUPERFAMILY SSF56176 348 425 2.37E-16 T 20-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APS56_RS08585 df9049b8b57eef4a488e6a1877919396 429 SMART SM01091 348 427 3.1E-19 T 20-04-2016 IPR005170 Transporter-associated domain APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PANTHER PTHR11537 8 242 3.0E-92 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PANTHER PTHR11537:SF137 8 242 3.0E-92 T 20-04-2016 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 SUPERFAMILY SSF81324 26 237 4.97E-53 T 20-04-2016 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 Gene3D G3DSA:1.10.287.70 28 237 1.2E-53 T 20-04-2016 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 Pfam PF00520 Ion transport protein 27 244 3.0E-34 T 20-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PRINTS PR00169 Potassium channel signature 62 85 1.1E-33 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PRINTS PR00169 Potassium channel signature 20 48 1.1E-33 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PRINTS PR00169 Potassium channel signature 153 176 1.1E-33 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PRINTS PR00169 Potassium channel signature 88 108 1.1E-33 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PRINTS PR00169 Potassium channel signature 211 237 1.1E-33 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PRINTS PR00169 Potassium channel signature 182 204 1.1E-33 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS00765 ef34830eda88f939d6528d6c0b58bf6e 278 PRINTS PR00169 Potassium channel signature 124 150 1.1E-33 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 PANTHER PTHR23151:SF8 5 170 1.3E-125 T 20-04-2016 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 PANTHER PTHR23151:SF8 188 442 1.3E-125 T 20-04-2016 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 Pfam PF02817 e3 binding domain 127 164 9.2E-12 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 Pfam PF00364 Biotin-requiring enzyme 5 77 2.8E-16 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 PANTHER PTHR23151 5 170 1.3E-125 T 20-04-2016 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 PANTHER PTHR23151 188 442 1.3E-125 T 20-04-2016 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 212 440 1.5E-72 T 20-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 Gene3D G3DSA:2.40.50.100 2 91 4.5E-26 T 20-04-2016 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 20-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 SUPERFAMILY SSF51230 3 89 3.93E-24 T 20-04-2016 IPR011053 Single hybrid motif APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 SUPERFAMILY SSF52777 211 440 2.18E-76 T 20-04-2016 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 SUPERFAMILY SSF47005 121 169 1.7E-8 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 Gene3D G3DSA:3.30.559.10 206 440 3.1E-74 T 20-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APS56_RS16530 8d7d162c8cee24f9fbb0fd8ab26766c7 446 Gene3D G3DSA:4.10.320.10 123 172 4.2E-14 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 Gene3D G3DSA:3.40.50.720 32 189 8.8E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 SUPERFAMILY SSF51735 30 196 5.21E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 38 162 8.6E-11 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 PANTHER PTHR22604:SF2 288 441 7.0E-97 T 20-04-2016 APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 PANTHER PTHR22604:SF2 224 269 7.0E-97 T 20-04-2016 APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 PANTHER PTHR22604:SF2 1 199 7.0E-97 T 20-04-2016 APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 PANTHER PTHR22604 288 441 7.0E-97 T 20-04-2016 APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 PANTHER PTHR22604 224 269 7.0E-97 T 20-04-2016 APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 PANTHER PTHR22604 1 199 7.0E-97 T 20-04-2016 APS56_RS13765 e7556dc20a0bc93f3f4a8eeb851581ef 452 SUPERFAMILY SSF55347 173 366 1.37E-5 T 20-04-2016 APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 Hamap MF_02040 Iron-sulfur cluster carrier protein. 95 349 34.816 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 Pfam PF01883 Domain of unknown function DUF59 5 55 8.7E-9 T 20-04-2016 IPR002744 Domain of unknown function DUF59 APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 Gene3D G3DSA:3.40.50.300 92 348 1.0E-94 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 PANTHER PTHR23264 1 378 1.6E-127 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 SUPERFAMILY SSF117916 1 88 6.54E-13 T 20-04-2016 APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 PANTHER PTHR23264:SF19 1 378 1.6E-127 T 20-04-2016 APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 SUPERFAMILY SSF52540 102 352 6.02E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 ProSitePatterns PS01215 Mrp family signature. 210 226 - T 20-04-2016 IPR000808 Mrp, conserved site GO:0005524 APS56_RS12440 956e09b7a79046955891ce76b7ad82db 378 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 100 348 3.5E-95 T 20-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APS56_RS06865 4dced93af6bd841aad71cd512e762bf1 132 SUPERFAMILY SSF54593 1 131 4.44E-35 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06865 4dced93af6bd841aad71cd512e762bf1 132 Gene3D G3DSA:3.10.180.10 1 131 1.7E-43 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06865 4dced93af6bd841aad71cd512e762bf1 132 PIRSF PIRSF021700 1 132 3.9E-36 T 20-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase APS56_RS06865 4dced93af6bd841aad71cd512e762bf1 132 PANTHER PTHR33990 2 132 2.2E-50 T 20-04-2016 APS56_RS06865 4dced93af6bd841aad71cd512e762bf1 132 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 129 3.6E-34 T 20-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase APS56_RS06865 4dced93af6bd841aad71cd512e762bf1 132 PANTHER PTHR33990:SF4 2 132 2.2E-50 T 20-04-2016 APS56_RS02535 4dced93af6bd841aad71cd512e762bf1 132 SUPERFAMILY SSF54593 1 131 4.44E-35 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02535 4dced93af6bd841aad71cd512e762bf1 132 Gene3D G3DSA:3.10.180.10 1 131 1.7E-43 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02535 4dced93af6bd841aad71cd512e762bf1 132 PIRSF PIRSF021700 1 132 3.9E-36 T 20-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase APS56_RS02535 4dced93af6bd841aad71cd512e762bf1 132 PANTHER PTHR33990 2 132 2.2E-50 T 20-04-2016 APS56_RS02535 4dced93af6bd841aad71cd512e762bf1 132 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 129 3.6E-34 T 20-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase APS56_RS02535 4dced93af6bd841aad71cd512e762bf1 132 PANTHER PTHR33990:SF4 2 132 2.2E-50 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Pfam PF13715 CarboxypepD_reg-like domain 109 190 1.1E-14 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Gene3D G3DSA:2.40.170.20 967 999 5.1E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Gene3D G3DSA:2.40.170.20 408 493 5.1E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Gene3D G3DSA:2.40.170.20 1039 1123 5.1E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Gene3D G3DSA:2.40.170.20 310 334 5.1E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Gene3D G3DSA:2.40.170.20 529 895 5.1E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 PANTHER PTHR11532:SF57 676 1121 3.0E-121 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 PANTHER PTHR11532:SF57 554 600 3.0E-121 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 PANTHER PTHR11532:SF57 99 459 3.0E-121 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 PANTHER PTHR11532:SF57 621 646 3.0E-121 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 PANTHER PTHR11532 676 1121 3.0E-121 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 PANTHER PTHR11532 554 600 3.0E-121 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 PANTHER PTHR11532 99 459 3.0E-121 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 PANTHER PTHR11532 621 646 3.0E-121 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Gene3D G3DSA:2.60.40.1120 109 192 5.1E-11 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 SUPERFAMILY SSF49464 107 188 6.8E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 107 1123 7.4E-173 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Gene3D G3DSA:2.170.130.10 199 309 5.4E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 282 312 1.4E-13 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 SMART SM00965 46 97 7.1E-4 T 20-04-2016 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 SUPERFAMILY SSF56935 527 874 3.15E-77 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 SUPERFAMILY SSF56935 1033 1123 3.15E-77 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 SUPERFAMILY SSF56935 187 329 3.15E-77 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 SUPERFAMILY SSF56935 404 493 3.15E-77 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 SUPERFAMILY SSF56935 958 1001 3.15E-77 T 20-04-2016 APS56_RS00960 0718cb7a59089db88199b8254c5fb0be 1123 Pfam PF07715 TonB-dependent Receptor Plug Domain 200 306 6.5E-22 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS03760 8a632b1c58757977d755659afc62f8b2 112 PANTHER PTHR30432 1 109 5.3E-26 T 20-04-2016 APS56_RS03760 8a632b1c58757977d755659afc62f8b2 112 SUPERFAMILY SSF46785 3 103 1.97E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS03760 8a632b1c58757977d755659afc62f8b2 112 Gene3D G3DSA:1.10.10.10 2 110 1.6E-37 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS03760 8a632b1c58757977d755659afc62f8b2 112 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 85 4.6E-11 T 20-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 SMART SM01005 243 367 4.2E-51 T 20-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 Gene3D G3DSA:2.40.37.10 225 367 4.6E-48 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 Pfam PF00842 Alanine racemase, C-terminal domain 245 365 7.7E-36 T 20-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PRINTS PR00992 Alanine racemase signature 205 232 5.4E-47 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PRINTS PR00992 Alanine racemase signature 66 84 5.4E-47 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PRINTS PR00992 Alanine racemase signature 127 139 5.4E-47 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PRINTS PR00992 Alanine racemase signature 161 172 5.4E-47 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PRINTS PR00992 Alanine racemase signature 349 362 5.4E-47 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PRINTS PR00992 Alanine racemase signature 30 46 5.4E-47 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PRINTS PR00992 Alanine racemase signature 259 274 5.4E-47 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PRINTS PR00992 Alanine racemase signature 298 315 5.4E-47 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 SUPERFAMILY SSF51419 11 239 5.09E-57 T 20-04-2016 IPR029066 PLP-binding barrel APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 SUPERFAMILY SSF50621 237 367 3.38E-41 T 20-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 Pfam PF01168 Alanine racemase, N-terminal domain 11 230 1.3E-55 T 20-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 Hamap MF_01201 Alanine racemase. 4 367 28.751 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 TIGRFAM TIGR00492 alr: alanine racemase 6 366 4.6E-97 T 20-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PANTHER PTHR30511:SF0 1 366 2.4E-117 T 20-04-2016 APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 Gene3D G3DSA:3.20.20.10 13 224 9.4E-63 T 20-04-2016 IPR029066 PLP-binding barrel APS56_RS11250 513995fc807622d93e87440cb98cc67a 369 PANTHER PTHR30511 1 366 2.4E-117 T 20-04-2016 APS56_RS06225 1ce2bdcceddb4a34c8386dd50159128b 256 PANTHER PTHR31571 26 239 1.6E-13 T 20-04-2016 APS56_RS06225 1ce2bdcceddb4a34c8386dd50159128b 256 Gene3D G3DSA:3.20.20.190 41 243 2.5E-7 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS06225 1ce2bdcceddb4a34c8386dd50159128b 256 SUPERFAMILY SSF51695 27 241 6.02E-18 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS06225 1ce2bdcceddb4a34c8386dd50159128b 256 PANTHER PTHR31571:SF1 26 239 1.6E-13 T 20-04-2016 APS56_RS05225 f8d7b0bef06e3626f65c9223472f066a 463 PANTHER PTHR30576:SF0 14 462 4.0E-85 T 20-04-2016 APS56_RS05225 f8d7b0bef06e3626f65c9223472f066a 463 Pfam PF02397 Bacterial sugar transferase 277 458 4.1E-52 T 20-04-2016 IPR003362 Bacterial sugar transferase APS56_RS05225 f8d7b0bef06e3626f65c9223472f066a 463 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 461 4.5E-103 T 20-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APS56_RS05225 f8d7b0bef06e3626f65c9223472f066a 463 PANTHER PTHR30576 14 462 4.0E-85 T 20-04-2016 APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 7 327 3.4E-105 T 20-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 PANTHER PTHR22572 70 297 1.9E-48 T 20-04-2016 APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 PANTHER PTHR22572:SF117 70 297 1.9E-48 T 20-04-2016 APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 SUPERFAMILY SSF51161 33 318 2.79E-78 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 260 294 9.1E-9 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 114 144 2.3E-8 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 180 1.4E-5 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 224 259 2.2E-6 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 4 327 33.587 T 20-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 21 89 3.9E-20 T 20-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Gene3D G3DSA:2.160.10.10 105 166 4.5E-15 T 20-04-2016 APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Gene3D G3DSA:2.160.10.10 167 267 2.8E-21 T 20-04-2016 APS56_RS02035 7279c32e305b76addbcf34a6c81b86f5 342 Gene3D G3DSA:2.160.10.10 268 338 3.3E-15 T 20-04-2016 APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Gene3D G3DSA:3.40.50.300 417 577 1.0E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Pfam PF04851 Type III restriction enzyme, res subunit 9 90 9.7E-11 T 20-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 SMART SM00487 7 423 3.4E-30 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 SUPERFAMILY SSF52540 457 581 9.08E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 SUPERFAMILY SSF52540 35 80 9.08E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 SMART SM00490 458 544 4.0E-19 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 661 41.274 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 SUPERFAMILY SSF46600 618 662 3.79E-6 T 20-04-2016 IPR001943 UVR domain GO:0005515 APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Gene3D G3DSA:3.30.2060.10 159 231 7.9E-11 T 20-04-2016 APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Pfam PF00271 Helicase conserved C-terminal domain 430 543 1.7E-19 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Gene3D G3DSA:3.40.50.300 4 87 2.1E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Gene3D G3DSA:3.40.50.300 386 406 2.1E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Gene3D G3DSA:3.40.50.300 276 336 2.1E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Pfam PF12344 Ultra-violet resistance protein B 550 591 6.6E-19 T 20-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 Gene3D G3DSA:4.10.860.10 615 664 1.1E-9 T 20-04-2016 IPR001943 UVR domain GO:0005515 APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 SUPERFAMILY SSF52540 3 413 3.28E-123 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 2 657 0.0 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APS56_RS04250 237426ec3f9b03aee53da8f85da9ed13 667 PANTHER PTHR24029 1 655 0.0 T 20-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APS56_RS12925 c0c184123fedc20132c7d53940e118fb 442 PANTHER PTHR34856 89 427 5.1E-78 T 20-04-2016 APS56_RS12925 c0c184123fedc20132c7d53940e118fb 442 PANTHER PTHR34856:SF4 89 427 5.1E-78 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Hamap MF_02033 Cell division protein FtsA [ftsA]. 2 438 28.699 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Gene3D G3DSA:3.90.640.10 233 295 1.4E-16 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 PANTHER PTHR32432:SF4 1 429 2.4E-118 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Pfam PF02491 SHS2 domain inserted in FTSA 81 159 1.2E-26 T 20-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Pfam PF14450 Cell division protein FtsA 7 191 4.8E-9 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Pfam PF14450 Cell division protein FtsA 205 377 1.1E-22 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Gene3D G3DSA:3.30.1490.110 82 151 1.2E-16 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 PANTHER PTHR32432 1 429 2.4E-118 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 PIRSF PIRSF003101 1 434 3.6E-133 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 SMART SM00842 6 194 3.5E-82 T 20-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Gene3D G3DSA:3.30.420.40 296 353 1.4E-29 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Gene3D G3DSA:3.30.420.40 208 232 1.4E-29 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Gene3D G3DSA:3.30.420.40 3 79 1.8E-22 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 Gene3D G3DSA:3.30.420.40 152 207 1.8E-22 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 SUPERFAMILY SSF53067 4 219 3.89E-51 T 20-04-2016 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 6 380 6.7E-113 T 20-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APS56_RS08445 775a4c276f9540e475bddf2634607fbe 438 SUPERFAMILY SSF53067 198 379 3.81E-40 T 20-04-2016 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 Gene3D G3DSA:1.20.58.410 4 92 9.0E-15 T 20-04-2016 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 SMART SM00937 62 177 1.0E-58 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 Pfam PF00472 RF-1 domain 211 319 1.7E-40 T 20-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 38.335 T 20-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 SUPERFAMILY SSF75620 8 351 2.09E-129 T 20-04-2016 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 PANTHER PTHR11075 1 354 5.3E-169 T 20-04-2016 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 Pfam PF03462 PCRF domain 9 202 1.7E-69 T 20-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 Gene3D G3DSA:3.30.160.20 209 287 5.8E-34 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APS56_RS04515 4374bd176cec62b5482412268ee97783 358 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 354 9.1E-150 T 20-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APS56_RS04515 4374bd176cec62b5482412268ee97783 358 PANTHER PTHR11075:SF9 1 354 5.3E-169 T 20-04-2016 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 Gene3D G3DSA:3.40.720.10 175 214 5.1E-36 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 Gene3D G3DSA:3.40.720.10 252 391 5.1E-36 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 Gene3D G3DSA:3.40.720.10 44 150 6.0E-26 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 PANTHER PTHR10342 244 507 4.6E-84 T 20-04-2016 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 PANTHER PTHR10342 44 228 4.6E-84 T 20-04-2016 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 Pfam PF00884 Sulfatase 176 348 1.1E-23 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 Pfam PF00884 Sulfatase 46 149 2.8E-15 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 SUPERFAMILY SSF53649 45 404 1.74E-85 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 SUPERFAMILY SSF53649 443 488 1.74E-85 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 PANTHER PTHR10342:SF199 244 507 4.6E-84 T 20-04-2016 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 PANTHER PTHR10342:SF199 44 228 4.6E-84 T 20-04-2016 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 Gene3D G3DSA:3.30.1120.10 392 406 2.8E-19 T 20-04-2016 APS56_RS05645 2e061b60de540022c5f6a2d2c76b3a2e 583 Gene3D G3DSA:3.30.1120.10 445 489 2.8E-19 T 20-04-2016 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 PANTHER PTHR32248:SF4 1 486 8.1E-138 T 20-04-2016 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 Pfam PF04552 Sigma-54, DNA binding domain 327 484 8.6E-51 T 20-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 Pfam PF04963 Sigma-54 factor, core binding domain 112 304 4.9E-53 T 20-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 484 1.4E-119 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 PANTHER PTHR32248 1 486 8.1E-138 T 20-04-2016 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 465 472 - T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 PRINTS PR00045 Sigma-54 factor signature 386 398 2.6E-22 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 PRINTS PR00045 Sigma-54 factor signature 402 413 2.6E-22 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 PRINTS PR00045 Sigma-54 factor signature 460 478 2.6E-22 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 PRINTS PR00045 Sigma-54 factor signature 186 203 2.6E-22 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 PIRSF PIRSF000774 1 486 6.2E-133 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APS56_RS08145 e43b29864876c45aa6067591db4ab16a 486 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 3 47 4.6E-12 T 20-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 Pfam PF04055 Radical SAM superfamily 173 359 3.7E-32 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 PANTHER PTHR11918:SF43 6 482 1.1E-206 T 20-04-2016 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 24 477 66.682 T 20-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 PANTHER PTHR11918 6 482 1.1E-206 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 SUPERFAMILY SSF102114 164 408 1.31E-58 T 20-04-2016 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 SMART SM00729 169 400 4.0E-52 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 173 193 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 Gene3D G3DSA:3.80.30.20 167 412 3.9E-78 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 Gene3D G3DSA:2.40.50.140 420 476 1.9E-4 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 Pfam PF01938 TRAM domain 420 475 1.2E-13 T 20-04-2016 IPR002792 TRAM domain APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 25 474 3.6E-133 T 20-04-2016 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 Pfam PF00919 Uncharacterized protein family UPF0004 25 125 4.9E-31 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APS56_RS07210 32f2bdf4290be1b4c33cbdc333ec409e 482 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 25 473 2.6E-135 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APS56_RS09935 da8cccc30e670cefaa494d17f1cdf91a 456 Gene3D G3DSA:3.40.720.10 13 367 4.1E-100 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09935 da8cccc30e670cefaa494d17f1cdf91a 456 ProSitePatterns PS00523 Sulfatases signature 1. 62 74 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09935 da8cccc30e670cefaa494d17f1cdf91a 456 SUPERFAMILY SSF53649 14 443 9.3E-120 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09935 da8cccc30e670cefaa494d17f1cdf91a 456 Pfam PF00884 Sulfatase 16 347 7.3E-71 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09935 da8cccc30e670cefaa494d17f1cdf91a 456 Gene3D G3DSA:3.30.1120.10 389 442 1.3E-13 T 20-04-2016 APS56_RS09935 da8cccc30e670cefaa494d17f1cdf91a 456 PANTHER PTHR10342 14 444 5.0E-139 T 20-04-2016 APS56_RS09935 da8cccc30e670cefaa494d17f1cdf91a 456 PANTHER PTHR10342:SF199 14 444 5.0E-139 T 20-04-2016 APS56_RS10830 cdeef3ff778450309499b792e847ba80 347 PANTHER PTHR10366 2 346 1.3E-164 T 20-04-2016 APS56_RS10830 cdeef3ff778450309499b792e847ba80 347 SUPERFAMILY SSF51735 1 345 8.18E-94 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10830 cdeef3ff778450309499b792e847ba80 347 PANTHER PTHR10366:SF41 2 346 1.3E-164 T 20-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APS56_RS10830 cdeef3ff778450309499b792e847ba80 347 Gene3D G3DSA:3.40.50.720 1 187 1.1E-66 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10830 cdeef3ff778450309499b792e847ba80 347 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 332 9.5E-143 T 20-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APS56_RS10830 cdeef3ff778450309499b792e847ba80 347 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 319 6.4E-101 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10830 cdeef3ff778450309499b792e847ba80 347 Gene3D G3DSA:3.90.25.10 188 343 1.4E-54 T 20-04-2016 APS56_RS09980 0509f59727c9525a47a5ad60d653c723 402 PANTHER PTHR36845:SF1 1 395 7.0E-86 T 20-04-2016 APS56_RS09980 0509f59727c9525a47a5ad60d653c723 402 PANTHER PTHR36845 1 395 7.0E-86 T 20-04-2016 APS56_RS09980 0509f59727c9525a47a5ad60d653c723 402 Pfam PF07470 Glycosyl Hydrolase Family 88 65 351 5.4E-21 T 20-04-2016 IPR010905 Glycosyl hydrolase, family 88 APS56_RS09980 0509f59727c9525a47a5ad60d653c723 402 SUPERFAMILY SSF48208 58 401 3.71E-99 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS09980 0509f59727c9525a47a5ad60d653c723 402 Gene3D G3DSA:1.50.10.10 57 401 2.6E-132 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 Pfam PF01177 Asp/Glu/Hydantoin racemase 145 236 1.4E-9 T 20-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 Gene3D G3DSA:3.40.50.1860 61 265 1.9E-36 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 PANTHER PTHR21198:SF2 160 241 2.4E-30 T 20-04-2016 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 PANTHER PTHR21198:SF2 58 143 2.4E-30 T 20-04-2016 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 166 174 - T 20-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 PANTHER PTHR21198 160 241 2.4E-30 T 20-04-2016 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 PANTHER PTHR21198 58 143 2.4E-30 T 20-04-2016 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 SUPERFAMILY SSF53681 64 206 3.92E-15 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 352 362 - T 20-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08915 2132bad34d8df4efa2c08ec65fa7274e 512 SUPERFAMILY SSF53681 338 415 5.45E-7 T 20-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS09205 eabc0f0e26398b788ac59c4ae0e00fd3 324 Gene3D G3DSA:1.10.600.10 5 323 1.1E-95 T 20-04-2016 IPR008949 Isoprenoid synthase domain APS56_RS09205 eabc0f0e26398b788ac59c4ae0e00fd3 324 PANTHER PTHR12001:SF23 4 324 3.5E-98 T 20-04-2016 APS56_RS09205 eabc0f0e26398b788ac59c4ae0e00fd3 324 Pfam PF00348 Polyprenyl synthetase 25 273 2.8E-73 T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APS56_RS09205 eabc0f0e26398b788ac59c4ae0e00fd3 324 PANTHER PTHR12001 4 324 3.5E-98 T 20-04-2016 IPR017446 Polyprenyl synthetase-related APS56_RS09205 eabc0f0e26398b788ac59c4ae0e00fd3 324 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 201 213 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APS56_RS09205 eabc0f0e26398b788ac59c4ae0e00fd3 324 SUPERFAMILY SSF48576 19 323 1.87E-89 T 20-04-2016 IPR008949 Isoprenoid synthase domain APS56_RS09205 eabc0f0e26398b788ac59c4ae0e00fd3 324 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 76 90 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APS56_RS16420 7355041808695a974410d9db479d307a 524 SMART SM00388 298 366 1.4E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS16420 7355041808695a974410d9db479d307a 524 SUPERFAMILY SSF55874 356 522 9.95E-39 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS16420 7355041808695a974410d9db479d307a 524 SMART SM00387 412 524 7.0E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS16420 7355041808695a974410d9db479d307a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 484 502 1.8E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS16420 7355041808695a974410d9db479d307a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 463 1.8E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS16420 7355041808695a974410d9db479d307a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 477 1.8E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS16420 7355041808695a974410d9db479d307a 524 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 521 1.8E-15 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS16420 7355041808695a974410d9db479d307a 524 SUPERFAMILY SSF47384 290 367 1.84E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS16420 7355041808695a974410d9db479d307a 524 PANTHER PTHR24423 291 522 1.4E-54 T 20-04-2016 APS56_RS16420 7355041808695a974410d9db479d307a 524 Gene3D G3DSA:3.30.565.10 353 522 2.0E-42 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS16420 7355041808695a974410d9db479d307a 524 Gene3D G3DSA:1.10.287.130 292 352 2.6E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS16420 7355041808695a974410d9db479d307a 524 Pfam PF00512 His Kinase A (phospho-acceptor) domain 299 364 4.2E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS16420 7355041808695a974410d9db479d307a 524 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 415 522 2.0E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 PANTHER PTHR10342 162 492 5.1E-131 T 20-04-2016 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 PANTHER PTHR10342 3 139 5.1E-131 T 20-04-2016 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 ProSitePatterns PS00523 Sulfatases signature 1. 72 84 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 Pfam PF00884 Sulfatase 27 391 8.2E-65 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 Gene3D G3DSA:3.40.720.10 177 410 2.1E-104 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 Gene3D G3DSA:3.40.720.10 24 143 2.1E-104 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 PANTHER PTHR10342:SF199 162 492 5.1E-131 T 20-04-2016 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 PANTHER PTHR10342:SF199 3 139 5.1E-131 T 20-04-2016 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 SUPERFAMILY SSF53649 25 144 3.05E-118 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 SUPERFAMILY SSF53649 178 488 3.05E-118 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09675 6fd0325fe8f35d5753e464a755d5870d 498 Gene3D G3DSA:3.30.1120.10 414 493 2.4E-18 T 20-04-2016 APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 PANTHER PTHR32479 19 453 3.9E-195 T 20-04-2016 APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 SUPERFAMILY SSF54862 279 382 2.22E-16 T 20-04-2016 APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 301 312 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 Gene3D G3DSA:3.40.50.10420 58 121 8.0E-38 T 20-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 Gene3D G3DSA:3.40.50.10420 183 272 8.0E-38 T 20-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 65 273 1.3E-44 T 20-04-2016 IPR003741 LUD domain APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 Gene3D G3DSA:1.10.1060.10 296 385 4.4E-12 T 20-04-2016 APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 SUPERFAMILY SSF100950 58 82 2.26E-31 T 20-04-2016 APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 SUPERFAMILY SSF100950 128 283 2.26E-31 T 20-04-2016 APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 Pfam PF11870 Domain of unknown function (DUF3390) 376 452 7.9E-7 T 20-04-2016 IPR024569 4Fe-4S binding protein, C-terminal APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 Pfam PF13183 4Fe-4S dicluster domain 299 364 7.4E-10 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS06215 a744a14e739b96ceacd843164eb9a55f 460 PANTHER PTHR32479:SF10 19 453 3.9E-195 T 20-04-2016 APS56_RS14570 dd11bf73d7d6f557851df4442b03d51d 337 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 255 1.3E-28 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APS56_RS14570 dd11bf73d7d6f557851df4442b03d51d 337 PANTHER PTHR30469 4 335 1.5E-63 T 20-04-2016 APS56_RS14570 dd11bf73d7d6f557851df4442b03d51d 337 Gene3D G3DSA:2.40.50.100 151 183 1.3E-16 T 20-04-2016 APS56_RS14570 dd11bf73d7d6f557851df4442b03d51d 337 Gene3D G3DSA:2.40.50.100 57 90 1.3E-16 T 20-04-2016 APS56_RS14570 dd11bf73d7d6f557851df4442b03d51d 337 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 32 336 1.1E-70 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APS56_RS14570 dd11bf73d7d6f557851df4442b03d51d 337 SUPERFAMILY SSF111369 46 263 4.18E-33 T 20-04-2016 APS56_RS06610 21f9c9471bf3556a9a53b51fdb94cd74 322 Pfam PF01548 Transposase 9 145 3.7E-21 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APS56_RS06610 21f9c9471bf3556a9a53b51fdb94cd74 322 PANTHER PTHR33055:SF3 4 315 8.4E-59 T 20-04-2016 APS56_RS06610 21f9c9471bf3556a9a53b51fdb94cd74 322 PANTHER PTHR33055 4 315 8.4E-59 T 20-04-2016 APS56_RS06610 21f9c9471bf3556a9a53b51fdb94cd74 322 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 278 8.1E-23 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APS56_RS01205 21f9c9471bf3556a9a53b51fdb94cd74 322 Pfam PF01548 Transposase 9 145 3.7E-21 T 20-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 APS56_RS01205 21f9c9471bf3556a9a53b51fdb94cd74 322 PANTHER PTHR33055:SF3 4 315 8.4E-59 T 20-04-2016 APS56_RS01205 21f9c9471bf3556a9a53b51fdb94cd74 322 PANTHER PTHR33055 4 315 8.4E-59 T 20-04-2016 APS56_RS01205 21f9c9471bf3556a9a53b51fdb94cd74 322 Pfam PF02371 Transposase IS116/IS110/IS902 family 192 278 8.1E-23 T 20-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 SUPERFAMILY SSF51011 591 671 6.76E-19 T 20-04-2016 APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 Pfam PF17137 Domain of unknown function (DUF5110) 691 759 2.1E-9 T 20-04-2016 IPR033403 Domain of unknown function DUF5110 APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 Pfam PF13802 Galactose mutarotase-like 144 210 2.5E-19 T 20-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 Pfam PF16338 Domain of unknown function (DUF4968) 25 118 6.5E-22 T 20-04-2016 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 PANTHER PTHR22762:SF7 37 798 1.7E-250 T 20-04-2016 APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 Pfam PF01055 Glycosyl hydrolases family 31 231 675 3.3E-149 T 20-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 SUPERFAMILY SSF74650 6 238 6.28E-52 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 SUPERFAMILY SSF51445 240 589 2.62E-94 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 PANTHER PTHR22762 37 798 1.7E-250 T 20-04-2016 APS56_RS11085 adf16d66d9075a9a4951e70a8655b0c0 800 ProSitePatterns PS00129 Glycosyl hydrolases family 31 active site. 403 410 - T 20-04-2016 IPR030458 Glycosyl hydrolases family 31, active site APS56_RS15450 6f7e039156eb2e16daddb22169ef3327 424 Gene3D G3DSA:2.30.40.10 306 404 3.7E-14 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15450 6f7e039156eb2e16daddb22169ef3327 424 PANTHER PTHR11647 12 89 4.7E-14 T 20-04-2016 APS56_RS15450 6f7e039156eb2e16daddb22169ef3327 424 SUPERFAMILY SSF51338 369 396 1.15E-10 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15450 6f7e039156eb2e16daddb22169ef3327 424 SUPERFAMILY SSF51338 25 87 1.15E-10 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15450 6f7e039156eb2e16daddb22169ef3327 424 SUPERFAMILY SSF51556 221 377 1.62E-8 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS15450 6f7e039156eb2e16daddb22169ef3327 424 Gene3D G3DSA:2.30.40.10 22 142 1.5E-10 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15450 6f7e039156eb2e16daddb22169ef3327 424 Pfam PF01979 Amidohydrolase family 306 384 9.2E-9 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APS56_RS15450 6f7e039156eb2e16daddb22169ef3327 424 PANTHER PTHR11647:SF71 12 89 4.7E-14 T 20-04-2016 APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 367 1.0E-7 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 348 1.0E-7 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 1.0E-7 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 SMART SM00091 15 81 3.7E-11 T 20-04-2016 IPR000014 PAS domain APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 Gene3D G3DSA:3.30.565.10 192 368 3.0E-27 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 Pfam PF08447 PAS fold 38 121 2.1E-14 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 SMART SM00387 259 369 5.2E-12 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 SMART SM00086 88 130 5.9E-10 T 20-04-2016 IPR001610 PAC motif APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 SUPERFAMILY SSF55785 20 132 5.32E-25 T 20-04-2016 IPR000014 PAS domain APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 264 367 9.6E-13 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 137 1.3E-25 T 20-04-2016 IPR000014 PAS domain APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 Gene3D G3DSA:3.30.450.20 17 163 3.5E-26 T 20-04-2016 APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 PANTHER PTHR24423 17 366 8.5E-56 T 20-04-2016 APS56_RS14310 82a0cb26b3583b673aa7eb94e2a7ce35 369 SUPERFAMILY SSF55874 219 366 3.8E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS02400 b2e09c96acc2f93bdd3a9cff6aae3efc 489 PANTHER PTHR33451:SF3 8 489 2.8E-146 T 20-04-2016 APS56_RS02400 b2e09c96acc2f93bdd3a9cff6aae3efc 489 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 27 484 1.2E-113 T 20-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 APS56_RS02400 b2e09c96acc2f93bdd3a9cff6aae3efc 489 Pfam PF03553 Na+/H+ antiporter family 182 480 4.0E-50 T 20-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 APS56_RS02400 b2e09c96acc2f93bdd3a9cff6aae3efc 489 PANTHER PTHR33451 8 489 2.8E-146 T 20-04-2016 APS56_RS14105 7818533034fb4274a86cd7503d014357 218 PANTHER PTHR35809 1 218 5.8E-63 T 20-04-2016 APS56_RS14105 7818533034fb4274a86cd7503d014357 218 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 13 215 8.4E-50 T 20-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APS56_RS14105 7818533034fb4274a86cd7503d014357 218 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 1 217 30.311 T 20-04-2016 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APS56_RS14105 7818533034fb4274a86cd7503d014357 218 Pfam PF02666 Phosphatidylserine decarboxylase 47 213 2.3E-27 T 20-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APS56_RS10640 5a3d920826b4fcf82f536cac539a0bbd 339 Pfam PF00483 Nucleotidyl transferase 7 236 5.8E-21 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APS56_RS10640 5a3d920826b4fcf82f536cac539a0bbd 339 Gene3D G3DSA:2.160.10.10 258 336 5.7E-10 T 20-04-2016 APS56_RS10640 5a3d920826b4fcf82f536cac539a0bbd 339 Gene3D G3DSA:3.90.550.10 1 235 9.2E-45 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS10640 5a3d920826b4fcf82f536cac539a0bbd 339 PANTHER PTHR22572 2 321 2.4E-51 T 20-04-2016 APS56_RS10640 5a3d920826b4fcf82f536cac539a0bbd 339 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 293 4.7E-5 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS10640 5a3d920826b4fcf82f536cac539a0bbd 339 SUPERFAMILY SSF53448 1 298 1.57E-47 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 Pfam PF00579 tRNA synthetases class I (W and Y) 3 277 1.1E-56 T 20-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 SUPERFAMILY SSF52374 2 321 4.27E-82 T 20-04-2016 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 Gene3D G3DSA:1.10.240.10 202 290 4.5E-30 T 20-04-2016 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 PANTHER PTHR10055 1 322 7.3E-118 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 5.7E-21 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 5.7E-21 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 5.7E-21 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 141 162 5.7E-21 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 321 2.8E-84 T 20-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 PANTHER PTHR10055:SF11 1 322 7.3E-118 T 20-04-2016 APS56_RS10595 7742ca8737dc0449e90c1285e1cea4ee 322 Gene3D G3DSA:3.40.50.620 2 201 7.6E-73 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS13430 ecaf3fb3c3078d5cc921b9bb735871ed 315 SMART SM00460 171 237 6.7E-17 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS13430 ecaf3fb3c3078d5cc921b9bb735871ed 315 Gene3D G3DSA:3.90.260.10 174 269 1.4E-14 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS13430 ecaf3fb3c3078d5cc921b9bb735871ed 315 PANTHER PTHR33490:SF6 1 299 4.5E-45 T 20-04-2016 APS56_RS13430 ecaf3fb3c3078d5cc921b9bb735871ed 315 PANTHER PTHR33490 1 299 4.5E-45 T 20-04-2016 APS56_RS13430 ecaf3fb3c3078d5cc921b9bb735871ed 315 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 6 81 4.7E-13 T 20-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal APS56_RS13430 ecaf3fb3c3078d5cc921b9bb735871ed 315 Pfam PF01841 Transglutaminase-like superfamily 136 235 3.3E-23 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS13430 ecaf3fb3c3078d5cc921b9bb735871ed 315 SUPERFAMILY SSF54001 8 269 1.32E-43 T 20-04-2016 APS56_RS07475 bdfcbe8f46edebce3b28bbc50689496d 258 SUPERFAMILY SSF53633 4 248 2.23E-47 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS07475 bdfcbe8f46edebce3b28bbc50689496d 258 PIRSF PIRSF000728 1 257 5.9E-66 T 20-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07475 bdfcbe8f46edebce3b28bbc50689496d 258 Gene3D G3DSA:3.40.1160.10 3 239 1.5E-65 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS07475 bdfcbe8f46edebce3b28bbc50689496d 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 6 237 5.4E-54 T 20-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07475 bdfcbe8f46edebce3b28bbc50689496d 258 PANTHER PTHR23342 6 237 1.1E-58 T 20-04-2016 APS56_RS07475 bdfcbe8f46edebce3b28bbc50689496d 258 Pfam PF00696 Amino acid kinase family 5 235 3.0E-33 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 20-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 PIRSF PIRSF000130 1 490 1.9E-204 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 Pfam PF00571 CBS domain 154 207 1.2E-6 T 20-04-2016 IPR000644 CBS domain APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 Pfam PF00571 CBS domain 97 144 1.9E-9 T 20-04-2016 IPR000644 CBS domain APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 SMART SM00116 161 209 3.1E-5 T 20-04-2016 IPR000644 CBS domain APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 SMART SM00116 100 148 2.1E-6 T 20-04-2016 IPR000644 CBS domain APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 PANTHER PTHR11911:SF6 302 490 3.6E-237 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 PANTHER PTHR11911:SF6 1 284 3.6E-237 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 Gene3D G3DSA:3.20.20.70 7 489 1.1E-197 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 477 2.9E-162 T 20-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 PANTHER PTHR11911 302 490 3.6E-237 T 20-04-2016 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 PANTHER PTHR11911 1 284 3.6E-237 T 20-04-2016 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 SMART SM01240 11 477 0.0 T 20-04-2016 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 490 83.519 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 SUPERFAMILY SSF51412 220 481 4.19E-124 T 20-04-2016 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 SUPERFAMILY SSF51412 8 94 4.19E-124 T 20-04-2016 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 SUPERFAMILY SSF54631 97 207 4.8E-29 T 20-04-2016 APS56_RS04520 e25343aa63d2526c950fa109307234ba 490 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 459 1.1E-187 T 20-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APS56_RS08550 401063c9e2ab15ecf155c5fb3d1bc6b1 182 ProSitePatterns PS00194 Thioredoxin family active site. 43 61 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APS56_RS08550 401063c9e2ab15ecf155c5fb3d1bc6b1 182 Gene3D G3DSA:3.40.30.10 22 155 4.6E-28 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS08550 401063c9e2ab15ecf155c5fb3d1bc6b1 182 Pfam PF13098 Thioredoxin-like domain 36 151 8.3E-13 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS08550 401063c9e2ab15ecf155c5fb3d1bc6b1 182 SUPERFAMILY SSF52833 16 161 7.91E-27 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS06020 4263901b11b318e5af127e8e76a5a6bd 831 Gene3D G3DSA:2.70.98.50 29 410 5.3E-142 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS06020 4263901b11b318e5af127e8e76a5a6bd 831 SUPERFAMILY SSF48208 278 770 9.86E-91 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS06020 4263901b11b318e5af127e8e76a5a6bd 831 PIRSF PIRSF007663 6 791 1.8E-289 T 20-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 APS56_RS06020 4263901b11b318e5af127e8e76a5a6bd 831 PANTHER PTHR31084 21 807 0.0 T 20-04-2016 APS56_RS06020 4263901b11b318e5af127e8e76a5a6bd 831 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 29 275 7.4E-79 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS06020 4263901b11b318e5af127e8e76a5a6bd 831 PANTHER PTHR31084:SF4 21 807 0.0 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 Gene3D G3DSA:3.50.50.60 233 403 4.4E-41 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 PRINTS PR00419 Adrenodoxin reductase family signature 145 167 8.8E-23 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 PRINTS PR00419 Adrenodoxin reductase family signature 283 297 8.8E-23 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 PRINTS PR00419 Adrenodoxin reductase family signature 210 220 8.8E-23 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 PRINTS PR00419 Adrenodoxin reductase family signature 168 181 8.8E-23 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 476 2.5E-211 T 20-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 SUPERFAMILY SSF51971 142 403 1.41E-63 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 SUPERFAMILY SSF46548 2 154 5.76E-36 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 PANTHER PTHR11938:SF75 27 316 2.2E-154 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 PANTHER PTHR11938:SF75 332 470 2.2E-154 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 145 458 7.0E-23 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 Gene3D G3DSA:1.10.1060.10 3 146 3.1E-40 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 PANTHER PTHR11938 27 316 2.2E-154 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 PANTHER PTHR11938 332 470 2.2E-154 T 20-04-2016 APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 Gene3D G3DSA:3.40.50.720 147 232 5.2E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 Gene3D G3DSA:3.40.50.720 405 479 5.2E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09430 0fb4715a75ee9637a29bafbcd9d11ed7 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 131 1.5E-24 T 20-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 Gene3D G3DSA:3.10.450.50 473 576 3.7E-13 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 SUPERFAMILY SSF51338 427 458 3.81E-15 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 SUPERFAMILY SSF51338 20 78 3.81E-15 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 SUPERFAMILY SSF51556 356 428 2.4E-43 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 SUPERFAMILY SSF51556 77 319 2.4E-43 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 PANTHER PTHR11271 29 318 6.3E-36 T 20-04-2016 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 PANTHER PTHR11271 355 491 6.3E-36 T 20-04-2016 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 SUPERFAMILY SSF54427 471 577 1.04E-24 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 Gene3D G3DSA:2.30.40.10 20 79 9.8E-26 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 Gene3D G3DSA:2.30.40.10 439 468 9.8E-26 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 Gene3D G3DSA:2.30.40.10 409 438 3.0E-5 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 PANTHER PTHR11271:SF33 29 318 6.3E-36 T 20-04-2016 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 PANTHER PTHR11271:SF33 355 491 6.3E-36 T 20-04-2016 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 Gene3D G3DSA:3.20.20.140 338 408 2.2E-45 T 20-04-2016 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 Gene3D G3DSA:3.20.20.140 80 300 2.2E-45 T 20-04-2016 APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 Pfam PF12680 SnoaL-like domain 479 574 3.7E-9 T 20-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APS56_RS15915 939e0f20e7df99e7cfe296c476119a02 579 Pfam PF01979 Amidohydrolase family 74 461 9.9E-30 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 SUPERFAMILY SSF51445 347 638 1.5E-86 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Pfam PF16353 Domain of unknown function(DUF4981) 654 741 9.3E-18 T 20-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Gene3D G3DSA:2.60.40.320 227 345 5.5E-29 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Gene3D G3DSA:2.60.120.260 21 226 1.0E-64 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 347 642 1.3E-95 T 20-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Pfam PF02929 Beta galactosidase small chain 771 1043 1.1E-73 T 20-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 SUPERFAMILY SSF74650 752 1045 9.73E-81 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 SUPERFAMILY SSF49303 636 744 3.02E-21 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Gene3D G3DSA:3.20.20.80 346 638 5.1E-98 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 165 180 2.1E-30 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 461 476 2.1E-30 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 356 370 2.1E-30 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 387 405 2.1E-30 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 544 559 2.1E-30 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 SMART SM01038 767 1044 1.4E-111 T 20-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 SUPERFAMILY SSF49785 27 237 2.31E-51 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PANTHER PTHR10066:SF72 609 1049 0.0 T 20-04-2016 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PANTHER PTHR10066:SF72 1 589 0.0 T 20-04-2016 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 66 234 1.4E-36 T 20-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Pfam PF00703 Glycosyl hydrolases family 2 239 345 7.8E-14 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 461 475 - T 20-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Gene3D G3DSA:2.70.98.10 754 1045 6.5E-84 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 SUPERFAMILY SSF49303 239 345 8.35E-20 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PANTHER PTHR10066 609 1049 0.0 T 20-04-2016 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 PANTHER PTHR10066 1 589 0.0 T 20-04-2016 APS56_RS13755 3fea72a408148f0417c2505f69df0f21 1049 Gene3D G3DSA:2.60.40.320 640 742 1.2E-22 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 SUPERFAMILY SSF74650 351 610 5.23E-65 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 351 604 2.0E-75 T 20-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 Gene3D G3DSA:1.50.10.100 51 364 2.0E-52 T 20-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 Gene3D G3DSA:2.70.98.10 365 614 2.3E-74 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 Gene3D G3DSA:2.60.220.10 615 710 1.6E-23 T 20-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 618 680 2.7E-19 T 20-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 PANTHER PTHR38481:SF1 19 686 6.1E-73 T 20-04-2016 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 SUPERFAMILY SSF49863 617 697 2.16E-18 T 20-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 SUPERFAMILY SSF48230 51 359 8.79E-49 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 33 336 6.5E-37 T 20-04-2016 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical APS56_RS13745 f9ee4348dc1dba0bf32e0a924d3e53f1 719 PANTHER PTHR38481 19 686 6.1E-73 T 20-04-2016 APS56_RS05445 ee1ef312bcd8e468b37859a951fa77e0 741 SUPERFAMILY SSF102114 337 528 1.37E-21 T 20-04-2016 APS56_RS05445 ee1ef312bcd8e468b37859a951fa77e0 741 PANTHER PTHR11918 367 528 7.4E-16 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APS56_RS05445 ee1ef312bcd8e468b37859a951fa77e0 741 SMART SM00729 360 569 1.3E-9 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS05445 ee1ef312bcd8e468b37859a951fa77e0 741 Pfam PF04055 Radical SAM superfamily 365 524 4.1E-7 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS05445 ee1ef312bcd8e468b37859a951fa77e0 741 Gene3D G3DSA:3.80.30.20 365 533 4.9E-18 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APS56_RS04980 e62395c15c858e5de1946792d3af4f8f 262 Gene3D G3DSA:3.40.1700.10 121 245 2.4E-45 T 20-04-2016 APS56_RS04980 e62395c15c858e5de1946792d3af4f8f 262 PANTHER PTHR34185:SF1 12 259 1.9E-73 T 20-04-2016 APS56_RS04980 e62395c15c858e5de1946792d3af4f8f 262 PIRSF PIRSF004793 4 262 4.9E-71 T 20-04-2016 IPR014046 Diadenylate cyclase-like APS56_RS04980 e62395c15c858e5de1946792d3af4f8f 262 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 126 243 2.6E-40 T 20-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal APS56_RS04980 e62395c15c858e5de1946792d3af4f8f 262 SUPERFAMILY SSF143597 40 246 6.93E-60 T 20-04-2016 APS56_RS04980 e62395c15c858e5de1946792d3af4f8f 262 PANTHER PTHR34185 12 259 1.9E-73 T 20-04-2016 APS56_RS03135 a3a459d469b69ae534e75b3448fc06c1 239 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 2 231 8.4E-91 T 20-04-2016 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 APS56_RS03135 a3a459d469b69ae534e75b3448fc06c1 239 SUPERFAMILY SSF102588 3 235 4.97E-47 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS03135 a3a459d469b69ae534e75b3448fc06c1 239 Gene3D G3DSA:3.40.50.10320 2 235 1.1E-57 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS03135 a3a459d469b69ae534e75b3448fc06c1 239 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 122 5.5E-20 T 20-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APS56_RS03135 a3a459d469b69ae534e75b3448fc06c1 239 PANTHER PTHR12993 1 186 1.0E-36 T 20-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PANTHER PTHR11573 397 525 4.4E-241 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PANTHER PTHR11573 545 851 4.4E-241 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PANTHER PTHR11573 32 372 4.4E-241 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 Pfam PF02867 Ribonucleotide reductase, barrel domain 111 643 3.6E-130 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 Gene3D G3DSA:3.20.70.20 485 530 6.5E-116 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 Gene3D G3DSA:3.20.70.20 25 447 6.5E-116 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 Gene3D G3DSA:3.20.70.20 602 649 6.5E-116 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 SUPERFAMILY SSF51998 261 447 1.31E-117 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 SUPERFAMILY SSF51998 27 230 1.31E-117 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 SUPERFAMILY SSF51998 485 663 1.31E-117 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PANTHER PTHR11573:SF3 397 525 4.4E-241 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PANTHER PTHR11573:SF3 545 851 4.4E-241 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PANTHER PTHR11573:SF3 32 372 4.4E-241 T 20-04-2016 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 28 92 1.8E-7 T 20-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 33 652 1.9E-166 T 20-04-2016 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PRINTS PR01183 Ribonucleotide reductase large chain signature 188 207 1.5E-17 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PRINTS PR01183 Ribonucleotide reductase large chain signature 427 450 1.5E-17 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PRINTS PR01183 Ribonucleotide reductase large chain signature 485 512 1.5E-17 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS05050 5ddc1b41b3baf75a4b017e1f8dc22815 851 PRINTS PR01183 Ribonucleotide reductase large chain signature 399 421 1.5E-17 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS00230 2c045ae95180722fc9b9ea8e138b533e 194 PANTHER PTHR24567 11 186 2.2E-23 T 20-04-2016 APS56_RS00230 2c045ae95180722fc9b9ea8e138b533e 194 Gene3D G3DSA:2.60.120.10 4 156 1.1E-41 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS00230 2c045ae95180722fc9b9ea8e138b533e 194 PANTHER PTHR24567:SF33 11 186 2.2E-23 T 20-04-2016 APS56_RS00230 2c045ae95180722fc9b9ea8e138b533e 194 SUPERFAMILY SSF51206 18 142 5.1E-26 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS00230 2c045ae95180722fc9b9ea8e138b533e 194 Pfam PF00027 Cyclic nucleotide-binding domain 31 117 5.9E-10 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 PANTHER PTHR10030 3 407 3.7E-70 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 329 350 8.5E-20 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 128 144 8.5E-20 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 173 192 8.5E-20 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 PRINTS PR00741 Glycosyl hydrolase family 29 signature 362 384 8.5E-20 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 SMART SM00812 39 421 2.0E-92 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 SUPERFAMILY SSF51445 50 379 1.9E-82 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 PIRSF PIRSF001092 12 475 2.4E-106 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 Pfam PF01120 Alpha-L-fucosidase 49 376 1.4E-76 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 PANTHER PTHR10030:SF25 3 407 3.7E-70 T 20-04-2016 APS56_RS13695 cdecd86e77ade7ab593b2e7e44c3f846 478 Gene3D G3DSA:3.20.20.80 49 379 1.6E-86 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS10220 5b7a96cfb3c92dc2186102973f0d7a07 344 PANTHER PTHR30477:SF3 5 280 1.7E-98 T 20-04-2016 APS56_RS10220 5b7a96cfb3c92dc2186102973f0d7a07 344 Pfam PF00950 ABC 3 transport family 1 247 3.0E-69 T 20-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APS56_RS10220 5b7a96cfb3c92dc2186102973f0d7a07 344 SUPERFAMILY SSF81345 2 243 7.85E-27 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APS56_RS10220 5b7a96cfb3c92dc2186102973f0d7a07 344 Gene3D G3DSA:1.10.3470.10 18 243 4.2E-14 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APS56_RS10220 5b7a96cfb3c92dc2186102973f0d7a07 344 PANTHER PTHR30477 5 280 1.7E-98 T 20-04-2016 APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 SMART SM00554 221 323 5.2E-15 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 SMART SM00554 69 177 1.2E-17 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 SUPERFAMILY SSF82153 177 323 3.4E-22 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 SUPERFAMILY SSF82153 35 177 1.57E-27 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 Gene3D G3DSA:2.30.180.10 177 322 4.9E-22 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 Gene3D G3DSA:2.30.180.10 35 174 4.1E-28 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 Pfam PF02469 Fasciclin domain 214 322 3.9E-19 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 Pfam PF02469 Fasciclin domain 45 173 8.6E-22 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04385 51b660136e0ff54eb963e0b83d65d25a 326 PANTHER PTHR10900 27 322 3.5E-48 T 20-04-2016 APS56_RS06755 ff815d337530324719df86190475c52c 561 TIGRFAM TIGR03524 GldJ: gliding motility-associated lipoprotein GldJ 2 559 2.1E-286 T 20-04-2016 IPR019865 Gliding motility-associated lipoprotein GldJ APS56_RS06755 ff815d337530324719df86190475c52c 561 PANTHER PTHR23150 37 181 1.1E-21 T 20-04-2016 APS56_RS06755 ff815d337530324719df86190475c52c 561 PANTHER PTHR23150 509 548 1.1E-21 T 20-04-2016 APS56_RS06755 ff815d337530324719df86190475c52c 561 PANTHER PTHR23150 262 391 1.1E-21 T 20-04-2016 APS56_RS06755 ff815d337530324719df86190475c52c 561 Pfam PF03781 Sulfatase-modifying factor enzyme 1 59 383 4.1E-37 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS06755 ff815d337530324719df86190475c52c 561 SUPERFAMILY SSF56436 58 178 4.55E-57 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS06755 ff815d337530324719df86190475c52c 561 SUPERFAMILY SSF56436 499 547 4.55E-57 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS06755 ff815d337530324719df86190475c52c 561 SUPERFAMILY SSF56436 261 373 4.55E-57 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS06755 ff815d337530324719df86190475c52c 561 Gene3D G3DSA:3.90.1580.10 47 178 2.1E-92 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS06755 ff815d337530324719df86190475c52c 561 Gene3D G3DSA:3.90.1580.10 261 379 2.1E-92 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS06755 ff815d337530324719df86190475c52c 561 Gene3D G3DSA:3.90.1580.10 505 558 2.1E-92 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PANTHER PTHR10906:SF2 4 448 1.1E-164 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 SUPERFAMILY SSF103491 2 429 4.45E-108 T 20-04-2016 IPR023201 SecY subunit domain APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 Pfam PF00344 SecY translocase 73 422 6.1E-105 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PANTHER PTHR10906 4 448 1.1E-164 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 20-04-2016 IPR030659 SecY conserved site APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 ProSitePatterns PS00755 Protein secY signature 1. 73 92 - T 20-04-2016 IPR030659 SecY conserved site APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PIRSF PIRSF004557 1 446 1.3E-114 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 Gene3D G3DSA:1.10.3370.10 4 442 1.1E-139 T 20-04-2016 IPR023201 SecY subunit domain APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 Hamap MF_01465 Protein translocase subunit SecY [secY]. 7 438 27.194 T 20-04-2016 IPR026593 Protein translocase subunit SecY APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 17 433 1.6E-109 T 20-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 136 1.1E-86 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 20 38 1.1E-86 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 407 425 1.1E-86 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 1.1E-86 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 72 92 1.1E-86 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.1E-86 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.1E-86 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.1E-86 T 20-04-2016 APS56_RS14045 47fabbdfc38dfa5861ed5b3be516acbc 448 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.1E-86 T 20-04-2016 APS56_RS04565 4261467f4efd8c67c66d82eb5bf47006 852 SUPERFAMILY SSF48208 249 683 5.26E-23 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS04565 4261467f4efd8c67c66d82eb5bf47006 852 Gene3D G3DSA:1.50.10.10 312 532 4.5E-8 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS04565 4261467f4efd8c67c66d82eb5bf47006 852 Pfam PF13287 Fn3 associated 800 845 4.6E-12 T 20-04-2016 IPR026876 Fn3 associated repeat APS56_RS00750 b4b4743e4b46510be8fee2596b03c892 895 Gene3D G3DSA:3.90.199.10 42 238 2.8E-59 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APS56_RS00750 b4b4743e4b46510be8fee2596b03c892 895 Gene3D G3DSA:3.90.199.10 318 370 2.8E-59 T 20-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APS56_RS00750 b4b4743e4b46510be8fee2596b03c892 895 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 43 457 1.1E-106 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00750 b4b4743e4b46510be8fee2596b03c892 895 PANTHER PTHR10169 29 639 2.8E-121 T 20-04-2016 APS56_RS00750 b4b4743e4b46510be8fee2596b03c892 895 PANTHER PTHR10169:SF48 29 639 2.8E-121 T 20-04-2016 APS56_RS00750 b4b4743e4b46510be8fee2596b03c892 895 SMART SM00434 22 456 2.3E-74 T 20-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS00750 b4b4743e4b46510be8fee2596b03c892 895 Gene3D G3DSA:3.30.1360.40 239 308 7.5E-13 T 20-04-2016 IPR024946 Arginine repressor C-terminal-like domain APS56_RS00750 b4b4743e4b46510be8fee2596b03c892 895 SUPERFAMILY SSF56719 22 475 2.35E-102 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APS56_RS02475 a8d0ef100330e06c9b3dec8129ec9bfc 414 Pfam PF13102 Phage integrase SAM-like domain 10 174 2.2E-25 T 20-04-2016 IPR025269 Phage integrase SAM-like domain APS56_RS02475 a8d0ef100330e06c9b3dec8129ec9bfc 414 SUPERFAMILY SSF56349 122 394 1.15E-42 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS02475 a8d0ef100330e06c9b3dec8129ec9bfc 414 Pfam PF00589 Phage integrase family 319 387 2.3E-13 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS02475 a8d0ef100330e06c9b3dec8129ec9bfc 414 PANTHER PTHR30349 40 402 6.2E-93 T 20-04-2016 APS56_RS02475 a8d0ef100330e06c9b3dec8129ec9bfc 414 PANTHER PTHR30349:SF26 40 402 6.2E-93 T 20-04-2016 APS56_RS02475 a8d0ef100330e06c9b3dec8129ec9bfc 414 Gene3D G3DSA:1.10.443.10 221 399 1.0E-29 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS05330 5c6cb717253d455b1d8dfca4bb615b5c 412 PANTHER PTHR12526:SF375 6 412 1.1E-44 T 20-04-2016 APS56_RS05330 5c6cb717253d455b1d8dfca4bb615b5c 412 Gene3D G3DSA:3.40.50.2000 226 386 4.3E-19 T 20-04-2016 APS56_RS05330 5c6cb717253d455b1d8dfca4bb615b5c 412 Pfam PF00534 Glycosyl transferases group 1 227 386 1.6E-30 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS05330 5c6cb717253d455b1d8dfca4bb615b5c 412 PANTHER PTHR12526 6 412 1.1E-44 T 20-04-2016 APS56_RS05330 5c6cb717253d455b1d8dfca4bb615b5c 412 Pfam PF13439 Glycosyltransferase Family 4 88 212 1.3E-6 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS05330 5c6cb717253d455b1d8dfca4bb615b5c 412 SUPERFAMILY SSF53756 19 411 2.2E-60 T 20-04-2016 APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 4.1E-11 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 Gene3D G3DSA:3.40.50.2300 263 329 4.3E-7 T 20-04-2016 APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 Pfam PF13377 Periplasmic binding protein-like domain 229 334 3.0E-6 T 20-04-2016 APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 PANTHER PTHR38445:SF1 1 300 4.0E-15 T 20-04-2016 APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 SMART SM00345 21 80 2.2E-12 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 Gene3D G3DSA:1.10.10.10 7 81 1.7E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 SUPERFAMILY SSF46785 10 84 2.72E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 SUPERFAMILY SSF53822 118 345 4.5E-16 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS00630 7bc8c0fae7595622a2d7bd6bc4f72a2b 346 PANTHER PTHR38445 1 300 4.0E-15 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815 299 523 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815:SF13 592 635 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815:SF13 656 807 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815 656 807 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815 112 257 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815:SF13 561 576 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815:SF13 112 257 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815 561 576 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815 592 635 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 PANTHER PTHR12815:SF13 299 523 5.1E-54 T 20-04-2016 APS56_RS14325 7351698b6c39da6acd4dc7bef43d25cd 840 Pfam PF01103 Surface antigen 514 821 7.5E-18 T 20-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 514 3.0E-41 T 20-04-2016 IPR032090 Peptide chain release factor 3, C-terminal APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PANTHER PTHR23115 248 465 2.6E-221 T 20-04-2016 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PANTHER PTHR23115 1 181 2.6E-221 T 20-04-2016 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 SUPERFAMILY SSF52540 6 274 2.82E-85 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 SUPERFAMILY SSF50447 258 390 2.99E-25 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.0E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.0E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.0E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.0E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.0E-12 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 Gene3D G3DSA:2.40.30.10 289 391 2.8E-19 T 20-04-2016 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 526 4.0E-203 T 20-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 Gene3D G3DSA:3.40.50.300 6 279 1.4E-68 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 Pfam PF00009 Elongation factor Tu GTP binding domain 9 274 6.0E-52 T 20-04-2016 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 SUPERFAMILY SSF54980 390 465 1.33E-13 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 150 2.3E-27 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 526 49.881 T 20-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 Gene3D G3DSA:3.30.70.870 392 460 6.3E-8 T 20-04-2016 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PANTHER PTHR23115:SF69 248 465 2.6E-221 T 20-04-2016 APS56_RS05515 d48e36057e38786e2f3d479b2fea7d23 528 PANTHER PTHR23115:SF69 1 181 2.6E-221 T 20-04-2016 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 SUPERFAMILY SSF56425 261 431 5.93E-28 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 36 378 1.5E-174 T 20-04-2016 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|UniPathway: UPA00223 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 Gene3D G3DSA:3.90.700.10 267 424 6.6E-15 T 20-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 Pfam PF02910 Fumarate reductase flavoprotein C-term 531 669 3.6E-35 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 Gene3D G3DSA:3.50.50.60 25 266 9.0E-76 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 Gene3D G3DSA:3.50.50.60 426 478 9.0E-76 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 SUPERFAMILY SSF51905 29 277 3.86E-49 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 SUPERFAMILY SSF51905 434 485 3.86E-49 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 433 455 4.0E-6 T 20-04-2016 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 36 55 4.0E-6 T 20-04-2016 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 Gene3D G3DSA:1.20.58.100 503 621 1.5E-30 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 SUPERFAMILY SSF46977 522 669 2.62E-36 T 20-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 PANTHER PTHR11632:SF53 3 670 0.0 T 20-04-2016 APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 Pfam PF00890 FAD binding domain 35 469 1.2E-57 T 20-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APS56_RS11740 297117db2ef80be59c4d374729c4afe1 670 PANTHER PTHR11632 3 670 0.0 T 20-04-2016 APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 Gene3D G3DSA:3.40.50.720 3 257 2.3E-62 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 2.8E-42 T 20-04-2016 APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 SUPERFAMILY SSF51735 7 256 7.72E-64 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-25 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-25 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.1E-25 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-25 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-25 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-25 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 PANTHER PTHR24319 1 260 4.8E-57 T 20-04-2016 APS56_RS14270 b4d4b770dd201ee5bd894fe49bdb2e72 260 PANTHER PTHR24319:SF23 1 260 4.8E-57 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 706 992 2.8E-45 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 940 956 1.1E-15 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 707 726 1.1E-15 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 965 987 1.1E-15 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 802 820 1.1E-15 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 853 871 1.1E-15 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 SMART SM00926 3 57 5.8E-16 T 20-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 706 728 2.6E-9 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 941 955 2.6E-9 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 853 878 2.6E-9 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 980 987 2.6E-9 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 8 26 - T 20-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 5 56 5.5E-17 T 20-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Gene3D G3DSA:3.50.50.60 706 807 2.5E-19 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Pfam PF00384 Molybdopterin oxidoreductase 61 490 9.1E-89 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PANTHER PTHR11615 4 717 2.2E-227 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Gene3D G3DSA:2.40.40.20 533 699 3.2E-47 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 PANTHER PTHR11615:SF119 4 717 2.2E-227 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 SUPERFAMILY SSF50692 534 700 7.91E-40 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 SUPERFAMILY SSF51905 706 897 1.99E-33 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Gene3D G3DSA:3.40.228.10 137 318 8.8E-64 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 SUPERFAMILY SSF53706 5 564 5.1E-196 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Gene3D G3DSA:2.20.25.90 4 57 2.5E-18 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Gene3D G3DSA:3.50.50.60 808 1013 1.1E-40 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Gene3D G3DSA:3.40.50.740 319 341 1.4E-77 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Gene3D G3DSA:3.40.50.740 61 135 1.4E-77 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Gene3D G3DSA:3.40.50.740 375 531 1.4E-77 T 20-04-2016 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Pfam PF04324 BFD-like [2Fe-2S] binding domain 1119 1167 1.7E-9 T 20-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 Pfam PF01568 Molydopterin dinucleotide binding domain 582 693 1.9E-30 T 20-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APS56_RS00930 363e9e9965a9aef4eb8eaf0ca7b51d22 1173 SUPERFAMILY SSF51905 843 1014 1.57E-27 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS13520 fe09338cd811a4864fb2050f5b123eeb 349 Pfam PF04245 37-kD nucleoid-associated bacterial protein 13 333 1.4E-35 T 20-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 Gene3D G3DSA:2.160.20.10 49 457 4.6E-112 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 Pfam PF00295 Glycosyl hydrolases family 28 218 457 2.9E-32 T 20-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 ProSitePatterns PS00502 Polygalacturonase active site. 318 332 - T 20-04-2016 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 Pfam PF12708 Pectate lyase superfamily protein 55 113 1.1E-10 T 20-04-2016 IPR024535 Pectate lyase superfamily protein APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 PANTHER PTHR31339 54 172 1.6E-115 T 20-04-2016 APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 PANTHER PTHR31339 208 449 1.6E-115 T 20-04-2016 APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 SMART SM00710 338 361 2100.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 SMART SM00710 311 332 1.8 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 SMART SM00710 435 456 440.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 SMART SM00710 407 429 6.4 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 SMART SM00710 277 298 1.5 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 SUPERFAMILY SSF51126 7 14 5.99E-95 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 SUPERFAMILY SSF51126 47 463 5.99E-95 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 PANTHER PTHR31339:SF0 54 172 1.6E-115 T 20-04-2016 APS56_RS12660 83e0e926b949e1388dbf022d4788a3eb 472 PANTHER PTHR31339:SF0 208 449 1.6E-115 T 20-04-2016 APS56_RS05405 20e6e5331499bd147878faf652218dbe 817 SUPERFAMILY SSF52540 599 777 8.09E-34 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05405 20e6e5331499bd147878faf652218dbe 817 Gene3D G3DSA:3.40.50.300 599 776 7.0E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05405 20e6e5331499bd147878faf652218dbe 817 PANTHER PTHR32309:SF13 197 794 1.2E-109 T 20-04-2016 APS56_RS05405 20e6e5331499bd147878faf652218dbe 817 PANTHER PTHR32309:SF13 20 121 1.2E-109 T 20-04-2016 APS56_RS05405 20e6e5331499bd147878faf652218dbe 817 Pfam PF13614 AAA domain 599 759 9.0E-12 T 20-04-2016 IPR025669 AAA domain APS56_RS05405 20e6e5331499bd147878faf652218dbe 817 PANTHER PTHR32309 197 794 1.2E-109 T 20-04-2016 APS56_RS05405 20e6e5331499bd147878faf652218dbe 817 PANTHER PTHR32309 20 121 1.2E-109 T 20-04-2016 APS56_RS05405 20e6e5331499bd147878faf652218dbe 817 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 578 784 8.4E-48 T 20-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 APS56_RS14690 b1a3efb6430d5f21a1cff38907151c77 389 Pfam PF12698 ABC-2 family transporter protein 22 371 3.5E-23 T 20-04-2016 APS56_RS14690 b1a3efb6430d5f21a1cff38907151c77 389 PANTHER PTHR30294 1 389 2.1E-37 T 20-04-2016 APS56_RS14690 b1a3efb6430d5f21a1cff38907151c77 389 PANTHER PTHR30294:SF12 1 389 2.1E-37 T 20-04-2016 APS56_RS03450 e8af122bad6af968ca2d74da9a400dbb 329 SUPERFAMILY SSF46626 1 131 1.19E-11 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS03450 e8af122bad6af968ca2d74da9a400dbb 329 Pfam PF11845 Protein of unknown function (DUF3365) 194 327 1.7E-21 T 20-04-2016 IPR021796 Protein of unknown function DUF3365 APS56_RS03450 e8af122bad6af968ca2d74da9a400dbb 329 Gene3D G3DSA:3.90.10.10 17 46 8.9E-4 T 20-04-2016 APS56_RS03450 e8af122bad6af968ca2d74da9a400dbb 329 Gene3D G3DSA:3.90.10.10 283 291 8.9E-4 T 20-04-2016 APS56_RS03450 e8af122bad6af968ca2d74da9a400dbb 329 Gene3D G3DSA:1.10.760.10 47 127 7.0E-8 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 PANTHER PTHR12654 40 593 1.5E-63 T 20-04-2016 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 PANTHER PTHR12654 695 842 1.5E-63 T 20-04-2016 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 PANTHER PTHR12654 623 679 1.5E-63 T 20-04-2016 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 PANTHER PTHR12654:SF0 40 593 1.5E-63 T 20-04-2016 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 PANTHER PTHR12654:SF0 695 842 1.5E-63 T 20-04-2016 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 PANTHER PTHR12654:SF0 623 679 1.5E-63 T 20-04-2016 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 Pfam PF12215 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 42 356 3.7E-57 T 20-04-2016 IPR024462 Glycosyl-hydrolase family 116, N-terminal KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 SUPERFAMILY SSF48208 483 595 2.55E-22 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 SUPERFAMILY SSF48208 624 792 2.55E-22 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS09795 3c0542fafec19f688148b2b22511c47c 849 Pfam PF04685 Glycosyl-hydrolase family 116, catalytic region 476 766 2.2E-39 T 20-04-2016 IPR006775 Glycosyl-hydrolase family 116, catalytic region GO:0004553 KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45 APS56_RS03820 152a4ff3a78faeb54bcfa55735e43b37 349 Pfam PF01758 Sodium Bile acid symporter family 51 247 2.1E-63 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APS56_RS03820 152a4ff3a78faeb54bcfa55735e43b37 349 PIRSF PIRSF005508 1 348 2.3E-132 T 20-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APS56_RS03820 152a4ff3a78faeb54bcfa55735e43b37 349 PANTHER PTHR10361:SF31 2 343 5.0E-146 T 20-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APS56_RS03820 152a4ff3a78faeb54bcfa55735e43b37 349 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 6 334 1.2E-132 T 20-04-2016 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 APS56_RS03820 152a4ff3a78faeb54bcfa55735e43b37 349 PANTHER PTHR10361 2 343 5.0E-146 T 20-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APS56_RS00530 34336afc1a13e1ae15639cf75a380796 346 PANTHER PTHR10584:SF203 1 336 1.8E-95 T 20-04-2016 APS56_RS00530 34336afc1a13e1ae15639cf75a380796 346 PANTHER PTHR10584 1 336 1.8E-95 T 20-04-2016 APS56_RS00530 34336afc1a13e1ae15639cf75a380796 346 SUPERFAMILY SSF53613 1 336 2.29E-72 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS00530 34336afc1a13e1ae15639cf75a380796 346 Gene3D G3DSA:3.40.1190.20 1 339 1.2E-80 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS00530 34336afc1a13e1ae15639cf75a380796 346 Pfam PF00294 pfkB family carbohydrate kinase 1 323 6.3E-30 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 236 2.4E-27 T 20-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 Gene3D G3DSA:3.40.50.1000 1 72 9.6E-44 T 20-04-2016 IPR023214 HAD-like domain APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 Gene3D G3DSA:3.40.50.1000 181 267 9.6E-44 T 20-04-2016 IPR023214 HAD-like domain APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 SUPERFAMILY SSF56784 1 267 8.87E-59 T 20-04-2016 IPR023214 HAD-like domain APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 PANTHER PTHR10000:SF8 1 268 4.5E-51 T 20-04-2016 APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 PANTHER PTHR10000 1 268 4.5E-51 T 20-04-2016 APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 263 1.3E-52 T 20-04-2016 IPR000150 Cof protein GO:0016787 APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 263 6.8E-60 T 20-04-2016 IPR023214 HAD-like domain APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 Gene3D G3DSA:3.30.1240.10 82 180 7.4E-18 T 20-04-2016 APS56_RS03995 a1e7dbe51f0a273a0d63ebfa4f4af604 268 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 20-04-2016 IPR000150 Cof protein GO:0016787 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 SMART SM00342 155 238 5.1E-25 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 Gene3D G3DSA:1.10.10.60 192 238 9.1E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 Gene3D G3DSA:1.10.10.60 138 191 9.8E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 Pfam PF08448 PAS fold 21 128 4.1E-9 T 20-04-2016 IPR013656 PAS fold-4 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 Gene3D G3DSA:3.30.450.20 15 125 7.7E-12 T 20-04-2016 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 SUPERFAMILY SSF46689 139 189 2.63E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 PANTHER PTHR11019 143 237 3.5E-24 T 20-04-2016 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 Pfam PF12833 Helix-turn-helix domain 161 238 1.8E-21 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 192 234 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 SUPERFAMILY SSF55785 14 124 1.57E-10 T 20-04-2016 IPR000014 PAS domain APS56_RS09535 a787587ad0a3adcfa47190c88600f383 243 SUPERFAMILY SSF46689 191 238 1.03E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS05780 5aa7e3ea564bc9be45fc252f0947a72c 434 PANTHER PTHR30250:SF9 3 420 1.2E-36 T 20-04-2016 APS56_RS05780 5aa7e3ea564bc9be45fc252f0947a72c 434 PANTHER PTHR30250 3 420 1.2E-36 T 20-04-2016 APS56_RS05780 5aa7e3ea564bc9be45fc252f0947a72c 434 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 129 242 4.3E-9 T 20-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain APS56_RS03695 76c44cedeb1838c215727a73c6645eba 296 Gene3D G3DSA:3.90.260.10 183 256 6.1E-14 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS03695 76c44cedeb1838c215727a73c6645eba 296 PANTHER PTHR33490:SF6 4 294 1.4E-68 T 20-04-2016 APS56_RS03695 76c44cedeb1838c215727a73c6645eba 296 Pfam PF01841 Transglutaminase-like superfamily 146 249 5.3E-22 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS03695 76c44cedeb1838c215727a73c6645eba 296 SUPERFAMILY SSF54001 7 277 4.07E-43 T 20-04-2016 APS56_RS03695 76c44cedeb1838c215727a73c6645eba 296 PANTHER PTHR33490 4 294 1.4E-68 T 20-04-2016 APS56_RS03695 76c44cedeb1838c215727a73c6645eba 296 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 4 81 1.5E-20 T 20-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal APS56_RS03695 76c44cedeb1838c215727a73c6645eba 296 SMART SM00460 181 251 2.4E-19 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS08795 dae374eb19a07c4a18f9225691346d73 371 Pfam PF00534 Glycosyl transferases group 1 193 311 1.7E-25 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS08795 dae374eb19a07c4a18f9225691346d73 371 SUPERFAMILY SSF53756 19 369 8.9E-53 T 20-04-2016 APS56_RS08795 dae374eb19a07c4a18f9225691346d73 371 PANTHER PTHR12526 31 371 7.5E-36 T 20-04-2016 APS56_RS08795 dae374eb19a07c4a18f9225691346d73 371 Gene3D G3DSA:3.40.50.2000 193 340 2.6E-17 T 20-04-2016 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 PANTHER PTHR10937:SF0 1 615 0.0 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 Gene3D G3DSA:3.40.50.10490 248 449 2.5E-78 T 20-04-2016 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 615 39.727 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 PANTHER PTHR10937 1 615 0.0 T 20-04-2016 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 Pfam PF01380 SIS domain 469 597 7.7E-28 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 Pfam PF01380 SIS domain 296 423 4.2E-32 T 20-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 Pfam PF13522 Glutamine amidotransferase domain 65 196 1.1E-24 T 20-04-2016 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 Gene3D G3DSA:3.60.20.10 2 233 5.9E-75 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 Gene3D G3DSA:3.40.50.10490 450 615 3.7E-65 T 20-04-2016 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 SUPERFAMILY SSF53697 250 615 1.11E-117 T 20-04-2016 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 615 3.4E-245 T 20-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APS56_RS12040 4e6c8b482c8fecd70e9987cbbd9afe24 615 SUPERFAMILY SSF56235 2 227 1.54E-67 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS14515 64eb8e231b66fc9a37a502d99e4d4c9c 244 PANTHER PTHR36438 3 242 5.7E-89 T 20-04-2016 APS56_RS14515 64eb8e231b66fc9a37a502d99e4d4c9c 244 Pfam PF04405 Domain of Unknown function (DUF542) 9 62 1.1E-21 T 20-04-2016 IPR019903 Repair of iron centres family APS56_RS14515 64eb8e231b66fc9a37a502d99e4d4c9c 244 Pfam PF01814 Hemerythrin HHE cation binding domain 83 235 6.4E-22 T 20-04-2016 IPR012312 Haemerythrin-like APS56_RS14515 64eb8e231b66fc9a37a502d99e4d4c9c 244 PANTHER PTHR36438:SF1 3 242 5.7E-89 T 20-04-2016 APS56_RS14515 64eb8e231b66fc9a37a502d99e4d4c9c 244 Gene3D G3DSA:1.20.120.520 87 237 3.1E-23 T 20-04-2016 APS56_RS14515 64eb8e231b66fc9a37a502d99e4d4c9c 244 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 12 235 3.8E-75 T 20-04-2016 IPR019903 Repair of iron centres family APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 SUPERFAMILY SSF48208 622 764 2.99E-19 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 SUPERFAMILY SSF48208 479 593 2.99E-19 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 Pfam PF12215 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 40 351 1.3E-59 T 20-04-2016 IPR024462 Glycosyl-hydrolase family 116, N-terminal KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 Pfam PF04685 Glycosyl-hydrolase family 116, catalytic region 474 763 4.6E-34 T 20-04-2016 IPR006775 Glycosyl-hydrolase family 116, catalytic region GO:0004553 KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 PANTHER PTHR12654:SF0 1 591 2.9E-54 T 20-04-2016 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 PANTHER PTHR12654:SF0 621 677 2.9E-54 T 20-04-2016 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 PANTHER PTHR12654:SF0 693 783 2.9E-54 T 20-04-2016 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 PANTHER PTHR12654 1 591 2.9E-54 T 20-04-2016 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 PANTHER PTHR12654 621 677 2.9E-54 T 20-04-2016 APS56_RS09805 9b0e510845ea5439bd13167be683600f 847 PANTHER PTHR12654 693 783 2.9E-54 T 20-04-2016 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Pfam PF00703 Glycosyl hydrolases family 2 248 349 7.9E-13 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 SUPERFAMILY SSF49303 247 349 2.13E-18 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Gene3D G3DSA:2.60.40.320 642 744 8.7E-30 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 SUPERFAMILY SSF74650 756 1043 1.27E-84 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 351 646 3.7E-96 T 20-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Gene3D G3DSA:2.60.40.320 233 349 1.7E-24 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Pfam PF02929 Beta galactosidase small chain 770 1042 1.2E-73 T 20-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PANTHER PTHR10066 611 1048 0.0 T 20-04-2016 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PANTHER PTHR10066 457 591 0.0 T 20-04-2016 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PANTHER PTHR10066 36 437 0.0 T 20-04-2016 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 SUPERFAMILY SSF49785 35 244 1.4E-60 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Gene3D G3DSA:2.60.120.260 30 232 7.4E-73 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 76 242 2.5E-41 T 20-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PANTHER PTHR10066:SF72 611 1048 0.0 T 20-04-2016 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PANTHER PTHR10066:SF72 457 591 0.0 T 20-04-2016 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PANTHER PTHR10066:SF72 36 437 0.0 T 20-04-2016 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 475 490 5.0E-32 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 546 561 5.0E-32 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 391 409 5.0E-32 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 172 187 5.0E-32 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 PRINTS PR00132 Glycosyl hydrolase family 2 signature 360 374 5.0E-32 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 SUPERFAMILY SSF49303 638 745 2.01E-25 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Gene3D G3DSA:3.20.20.80 351 641 1.2E-94 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Pfam PF16353 Domain of unknown function(DUF4981) 656 743 1.3E-21 T 20-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 401 426 - T 20-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 SMART SM01038 768 1043 4.1E-118 T 20-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 Gene3D G3DSA:2.70.98.10 754 1043 2.1E-86 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS15540 e941e774ea04ca7fc96b84940a3b25a4 1049 SUPERFAMILY SSF51445 351 642 3.52E-88 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS11840 917c904bb5e75615f26d145c16288889 140 Gene3D G3DSA:3.90.1010.10 3 137 1.3E-52 T 20-04-2016 APS56_RS11840 917c904bb5e75615f26d145c16288889 140 SUPERFAMILY SSF82649 7 136 7.85E-45 T 20-04-2016 APS56_RS11840 917c904bb5e75615f26d145c16288889 140 PANTHER PTHR12735:SF11 1 137 3.4E-46 T 20-04-2016 APS56_RS11840 917c904bb5e75615f26d145c16288889 140 Pfam PF02657 Fe-S metabolism associated domain 11 130 5.9E-47 T 20-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 APS56_RS11840 917c904bb5e75615f26d145c16288889 140 PANTHER PTHR12735 1 137 3.4E-46 T 20-04-2016 APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 Gene3D G3DSA:3.40.225.10 29 230 7.1E-34 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 27 698 4.0E-283 T 20-04-2016 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 448 692 6.1E-43 T 20-04-2016 APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 Gene3D G3DSA:3.40.50.720 430 692 4.4E-58 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 SUPERFAMILY SSF51735 430 694 7.22E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 SUPERFAMILY SSF53639 28 229 3.73E-27 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 34 228 5.2E-19 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 PANTHER PTHR24322 589 620 1.1E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 PANTHER PTHR24322 446 572 1.1E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 610 627 3.8E-17 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 563 579 3.8E-17 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 443 460 3.8E-17 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 589 608 3.8E-17 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 515 526 3.8E-17 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00635 423eca247e38fb2c4b9a44cc686fa908 698 SMART SM01007 27 229 2.9E-26 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS04365 0cc7e5a1c22f8f96f1b79eb2656b7393 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 19 428 3.3E-91 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS04365 0cc7e5a1c22f8f96f1b79eb2656b7393 459 PANTHER PTHR11206:SF153 4 446 1.8E-110 T 20-04-2016 APS56_RS04365 0cc7e5a1c22f8f96f1b79eb2656b7393 459 PANTHER PTHR11206 4 446 1.8E-110 T 20-04-2016 APS56_RS04365 0cc7e5a1c22f8f96f1b79eb2656b7393 459 PIRSF PIRSF006603 11 456 2.0E-78 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS04365 0cc7e5a1c22f8f96f1b79eb2656b7393 459 Pfam PF01554 MatE 19 178 1.1E-33 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS04365 0cc7e5a1c22f8f96f1b79eb2656b7393 459 Pfam PF01554 MatE 245 414 1.6E-25 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 PANTHER PTHR22604:SF2 35 209 3.2E-90 T 20-04-2016 APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 PANTHER PTHR22604:SF2 288 441 3.2E-90 T 20-04-2016 APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 PANTHER PTHR22604:SF2 225 269 3.2E-90 T 20-04-2016 APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 Gene3D G3DSA:3.40.50.720 33 178 8.9E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 37 162 6.9E-10 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 Gene3D G3DSA:3.30.360.10 179 414 4.5E-5 T 20-04-2016 APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 SUPERFAMILY SSF51735 31 196 7.02E-32 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 PANTHER PTHR22604 35 209 3.2E-90 T 20-04-2016 APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 PANTHER PTHR22604 288 441 3.2E-90 T 20-04-2016 APS56_RS14615 ebf3db8d92530450d40179f39ad6877d 452 PANTHER PTHR22604 225 269 3.2E-90 T 20-04-2016 APS56_RS14265 41293a1278bd798eb28282128d9019b8 177 TIGRFAM TIGR03037 anthran_nbaC: 3-hydroxyanthranilate 3,4-dioxygenase 8 166 2.3E-74 T 20-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 APS56_RS14265 41293a1278bd798eb28282128d9019b8 177 Gene3D G3DSA:2.60.120.10 6 114 2.2E-21 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS14265 41293a1278bd798eb28282128d9019b8 177 Hamap MF_00825 3-hydroxyanthranilate 3,4-dioxygenase [nbaC]. 4 171 36.834 T 20-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 APS56_RS14265 41293a1278bd798eb28282128d9019b8 177 Pfam PF06052 3-hydroxyanthranilic acid dioxygenase 5 153 1.8E-62 T 20-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 APS56_RS14265 41293a1278bd798eb28282128d9019b8 177 SUPERFAMILY SSF51182 5 171 1.67E-54 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS14265 41293a1278bd798eb28282128d9019b8 177 PANTHER PTHR15497 4 168 6.7E-83 T 20-04-2016 IPR010329 3-hydroxyanthranilic acid dioxygenase GO:0000334|GO:0005506|GO:0055114 KEGG: 00380+1.13.11.6|MetaCyc: PWY-5647|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-6505|UniPathway: UPA00253 APS56_RS03510 d33274f60eac85b7b25575d56d01d59a 433 Pfam PF07690 Major Facilitator Superfamily 39 395 3.4E-28 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS03510 d33274f60eac85b7b25575d56d01d59a 433 Gene3D G3DSA:1.20.1250.20 252 431 1.8E-13 T 20-04-2016 APS56_RS03510 d33274f60eac85b7b25575d56d01d59a 433 Gene3D G3DSA:1.20.1250.20 38 220 1.1E-15 T 20-04-2016 APS56_RS03510 d33274f60eac85b7b25575d56d01d59a 433 PANTHER PTHR11360 19 421 2.7E-30 T 20-04-2016 APS56_RS03510 d33274f60eac85b7b25575d56d01d59a 433 SUPERFAMILY SSF103473 19 429 1.57E-42 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS02580 cca1b5dc5540f9093f853d9b3190c3da 118 SUPERFAMILY SSF159888 7 116 3.79E-22 T 20-04-2016 APS56_RS02580 cca1b5dc5540f9093f853d9b3190c3da 118 Pfam PF08818 Domain of unknown function (DU1801) 22 111 7.4E-13 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 APS56_RS02580 cca1b5dc5540f9093f853d9b3190c3da 118 PANTHER PTHR41327 1 117 4.9E-12 T 20-04-2016 APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 Gene3D G3DSA:2.60.40.1120 20 93 6.3E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 217 1.7E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 Gene3D G3DSA:2.170.130.10 96 221 4.2E-30 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 SUPERFAMILY SSF49464 19 94 1.16E-15 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 SUPERFAMILY SSF56935 100 689 7.69E-80 T 20-04-2016 APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 SUPERFAMILY SSF56935 726 745 7.69E-80 T 20-04-2016 APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 Gene3D G3DSA:2.40.170.20 222 745 3.4E-59 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 Pfam PF13715 CarboxypepD_reg-like domain 20 103 9.8E-21 T 20-04-2016 APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 PANTHER PTHR30069:SF2 3 661 3.2E-47 T 20-04-2016 APS56_RS10205 9fc1348097a448b158c5d919e56ea129 747 PANTHER PTHR30069 3 661 3.2E-47 T 20-04-2016 APS56_RS06435 bbcad9e1a664c4f00aa386bdd20a00f7 229 Gene3D G3DSA:3.40.50.1110 49 227 1.8E-51 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS06435 bbcad9e1a664c4f00aa386bdd20a00f7 229 PANTHER PTHR30383 50 228 9.3E-41 T 20-04-2016 APS56_RS06435 bbcad9e1a664c4f00aa386bdd20a00f7 229 SUPERFAMILY SSF52266 50 227 7.33E-46 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS06435 bbcad9e1a664c4f00aa386bdd20a00f7 229 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 50 60 - T 20-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 APS56_RS06435 bbcad9e1a664c4f00aa386bdd20a00f7 229 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 52 215 2.8E-24 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS13070 8bd6e64efd6c23af2f38ae62676bcf2d 376 Gene3D G3DSA:1.20.1600.10 100 162 1.2E-4 T 20-04-2016 APS56_RS13070 8bd6e64efd6c23af2f38ae62676bcf2d 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 259 1.0E-16 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APS56_RS13070 8bd6e64efd6c23af2f38ae62676bcf2d 376 SUPERFAMILY SSF111369 51 268 5.89E-18 T 20-04-2016 APS56_RS13070 8bd6e64efd6c23af2f38ae62676bcf2d 376 PANTHER PTHR32347:SF12 7 356 5.2E-41 T 20-04-2016 APS56_RS13070 8bd6e64efd6c23af2f38ae62676bcf2d 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 356 3.9E-42 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APS56_RS13070 8bd6e64efd6c23af2f38ae62676bcf2d 376 Gene3D G3DSA:2.40.50.100 60 93 9.2E-14 T 20-04-2016 APS56_RS13070 8bd6e64efd6c23af2f38ae62676bcf2d 376 Gene3D G3DSA:2.40.50.100 174 200 9.2E-14 T 20-04-2016 APS56_RS13070 8bd6e64efd6c23af2f38ae62676bcf2d 376 PANTHER PTHR32347 7 356 5.2E-41 T 20-04-2016 APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 PRINTS PR00421 Thioredoxin family signature 29 38 2.4E-8 T 20-04-2016 APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 PRINTS PR00421 Thioredoxin family signature 69 80 2.4E-8 T 20-04-2016 APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 PRINTS PR00421 Thioredoxin family signature 21 29 2.4E-8 T 20-04-2016 APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 Pfam PF00085 Thioredoxin 4 101 5.2E-31 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 Gene3D G3DSA:3.40.30.10 3 103 1.1E-38 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 PIRSF PIRSF000077 1 105 4.9E-41 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 SUPERFAMILY SSF52833 3 105 6.41E-41 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 PANTHER PTHR10438 1 105 3.3E-40 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APS56_RS12605 21f86b2e286077b2a53d184de7f52e26 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 102 6.5E-39 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 Gene3D G3DSA:3.40.50.10750 507 666 7.0E-64 T 20-04-2016 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 SUPERFAMILY SSF52540 1 217 7.44E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 387 690 6.3E-123 T 20-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 PIRSF PIRSF006107 1 696 2.9E-176 T 20-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 PANTHER PTHR23406:SF3 158 696 6.0E-52 T 20-04-2016 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 Pfam PF01515 Phosphate acetyl/butaryl transferase 371 690 4.1E-127 T 20-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 Pfam PF13500 AAA domain 4 208 6.6E-33 T 20-04-2016 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 PANTHER PTHR23406 158 696 6.0E-52 T 20-04-2016 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 Gene3D G3DSA:3.40.50.300 3 211 3.3E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 SUPERFAMILY SSF75138 209 332 2.22E-27 T 20-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 Pfam PF07085 DRTGG domain 214 325 6.1E-30 T 20-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 Gene3D G3DSA:3.40.1390.20 212 347 1.7E-34 T 20-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APS56_RS07335 49ad43ff1c37ef623d09882dc7ee47d3 696 SUPERFAMILY SSF53659 372 693 2.01E-96 T 20-04-2016 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 PANTHER PTHR10066:SF46 455 664 7.3E-127 T 20-04-2016 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 PANTHER PTHR10066:SF46 4 434 7.3E-127 T 20-04-2016 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 Gene3D G3DSA:2.60.40.320 167 300 3.6E-25 T 20-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 Gene3D G3DSA:2.60.40.1560 620 692 2.9E-5 T 20-04-2016 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 SUPERFAMILY SSF49785 13 176 2.31E-40 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 Pfam PF11721 Di-glucose binding within endoplasmic reticulum 723 889 1.4E-13 T 20-04-2016 IPR021720 Malectin APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 PANTHER PTHR10066 455 664 7.3E-127 T 20-04-2016 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 PANTHER PTHR10066 4 434 7.3E-127 T 20-04-2016 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 SUPERFAMILY SSF51445 304 614 6.24E-64 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 307 610 1.6E-29 T 20-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 Gene3D G3DSA:3.20.20.80 304 613 6.1E-66 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 26 175 6.4E-21 T 20-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 Pfam PF00703 Glycosyl hydrolases family 2 196 299 2.8E-17 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 SUPERFAMILY SSF49303 192 299 1.93E-16 T 20-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 Gene3D G3DSA:2.60.120.260 15 166 6.1E-39 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 PRINTS PR00132 Glycosyl hydrolase family 2 signature 104 119 1.7E-13 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 PRINTS PR00132 Glycosyl hydrolase family 2 signature 311 325 1.7E-13 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 PRINTS PR00132 Glycosyl hydrolase family 2 signature 407 422 1.7E-13 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS09865 09c636fac518e7bdf30350c8ff9c85bd 896 PRINTS PR00132 Glycosyl hydrolase family 2 signature 342 360 1.7E-13 T 20-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS14680 b87d452fd1f3885a4ddd23a990f00f51 457 Gene3D G3DSA:1.20.1600.10 126 453 1.1E-38 T 20-04-2016 APS56_RS14680 b87d452fd1f3885a4ddd23a990f00f51 457 Gene3D G3DSA:1.20.1600.10 26 91 1.1E-38 T 20-04-2016 APS56_RS14680 b87d452fd1f3885a4ddd23a990f00f51 457 PANTHER PTHR30026 11 455 1.3E-25 T 20-04-2016 APS56_RS14680 b87d452fd1f3885a4ddd23a990f00f51 457 SUPERFAMILY SSF56954 11 83 3.27E-50 T 20-04-2016 APS56_RS14680 b87d452fd1f3885a4ddd23a990f00f51 457 SUPERFAMILY SSF56954 126 455 3.27E-50 T 20-04-2016 APS56_RS14680 b87d452fd1f3885a4ddd23a990f00f51 457 Pfam PF02321 Outer membrane efflux protein 279 448 3.4E-22 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS14680 b87d452fd1f3885a4ddd23a990f00f51 457 Pfam PF02321 Outer membrane efflux protein 32 239 1.9E-13 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS00730 ce35583e4a254ea2078bda17f13a3c4f 151 SUPERFAMILY SSF55961 1 144 2.89E-19 T 20-04-2016 APS56_RS10300 e6936e5952a56696030d00c41a870d2a 339 PIRSF PIRSF028757 36 338 1.3E-93 T 20-04-2016 IPR003507 Peptidase family S66 APS56_RS10300 e6936e5952a56696030d00c41a870d2a 339 Pfam PF02016 LD-carboxypeptidase 48 325 1.3E-80 T 20-04-2016 IPR003507 Peptidase family S66 APS56_RS10300 e6936e5952a56696030d00c41a870d2a 339 SUPERFAMILY SSF52317 36 198 4.44E-50 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS10300 e6936e5952a56696030d00c41a870d2a 339 Gene3D G3DSA:3.40.50.10740 34 198 2.9E-53 T 20-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain APS56_RS10300 e6936e5952a56696030d00c41a870d2a 339 PANTHER PTHR30237:SF2 36 326 1.4E-91 T 20-04-2016 APS56_RS10300 e6936e5952a56696030d00c41a870d2a 339 PANTHER PTHR30237 36 326 1.4E-91 T 20-04-2016 APS56_RS10300 e6936e5952a56696030d00c41a870d2a 339 SUPERFAMILY SSF141986 181 330 7.06E-39 T 20-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain APS56_RS10300 e6936e5952a56696030d00c41a870d2a 339 Gene3D G3DSA:3.50.30.60 202 331 1.3E-38 T 20-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain APS56_RS11205 0bad4e5544f67106917392ead86dfc77 153 Gene3D G3DSA:3.10.50.30 115 142 5.6E-4 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APS56_RS10560 e637e6c64965c5a77496e5bca9e5c732 414 PANTHER PTHR30217 1 413 3.4E-136 T 20-04-2016 APS56_RS10560 e637e6c64965c5a77496e5bca9e5c732 414 Pfam PF01136 Peptidase family U32 79 310 9.6E-77 T 20-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS10560 e637e6c64965c5a77496e5bca9e5c732 414 ProSitePatterns PS01276 Peptidase family U32 signature. 170 188 - T 20-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS10560 e637e6c64965c5a77496e5bca9e5c732 414 PANTHER PTHR30217:SF6 1 413 3.4E-136 T 20-04-2016 APS56_RS10180 a097f09fe873c39a0b62790756159894 224 PANTHER PTHR12151:SF10 64 224 1.5E-29 T 20-04-2016 APS56_RS10180 a097f09fe873c39a0b62790756159894 224 Pfam PF02630 SCO1/SenC 58 200 3.3E-19 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC APS56_RS10180 a097f09fe873c39a0b62790756159894 224 PANTHER PTHR12151 64 224 1.5E-29 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC APS56_RS10180 a097f09fe873c39a0b62790756159894 224 Gene3D G3DSA:3.40.30.10 56 223 2.9E-46 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS10180 a097f09fe873c39a0b62790756159894 224 SUPERFAMILY SSF52833 61 222 6.84E-41 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 SMART SM00388 134 202 9.8E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 297 307 5.7E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 5.7E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 279 293 5.7E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 5.7E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 PANTHER PTHR24423 113 346 9.5E-59 T 20-04-2016 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 SUPERFAMILY SSF47384 122 202 1.33E-15 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 241 347 1.0E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 SMART SM00387 241 348 2.3E-26 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 Gene3D G3DSA:3.30.565.10 188 347 2.0E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 Pfam PF00512 His Kinase A (phospho-acceptor) domain 135 200 1.8E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 Gene3D G3DSA:1.10.287.130 126 187 2.6E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS15630 14d69c51fef1dac7ea3ad68abd56040e 348 SUPERFAMILY SSF55874 209 346 8.91E-35 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS08790 520c10980b60b2f038edd978676a0378 420 Gene3D G3DSA:3.40.50.2000 171 335 1.8E-9 T 20-04-2016 APS56_RS08790 520c10980b60b2f038edd978676a0378 420 Pfam PF00534 Glycosyl transferases group 1 161 287 4.0E-20 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS08790 520c10980b60b2f038edd978676a0378 420 SUPERFAMILY SSF53756 84 354 3.93E-33 T 20-04-2016 APS56_RS08790 520c10980b60b2f038edd978676a0378 420 PANTHER PTHR12526 102 287 5.3E-23 T 20-04-2016 APS56_RS08790 520c10980b60b2f038edd978676a0378 420 PANTHER PTHR12526 309 359 5.3E-23 T 20-04-2016 APS56_RS04155 55d270c450e2dafc13afefaaae96fbd4 186 PANTHER PTHR10681 57 174 6.8E-19 T 20-04-2016 APS56_RS04155 55d270c450e2dafc13afefaaae96fbd4 186 SUPERFAMILY SSF52833 56 185 4.5E-31 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS04155 55d270c450e2dafc13afefaaae96fbd4 186 Pfam PF00578 AhpC/TSA family 57 162 1.4E-17 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS04155 55d270c450e2dafc13afefaaae96fbd4 186 Gene3D G3DSA:3.40.30.10 11 186 6.0E-37 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS04155 55d270c450e2dafc13afefaaae96fbd4 186 PANTHER PTHR10681:SF68 57 174 6.8E-19 T 20-04-2016 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 SUPERFAMILY SSF52317 979 1223 7.56E-70 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 Pfam PF02769 AIR synthase related protein, C-terminal domain 387 540 2.5E-18 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 Pfam PF02769 AIR synthase related protein, C-terminal domain 787 907 1.3E-8 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 SUPERFAMILY SSF56042 769 961 6.28E-30 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 SUPERFAMILY SSF55326 575 764 2.51E-51 T 20-04-2016 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 SMART SM01211 979 1223 3.6E-100 T 20-04-2016 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 PANTHER PTHR10099 9 1226 0.0 T 20-04-2016 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 Gene3D G3DSA:3.30.1330.10 599 756 4.8E-11 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 Gene3D G3DSA:3.30.1330.10 162 374 1.6E-31 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 Gene3D G3DSA:3.40.50.880 980 1193 4.1E-7 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 SUPERFAMILY SSF55326 172 381 8.37E-43 T 20-04-2016 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 SUPERFAMILY SSF56042 387 566 6.13E-37 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 SUPERFAMILY SSF82697 10 95 5.75E-17 T 20-04-2016 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 SUPERFAMILY SSF109736 119 171 4.71E-12 T 20-04-2016 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 979 1222 3.1E-77 T 20-04-2016 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1224 18.811 T 20-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APS56_RS07760 a007167fc44f0d80c8de12a4d84b5e75 1226 PANTHER PTHR10099:SF1 9 1226 0.0 T 20-04-2016 APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 SMART SM00729 142 364 2.2E-44 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 PANTHER PTHR11918 1 431 3.8E-120 T 20-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 Gene3D G3DSA:3.80.30.20 140 376 7.8E-65 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 430 2.8E-119 T 20-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 Pfam PF00919 Uncharacterized protein family UPF0004 4 99 2.3E-24 T 20-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 PANTHER PTHR11918:SF45 1 431 3.8E-120 T 20-04-2016 APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 7 421 3.7E-128 T 20-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 146 166 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 SUPERFAMILY SSF102114 138 374 6.02E-49 T 20-04-2016 APS56_RS15235 f350c58d9d3a6277d8519580a12ca2b5 441 Pfam PF04055 Radical SAM superfamily 148 322 4.1E-25 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS10815 19dba1b4cce6c22ef8c039f7156508d0 262 SUPERFAMILY SSF51735 4 260 2.8E-75 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10815 19dba1b4cce6c22ef8c039f7156508d0 262 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 5 261 1.1E-80 T 20-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APS56_RS10815 19dba1b4cce6c22ef8c039f7156508d0 262 PANTHER PTHR10491:SF4 1 259 3.0E-82 T 20-04-2016 APS56_RS10815 19dba1b4cce6c22ef8c039f7156508d0 262 Gene3D G3DSA:3.40.50.720 3 231 3.7E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10815 19dba1b4cce6c22ef8c039f7156508d0 262 PANTHER PTHR10491 1 259 3.0E-82 T 20-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APS56_RS10815 19dba1b4cce6c22ef8c039f7156508d0 262 Pfam PF04321 RmlD substrate binding domain 4 261 1.0E-83 T 20-04-2016 IPR029903 RmlD-like substrate binding domain APS56_RS13750 5335d0f11f459ad8097c9a5c17d07801 417 PANTHER PTHR36845 22 406 8.7E-85 T 20-04-2016 APS56_RS13750 5335d0f11f459ad8097c9a5c17d07801 417 PANTHER PTHR36845:SF1 22 406 8.7E-85 T 20-04-2016 APS56_RS13750 5335d0f11f459ad8097c9a5c17d07801 417 SUPERFAMILY SSF48208 47 409 1.43E-91 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS13750 5335d0f11f459ad8097c9a5c17d07801 417 Pfam PF07470 Glycosyl Hydrolase Family 88 62 406 2.0E-12 T 20-04-2016 IPR010905 Glycosyl hydrolase, family 88 APS56_RS13750 5335d0f11f459ad8097c9a5c17d07801 417 Gene3D G3DSA:1.50.10.10 31 410 1.1E-129 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 Gene3D G3DSA:2.40.100.10 93 227 4.7E-45 T 20-04-2016 IPR029000 Cyclophilin-like domain APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 12 215 5.1E-54 T 20-04-2016 IPR010016 KipI family APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 Pfam PF02682 Allophanate hydrolase subunit 1 8 205 4.1E-62 T 20-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 SMART SM00796 6 207 4.1E-59 T 20-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 PANTHER PTHR34698 2 244 1.8E-73 T 20-04-2016 APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 Gene3D G3DSA:3.30.1360.40 8 79 6.0E-14 T 20-04-2016 IPR024946 Arginine repressor C-terminal-like domain APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 PANTHER PTHR34698:SF2 2 244 1.8E-73 T 20-04-2016 APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 SUPERFAMILY SSF160467 8 98 1.83E-13 T 20-04-2016 APS56_RS03730 d6e238ee44cd1a5335a671bf230dcdb4 244 SUPERFAMILY SSF50891 93 223 6.83E-42 T 20-04-2016 IPR029000 Cyclophilin-like domain APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 Gene3D G3DSA:3.30.300.20 18 106 6.6E-31 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 Gene3D G3DSA:3.30.1140.32 108 206 2.9E-42 T 20-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 SUPERFAMILY SSF54821 106 205 2.22E-38 T 20-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 20-04-2016 IPR018280 Ribosomal protein S3, conserved site APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 36.39 T 20-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 2.1E-38 T 20-04-2016 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 PANTHER PTHR11760 2 212 3.1E-121 T 20-04-2016 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 3.3E-86 T 20-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 Pfam PF07650 KH domain 37 110 2.4E-20 T 20-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 SUPERFAMILY SSF54814 2 105 1.18E-34 T 20-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 SMART SM00322 59 124 1.1E-6 T 20-04-2016 IPR004087 K Homology domain GO:0003676 APS56_RS13975 1919b8342ecfd20333419fcd2ed48f61 239 PANTHER PTHR11760:SF19 2 212 3.1E-121 T 20-04-2016 APS56_RS00160 850d5df173c8bdc405d5310e0810c9c3 334 Gene3D G3DSA:3.40.50.300 6 133 2.8E-15 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00160 850d5df173c8bdc405d5310e0810c9c3 334 PANTHER PTHR34388 1 332 1.4E-52 T 20-04-2016 APS56_RS00160 850d5df173c8bdc405d5310e0810c9c3 334 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 332 1.4E-62 T 20-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APS56_RS00160 850d5df173c8bdc405d5310e0810c9c3 334 Pfam PF06144 DNA polymerase III, delta subunit 20 186 5.2E-30 T 20-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APS56_RS00160 850d5df173c8bdc405d5310e0810c9c3 334 SUPERFAMILY SSF52540 7 204 2.55E-24 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00160 850d5df173c8bdc405d5310e0810c9c3 334 Gene3D G3DSA:1.10.8.60 141 227 7.2E-18 T 20-04-2016 APS56_RS00160 850d5df173c8bdc405d5310e0810c9c3 334 SUPERFAMILY SSF48019 210 325 2.89E-9 T 20-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APS56_RS04570 69210f82e34397e1d44eba7bf7ccf5c9 358 SUPERFAMILY SSF75005 36 148 1.34E-7 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS04570 69210f82e34397e1d44eba7bf7ccf5c9 358 SUPERFAMILY SSF75005 116 309 3.43E-21 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS04570 69210f82e34397e1d44eba7bf7ccf5c9 358 Gene3D G3DSA:2.115.10.20 245 310 3.3E-4 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS04570 69210f82e34397e1d44eba7bf7ccf5c9 358 Gene3D G3DSA:2.115.10.20 53 111 6.7E-5 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS04570 69210f82e34397e1d44eba7bf7ccf5c9 358 Gene3D G3DSA:2.115.10.20 117 214 4.5E-11 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 PANTHER PTHR30194 1 174 2.0E-57 T 20-04-2016 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 117 152 - T 20-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 5 158 41.016 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 65 81 3.2E-29 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 87 103 3.2E-29 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 111 130 3.2E-29 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 143 155 3.2E-29 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 8 21 3.2E-29 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 SUPERFAMILY SSF53098 6 159 1.57E-42 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 Gene3D G3DSA:3.30.420.10 6 160 1.1E-52 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 7 157 2.9E-37 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APS56_RS12785 dcf649550b9a3f1f506befcb33f4feff 184 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 7 155 8.1E-41 T 20-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 PIRSF PIRSF001456 3 352 4.2E-145 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 ProSitePatterns PS00789 Chorismate synthase signature 3. 321 337 - T 20-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 Hamap MF_00300 Chorismate synthase [aroC]. 10 351 36.039 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 PANTHER PTHR21085 2 348 4.5E-206 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 20-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 Pfam PF01264 Chorismate synthase 10 347 2.3E-143 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 Gene3D G3DSA:3.60.150.10 9 348 2.0E-155 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 TIGRFAM TIGR00033 aroC: chorismate synthase 10 349 9.7E-138 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 20-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS02345 6bcd83266d55ec3e0a4e31cea237981d 353 SUPERFAMILY SSF103263 4 349 4.06E-137 T 20-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS03965 7d35a8623095f2132fd292e09ae9f09d 392 Gene3D G3DSA:3.90.1150.10 16 53 2.9E-24 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS03965 7d35a8623095f2132fd292e09ae9f09d 392 Gene3D G3DSA:3.90.1150.10 300 389 2.9E-24 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS03965 7d35a8623095f2132fd292e09ae9f09d 392 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 213 250 - T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS03965 7d35a8623095f2132fd292e09ae9f09d 392 Pfam PF00202 Aminotransferase class-III 15 388 1.4E-94 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS03965 7d35a8623095f2132fd292e09ae9f09d 392 Gene3D G3DSA:3.40.640.10 54 297 1.2E-76 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS03965 7d35a8623095f2132fd292e09ae9f09d 392 PANTHER PTHR11986 15 392 2.5E-124 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS03965 7d35a8623095f2132fd292e09ae9f09d 392 SUPERFAMILY SSF53383 9 390 5.49E-113 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS13470 65ccdbcb6548fd432d555895c284273e 198 PANTHER PTHR34478 1 198 1.2E-67 T 20-04-2016 APS56_RS13470 65ccdbcb6548fd432d555895c284273e 198 Gene3D G3DSA:1.20.1440.20 18 195 7.5E-58 T 20-04-2016 IPR023353 LemA-like domain APS56_RS13470 65ccdbcb6548fd432d555895c284273e 198 SUPERFAMILY SSF140478 29 183 1.83E-52 T 20-04-2016 IPR023353 LemA-like domain APS56_RS13470 65ccdbcb6548fd432d555895c284273e 198 PANTHER PTHR34478:SF2 1 198 1.2E-67 T 20-04-2016 APS56_RS13470 65ccdbcb6548fd432d555895c284273e 198 Pfam PF04011 LemA family 8 195 3.9E-63 T 20-04-2016 IPR007156 LemA APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 PANTHER PTHR30480:SF5 31 754 8.2E-117 T 20-04-2016 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 PANTHER PTHR30480 31 754 8.2E-117 T 20-04-2016 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 47 362 3.1E-88 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 Pfam PF00144 Beta-lactamase 599 948 8.0E-37 T 20-04-2016 IPR001466 Beta-lactamase-related APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 PRINTS PR00133 Glycosyl hydrolase family 3 signature 206 222 2.6E-7 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 PRINTS PR00133 Glycosyl hydrolase family 3 signature 103 119 2.6E-7 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 PRINTS PR00133 Glycosyl hydrolase family 3 signature 284 302 2.6E-7 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 PRINTS PR00133 Glycosyl hydrolase family 3 signature 128 147 2.6E-7 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 Gene3D G3DSA:3.20.20.300 52 376 1.2E-94 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 SUPERFAMILY SSF56601 586 963 1.46E-65 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 284 301 - T 20-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 SUPERFAMILY SSF51445 33 394 2.0E-96 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS03630 1e1e3232dc4b13cfc2a54b84e723c0b7 972 Gene3D G3DSA:3.40.710.10 574 968 5.2E-70 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS08780 a3f45a831ea72a3f0e6ae803b201b0f3 328 Pfam PF12146 Serine aminopeptidase, S33 77 309 2.5E-15 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APS56_RS08780 a3f45a831ea72a3f0e6ae803b201b0f3 328 SUPERFAMILY SSF53474 55 325 2.59E-30 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS08780 a3f45a831ea72a3f0e6ae803b201b0f3 328 Gene3D G3DSA:3.40.50.1820 65 327 4.5E-31 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS08780 a3f45a831ea72a3f0e6ae803b201b0f3 328 PANTHER PTHR10992 215 328 6.4E-15 T 20-04-2016 APS56_RS08780 a3f45a831ea72a3f0e6ae803b201b0f3 328 PANTHER PTHR10992 60 199 6.4E-15 T 20-04-2016 APS56_RS00175 cd5c2d380a770af144accaf46b4b8b6a 279 Gene3D G3DSA:3.90.226.10 10 216 3.9E-62 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00175 cd5c2d380a770af144accaf46b4b8b6a 279 PANTHER PTHR11941 1 273 9.0E-158 T 20-04-2016 APS56_RS00175 cd5c2d380a770af144accaf46b4b8b6a 279 TIGRFAM TIGR01929 menB: naphthoate synthase 12 275 5.4E-122 T 20-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APS56_RS00175 cd5c2d380a770af144accaf46b4b8b6a 279 Pfam PF00378 Enoyl-CoA hydratase/isomerase 21 275 1.7E-59 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APS56_RS00175 cd5c2d380a770af144accaf46b4b8b6a 279 PANTHER PTHR11941:SF20 1 273 9.0E-158 T 20-04-2016 APS56_RS00175 cd5c2d380a770af144accaf46b4b8b6a 279 Gene3D G3DSA:1.10.12.10 219 268 1.5E-27 T 20-04-2016 IPR014748 Crontonase, C-terminal APS56_RS00175 cd5c2d380a770af144accaf46b4b8b6a 279 SUPERFAMILY SSF52096 6 275 1.89E-74 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS00175 cd5c2d380a770af144accaf46b4b8b6a 279 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 6 279 50.91 T 20-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APS56_RS06835 0bc98d742a396fa695f05014a9fa5f36 154 Gene3D G3DSA:3.30.530.20 3 151 7.9E-26 T 20-04-2016 IPR023393 START-like domain APS56_RS06835 0bc98d742a396fa695f05014a9fa5f36 154 SUPERFAMILY SSF55961 12 152 2.34E-30 T 20-04-2016 APS56_RS06835 0bc98d742a396fa695f05014a9fa5f36 154 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 151 4.4E-14 T 20-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 APS56_RS08460 1b84c7642483534b7f393d77d0d7bf21 368 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 10 149 1.3E-35 T 20-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08460 1b84c7642483534b7f393d77d0d7bf21 368 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 197 350 2.5E-38 T 20-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08460 1b84c7642483534b7f393d77d0d7bf21 368 PANTHER PTHR21015 1 368 1.5E-120 T 20-04-2016 APS56_RS08460 1b84c7642483534b7f393d77d0d7bf21 368 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 10 366 32.255 T 20-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08460 1b84c7642483534b7f393d77d0d7bf21 368 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 361 1.2E-92 T 20-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS08460 1b84c7642483534b7f393d77d0d7bf21 368 SUPERFAMILY SSF53756 9 366 4.71E-105 T 20-04-2016 APS56_RS08460 1b84c7642483534b7f393d77d0d7bf21 368 PANTHER PTHR21015:SF22 1 368 1.5E-120 T 20-04-2016 APS56_RS08460 1b84c7642483534b7f393d77d0d7bf21 368 Gene3D G3DSA:3.40.50.2000 6 209 3.0E-62 T 20-04-2016 APS56_RS04670 f39a3324e8d58520dc7e642400765127 250 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 77 231 2.1E-21 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS04670 f39a3324e8d58520dc7e642400765127 250 Gene3D G3DSA:3.40.50.1110 53 241 1.9E-39 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS04670 f39a3324e8d58520dc7e642400765127 250 SUPERFAMILY SSF52266 51 242 1.28E-39 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS04670 f39a3324e8d58520dc7e642400765127 250 PANTHER PTHR30383 73 247 2.8E-23 T 20-04-2016 APS56_RS12070 f1a158bde15f6deca80421ffa1e5a8dd 383 Pfam PF00756 Putative esterase 29 143 1.4E-10 T 20-04-2016 IPR000801 Putative esterase APS56_RS12070 f1a158bde15f6deca80421ffa1e5a8dd 383 Gene3D G3DSA:3.40.50.1820 24 252 3.1E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS12070 f1a158bde15f6deca80421ffa1e5a8dd 383 SUPERFAMILY SSF53474 19 251 5.19E-24 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS10310 ca7ff9e4968ca1b527d8aab0e1accd07 626 SUPERFAMILY SSF75005 282 357 4.24E-5 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS10310 ca7ff9e4968ca1b527d8aab0e1accd07 626 Gene3D G3DSA:2.115.10.20 37 176 0.001 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS10310 ca7ff9e4968ca1b527d8aab0e1accd07 626 PANTHER PTHR11339:SF236 16 109 7.7E-16 T 20-04-2016 APS56_RS10310 ca7ff9e4968ca1b527d8aab0e1accd07 626 PANTHER PTHR11339:SF236 126 608 7.7E-16 T 20-04-2016 APS56_RS10310 ca7ff9e4968ca1b527d8aab0e1accd07 626 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 550 624 6.6E-8 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS10310 ca7ff9e4968ca1b527d8aab0e1accd07 626 Gene3D G3DSA:2.115.10.20 323 361 5.7E-4 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS10310 ca7ff9e4968ca1b527d8aab0e1accd07 626 PANTHER PTHR11339 16 109 7.7E-16 T 20-04-2016 APS56_RS10310 ca7ff9e4968ca1b527d8aab0e1accd07 626 PANTHER PTHR11339 126 608 7.7E-16 T 20-04-2016 APS56_RS08230 9f0494c62f7fcfddecca38e5be5cef84 248 SMART SM00448 4 118 3.0E-15 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS08230 9f0494c62f7fcfddecca38e5be5cef84 248 PANTHER PTHR26402 4 147 1.8E-14 T 20-04-2016 APS56_RS08230 9f0494c62f7fcfddecca38e5be5cef84 248 SUPERFAMILY SSF52172 1 152 5.41E-24 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS08230 9f0494c62f7fcfddecca38e5be5cef84 248 Gene3D G3DSA:3.40.50.2300 2 125 4.1E-21 T 20-04-2016 APS56_RS08230 9f0494c62f7fcfddecca38e5be5cef84 248 Gene3D G3DSA:2.40.50.40 143 212 1.9E-19 T 20-04-2016 APS56_RS08230 9f0494c62f7fcfddecca38e5be5cef84 248 Pfam PF04397 LytTr DNA-binding domain 154 239 9.0E-18 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS08230 9f0494c62f7fcfddecca38e5be5cef84 248 Pfam PF00072 Response regulator receiver domain 6 118 2.4E-14 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS08230 9f0494c62f7fcfddecca38e5be5cef84 248 SMART SM00850 152 246 2.0E-20 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 SUPERFAMILY SSF55920 1 246 1.44E-78 T 20-04-2016 IPR000994 Peptidase M24, structural domain APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 246 1.2E-89 T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 PANTHER PTHR10804 1 246 5.3E-105 T 20-04-2016 APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 5.9E-18 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 5.9E-18 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 5.9E-18 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 5.9E-18 T 20-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 PANTHER PTHR10804:SF41 1 246 5.3E-105 T 20-04-2016 APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 Gene3D G3DSA:3.90.230.10 1 248 6.1E-81 T 20-04-2016 IPR000994 Peptidase M24, structural domain APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 37.981 T 20-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APS56_RS06400 5eeae59d8b5eacc507d152dce9b9aaf9 272 Pfam PF00557 Metallopeptidase family M24 11 237 2.6E-46 T 20-04-2016 IPR000994 Peptidase M24, structural domain APS56_RS13065 dd423921d001abd1e44c8c2c37c9e04d 414 PANTHER PTHR30572 9 414 7.5E-61 T 20-04-2016 APS56_RS13065 dd423921d001abd1e44c8c2c37c9e04d 414 Pfam PF12704 MacB-like periplasmic core domain 25 243 2.7E-19 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APS56_RS13065 dd423921d001abd1e44c8c2c37c9e04d 414 Pfam PF02687 FtsX-like permease family 288 407 5.6E-19 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS13130 779fe27eaa515afa7b1b366613dfce35 246 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 12 239 5.5E-96 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APS56_RS13130 779fe27eaa515afa7b1b366613dfce35 246 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 12 240 40.613 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APS56_RS13130 779fe27eaa515afa7b1b366613dfce35 246 Gene3D G3DSA:3.40.1180.10 5 245 1.7E-100 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APS56_RS13130 779fe27eaa515afa7b1b366613dfce35 246 PANTHER PTHR10291 12 246 3.7E-122 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APS56_RS13130 779fe27eaa515afa7b1b366613dfce35 246 SUPERFAMILY SSF64005 10 235 9.42E-88 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APS56_RS13130 779fe27eaa515afa7b1b366613dfce35 246 Pfam PF01255 Putative undecaprenyl diphosphate synthase 19 239 6.1E-84 T 20-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APS56_RS13130 779fe27eaa515afa7b1b366613dfce35 246 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 185 202 - T 20-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 APS56_RS10425 8ccdccbad3f7e9daae11ae36c6a8c207 260 PANTHER PTHR11941:SF54 1 257 8.5E-94 T 20-04-2016 APS56_RS10425 8ccdccbad3f7e9daae11ae36c6a8c207 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 4.8E-64 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APS56_RS10425 8ccdccbad3f7e9daae11ae36c6a8c207 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 20-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APS56_RS10425 8ccdccbad3f7e9daae11ae36c6a8c207 260 Gene3D G3DSA:3.90.226.10 1 254 1.1E-85 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS10425 8ccdccbad3f7e9daae11ae36c6a8c207 260 PANTHER PTHR11941 1 257 8.5E-94 T 20-04-2016 APS56_RS10425 8ccdccbad3f7e9daae11ae36c6a8c207 260 SUPERFAMILY SSF52096 1 259 6.64E-86 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 20-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 291 55.098 T 20-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 9.3E-78 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 PANTHER PTHR12128:SF34 1 290 4.3E-102 T 20-04-2016 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 Gene3D G3DSA:3.20.20.70 2 291 6.7E-97 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 SMART SM01130 4 293 3.1E-105 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 3.5E-26 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 3.5E-26 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 3.5E-26 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 3.5E-26 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 PIRSF PIRSF001365 1 293 3.2E-80 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 PANTHER PTHR12128 1 290 4.3E-102 T 20-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 SUPERFAMILY SSF51569 5 290 1.47E-88 T 20-04-2016 APS56_RS16370 9bcdb182d2190bc2bd9b3098fbc0bc9d 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 290 2.1E-91 T 20-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS10930 9d91f9cede14f1f16e5cc64221ca0cc2 125 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 20-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 APS56_RS10930 9d91f9cede14f1f16e5cc64221ca0cc2 125 Gene3D G3DSA:3.30.230.10 2 120 1.2E-25 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS10930 9d91f9cede14f1f16e5cc64221ca0cc2 125 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 117 1.1E-13 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APS56_RS10930 9d91f9cede14f1f16e5cc64221ca0cc2 125 Pfam PF00825 Ribonuclease P 5 117 1.1E-21 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APS56_RS10930 9d91f9cede14f1f16e5cc64221ca0cc2 125 SUPERFAMILY SSF54211 10 114 2.17E-15 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS10930 9d91f9cede14f1f16e5cc64221ca0cc2 125 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 19 76 6.0E-6 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APS56_RS10930 9d91f9cede14f1f16e5cc64221ca0cc2 125 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 5 121 13.881 T 20-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APS56_RS09115 8b1591e2d2d6e4833bb0a8b660f92614 650 Pfam PF00801 PKD domain 47 99 9.7E-8 T 20-04-2016 IPR000601 PKD domain APS56_RS09115 8b1591e2d2d6e4833bb0a8b660f92614 650 Gene3D G3DSA:2.60.40.670 37 101 6.9E-11 T 20-04-2016 IPR000601 PKD domain APS56_RS09115 8b1591e2d2d6e4833bb0a8b660f92614 650 SUPERFAMILY SSF49299 31 101 3.27E-12 T 20-04-2016 IPR000601 PKD domain APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 PANTHER PTHR32120:SF2 1 302 5.9E-109 T 20-04-2016 APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 Gene3D G3DSA:3.40.50.300 80 242 1.0E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 SUPERFAMILY SSF50249 1 69 7.14E-12 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 44 302 1.5E-66 T 20-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 PANTHER PTHR32120 1 302 5.9E-109 T 20-04-2016 APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 Pfam PF16745 RsgA N-terminal domain 2 56 4.4E-18 T 20-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 Gene3D G3DSA:2.40.50.140 1 67 2.2E-19 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 1 308 33.785 T 20-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 Gene3D G3DSA:1.10.40.50 245 303 2.3E-22 T 20-04-2016 APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 Pfam PF03193 Protein of unknown function, DUF258 66 243 2.3E-49 T 20-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 APS56_RS07300 a2499bc6acdb770cb1fdc6b60fb2ab39 316 SUPERFAMILY SSF52540 82 306 1.36E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 SUPERFAMILY SSF51905 6 67 3.84E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 SUPERFAMILY SSF51905 98 260 3.84E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 4 623 40.74 T 20-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 6 621 7.2E-255 T 20-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 272 286 - T 20-04-2016 IPR020595 MnmG-related, conserved site APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 367 390 - T 20-04-2016 IPR020595 MnmG-related, conserved site APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 Pfam PF13932 GidA associated domain 400 618 1.5E-69 T 20-04-2016 IPR026904 GidA associated domain 3 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 PANTHER PTHR11806:SF0 2 621 0.0 T 20-04-2016 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 PANTHER PTHR11806 2 621 0.0 T 20-04-2016 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 Gene3D G3DSA:3.50.50.60 5 172 5.8E-33 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 SMART SM01228 548 619 1.5E-38 T 20-04-2016 APS56_RS10900 b007b6318ead8e052e57e200fc1cb9c7 623 Pfam PF01134 Glucose inhibited division protein A 7 395 2.3E-156 T 20-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 SUPERFAMILY SSF54197 179 338 1.58E-46 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 PANTHER PTHR11943:SF2 1 338 6.4E-174 T 20-04-2016 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 4 338 2.7E-138 T 20-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 20-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 Gene3D G3DSA:3.30.428.10 45 174 5.3E-53 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 PANTHER PTHR11943 1 338 6.4E-174 T 20-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 Gene3D G3DSA:3.30.428.10 176 338 9.3E-59 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 PIRSF PIRSF000808 1 339 5.2E-112 T 20-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 185 337 2.6E-48 T 20-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 SUPERFAMILY SSF54197 3 177 6.17E-65 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APS56_RS07905 25efaf6a1c074e5afce6360f1a22cfc2 339 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 176 1.1E-67 T 20-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APS56_RS15950 927f66abe1f418da60b2de5ee2226296 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 89 1.7E-8 T 20-04-2016 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family APS56_RS15950 927f66abe1f418da60b2de5ee2226296 95 PANTHER PTHR33755 1 92 5.6E-12 T 20-04-2016 APS56_RS06490 391b77b04585e7ccb50869189e6bfb9f 128 Pfam PF04379 Protein of unknown function (DUF525) 24 104 4.8E-31 T 20-04-2016 IPR007474 ApaG domain APS56_RS06490 391b77b04585e7ccb50869189e6bfb9f 128 SUPERFAMILY SSF110069 5 123 1.07E-40 T 20-04-2016 IPR007474 ApaG domain APS56_RS06490 391b77b04585e7ccb50869189e6bfb9f 128 Gene3D G3DSA:2.60.40.1470 3 124 5.5E-40 T 20-04-2016 IPR007474 ApaG domain APS56_RS06490 391b77b04585e7ccb50869189e6bfb9f 128 PANTHER PTHR14289 5 122 1.2E-33 T 20-04-2016 APS56_RS04340 8822065280b2b2506d9553b94f96f481 97 Gene3D G3DSA:1.10.238.10 26 90 3.8E-12 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS04340 8822065280b2b2506d9553b94f96f481 97 ProSitePatterns PS00018 EF-hand calcium-binding domain. 38 50 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS04340 8822065280b2b2506d9553b94f96f481 97 ProSitePatterns PS00018 EF-hand calcium-binding domain. 77 89 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS04340 8822065280b2b2506d9553b94f96f481 97 SMART SM00054 68 96 1.9 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS04340 8822065280b2b2506d9553b94f96f481 97 SMART SM00054 29 57 1.5 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS04340 8822065280b2b2506d9553b94f96f481 97 SUPERFAMILY SSF47473 25 91 2.44E-12 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS04340 8822065280b2b2506d9553b94f96f481 97 Pfam PF13499 EF-hand domain pair 33 91 3.7E-9 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS15730 0b1d90f979953c93d404a7b85655418f 217 Pfam PF16132 Domain of unknown function (DUF4843) 17 162 3.8E-23 T 20-04-2016 IPR032299 Protein of unknown function DUF4843 APS56_RS07545 d417b6736c0f4ba34532d9edbaf1dff2 442 PANTHER PTHR22604:SF92 4 408 2.0E-101 T 20-04-2016 APS56_RS07545 d417b6736c0f4ba34532d9edbaf1dff2 442 Gene3D G3DSA:3.30.360.10 191 399 1.0E-36 T 20-04-2016 APS56_RS07545 d417b6736c0f4ba34532d9edbaf1dff2 442 SUPERFAMILY SSF51735 37 209 4.96E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07545 d417b6736c0f4ba34532d9edbaf1dff2 442 Gene3D G3DSA:3.40.50.720 39 190 1.9E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07545 d417b6736c0f4ba34532d9edbaf1dff2 442 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 191 299 4.1E-4 T 20-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APS56_RS07545 d417b6736c0f4ba34532d9edbaf1dff2 442 SUPERFAMILY SSF55347 186 364 5.23E-23 T 20-04-2016 APS56_RS07545 d417b6736c0f4ba34532d9edbaf1dff2 442 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 44 170 5.8E-12 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS07545 d417b6736c0f4ba34532d9edbaf1dff2 442 PANTHER PTHR22604 4 408 2.0E-101 T 20-04-2016 APS56_RS05020 0f3591bc9cceecf79d0fde94c5878234 312 PANTHER PTHR22925:SF37 11 265 5.2E-74 T 20-04-2016 APS56_RS05020 0f3591bc9cceecf79d0fde94c5878234 312 PANTHER PTHR22925:SF37 282 308 5.2E-74 T 20-04-2016 APS56_RS05020 0f3591bc9cceecf79d0fde94c5878234 312 Pfam PF04616 Glycosyl hydrolases family 43 20 304 9.8E-40 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS05020 0f3591bc9cceecf79d0fde94c5878234 312 PANTHER PTHR22925 11 265 5.2E-74 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS05020 0f3591bc9cceecf79d0fde94c5878234 312 PANTHER PTHR22925 282 308 5.2E-74 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS05020 0f3591bc9cceecf79d0fde94c5878234 312 SUPERFAMILY SSF75005 20 310 7.72E-64 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS05020 0f3591bc9cceecf79d0fde94c5878234 312 Gene3D G3DSA:2.115.10.20 11 305 2.6E-72 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS12695 25f67a83f616a0e3dcf8d9de0a995828 317 Gene3D G3DSA:3.40.50.1820 63 305 2.1E-63 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS12695 25f67a83f616a0e3dcf8d9de0a995828 317 SUPERFAMILY SSF53474 71 293 1.32E-33 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS12695 25f67a83f616a0e3dcf8d9de0a995828 317 Pfam PF00326 Prolyl oligopeptidase family 139 293 5.7E-16 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APS56_RS12695 25f67a83f616a0e3dcf8d9de0a995828 317 PANTHER PTHR23024:SF41 68 307 1.8E-69 T 20-04-2016 APS56_RS12695 25f67a83f616a0e3dcf8d9de0a995828 317 PANTHER PTHR23024 68 307 1.8E-69 T 20-04-2016 APS56_RS12115 93b122cee86166922449e799af438cd6 324 SUPERFAMILY SSF53187 41 319 4.63E-57 T 20-04-2016 APS56_RS12115 93b122cee86166922449e799af438cd6 324 PIRSF PIRSF039012 3 324 1.9E-69 T 20-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 APS56_RS12115 93b122cee86166922449e799af438cd6 324 PANTHER PTHR37326:SF1 1 318 2.9E-73 T 20-04-2016 APS56_RS12115 93b122cee86166922449e799af438cd6 324 Gene3D G3DSA:3.40.630.10 36 230 3.1E-23 T 20-04-2016 APS56_RS12115 93b122cee86166922449e799af438cd6 324 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 49 319 2.7E-50 T 20-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 APS56_RS12115 93b122cee86166922449e799af438cd6 324 PANTHER PTHR37326 1 318 2.9E-73 T 20-04-2016 APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 20-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 SUPERFAMILY SSF52922 549 676 2.88E-28 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 PANTHER PTHR11624:SF1 2 314 5.5E-238 T 20-04-2016 APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 PANTHER PTHR11624:SF1 339 677 5.5E-238 T 20-04-2016 APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 339 9.3E-89 T 20-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 Gene3D G3DSA:3.40.50.920 551 676 3.9E-29 T 20-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 SUPERFAMILY SSF52518 4 313 2.44E-82 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 SMART SM00861 352 534 2.1E-47 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 Pfam PF02779 Transketolase, pyrimidine binding domain 352 531 6.3E-31 T 20-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 SUPERFAMILY SSF52518 343 533 3.29E-50 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 Gene3D G3DSA:3.40.50.970 336 537 6.3E-57 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 Gene3D G3DSA:3.40.50.970 2 323 1.0E-94 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 PANTHER PTHR11624 2 314 5.5E-238 T 20-04-2016 IPR033247 Transketolase family APS56_RS00565 b1acd2bf27ef37b8853628ad255cd40e 677 PANTHER PTHR11624 339 677 5.5E-238 T 20-04-2016 IPR033247 Transketolase family APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 PANTHER PTHR12725 1 198 1.1E-27 T 20-04-2016 APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 2.6E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 2.6E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.6E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 SUPERFAMILY SSF56784 6 198 2.6E-35 T 20-04-2016 IPR023214 HAD-like domain APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 182 1.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 PANTHER PTHR12725:SF63 1 198 1.1E-27 T 20-04-2016 APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 130 187 7.9E-13 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 Gene3D G3DSA:3.40.50.1000 3 199 1.5E-35 T 20-04-2016 IPR023214 HAD-like domain APS56_RS16160 5f2ab403150000169abd4c19c8f12f3b 205 Pfam PF13419 Haloacid dehalogenase-like hydrolase 63 184 3.1E-16 T 20-04-2016 IPR023214 HAD-like domain APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SMART SM00387 581 692 1.4E-26 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 PANTHER PTHR24423 342 689 5.8E-69 T 20-04-2016 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 PANTHER PTHR24423 162 181 5.8E-69 T 20-04-2016 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 PANTHER PTHR24423 112 117 5.8E-69 T 20-04-2016 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 344 455 5.6E-17 T 20-04-2016 IPR000014 PAS domain APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SUPERFAMILY SSF55781 157 331 1.72E-21 T 20-04-2016 IPR029016 GAF domain-like APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Pfam PF13185 GAF domain 189 331 6.5E-10 T 20-04-2016 IPR003018 GAF domain GO:0005515 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Pfam PF00072 Response regulator receiver domain 4 113 8.0E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Gene3D G3DSA:3.40.50.2300 2 122 4.6E-32 T 20-04-2016 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SUPERFAMILY SSF52172 1 129 1.85E-31 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SUPERFAMILY SSF55874 527 689 1.31E-34 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SUPERFAMILY SSF55785 349 454 9.02E-16 T 20-04-2016 IPR000014 PAS domain APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 6.0E-12 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 6.0E-12 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 649 6.0E-12 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 PRINTS PR00344 Bacterial sensor protein C-terminal signature 621 635 6.0E-12 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SUPERFAMILY SSF47384 457 534 5.3E-14 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SMART SM00388 471 538 5.8E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Gene3D G3DSA:3.30.450.20 344 477 1.3E-17 T 20-04-2016 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 582 691 2.4E-21 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SMART SM00091 344 409 0.0014 T 20-04-2016 IPR000014 PAS domain APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Gene3D G3DSA:3.30.450.40 165 341 4.0E-19 T 20-04-2016 IPR029016 GAF domain-like APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Gene3D G3DSA:3.30.565.10 524 689 8.1E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 SMART SM00448 2 116 3.7E-28 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Gene3D G3DSA:1.10.287.130 478 523 8.3E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Pfam PF00512 His Kinase A (phospho-acceptor) domain 472 535 2.7E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS01045 2ad1178036acc3eee4aa93cb530e9569 692 Pfam PF13426 PAS domain 355 450 1.2E-5 T 20-04-2016 IPR000014 PAS domain APS56_RS02180 a022815cb771920553af249d87d22d96 651 SUPERFAMILY SSF51126 459 638 1.33E-5 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 421 444 3100.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 558 588 1300.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 528 549 7700.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 478 499 310.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 278 300 0.77 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 500 526 2300.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 335 354 9900.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 312 334 11.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 SMART SM00710 457 477 2800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS02180 a022815cb771920553af249d87d22d96 651 Pfam PF13229 Right handed beta helix region 233 411 1.1E-7 T 20-04-2016 APS56_RS02180 a022815cb771920553af249d87d22d96 651 Gene3D G3DSA:2.160.20.10 228 469 1.1E-12 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS02180 a022815cb771920553af249d87d22d96 651 Gene3D G3DSA:2.160.20.10 89 154 1.1E-12 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS02180 a022815cb771920553af249d87d22d96 651 SUPERFAMILY SSF51126 203 471 4.19E-20 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS04430 872aff2231c18e514a7d10e14420354c 433 SUPERFAMILY SSF49464 47 130 1.7E-10 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS04430 872aff2231c18e514a7d10e14420354c 433 Pfam PF13715 CarboxypepD_reg-like domain 47 131 2.5E-11 T 20-04-2016 APS56_RS04430 872aff2231c18e514a7d10e14420354c 433 Gene3D G3DSA:2.60.40.1120 47 107 2.0E-5 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS15220 d32fd1ccc70d2e38853dfa1c143e5fc7 391 Pfam PF13562 Sugar nucleotidyl transferase 3 151 1.3E-53 T 20-04-2016 IPR023917 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type APS56_RS15220 d32fd1ccc70d2e38853dfa1c143e5fc7 391 SUPERFAMILY SSF51161 185 343 1.55E-18 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS15220 d32fd1ccc70d2e38853dfa1c143e5fc7 391 PANTHER PTHR22572:SF99 166 341 3.3E-28 T 20-04-2016 APS56_RS15220 d32fd1ccc70d2e38853dfa1c143e5fc7 391 TIGRFAM TIGR03991 alt_bact_glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1 382 1.1E-144 T 20-04-2016 IPR023917 UDP-GlcNAc diphosphorylase/GlcNAc-1-P N-acetyltransferase, GlmU, bacterial-type APS56_RS15220 d32fd1ccc70d2e38853dfa1c143e5fc7 391 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 210 234 0.0011 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS15220 d32fd1ccc70d2e38853dfa1c143e5fc7 391 Gene3D G3DSA:2.160.10.10 161 329 1.4E-18 T 20-04-2016 APS56_RS15220 d32fd1ccc70d2e38853dfa1c143e5fc7 391 PANTHER PTHR22572 166 341 3.3E-28 T 20-04-2016 APS56_RS14520 7ae66d58dc647b44fdac1ff8a346083b 144 Pfam PF02082 Transcriptional regulator 2 84 4.1E-15 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APS56_RS14520 7ae66d58dc647b44fdac1ff8a346083b 144 Gene3D G3DSA:1.10.10.10 2 136 8.7E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS14520 7ae66d58dc647b44fdac1ff8a346083b 144 SUPERFAMILY SSF46785 1 134 7.91E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS14520 7ae66d58dc647b44fdac1ff8a346083b 144 PANTHER PTHR33221 1 136 3.8E-24 T 20-04-2016 APS56_RS14520 7ae66d58dc647b44fdac1ff8a346083b 144 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 4.0E-25 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APS56_RS11875 ea0c1f3394dbe44ddd86c014f1bedd93 96 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.7E-27 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS11875 ea0c1f3394dbe44ddd86c014f1bedd93 96 SMART SM00411 1 90 3.4E-26 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS11875 ea0c1f3394dbe44ddd86c014f1bedd93 96 Gene3D G3DSA:4.10.520.10 1 91 1.1E-29 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APS56_RS11875 ea0c1f3394dbe44ddd86c014f1bedd93 96 PANTHER PTHR33175 1 96 9.1E-31 T 20-04-2016 APS56_RS11875 ea0c1f3394dbe44ddd86c014f1bedd93 96 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 8.1E-8 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS11875 ea0c1f3394dbe44ddd86c014f1bedd93 96 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 8.1E-8 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS11875 ea0c1f3394dbe44ddd86c014f1bedd93 96 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 8.1E-8 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS11875 ea0c1f3394dbe44ddd86c014f1bedd93 96 SUPERFAMILY SSF47729 1 90 2.65E-25 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APS56_RS04235 23c806bf7c1e5f909e9da505ac956de3 918 Gene3D G3DSA:2.130.10.10 207 317 5.6E-7 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS04235 23c806bf7c1e5f909e9da505ac956de3 918 Gene3D G3DSA:2.130.10.10 386 387 5.6E-7 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS04235 23c806bf7c1e5f909e9da505ac956de3 918 Gene3D G3DSA:2.130.10.10 758 799 5.6E-7 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS04235 23c806bf7c1e5f909e9da505ac956de3 918 Pfam PF13585 C-terminal domain of CHU protein family 834 907 1.9E-14 T 20-04-2016 APS56_RS04235 23c806bf7c1e5f909e9da505ac956de3 918 SUPERFAMILY SSF51004 202 305 7.32E-7 T 20-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APS56_RS04235 23c806bf7c1e5f909e9da505ac956de3 918 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 832 918 3.3E-34 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS06405 f8ef1ba991be7adb60f8531f012d93d9 254 Pfam PF08241 Methyltransferase domain 118 172 1.7E-15 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APS56_RS06405 f8ef1ba991be7adb60f8531f012d93d9 254 SUPERFAMILY SSF53335 125 232 3.03E-21 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS06405 f8ef1ba991be7adb60f8531f012d93d9 254 Gene3D G3DSA:3.40.50.150 125 231 1.8E-26 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS06405 f8ef1ba991be7adb60f8531f012d93d9 254 PANTHER PTHR22916 68 206 1.8E-23 T 20-04-2016 APS56_RS06405 f8ef1ba991be7adb60f8531f012d93d9 254 PANTHER PTHR22916:SF33 68 206 1.8E-23 T 20-04-2016 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 SMART SM00342 212 295 8.3E-26 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 PANTHER PTHR11019:SF61 161 295 7.6E-35 T 20-04-2016 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 249 291 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 PANTHER PTHR11019 161 295 7.6E-35 T 20-04-2016 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 SUPERFAMILY SSF46689 248 294 1.43E-10 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 Pfam PF12833 Helix-turn-helix domain 218 294 3.2E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 Gene3D G3DSA:1.10.10.60 197 245 6.0E-6 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 295 1.5E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 279 1.5E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS10455 76e40fc002280dc3dbfb9f1445bc8ef2 299 Gene3D G3DSA:1.10.10.60 248 294 6.4E-13 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09490 150bc55c21f4ae99a1258a6475a92bda 768 PANTHER PTHR11101:SF16 413 747 7.4E-14 T 20-04-2016 APS56_RS09490 150bc55c21f4ae99a1258a6475a92bda 768 PANTHER PTHR11101:SF16 1 86 7.4E-14 T 20-04-2016 APS56_RS09490 150bc55c21f4ae99a1258a6475a92bda 768 PANTHER PTHR11101 413 747 7.4E-14 T 20-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APS56_RS09490 150bc55c21f4ae99a1258a6475a92bda 768 PANTHER PTHR11101 1 86 7.4E-14 T 20-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APS56_RS09490 150bc55c21f4ae99a1258a6475a92bda 768 Pfam PF01384 Phosphate transporter family 415 520 1.8E-9 T 20-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APS56_RS09490 150bc55c21f4ae99a1258a6475a92bda 768 Pfam PF01384 Phosphate transporter family 26 341 1.8E-28 T 20-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APS56_RS04915 dbbcbd99d5225ff0cde957c3f588a4b7 137 PANTHER PTHR30574:SF7 4 129 5.2E-29 T 20-04-2016 APS56_RS04915 dbbcbd99d5225ff0cde957c3f588a4b7 137 PANTHER PTHR30574 4 129 5.2E-29 T 20-04-2016 APS56_RS04915 dbbcbd99d5225ff0cde957c3f588a4b7 137 Pfam PF04143 Sulphur transport 28 129 2.8E-9 T 20-04-2016 IPR007272 Sulphur transport domain APS56_RS11175 9eb58326b54ffadfcb966a8fba00ef46 179 Pfam PF02620 Uncharacterized ACR, COG1399 58 175 1.3E-18 T 20-04-2016 IPR003772 Protein of unknown function DUF177 APS56_RS01920 39a5e66a0a1c938aca3d1ff1827a69cf 251 SUPERFAMILY SSF51366 1 250 4.71E-84 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APS56_RS01920 39a5e66a0a1c938aca3d1ff1827a69cf 251 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 250 1.6E-108 T 20-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APS56_RS01920 39a5e66a0a1c938aca3d1ff1827a69cf 251 Gene3D G3DSA:3.20.20.70 4 251 1.5E-101 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS01920 39a5e66a0a1c938aca3d1ff1827a69cf 251 PANTHER PTHR21235 1 251 2.0E-120 T 20-04-2016 APS56_RS01920 39a5e66a0a1c938aca3d1ff1827a69cf 251 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 250 47.378 T 20-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APS56_RS01920 39a5e66a0a1c938aca3d1ff1827a69cf 251 PANTHER PTHR21235:SF2 1 251 2.0E-120 T 20-04-2016 APS56_RS01920 39a5e66a0a1c938aca3d1ff1827a69cf 251 Pfam PF00977 Histidine biosynthesis protein 5 233 7.3E-89 T 20-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APS56_RS10125 d47c25b47ac752fbb47a23b23c2c4f85 239 Pfam PF02565 Recombination protein O C terminal 89 223 2.4E-18 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APS56_RS10125 d47c25b47ac752fbb47a23b23c2c4f85 239 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 237 1.7E-22 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APS56_RS10125 d47c25b47ac752fbb47a23b23c2c4f85 239 Pfam PF11967 Recombination protein O N terminal 1 82 6.3E-18 T 20-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal APS56_RS10125 d47c25b47ac752fbb47a23b23c2c4f85 239 PANTHER PTHR33991 1 223 5.3E-24 T 20-04-2016 APS56_RS10125 d47c25b47ac752fbb47a23b23c2c4f85 239 SUPERFAMILY SSF50249 1 82 2.91E-10 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS10125 d47c25b47ac752fbb47a23b23c2c4f85 239 Hamap MF_00201 DNA repair protein RecO [recO]. 1 237 16.469 T 20-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APS56_RS10125 d47c25b47ac752fbb47a23b23c2c4f85 239 SUPERFAMILY SSF57863 88 223 1.94E-12 T 20-04-2016 APS56_RS10125 d47c25b47ac752fbb47a23b23c2c4f85 239 Gene3D G3DSA:2.40.50.140 2 85 9.5E-11 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS07365 ce7a3f713eed2a0bc8b56cc5e078e21a 338 Gene3D G3DSA:3.20.20.330 1 330 2.2E-114 T 20-04-2016 IPR003726 Homocysteine-binding domain APS56_RS07365 ce7a3f713eed2a0bc8b56cc5e078e21a 338 SUPERFAMILY SSF82282 2 330 1.07E-100 T 20-04-2016 IPR003726 Homocysteine-binding domain APS56_RS07365 ce7a3f713eed2a0bc8b56cc5e078e21a 338 PANTHER PTHR21091 1 319 4.2E-174 T 20-04-2016 APS56_RS07365 ce7a3f713eed2a0bc8b56cc5e078e21a 338 Pfam PF02574 Homocysteine S-methyltransferase 13 319 3.5E-91 T 20-04-2016 IPR003726 Homocysteine-binding domain APS56_RS07365 ce7a3f713eed2a0bc8b56cc5e078e21a 338 PANTHER PTHR21091:SF111 1 319 4.2E-174 T 20-04-2016 APS56_RS12330 dafc45687177f2c7f47985ee03cf9a64 240 SUPERFAMILY SSF53448 5 219 4.66E-36 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS12330 dafc45687177f2c7f47985ee03cf9a64 240 PANTHER PTHR10859 6 221 2.3E-59 T 20-04-2016 APS56_RS12330 dafc45687177f2c7f47985ee03cf9a64 240 Gene3D G3DSA:3.90.550.10 6 198 1.5E-20 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS12330 dafc45687177f2c7f47985ee03cf9a64 240 Pfam PF00535 Glycosyl transferase family 2 6 172 7.4E-26 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Gene3D G3DSA:3.30.70.1430 572 668 6.8E-6 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Gene3D G3DSA:3.30.2090.10 189 272 3.8E-16 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Gene3D G3DSA:3.30.2090.10 725 810 5.8E-19 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF82714 189 271 3.27E-15 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PANTHER PTHR32063 2 1076 0.0 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF82693 152 188 2.2E-16 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF82693 274 331 2.2E-16 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1040 0.0 T 20-04-2016 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF82693 567 667 6.8E-7 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Pfam PF00873 AcrB/AcrD/AcrF family 5 1031 3.4E-285 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF56954 1041 1441 8.5E-46 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Pfam PF02321 Outer membrane efflux protein 1275 1442 4.6E-14 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Pfam PF02321 Outer membrane efflux protein 1075 1249 2.6E-16 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF82866 809 1034 1.22E-50 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF82693 42 132 1.39E-18 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Gene3D G3DSA:1.20.1600.10 1073 1441 3.3E-63 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Gene3D G3DSA:1.10.3850.10 282 505 2.1E-48 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Gene3D G3DSA:1.10.3850.10 816 1033 2.0E-58 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PANTHER PTHR32063:SF24 2 1076 0.0 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 Gene3D G3DSA:3.30.70.1430 42 141 1.4E-20 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 9.7E-19 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 9.7E-19 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PRINTS PR00702 Acriflavin resistance protein family signature 624 638 9.7E-19 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 9.7E-19 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 9.7E-19 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 9.7E-19 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 9.7E-19 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF82866 297 505 1.7E-31 T 20-04-2016 APS56_RS01445 0d771a2bc72f275cdf75ba5c05b57728 1444 SUPERFAMILY SSF82714 725 810 5.1E-17 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 SMART SM01360 1250 1340 4.6E-20 T 20-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 PANTHER PTHR11412:SF80 2009 2023 6.2E-25 T 20-04-2016 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 PANTHER PTHR11412:SF80 501 869 6.2E-25 T 20-04-2016 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 PANTHER PTHR11412:SF80 907 1438 6.2E-25 T 20-04-2016 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 Pfam PF01835 MG2 domain 585 675 2.4E-18 T 20-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 SUPERFAMILY SSF48239 1482 1517 5.97E-12 T 20-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 SUPERFAMILY SSF48239 1704 1821 5.97E-12 T 20-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 SUPERFAMILY SSF48239 1574 1646 5.97E-12 T 20-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 Gene3D G3DSA:1.50.10.20 1481 1526 1.8E-9 T 20-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 Gene3D G3DSA:1.50.10.20 1572 1820 1.8E-9 T 20-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 SMART SM01359 969 1109 5.4E-4 T 20-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 PANTHER PTHR11412 2009 2023 6.2E-25 T 20-04-2016 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 PANTHER PTHR11412 501 869 6.2E-25 T 20-04-2016 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 PANTHER PTHR11412 907 1438 6.2E-25 T 20-04-2016 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 971 1105 7.9E-6 T 20-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APS56_RS06520 e56b8e4302db2c2ee4a527f4144172b3 2045 Pfam PF00207 Alpha-2-macroglobulin family 1250 1337 9.4E-16 T 20-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APS56_RS04050 ae4e4d49668e07d1dc09b0e7c94fa1f1 310 SUPERFAMILY SSF54534 105 221 2.95E-13 T 20-04-2016 APS56_RS04050 ae4e4d49668e07d1dc09b0e7c94fa1f1 310 Gene3D G3DSA:3.10.50.40 99 225 1.5E-20 T 20-04-2016 APS56_RS04050 ae4e4d49668e07d1dc09b0e7c94fa1f1 310 Gene3D G3DSA:4.10.1080.10 226 302 1.3E-4 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 SUPERFAMILY SSF51621 35 855 1.02E-208 T 20-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 511 531 4.2E-29 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 687 713 4.2E-29 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 142 155 4.2E-29 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 553 582 4.2E-29 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 238 253 4.2E-29 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 183 199 4.2E-29 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 PANTHER PTHR30523:SF0 88 861 5.4E-168 T 20-04-2016 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 PANTHER PTHR30523 88 861 5.4E-168 T 20-04-2016 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 Pfam PF00311 Phosphoenolpyruvate carboxylase 309 845 3.9E-113 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APS56_RS09465 5e453cdf3656ea11c7c0f0ffedccc5dd 861 Pfam PF00311 Phosphoenolpyruvate carboxylase 138 285 3.2E-21 T 20-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 4.4E-10 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 SUPERFAMILY SSF53822 65 337 3.53E-71 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 SUPERFAMILY SSF47413 5 63 1.5E-14 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 Gene3D G3DSA:1.10.260.40 6 57 6.7E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 PANTHER PTHR30146 5 337 5.2E-105 T 20-04-2016 APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 Gene3D G3DSA:3.40.50.2300 58 178 1.0E-41 T 20-04-2016 APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 Pfam PF13377 Periplasmic binding protein-like domain 174 336 3.5E-34 T 20-04-2016 APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 SMART SM00354 5 75 5.1E-20 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS00540 bd02d24538464085165e2c6a4f9ab392 339 Gene3D G3DSA:3.40.50.2300 179 315 2.5E-45 T 20-04-2016 APS56_RS07170 90ba02d106ada8f19a72ee3486123a71 347 Gene3D G3DSA:3.30.9.10 193 288 1.7E-11 T 20-04-2016 APS56_RS07170 90ba02d106ada8f19a72ee3486123a71 347 SUPERFAMILY SSF51971 275 332 3.41E-14 T 20-04-2016 APS56_RS07170 90ba02d106ada8f19a72ee3486123a71 347 SUPERFAMILY SSF51971 2 219 3.41E-14 T 20-04-2016 APS56_RS07170 90ba02d106ada8f19a72ee3486123a71 347 SUPERFAMILY SSF54373 206 288 1.44E-7 T 20-04-2016 APS56_RS07170 90ba02d106ada8f19a72ee3486123a71 347 Gene3D G3DSA:3.50.50.60 290 333 5.9E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07170 90ba02d106ada8f19a72ee3486123a71 347 Gene3D G3DSA:3.50.50.60 131 192 5.9E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07170 90ba02d106ada8f19a72ee3486123a71 347 Gene3D G3DSA:3.50.50.60 2 82 5.9E-15 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07170 90ba02d106ada8f19a72ee3486123a71 347 Pfam PF01266 FAD dependent oxidoreductase 4 326 1.5E-19 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APS56_RS02805 517b6b2c04523d89392b887119ff8aa4 219 Pfam PF08892 YqcI/YcgG family 13 216 1.5E-64 T 20-04-2016 IPR014988 Uncharacterised protein family, YqcI/YcgG APS56_RS02805 517b6b2c04523d89392b887119ff8aa4 219 PANTHER PTHR40045 23 217 2.8E-30 T 20-04-2016 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 PIRSF PIRSF001400 1 429 5.4E-190 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 1.6E-202 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 427 2.9E-128 T 20-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 Pfam PF03952 Enolase, N-terminal domain 4 133 4.7E-61 T 20-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 SUPERFAMILY SSF51604 138 427 4.81E-124 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 SMART SM01192 138 429 2.2E-209 T 20-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 Hamap MF_00318 Enolase [eno]. 2 415 43.785 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 SUPERFAMILY SSF54826 3 137 1.43E-56 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 Gene3D G3DSA:3.30.390.10 4 125 2.4E-57 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 PANTHER PTHR11902 1 421 2.0E-256 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 Gene3D G3DSA:3.20.20.120 127 429 4.4E-133 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 ProSitePatterns PS00164 Enolase signature. 338 351 - T 20-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 PRINTS PR00148 Enolase signature 338 352 5.2E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 PRINTS PR00148 Enolase signature 37 51 5.2E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 PRINTS PR00148 Enolase signature 367 384 5.2E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 PRINTS PR00148 Enolase signature 106 122 5.2E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 PRINTS PR00148 Enolase signature 160 173 5.2E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 PRINTS PR00148 Enolase signature 315 326 5.2E-47 T 20-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS14085 298da9e49554e08fa66cd3baebc33aae 430 SMART SM01193 4 133 4.5E-96 T 20-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 324 533 4.7E-43 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 639 33.723 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 SUPERFAMILY SSF55681 240 531 2.19E-92 T 20-04-2016 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Gene3D G3DSA:3.40.50.800 536 639 2.9E-30 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Gene3D G3DSA:3.10.20.30 1 63 9.3E-20 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Pfam PF03129 Anticodon binding domain 547 635 1.7E-19 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 539 551 2.4E-50 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 2.4E-50 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 469 497 2.4E-50 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 512 525 2.4E-50 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 2.4E-50 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Gene3D G3DSA:3.30.930.10 239 533 1.8E-109 T 20-04-2016 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Gene3D G3DSA:3.30.54.20 132 184 1.5E-14 T 20-04-2016 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 SUPERFAMILY SSF55186 64 238 3.01E-56 T 20-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 216 3.7E-11 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Pfam PF02824 TGS domain 2 54 8.0E-8 T 20-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 SUPERFAMILY SSF52954 532 638 2.72E-27 T 20-04-2016 IPR004154 Anticodon-binding APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 636 2.2E-216 T 20-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 SUPERFAMILY SSF81271 2 62 1.77E-14 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Gene3D G3DSA:3.30.980.10 185 221 2.5E-39 T 20-04-2016 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 Gene3D G3DSA:3.30.980.10 66 130 2.5E-39 T 20-04-2016 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 SMART SM00863 167 216 2.9E-19 T 20-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 PANTHER PTHR11451 1 637 1.8E-293 T 20-04-2016 APS56_RS16640 0b12089f12d3117093a24304586eafbf 644 PANTHER PTHR11451:SF5 1 637 1.8E-293 T 20-04-2016 APS56_RS07060 16e7a3a09577ab34c0ed8a7c8175b03e 755 Gene3D G3DSA:3.40.50.300 136 150 2.1E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07060 16e7a3a09577ab34c0ed8a7c8175b03e 755 Gene3D G3DSA:3.40.50.300 1 35 2.1E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07060 16e7a3a09577ab34c0ed8a7c8175b03e 755 Gene3D G3DSA:3.40.50.300 90 91 2.1E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07060 16e7a3a09577ab34c0ed8a7c8175b03e 755 Pfam PF13166 AAA domain 13 727 2.1E-108 T 20-04-2016 IPR026866 P-loop containing protein CR006/PrrC APS56_RS07060 16e7a3a09577ab34c0ed8a7c8175b03e 755 Gene3D G3DSA:3.40.50.300 491 597 1.3E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07060 16e7a3a09577ab34c0ed8a7c8175b03e 755 Gene3D G3DSA:3.40.50.300 36 61 1.3E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07060 16e7a3a09577ab34c0ed8a7c8175b03e 755 SUPERFAMILY SSF52540 497 571 3.1E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07060 16e7a3a09577ab34c0ed8a7c8175b03e 755 SUPERFAMILY SSF52540 2 106 3.1E-13 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08665 15cc1787978ab4cf1590f67e8c70c2e4 268 Pfam PF01420 Type I restriction modification DNA specificity domain 146 242 2.0E-6 T 20-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APS56_RS08665 15cc1787978ab4cf1590f67e8c70c2e4 268 Pfam PF01420 Type I restriction modification DNA specificity domain 6 57 1.2E-5 T 20-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APS56_RS08665 15cc1787978ab4cf1590f67e8c70c2e4 268 PANTHER PTHR30408:SF2 7 264 3.1E-17 T 20-04-2016 APS56_RS08665 15cc1787978ab4cf1590f67e8c70c2e4 268 PANTHER PTHR30408 7 264 3.1E-17 T 20-04-2016 APS56_RS08665 15cc1787978ab4cf1590f67e8c70c2e4 268 SUPERFAMILY SSF116734 73 267 1.64E-35 T 20-04-2016 APS56_RS08665 15cc1787978ab4cf1590f67e8c70c2e4 268 SUPERFAMILY SSF116734 3 82 1.34E-20 T 20-04-2016 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 Gene3D G3DSA:3.30.360.10 109 201 4.9E-24 T 20-04-2016 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 PANTHER PTHR20836 1 233 1.3E-45 T 20-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 95 1.1E-12 T 20-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 SUPERFAMILY SSF55347 100 203 3.27E-20 T 20-04-2016 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 125 142 - T 20-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 101 230 6.7E-36 T 20-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 Gene3D G3DSA:3.40.50.720 1 108 1.4E-17 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 PIRSF PIRSF000161 1 233 1.9E-55 T 20-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 SUPERFAMILY SSF51735 202 231 1.1E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 SUPERFAMILY SSF51735 1 96 1.1E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 PANTHER PTHR20836:SF0 1 233 1.3E-45 T 20-04-2016 APS56_RS14485 7bc232c01e276d610d694b4a05b06fec 233 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 27 230 1.3E-41 T 20-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 ProSitePatterns PS00211 ABC transporters family signature. 482 496 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 Pfam PF00664 ABC transporter transmembrane region 30 299 1.1E-52 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 Gene3D G3DSA:1.20.1560.10 16 325 2.0E-74 T 20-04-2016 APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 PANTHER PTHR24221 12 586 1.9E-210 T 20-04-2016 APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 SUPERFAMILY SSF52540 335 582 2.04E-84 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 SMART SM00382 370 556 1.6E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 SUPERFAMILY SSF90123 16 325 1.44E-72 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 Pfam PF00005 ABC transporter 361 510 4.6E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS04985 ad500499c60d437a0f2736b412d4aa89 588 Gene3D G3DSA:3.40.50.300 344 574 1.4E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 SUPERFAMILY SSF52172 457 574 4.84E-28 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 Gene3D G3DSA:3.30.565.10 284 429 1.0E-37 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 Pfam PF00072 Response regulator receiver domain 458 569 2.4E-22 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 SMART SM00388 204 270 9.3E-12 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 431 4.0E-24 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 SUPERFAMILY SSF47384 191 271 1.06E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 Gene3D G3DSA:1.10.287.130 199 265 5.1E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 270 3.1E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 2.3E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 2.3E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 2.3E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 2.3E-11 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 SMART SM00387 318 434 8.8E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 SMART SM00448 456 569 3.7E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 PANTHER PTHR24423 202 577 2.6E-97 T 20-04-2016 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 PANTHER PTHR24423 11 16 2.6E-97 T 20-04-2016 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 Gene3D G3DSA:3.40.50.2300 455 572 1.1E-28 T 20-04-2016 APS56_RS03590 bcf81a202fe2d05b53b3853c0bdaed52 579 SUPERFAMILY SSF55874 259 430 6.29E-38 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS07135 850be4edd327017477534b8c50726583 59 Pfam PF14255 Cysteine-rich CPXCG 7 45 2.7E-17 T 20-04-2016 IPR025990 Cysteine-rich CPXCG protein APS56_RS07135 850be4edd327017477534b8c50726583 59 PIRSF PIRSF037225 1 58 2.2E-17 T 20-04-2016 IPR017143 Uncharacterised conserved protein UCP037225 APS56_RS15080 0b5f0568ad1dfb16b75293f7b4be6972 747 Pfam PF07940 Heparinase II/III-like protein 411 582 2.3E-8 T 20-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 APS56_RS15080 0b5f0568ad1dfb16b75293f7b4be6972 747 PANTHER PTHR39210 179 577 4.1E-23 T 20-04-2016 APS56_RS15080 0b5f0568ad1dfb16b75293f7b4be6972 747 Pfam PF16889 Heparinase II/III N-terminus 127 352 9.0E-20 T 20-04-2016 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 APS56_RS15080 0b5f0568ad1dfb16b75293f7b4be6972 747 SUPERFAMILY SSF48230 130 363 2.56E-16 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS10155 e556890bee1848e7357be53db24529da 117 Pfam PF03960 ArsC family 46 110 5.0E-9 T 20-04-2016 IPR006660 Arsenate reductase-like APS56_RS10155 e556890bee1848e7357be53db24529da 117 SUPERFAMILY SSF52833 1 110 9.4E-20 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS10155 e556890bee1848e7357be53db24529da 117 Gene3D G3DSA:3.40.30.10 2 110 1.3E-16 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS07885 1054fd757a83a524c807346620b1c4fe 298 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 109 151 5.1E-19 T 20-04-2016 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal UniPathway: UPA00705 APS56_RS07885 1054fd757a83a524c807346620b1c4fe 298 SUPERFAMILY SSF46626 127 279 5.3E-24 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS07885 1054fd757a83a524c807346620b1c4fe 298 PANTHER PTHR33751:SF1 96 286 7.8E-48 T 20-04-2016 APS56_RS07885 1054fd757a83a524c807346620b1c4fe 298 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 195 269 2.3E-10 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS07885 1054fd757a83a524c807346620b1c4fe 298 Gene3D G3DSA:1.10.760.10 132 153 1.7E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS07885 1054fd757a83a524c807346620b1c4fe 298 Gene3D G3DSA:1.10.760.10 189 286 1.7E-27 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS07885 1054fd757a83a524c807346620b1c4fe 298 PANTHER PTHR33751 96 286 7.8E-48 T 20-04-2016 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SMART SM00028 314 347 2.7E-5 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SMART SM00028 348 381 76.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SMART SM00028 110 143 160.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SMART SM00028 382 415 420.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SMART SM00028 42 75 41.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SMART SM00028 420 453 180.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SMART SM00028 76 109 0.0045 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 Gene3D G3DSA:1.25.40.10 309 449 3.3E-18 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 PANTHER PTHR23083 38 273 2.1E-37 T 20-04-2016 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 PANTHER PTHR23083 311 446 2.1E-37 T 20-04-2016 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SUPERFAMILY SSF81901 312 448 2.28E-22 T 20-04-2016 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SUPERFAMILY SSF81901 184 272 2.28E-22 T 20-04-2016 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 Pfam PF13432 Tetratricopeptide repeat 81 136 4.0E-4 T 20-04-2016 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 Pfam PF13432 Tetratricopeptide repeat 318 382 1.5E-6 T 20-04-2016 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 SUPERFAMILY SSF48452 42 165 2.03E-19 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10635 8fbb7043ec709e738779eed9a5227691 453 Gene3D G3DSA:1.25.40.10 38 274 1.5E-30 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 99 114 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 37 50 - T 20-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 PANTHER PTHR32071:SF23 8 264 2.8E-138 T 20-04-2016 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 PANTHER PTHR32071:SF23 340 422 2.8E-138 T 20-04-2016 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 SUPERFAMILY SSF46689 361 422 1.46E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 Gene3D G3DSA:1.10.10.60 376 419 1.5E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 PANTHER PTHR32071 8 264 2.8E-138 T 20-04-2016 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 PANTHER PTHR32071 340 422 2.8E-138 T 20-04-2016 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 SUPERFAMILY SSF52540 12 256 3.13E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 Gene3D G3DSA:1.10.8.60 185 260 2.9E-19 T 20-04-2016 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 Gene3D G3DSA:3.40.50.300 13 184 2.2E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 Pfam PF02954 Bacterial regulatory protein, Fis family 384 420 5.7E-11 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 Pfam PF00158 Sigma-54 interaction domain 13 179 6.3E-66 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 386 403 4.6E-9 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 403 422 4.6E-9 T 20-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APS56_RS07215 08fea282e68ba6c34b990c847ba1d211 422 SMART SM00382 33 185 2.3E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 SUPERFAMILY SSF56672 1 234 3.11E-64 T 20-04-2016 APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 Pfam PF11799 impB/mucB/samB family C-terminal domain 244 354 5.9E-8 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 PANTHER PTHR11076 1 378 7.6E-146 T 20-04-2016 APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 Gene3D G3DSA:3.30.70.270 66 154 9.0E-21 T 20-04-2016 APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 Gene3D G3DSA:1.10.150.20 174 238 3.2E-11 T 20-04-2016 APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 Gene3D G3DSA:3.30.1490.100 245 355 6.2E-6 T 20-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 Pfam PF00817 impB/mucB/samB family 5 149 1.5E-32 T 20-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 PANTHER PTHR11076:SF40 1 378 7.6E-146 T 20-04-2016 APS56_RS10030 b71cf28c7e185310ffcf6c9bf21557e2 418 Pfam PF13438 Domain of unknown function (DUF4113) 368 417 1.7E-17 T 20-04-2016 IPR025188 Domain of unknown function DUF4113 APS56_RS10610 d74e59024954e1eb839d1ac805ab8115 341 Gene3D G3DSA:2.40.110.10 106 199 9.3E-21 T 20-04-2016 APS56_RS10610 d74e59024954e1eb839d1ac805ab8115 341 Gene3D G3DSA:1.10.540.10 20 95 2.4E-12 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS10610 d74e59024954e1eb839d1ac805ab8115 341 SUPERFAMILY SSF56645 14 199 2.36E-24 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APS56_RS05485 cded66d355d1f72afa5ecfca3f01ca22 234 Pfam PF14289 Domain of unknown function (DUF4369) 15 120 4.8E-15 T 20-04-2016 IPR025380 Domain of unknown function DUF4369 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 PANTHER PTHR18901:SF9 1 211 5.0E-42 T 20-04-2016 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 2.3E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.3E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 2.3E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 2.3E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 PANTHER PTHR18901 1 211 5.0E-42 T 20-04-2016 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 50 183 1.2E-16 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 SUPERFAMILY SSF56784 3 211 2.71E-43 T 20-04-2016 IPR023214 HAD-like domain APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 Gene3D G3DSA:3.40.50.1000 87 210 3.9E-37 T 20-04-2016 IPR023214 HAD-like domain APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 Gene3D G3DSA:3.40.50.1000 2 19 3.9E-37 T 20-04-2016 IPR023214 HAD-like domain APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 Gene3D G3DSA:1.10.150.240 20 84 2.8E-4 T 20-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APS56_RS06715 60209369c008e04a9d84cffefe5c6cb9 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 6.6E-24 T 20-04-2016 IPR023214 HAD-like domain APS56_RS02905 5776ccf062eb6bcfa758291002332159 166 Gene3D G3DSA:3.40.1280.10 9 166 1.1E-43 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS02905 5776ccf062eb6bcfa758291002332159 166 PANTHER PTHR12029 11 166 2.0E-38 T 20-04-2016 APS56_RS02905 5776ccf062eb6bcfa758291002332159 166 SUPERFAMILY SSF75217 5 166 7.19E-36 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS02905 5776ccf062eb6bcfa758291002332159 166 Pfam PF00588 SpoU rRNA Methylase family 17 159 1.3E-29 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APS56_RS02650 c866f9c248d142bdd37b1aeac518ccd7 250 PANTHER PTHR10992:SF771 1 156 5.8E-18 T 20-04-2016 APS56_RS02650 c866f9c248d142bdd37b1aeac518ccd7 250 PANTHER PTHR10992 1 156 5.8E-18 T 20-04-2016 APS56_RS02650 c866f9c248d142bdd37b1aeac518ccd7 250 SUPERFAMILY SSF53474 2 130 3.49E-26 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS02650 c866f9c248d142bdd37b1aeac518ccd7 250 Pfam PF00561 alpha/beta hydrolase fold 18 131 4.2E-10 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS02650 c866f9c248d142bdd37b1aeac518ccd7 250 Gene3D G3DSA:3.40.50.1820 2 127 7.1E-25 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 105 119 3.7E-30 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 359 370 3.7E-30 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 189 211 3.7E-30 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 231 251 3.7E-30 T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 Gene3D G3DSA:3.40.192.10 52 195 1.6E-55 T 20-04-2016 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 SUPERFAMILY SSF53223 20 195 1.38E-62 T 20-04-2016 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 50 174 3.4E-56 T 20-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 113 126 - T 20-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 198 431 8.5E-65 T 20-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 Gene3D G3DSA:3.40.50.720 198 433 3.3E-78 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 PANTHER PTHR11606 52 432 5.1E-160 T 20-04-2016 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 SUPERFAMILY SSF51735 198 433 3.72E-72 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 PIRSF PIRSF000185 15 434 1.4E-154 T 20-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 APS56_RS06290 6eeb8a119a566ea17ec738e0baf6d1b9 434 SMART SM00839 200 431 1.6E-88 T 20-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APS56_RS01500 4ac85a7c50e3aec90cacd0d30d4c8c8b 164 SUPERFAMILY SSF55008 62 128 7.46E-13 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS01500 4ac85a7c50e3aec90cacd0d30d4c8c8b 164 Pfam PF00403 Heavy-metal-associated domain 69 122 1.2E-8 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS01500 4ac85a7c50e3aec90cacd0d30d4c8c8b 164 Gene3D G3DSA:3.30.70.100 58 123 3.4E-13 T 20-04-2016 APS56_RS11845 44cca849577f9744c11de68198fcdb51 108 SUPERFAMILY SSF117916 13 107 1.34E-32 T 20-04-2016 APS56_RS11845 44cca849577f9744c11de68198fcdb51 108 PANTHER PTHR13696 13 105 1.9E-20 T 20-04-2016 APS56_RS11845 44cca849577f9744c11de68198fcdb51 108 PANTHER PTHR13696:SF62 13 105 1.9E-20 T 20-04-2016 APS56_RS11845 44cca849577f9744c11de68198fcdb51 108 Pfam PF01883 Domain of unknown function DUF59 13 86 2.5E-20 T 20-04-2016 IPR002744 Domain of unknown function DUF59 APS56_RS00220 8ed5c9df06f9d9e902fc54e3193b1272 574 Pfam PF09972 Predicted membrane protein (DUF2207) 24 502 7.1E-68 T 20-04-2016 IPR018702 Protein of unknown function DUF2207, membrane APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 Gene3D G3DSA:1.10.1040.10 272 471 5.2E-53 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 PRINTS PR00084 Mannitol dehydrogenase signature 205 218 6.5E-8 T 20-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 PRINTS PR00084 Mannitol dehydrogenase signature 164 177 6.5E-8 T 20-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 PRINTS PR00084 Mannitol dehydrogenase signature 19 29 6.5E-8 T 20-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 PRINTS PR00084 Mannitol dehydrogenase signature 235 250 6.5E-8 T 20-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 PANTHER PTHR30524 2 478 9.8E-192 T 20-04-2016 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 Gene3D G3DSA:3.40.50.720 14 264 1.3E-63 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 SUPERFAMILY SSF51735 13 263 3.27E-62 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 PANTHER PTHR30524:SF1 2 478 9.8E-192 T 20-04-2016 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 453 2.6E-48 T 20-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 18 172 1.1E-20 T 20-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APS56_RS12630 207e5d9d65431d75f5dfc1b99539ae6b 481 SUPERFAMILY SSF48179 273 471 4.42E-40 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 TIGRFAM TIGR00337 PyrG: CTP synthase 6 530 8.2E-238 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 Hamap MF_01227 CTP synthase [pyrG]. 5 535 49.755 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 SUPERFAMILY SSF52317 292 537 1.17E-77 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 Gene3D G3DSA:3.40.50.880 292 537 3.4E-97 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 Pfam PF06418 CTP synthase N-terminus 6 270 3.4E-124 T 20-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 SUPERFAMILY SSF52540 5 272 6.16E-120 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 Pfam PF00117 Glutamine amidotransferase class-I 305 530 3.6E-55 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 PANTHER PTHR11550 1 537 0.0 T 20-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APS56_RS04400 ffa1c97f2e3b9dcc0b1c6c808c25d1fd 546 Gene3D G3DSA:3.40.50.300 4 288 1.7E-131 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12210 e4ed7d1c8bfc5f25c058674bfd2e1ba3 188 Gene3D G3DSA:1.10.340.30 5 185 2.7E-82 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APS56_RS12210 e4ed7d1c8bfc5f25c058674bfd2e1ba3 188 PANTHER PTHR30037:SF4 6 188 2.3E-109 T 20-04-2016 APS56_RS12210 e4ed7d1c8bfc5f25c058674bfd2e1ba3 188 PANTHER PTHR30037 6 188 2.3E-109 T 20-04-2016 APS56_RS12210 e4ed7d1c8bfc5f25c058674bfd2e1ba3 188 SUPERFAMILY SSF48150 5 187 3.14E-82 T 20-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APS56_RS12210 e4ed7d1c8bfc5f25c058674bfd2e1ba3 188 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 6 185 4.2E-73 T 20-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 APS56_RS12210 e4ed7d1c8bfc5f25c058674bfd2e1ba3 188 Pfam PF03352 Methyladenine glycosylase 9 184 6.5E-82 T 20-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 SUPERFAMILY SSF56322 5 464 3.4E-127 T 20-04-2016 IPR005801 ADC synthase GO:0009058 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 PRINTS PR00095 Anthranilate synthase component I signature 303 316 2.3E-15 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 PRINTS PR00095 Anthranilate synthase component I signature 317 330 2.3E-15 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 PRINTS PR00095 Anthranilate synthase component I signature 410 424 2.3E-15 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 PRINTS PR00095 Anthranilate synthase component I signature 395 409 2.3E-15 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 PANTHER PTHR11236:SF9 1 467 1.3E-157 T 20-04-2016 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 Gene3D G3DSA:3.60.120.10 4 466 5.5E-134 T 20-04-2016 IPR005801 ADC synthase GO:0009058 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 162 8.0E-28 T 20-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 Pfam PF00425 chorismate binding enzyme 202 453 2.0E-80 T 20-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APS56_RS14960 fd79e58632eb9368cda8ce6c6b94f7ec 467 PANTHER PTHR11236 1 467 1.3E-157 T 20-04-2016 APS56_RS10530 49d3b78431108b31891e5a387df91482 217 PANTHER PTHR13707 1 215 5.4E-114 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APS56_RS10530 49d3b78431108b31891e5a387df91482 217 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 206 2.5E-96 T 20-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 APS56_RS10530 49d3b78431108b31891e5a387df91482 217 Pfam PF01144 Coenzyme A transferase 5 200 6.5E-42 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APS56_RS10530 49d3b78431108b31891e5a387df91482 217 SUPERFAMILY SSF100950 6 215 1.85E-68 T 20-04-2016 APS56_RS10530 49d3b78431108b31891e5a387df91482 217 Gene3D G3DSA:3.40.810.20 5 207 2.5E-83 T 20-04-2016 APS56_RS10530 49d3b78431108b31891e5a387df91482 217 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 20-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 APS56_RS10530 49d3b78431108b31891e5a387df91482 217 SMART SM00882 5 201 1.8E-69 T 20-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APS56_RS03770 5424496a0604b0f837bb3e68608821da 195 SUPERFAMILY SSF53448 7 186 1.62E-27 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS03770 5424496a0604b0f837bb3e68608821da 195 Pfam PF12804 MobA-like NTP transferase domain 9 158 1.5E-29 T 20-04-2016 IPR025877 MobA-like NTP transferase APS56_RS03770 5424496a0604b0f837bb3e68608821da 195 PANTHER PTHR19136:SF81 1 195 1.5E-34 T 20-04-2016 APS56_RS03770 5424496a0604b0f837bb3e68608821da 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 189 23.566 T 20-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 APS56_RS03770 5424496a0604b0f837bb3e68608821da 195 PANTHER PTHR19136 1 195 1.5E-34 T 20-04-2016 APS56_RS03770 5424496a0604b0f837bb3e68608821da 195 Gene3D G3DSA:3.90.550.10 3 193 1.8E-44 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 Gene3D G3DSA:3.40.720.10 29 269 1.7E-92 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 Gene3D G3DSA:3.40.720.10 311 449 1.7E-92 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 PANTHER PTHR10342:SF207 303 496 2.4E-127 T 20-04-2016 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 PANTHER PTHR10342:SF207 1 178 2.4E-127 T 20-04-2016 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 PANTHER PTHR10342:SF207 215 287 2.4E-127 T 20-04-2016 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 PANTHER PTHR10342 303 496 2.4E-127 T 20-04-2016 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 PANTHER PTHR10342 1 178 2.4E-127 T 20-04-2016 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 PANTHER PTHR10342 215 287 2.4E-127 T 20-04-2016 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 Gene3D G3DSA:3.30.1120.10 450 499 1.1E-11 T 20-04-2016 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 SUPERFAMILY SSF53649 219 499 3.2E-112 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 SUPERFAMILY SSF53649 29 189 3.2E-112 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09900 05bc5830a79c40789cf72062475d65cb 532 Pfam PF00884 Sulfatase 30 409 4.2E-61 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 166 4.0E-26 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 PANTHER PTHR30173:SF21 1 177 1.0E-41 T 20-04-2016 APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 Pfam PF04542 Sigma-70 region 2 21 87 5.8E-14 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 Pfam PF08281 Sigma-70, region 4 115 164 4.1E-15 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 PANTHER PTHR30173 1 177 1.0E-41 T 20-04-2016 APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 Gene3D G3DSA:1.10.1740.10 4 106 4.5E-24 T 20-04-2016 APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 Gene3D G3DSA:1.10.10.10 112 171 2.5E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 SUPERFAMILY SSF88659 106 170 5.23E-18 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS10580 92b18290166124c2a19d20f24b50b0fc 180 SUPERFAMILY SSF88946 3 105 3.53E-22 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS03505 21d58eaec3783fa3cf43d3e42d0f7db5 350 PANTHER PTHR30160:SF1 37 329 3.6E-22 T 20-04-2016 APS56_RS03505 21d58eaec3783fa3cf43d3e42d0f7db5 350 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 117 330 6.3E-8 T 20-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APS56_RS03505 21d58eaec3783fa3cf43d3e42d0f7db5 350 PANTHER PTHR30160 37 329 3.6E-22 T 20-04-2016 APS56_RS03505 21d58eaec3783fa3cf43d3e42d0f7db5 350 Gene3D G3DSA:3.40.50.2000 40 165 6.9E-15 T 20-04-2016 APS56_RS03505 21d58eaec3783fa3cf43d3e42d0f7db5 350 Gene3D G3DSA:3.40.50.2000 211 334 3.0E-14 T 20-04-2016 APS56_RS03505 21d58eaec3783fa3cf43d3e42d0f7db5 350 SUPERFAMILY SSF53756 40 334 2.29E-37 T 20-04-2016 APS56_RS11065 23c05616f6733614c94158ed4c4b8e30 286 SMART SM00849 42 257 1.1E-10 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS11065 23c05616f6733614c94158ed4c4b8e30 286 Gene3D G3DSA:3.60.15.10 3 272 4.3E-43 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS11065 23c05616f6733614c94158ed4c4b8e30 286 PANTHER PTHR23200:SF41 1 284 2.6E-55 T 20-04-2016 APS56_RS11065 23c05616f6733614c94158ed4c4b8e30 286 PANTHER PTHR23200 1 284 2.6E-55 T 20-04-2016 APS56_RS11065 23c05616f6733614c94158ed4c4b8e30 286 SUPERFAMILY SSF56281 1 274 3.14E-36 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS11065 23c05616f6733614c94158ed4c4b8e30 286 Pfam PF00753 Metallo-beta-lactamase superfamily 45 113 4.5E-14 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS16010 dc5e05483d765c3d24fc459a62771608 191 PANTHER PTHR32552:SF23 37 191 5.0E-23 T 20-04-2016 APS56_RS16010 dc5e05483d765c3d24fc459a62771608 191 Pfam PF00665 Integrase core domain 123 187 4.1E-10 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS16010 dc5e05483d765c3d24fc459a62771608 191 Gene3D G3DSA:3.30.420.10 121 182 6.8E-11 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS16010 dc5e05483d765c3d24fc459a62771608 191 PANTHER PTHR32552 37 191 5.0E-23 T 20-04-2016 APS56_RS16010 dc5e05483d765c3d24fc459a62771608 191 SUPERFAMILY SSF53098 120 185 3.03E-13 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS03300 8b5c8aaa62cd0c6ce5e7e63176aa38d6 169 Gene3D G3DSA:2.40.160.20 50 158 5.8E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS03300 8b5c8aaa62cd0c6ce5e7e63176aa38d6 169 SUPERFAMILY SSF56925 39 169 1.78E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 Gene3D G3DSA:3.40.47.10 167 334 4.3E-48 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 334 6.0E-113 T 20-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 334 57.678 T 20-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 Gene3D G3DSA:3.40.47.10 1 166 2.3E-59 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 245 334 1.8E-34 T 20-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 109 190 7.5E-28 T 20-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 PANTHER PTHR34069 1 334 1.6E-111 T 20-04-2016 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 PANTHER PTHR34069:SF2 1 334 1.6E-111 T 20-04-2016 APS56_RS05030 8cb2b63bc51b4af7bde5c71a406585b3 334 SUPERFAMILY SSF53901 4 334 6.58E-63 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS00890 fb1ecf414e1653ab3b0defee06d514e7 199 SUPERFAMILY SSF53448 2 191 4.28E-28 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS00890 fb1ecf414e1653ab3b0defee06d514e7 199 Pfam PF12804 MobA-like NTP transferase domain 5 167 7.2E-29 T 20-04-2016 IPR025877 MobA-like NTP transferase APS56_RS00890 fb1ecf414e1653ab3b0defee06d514e7 199 PANTHER PTHR19136:SF78 2 191 6.4E-34 T 20-04-2016 APS56_RS00890 fb1ecf414e1653ab3b0defee06d514e7 199 Gene3D G3DSA:3.90.550.10 1 191 1.1E-26 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS00890 fb1ecf414e1653ab3b0defee06d514e7 199 PANTHER PTHR19136 2 191 6.4E-34 T 20-04-2016 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 SUPERFAMILY SSF51306 220 328 1.83E-47 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 SUPERFAMILY SSF51306 428 497 1.83E-47 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 SUPERFAMILY SSF51306 140 180 1.83E-47 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PANTHER PTHR12383 111 174 7.4E-45 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PANTHER PTHR12383 262 309 7.4E-45 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PANTHER PTHR12383 224 238 7.4E-45 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PANTHER PTHR12383 428 494 7.4E-45 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 125 293 2.0E-20 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PANTHER PTHR12383:SF14 111 174 7.4E-45 T 20-04-2016 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PANTHER PTHR12383:SF14 262 309 7.4E-45 T 20-04-2016 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PANTHER PTHR12383:SF14 224 238 7.4E-45 T 20-04-2016 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PANTHER PTHR12383:SF14 428 494 7.4E-45 T 20-04-2016 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 Gene3D G3DSA:2.10.109.10 216 274 1.1E-47 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 Gene3D G3DSA:2.10.109.10 438 485 1.1E-47 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 Gene3D G3DSA:2.10.109.10 139 176 1.1E-47 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 438 457 3.5E-8 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 142 158 3.5E-8 T 20-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APS56_RS14480 4f0bbf51eda625a3f84ac358a30615d3 530 Pfam PF00717 Peptidase S24-like 148 288 8.9E-9 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 84 3.0E-12 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 3.9E-31 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 3.9E-31 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 3.9E-31 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 20-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 4.0E-32 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 Gene3D G3DSA:2.40.50.100 20 83 6.8E-29 T 20-04-2016 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 PANTHER PTHR15893 1 85 2.6E-37 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 SUPERFAMILY SSF110324 2 82 2.58E-32 T 20-04-2016 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 Pfam PF01016 Ribosomal L27 protein 2 81 2.3E-34 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11915 873f68e8bfe8e9f426e3161889a07d53 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 25.278 T 20-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 Pfam PF04539 Sigma-70 region 3 135 208 5.3E-17 T 20-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 Gene3D G3DSA:1.10.10.10 217 286 6.0E-29 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 Pfam PF04542 Sigma-70 region 2 56 123 6.3E-18 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 Gene3D G3DSA:1.10.10.10 127 174 6.8E-14 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 Gene3D G3DSA:1.10.601.10 12 123 2.6E-49 T 20-04-2016 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 Pfam PF00140 Sigma-70 factor, region 1.2 17 48 2.3E-14 T 20-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 SUPERFAMILY SSF88659 127 199 1.31E-14 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 PIRSF PIRSF000770 7 284 3.3E-41 T 20-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 275 1.6E-37 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 SUPERFAMILY SSF88946 14 123 8.37E-42 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 Pfam PF04545 Sigma-70, region 4 222 275 3.5E-19 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 SUPERFAMILY SSF88659 188 286 8.6E-26 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 PRINTS PR00046 Major sigma-70 factor signature 247 262 1.4E-25 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 PRINTS PR00046 Major sigma-70 factor signature 262 273 1.4E-25 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 PRINTS PR00046 Major sigma-70 factor signature 226 238 1.4E-25 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 PRINTS PR00046 Major sigma-70 factor signature 102 110 1.4E-25 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14290 7fd7bdfe4ace1410b24828facf748860 287 PRINTS PR00046 Major sigma-70 factor signature 78 91 1.4E-25 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09180 5db5c31390d391846cbe571758048c44 412 TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD 34 408 3.7E-132 T 20-04-2016 IPR026464 Nitrous oxide reductase family maturation protein NosD APS56_RS09180 5db5c31390d391846cbe571758048c44 412 Gene3D G3DSA:2.160.20.10 28 341 3.2E-32 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 283 304 41.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 190 212 2800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 88 116 3400.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 261 282 36.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 213 234 900.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 117 138 4800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 139 167 5400.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 324 349 4300.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 235 260 1400.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00710 168 189 860.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00722 195 363 84.0 T 20-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SMART SM00722 49 188 1.4E-8 T 20-04-2016 IPR006633 Carbohydrate-binding/sugar hydrolysis domain APS56_RS09180 5db5c31390d391846cbe571758048c44 412 Pfam PF05048 Periplasmic copper-binding protein (NosD) 147 367 1.6E-40 T 20-04-2016 IPR007742 Periplasmic copper-binding protein NosD, beta helix domain APS56_RS09180 5db5c31390d391846cbe571758048c44 412 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 162 198 4.8E-6 T 20-04-2016 IPR022441 Parallel beta-helix repeat-2 APS56_RS09180 5db5c31390d391846cbe571758048c44 412 SUPERFAMILY SSF51126 30 395 5.28E-48 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 PANTHER PTHR11689:SF14 8 590 1.7E-80 T 20-04-2016 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 PANTHER PTHR11689 8 590 1.7E-80 T 20-04-2016 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 Gene3D G3DSA:3.10.580.10 461 589 8.0E-15 T 20-04-2016 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 Gene3D G3DSA:1.10.3080.10 15 457 9.6E-78 T 20-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 PRINTS PR00762 Chloride channel signature 166 185 3.3E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 PRINTS PR00762 Chloride channel signature 400 419 3.3E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 PRINTS PR00762 Chloride channel signature 382 398 3.3E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 PRINTS PR00762 Chloride channel signature 115 134 3.3E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 PRINTS PR00762 Chloride channel signature 346 366 3.3E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 SUPERFAMILY SSF54631 459 586 3.79E-16 T 20-04-2016 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 Pfam PF00654 Voltage gated chloride channel 73 431 1.1E-71 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 Pfam PF00571 CBS domain 533 585 0.0057 T 20-04-2016 IPR000644 CBS domain APS56_RS09245 7a27515630c0d23f319f58d684793ae2 597 SUPERFAMILY SSF81340 10 452 1.7E-88 T 20-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 Gene3D G3DSA:3.10.20.30 261 364 6.7E-48 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 85 103 1.3E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 3 23 1.3E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 68 83 1.3E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 24 42 1.3E-35 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 SUPERFAMILY SSF81271 281 360 1.48E-36 T 20-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 364 41.682 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 2.1E-143 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 Pfam PF06071 Protein of unknown function (DUF933) 281 363 1.3E-39 T 20-04-2016 IPR013029 Domain of unknown function DUF933 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 SUPERFAMILY SSF52540 1 302 7.56E-80 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 Gene3D G3DSA:1.10.150.300 129 199 2.4E-22 T 20-04-2016 IPR023192 TGS-like domain APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 PIRSF PIRSF006641 1 364 1.3E-152 T 20-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 PANTHER PTHR23305 1 364 3.1E-188 T 20-04-2016 APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 Gene3D G3DSA:3.40.50.300 200 260 3.9E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 Gene3D G3DSA:3.40.50.300 2 128 3.9E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00725 e20c514c44c94e2822dc6f97f2d17c27 364 Pfam PF01926 50S ribosome-binding GTPase 3 122 1.4E-23 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 PANTHER PTHR11573 808 832 0.0 T 20-04-2016 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 PANTHER PTHR11573 2 765 0.0 T 20-04-2016 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 144 743 1.7E-215 T 20-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 582 604 - T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 422 433 3.8E-58 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 525 548 3.8E-58 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 497 519 3.8E-58 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 593 620 3.8E-58 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 292 311 3.8E-58 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 482 3.8E-58 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 Gene3D G3DSA:3.20.70.20 699 708 1.3E-68 T 20-04-2016 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 Gene3D G3DSA:3.20.70.20 145 338 1.3E-68 T 20-04-2016 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 Gene3D G3DSA:3.20.70.20 388 545 1.3E-68 T 20-04-2016 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 Gene3D G3DSA:3.20.70.20 593 638 1.3E-68 T 20-04-2016 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 SUPERFAMILY SSF51998 214 643 1.74E-188 T 20-04-2016 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 SUPERFAMILY SSF51998 676 752 1.74E-188 T 20-04-2016 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 Pfam PF02867 Ribonucleotide reductase, barrel domain 215 739 2.3E-188 T 20-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 Pfam PF03477 ATP cone domain 1 88 6.8E-17 T 20-04-2016 IPR005144 ATP-cone domain APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 SUPERFAMILY SSF48168 6 213 4.45E-70 T 20-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APS56_RS09375 8427f3f3e76633a43f7f42b648f688f5 832 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 211 8.2E-24 T 20-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 102 1109 3.0E-265 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 PANTHER PTHR11532:SF57 98 475 3.1E-248 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 PANTHER PTHR11532:SF57 590 1107 3.1E-248 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Pfam PF07715 TonB-dependent Receptor Plug Domain 191 296 9.4E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 SUPERFAMILY SSF49464 101 181 5.62E-17 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Pfam PF00593 TonB dependent receptor 691 1107 1.1E-14 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 PANTHER PTHR11532 98 475 3.1E-248 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 PANTHER PTHR11532 590 1107 3.1E-248 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Gene3D G3DSA:2.60.40.1120 102 191 4.0E-12 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Pfam PF13715 CarboxypepD_reg-like domain 102 183 1.6E-18 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 272 302 6.0E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Gene3D G3DSA:2.40.170.20 1032 1109 9.6E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Gene3D G3DSA:2.40.170.20 380 457 9.6E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Gene3D G3DSA:2.40.170.20 943 988 9.6E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Gene3D G3DSA:2.40.170.20 506 860 9.6E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Gene3D G3DSA:2.40.170.20 299 316 9.6E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 SUPERFAMILY SSF56935 511 852 5.95E-91 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 SUPERFAMILY SSF56935 934 978 5.95E-91 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 SUPERFAMILY SSF56935 1022 1085 5.95E-91 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 SUPERFAMILY SSF56935 371 460 5.95E-91 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 SUPERFAMILY SSF56935 179 320 5.95E-91 T 20-04-2016 APS56_RS15775 69e7b88fcd88c8341fdddf67c6a81af2 1109 Gene3D G3DSA:2.170.130.10 192 298 9.6E-23 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS14035 5dac25e662bb3202fd9b50ed0ecb0d13 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 18.021 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APS56_RS14035 5dac25e662bb3202fd9b50ed0ecb0d13 60 PIRSF PIRSF002211 1 60 1.2E-25 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APS56_RS14035 5dac25e662bb3202fd9b50ed0ecb0d13 60 Gene3D G3DSA:3.30.1390.20 1 58 7.1E-28 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APS56_RS14035 5dac25e662bb3202fd9b50ed0ecb0d13 60 PANTHER PTHR15892 1 60 6.1E-20 T 20-04-2016 APS56_RS14035 5dac25e662bb3202fd9b50ed0ecb0d13 60 SUPERFAMILY SSF55129 1 59 8.24E-20 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APS56_RS14035 5dac25e662bb3202fd9b50ed0ecb0d13 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 3.2E-17 T 20-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APS56_RS14035 5dac25e662bb3202fd9b50ed0ecb0d13 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 7.8E-24 T 20-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APS56_RS14035 5dac25e662bb3202fd9b50ed0ecb0d13 60 PANTHER PTHR15892:SF2 1 60 6.1E-20 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 Gene3D G3DSA:2.170.130.10 216 324 5.1E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 Gene3D G3DSA:2.40.170.20 683 1009 4.2E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 Gene3D G3DSA:2.40.170.20 563 632 4.2E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 Gene3D G3DSA:2.40.170.20 325 512 4.2E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 Pfam PF07715 TonB-dependent Receptor Plug Domain 215 321 9.9E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 206 1009 4.1E-142 T 20-04-2016 IPR010104 Bacterial TonB-dependent receptor APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 SUPERFAMILY SSF49464 115 189 1.12E-15 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 PANTHER PTHR30069:SF11 69 944 9.4E-40 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 PANTHER PTHR30069:SF11 985 997 9.4E-40 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 PANTHER PTHR30069 69 944 9.4E-40 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 PANTHER PTHR30069 985 997 9.4E-40 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 Pfam PF00593 TonB dependent receptor 743 1009 3.1E-21 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 Pfam PF13715 CarboxypepD_reg-like domain 117 201 2.7E-18 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 SUPERFAMILY SSF56935 216 507 1.54E-76 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 SUPERFAMILY SSF56935 680 1002 1.54E-76 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 SUPERFAMILY SSF56935 554 622 1.54E-76 T 20-04-2016 APS56_RS15030 5854dc11df8bf77c89a84be2ccde4ec0 1020 Gene3D G3DSA:2.60.40.1120 115 189 3.8E-17 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 Pfam PF03422 Carbohydrate binding module (family 6) 681 802 7.1E-30 T 20-04-2016 IPR005084 Carbohydrate binding module family 6 GO:0030246 APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 819 893 1.0E-13 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 Gene3D G3DSA:2.60.120.260 679 803 1.4E-35 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 Gene3D G3DSA:3.80.10.10 90 173 1.1E-5 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 Pfam PF13306 Leucine rich repeats (6 copies) 88 197 2.2E-16 T 20-04-2016 IPR026906 Leucine rich repeat 5 APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 SUPERFAMILY SSF51126 493 571 3.92E-6 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 SUPERFAMILY SSF51126 259 451 3.92E-6 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 SMART SM00606 674 803 3.9E-33 T 20-04-2016 IPR006584 Cellulose binding, type IV GO:0030246 APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 SUPERFAMILY SSF49785 678 802 5.44E-25 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS05955 022403b268a0cc9d8022a7ace19d923c 894 SUPERFAMILY SSF52058 90 197 1.64E-10 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS08500 a98eefc1ca2f5ce47d4adae28c1856ac 156 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 4 145 2.0E-19 T 20-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APS56_RS08500 a98eefc1ca2f5ce47d4adae28c1856ac 156 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 156 38.631 T 20-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APS56_RS08500 a98eefc1ca2f5ce47d4adae28c1856ac 156 Pfam PF02381 MraZ protein, putative antitoxin-like 5 76 6.3E-11 T 20-04-2016 IPR020603 MraZ domain APS56_RS08500 a98eefc1ca2f5ce47d4adae28c1856ac 156 Pfam PF02381 MraZ protein, putative antitoxin-like 81 142 6.6E-11 T 20-04-2016 IPR020603 MraZ domain APS56_RS08500 a98eefc1ca2f5ce47d4adae28c1856ac 156 SUPERFAMILY SSF89447 3 143 4.49E-41 T 20-04-2016 APS56_RS08500 a98eefc1ca2f5ce47d4adae28c1856ac 156 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 4 146 5.1E-32 T 20-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APS56_RS08500 a98eefc1ca2f5ce47d4adae28c1856ac 156 PANTHER PTHR34701 4 153 2.2E-39 T 20-04-2016 APS56_RS03500 4cc5d9d5904032b3348bc3f814c435ea 293 Pfam PF00795 Carbon-nitrogen hydrolase 5 270 8.8E-54 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS03500 4cc5d9d5904032b3348bc3f814c435ea 293 SUPERFAMILY SSF56317 1 289 1.22E-83 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS03500 4cc5d9d5904032b3348bc3f814c435ea 293 Gene3D G3DSA:3.60.110.10 1 289 2.3E-98 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS03500 4cc5d9d5904032b3348bc3f814c435ea 293 PANTHER PTHR23088 1 290 1.0E-129 T 20-04-2016 APS56_RS03500 4cc5d9d5904032b3348bc3f814c435ea 293 PANTHER PTHR23088:SF11 1 290 1.0E-129 T 20-04-2016 APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 PIRSF PIRSF000386 1 225 2.1E-92 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 1.6E-54 T 20-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 Gene3D G3DSA:3.40.1280.10 1 159 3.3E-64 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 PANTHER PTHR32125 1 225 2.1E-92 T 20-04-2016 APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 225 93.526 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 SUPERFAMILY SSF75217 1 224 2.42E-89 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 224 1.9E-85 T 20-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 PANTHER PTHR32125:SF1 1 225 2.1E-92 T 20-04-2016 APS56_RS01300 50f536f57a18a7caded24c0cdf153219 225 Gene3D G3DSA:1.10.1270.20 160 224 1.3E-24 T 20-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APS56_RS00645 bbd223c015b3055447575dfa0cab5621 456 Gene3D G3DSA:3.30.420.40 6 237 7.7E-23 T 20-04-2016 APS56_RS00645 bbd223c015b3055447575dfa0cab5621 456 SUPERFAMILY SSF53067 8 236 2.12E-25 T 20-04-2016 APS56_RS00645 bbd223c015b3055447575dfa0cab5621 456 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 212 1.4E-18 T 20-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APS56_RS00645 bbd223c015b3055447575dfa0cab5621 456 SUPERFAMILY SSF53067 313 429 6.37E-10 T 20-04-2016 APS56_RS00645 bbd223c015b3055447575dfa0cab5621 456 SUPERFAMILY SSF53067 229 283 6.37E-10 T 20-04-2016 APS56_RS00645 bbd223c015b3055447575dfa0cab5621 456 SUPERFAMILY SSF53067 8 90 6.37E-10 T 20-04-2016 APS56_RS00645 bbd223c015b3055447575dfa0cab5621 456 PANTHER PTHR10196 8 256 6.6E-21 T 20-04-2016 APS56_RS05430 f2c59c95841d70fa1b9491f8d796aefe 190 PANTHER PTHR12213 1 186 3.4E-76 T 20-04-2016 APS56_RS05430 f2c59c95841d70fa1b9491f8d796aefe 190 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 185 9.0E-43 T 20-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APS56_RS05430 f2c59c95841d70fa1b9491f8d796aefe 190 Gene3D G3DSA:1.20.1200.10 12 189 1.5E-58 T 20-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APS56_RS05430 f2c59c95841d70fa1b9491f8d796aefe 190 SUPERFAMILY SSF89028 1 186 1.96E-57 T 20-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APS56_RS05430 f2c59c95841d70fa1b9491f8d796aefe 190 Pfam PF01923 Cobalamin adenosyltransferase 3 173 3.3E-58 T 20-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 APS56_RS05430 f2c59c95841d70fa1b9491f8d796aefe 190 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 181 8.2E-52 T 20-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.4E-31 T 20-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 20.876 T 20-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 PANTHER PTHR23321 1 88 2.5E-32 T 20-04-2016 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 2.0E-28 T 20-04-2016 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 Gene3D G3DSA:1.10.287.10 2 89 3.6E-36 T 20-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 Pfam PF00312 Ribosomal protein S15 8 88 4.6E-31 T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 SMART SM01387 8 88 9.8E-41 T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 SUPERFAMILY SSF47060 2 89 2.62E-31 T 20-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APS56_RS14305 6bf973b4b0467f1da1702d3f1e6e3b1d 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 20-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 Gene3D G3DSA:3.40.50.620 5 179 4.4E-22 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 SMART SM00977 366 438 3.9E-20 T 20-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 Pfam PF01171 PP-loop family 20 196 3.2E-47 T 20-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 366 412 1.0E-5 T 20-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 SUPERFAMILY SSF56037 350 438 1.07E-12 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 PANTHER PTHR11807:SF2 1 438 3.4E-72 T 20-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 200 1.7E-53 T 20-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 2 301 22.605 T 20-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 SUPERFAMILY SSF52402 5 205 2.12E-56 T 20-04-2016 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 Pfam PF11734 TilS substrate C-terminal domain 366 435 6.2E-5 T 20-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APS56_RS00860 f053c9e238dd86b20b80e0a282021a15 441 PANTHER PTHR11807 1 438 3.4E-72 T 20-04-2016 APS56_RS12345 b8039af8ca33b0753be2663447ac8eca 336 SUPERFAMILY SSF51735 2 273 1.31E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12345 b8039af8ca33b0753be2663447ac8eca 336 SUPERFAMILY SSF51735 301 333 1.31E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12345 b8039af8ca33b0753be2663447ac8eca 336 Gene3D G3DSA:3.40.50.720 1 325 6.0E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12345 b8039af8ca33b0753be2663447ac8eca 336 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 229 6.6E-28 T 20-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APS56_RS12345 b8039af8ca33b0753be2663447ac8eca 336 PANTHER PTHR10366:SF338 1 262 3.8E-62 T 20-04-2016 APS56_RS12345 b8039af8ca33b0753be2663447ac8eca 336 PANTHER PTHR10366 1 262 3.8E-62 T 20-04-2016 APS56_RS04930 f97b69e93bc4d522d940f72ea0c51d0a 91 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 83 1.2E-18 T 20-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 APS56_RS04930 f97b69e93bc4d522d940f72ea0c51d0a 91 Gene3D G3DSA:3.30.1390.10 2 89 5.8E-20 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APS56_RS04930 f97b69e93bc4d522d940f72ea0c51d0a 91 SUPERFAMILY SSF54736 21 90 3.19E-17 T 20-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 SMART SM00450 153 272 2.0E-18 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 SMART SM00450 11 129 2.4E-13 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 Gene3D G3DSA:3.40.250.10 8 149 1.2E-29 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 SUPERFAMILY SSF52821 8 149 2.62E-29 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 Gene3D G3DSA:3.40.250.10 151 268 1.9E-32 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 Pfam PF00581 Rhodanese-like domain 158 267 5.1E-11 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 Pfam PF00581 Rhodanese-like domain 13 125 1.1E-12 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 PANTHER PTHR11364 1 272 4.6E-86 T 20-04-2016 APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 PANTHER PTHR11364:SF13 1 272 4.6E-86 T 20-04-2016 APS56_RS02335 5dbf4271d9f9e8af5bd1109004ec48b6 272 SUPERFAMILY SSF52821 156 268 1.83E-27 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS08940 0dd1b74bf04bc702a2d05eddfbff650b 451 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 381 451 2.1E-14 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS08940 0dd1b74bf04bc702a2d05eddfbff650b 451 Pfam PF00932 Lamin Tail Domain 193 324 2.0E-13 T 20-04-2016 IPR001322 Lamin Tail Domain APS56_RS08940 0dd1b74bf04bc702a2d05eddfbff650b 451 Pfam PF00932 Lamin Tail Domain 43 141 7.1E-10 T 20-04-2016 IPR001322 Lamin Tail Domain APS56_RS08940 0dd1b74bf04bc702a2d05eddfbff650b 451 SUPERFAMILY SSF74853 50 140 1.11E-8 T 20-04-2016 IPR001322 Lamin Tail Domain APS56_RS08940 0dd1b74bf04bc702a2d05eddfbff650b 451 SUPERFAMILY SSF74853 220 318 2.62E-5 T 20-04-2016 IPR001322 Lamin Tail Domain APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 Pfam PF01120 Alpha-L-fucosidase 31 406 2.7E-82 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 Gene3D G3DSA:3.20.20.80 252 409 5.3E-81 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 Gene3D G3DSA:3.20.20.80 39 218 5.3E-81 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 SUPERFAMILY SSF51445 45 215 2.04E-72 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 SUPERFAMILY SSF51445 249 409 2.04E-72 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 PANTHER PTHR10030:SF25 1 213 1.2E-49 T 20-04-2016 APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 PANTHER PTHR10030:SF25 246 422 1.2E-49 T 20-04-2016 APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 Gene3D G3DSA:2.60.40.1180 461 538 1.1E-9 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 SMART SM00812 38 489 1.9E-101 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 PANTHER PTHR10030 1 213 1.2E-49 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS03025 4f108a7395d3de95d3b74bee25a53b8a 543 PANTHER PTHR10030 246 422 1.2E-49 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS07645 2ca7c39a6da59f69c62a1189e2cad69e 338 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 62 192 1.3E-63 T 20-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 APS56_RS07645 2ca7c39a6da59f69c62a1189e2cad69e 338 Gene3D G3DSA:1.10.8.300 227 334 3.1E-36 T 20-04-2016 APS56_RS07645 2ca7c39a6da59f69c62a1189e2cad69e 338 SUPERFAMILY SSF52540 30 309 1.01E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07645 2ca7c39a6da59f69c62a1189e2cad69e 338 PANTHER PTHR11603 19 338 3.2E-132 T 20-04-2016 APS56_RS07645 2ca7c39a6da59f69c62a1189e2cad69e 338 PANTHER PTHR11603:SF148 19 338 3.2E-132 T 20-04-2016 APS56_RS07645 2ca7c39a6da59f69c62a1189e2cad69e 338 PIRSF PIRSF002849 2 338 7.3E-133 T 20-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted APS56_RS07645 2ca7c39a6da59f69c62a1189e2cad69e 338 Gene3D G3DSA:3.40.50.300 44 209 1.9E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 Gene3D G3DSA:1.10.10.10 115 179 1.6E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 SUPERFAMILY SSF88659 128 183 2.62E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 24 178 2.9E-41 T 20-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 Pfam PF08281 Sigma-70, region 4 128 174 1.5E-12 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 Pfam PF04542 Sigma-70 region 2 29 93 4.7E-9 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 PANTHER PTHR30173:SF20 1 192 2.1E-41 T 20-04-2016 APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 SUPERFAMILY SSF88946 7 103 9.81E-19 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 177 4.2E-25 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 PANTHER PTHR30173 1 192 2.1E-41 T 20-04-2016 APS56_RS03930 2b74f34dfb413ab715773d20681a8384 192 Gene3D G3DSA:1.10.1740.10 8 114 5.5E-18 T 20-04-2016 APS56_RS02185 030471f041e220e8d8adf5c8ad2796b3 340 PANTHER PTHR22916:SF24 1 268 1.2E-48 T 20-04-2016 APS56_RS02185 030471f041e220e8d8adf5c8ad2796b3 340 PANTHER PTHR22916 1 268 1.2E-48 T 20-04-2016 APS56_RS02185 030471f041e220e8d8adf5c8ad2796b3 340 Gene3D G3DSA:3.90.550.10 1 204 3.3E-47 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS02185 030471f041e220e8d8adf5c8ad2796b3 340 Pfam PF00535 Glycosyl transferase family 2 4 167 3.1E-33 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS02185 030471f041e220e8d8adf5c8ad2796b3 340 SUPERFAMILY SSF53448 2 234 2.72E-46 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS15435 a5c317e97f824901bcfd6a92549485b1 273 Gene3D G3DSA:3.30.1330.30 9 112 9.4E-26 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APS56_RS15435 a5c317e97f824901bcfd6a92549485b1 273 Pfam PF00588 SpoU rRNA Methylase family 125 263 2.6E-36 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APS56_RS15435 a5c317e97f824901bcfd6a92549485b1 273 PANTHER PTHR12029:SF61 1 270 3.5E-79 T 20-04-2016 APS56_RS15435 a5c317e97f824901bcfd6a92549485b1 273 PANTHER PTHR12029 1 270 3.5E-79 T 20-04-2016 APS56_RS15435 a5c317e97f824901bcfd6a92549485b1 273 SUPERFAMILY SSF75217 115 272 7.85E-43 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS15435 a5c317e97f824901bcfd6a92549485b1 273 SMART SM00967 33 113 0.0017 T 20-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APS56_RS15435 a5c317e97f824901bcfd6a92549485b1 273 SUPERFAMILY SSF55315 3 108 2.59E-16 T 20-04-2016 IPR029064 50S ribosomal protein L30e-like APS56_RS15435 a5c317e97f824901bcfd6a92549485b1 273 Gene3D G3DSA:3.40.1280.10 121 271 1.9E-46 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS02395 5a54f459e6fb3529d15956e7c1204459 231 PANTHER PTHR11079:SF83 12 228 1.7E-69 T 20-04-2016 APS56_RS02395 5a54f459e6fb3529d15956e7c1204459 231 Pfam PF00849 RNA pseudouridylate synthase 19 174 1.1E-34 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS02395 5a54f459e6fb3529d15956e7c1204459 231 SUPERFAMILY SSF55120 11 224 1.33E-53 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS02395 5a54f459e6fb3529d15956e7c1204459 231 PANTHER PTHR11079 12 228 1.7E-69 T 20-04-2016 APS56_RS02395 5a54f459e6fb3529d15956e7c1204459 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 64 78 - T 20-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 PIRSF PIRSF000105 1 296 1.3E-90 T 20-04-2016 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3 182 3.9E-63 T 20-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 PANTHER PTHR23309 1 290 1.1E-139 T 20-04-2016 APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 SUPERFAMILY SSF48179 184 287 2.38E-33 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 SUPERFAMILY SSF51735 1 184 1.45E-59 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 185 281 1.1E-33 T 20-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 182 207 - T 20-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 Gene3D G3DSA:3.40.50.720 1 186 5.2E-62 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00790 f7128e08926b5f87775a4286360ac093 299 Gene3D G3DSA:1.10.1040.10 187 282 1.6E-34 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 Gene3D G3DSA:1.10.10.60 212 265 2.0E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 Pfam PF12833 Helix-turn-helix domain 234 312 2.4E-20 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 SMART SM00342 228 311 5.0E-22 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 295 311 9.5E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 295 9.5E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 PANTHER PTHR11019 37 308 3.4E-28 T 20-04-2016 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 SUPERFAMILY SSF46689 212 262 7.08E-5 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 SUPERFAMILY SSF46689 264 310 6.27E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 Gene3D G3DSA:1.10.10.60 266 309 7.5E-16 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS12015 e883b03611e9333479fb972897441ce5 313 PANTHER PTHR11019:SF61 37 308 3.4E-28 T 20-04-2016 APS56_RS12245 8b59a501fc30d2b87f6c044c5db6878f 292 Pfam PF02687 FtsX-like permease family 169 278 2.9E-9 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS12245 8b59a501fc30d2b87f6c044c5db6878f 292 PIRSF PIRSF003097 2 285 3.2E-79 T 20-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APS56_RS11750 12107fbdf14fa71262545d3eccce6296 626 Gene3D G3DSA:2.60.40.10 203 289 5.0E-6 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS11750 12107fbdf14fa71262545d3eccce6296 626 SUPERFAMILY SSF50242 31 79 1.57E-5 T 20-04-2016 IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold APS56_RS11750 12107fbdf14fa71262545d3eccce6296 626 Gene3D G3DSA:2.40.50.120 27 115 2.2E-5 T 20-04-2016 APS56_RS11750 12107fbdf14fa71262545d3eccce6296 626 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 552 625 2.5E-14 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS11750 12107fbdf14fa71262545d3eccce6296 626 Gene3D G3DSA:3.40.390.10 336 496 6.9E-9 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS11750 12107fbdf14fa71262545d3eccce6296 626 SUPERFAMILY SSF55486 347 498 6.55E-8 T 20-04-2016 APS56_RS05190 4d8d3fab6f3bb298bc034a130eed9bae 246 SMART SM00382 27 214 4.7E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS05190 4d8d3fab6f3bb298bc034a130eed9bae 246 Gene3D G3DSA:3.40.50.300 2 232 1.3E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05190 4d8d3fab6f3bb298bc034a130eed9bae 246 Pfam PF00005 ABC transporter 18 164 2.9E-34 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS05190 4d8d3fab6f3bb298bc034a130eed9bae 246 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 239 1.7E-111 T 20-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 APS56_RS05190 4d8d3fab6f3bb298bc034a130eed9bae 246 PANTHER PTHR24220 4 236 4.0E-139 T 20-04-2016 APS56_RS05190 4d8d3fab6f3bb298bc034a130eed9bae 246 PANTHER PTHR24220:SF497 4 236 4.0E-139 T 20-04-2016 APS56_RS05190 4d8d3fab6f3bb298bc034a130eed9bae 246 SUPERFAMILY SSF52540 2 235 4.26E-64 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15970 0d807d55cde1fa7bbac36f3ef7173b7f 1234 Pfam PF12128 Protein of unknown function (DUF3584) 18 882 3.4E-50 T 20-04-2016 IPR021979 Protein of unknown function DUF3584 APS56_RS15970 0d807d55cde1fa7bbac36f3ef7173b7f 1234 Pfam PF12128 Protein of unknown function (DUF3584) 1078 1194 1.7E-8 T 20-04-2016 IPR021979 Protein of unknown function DUF3584 APS56_RS15970 0d807d55cde1fa7bbac36f3ef7173b7f 1234 Gene3D G3DSA:3.40.50.300 21 59 4.1E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15970 0d807d55cde1fa7bbac36f3ef7173b7f 1234 Gene3D G3DSA:3.40.50.300 1102 1186 4.1E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.40.170.20 333 457 6.2E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.40.170.20 567 698 6.2E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.40.170.20 232 298 6.2E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.40.170.20 986 1032 6.2E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.40.170.20 490 535 6.2E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.40.170.20 1065 1092 6.2E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.40.170.20 734 927 6.2E-35 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 PANTHER PTHR30069:SF6 709 1033 1.4E-159 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 PANTHER PTHR30069:SF6 3 682 1.4E-159 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Pfam PF13620 Carboxypeptidase regulatory-like domain 29 108 2.1E-15 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 SUPERFAMILY SSF49464 28 118 1.08E-11 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.60.40.1120 30 114 1.7E-8 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 Gene3D G3DSA:2.170.130.10 115 231 3.1E-5 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 PANTHER PTHR30069 709 1033 1.4E-159 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 PANTHER PTHR30069 3 682 1.4E-159 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 SUPERFAMILY SSF56935 630 677 6.72E-45 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 SUPERFAMILY SSF56935 978 1045 6.72E-45 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 SUPERFAMILY SSF56935 351 602 6.72E-45 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 SUPERFAMILY SSF56935 915 932 6.72E-45 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 SUPERFAMILY SSF56935 117 310 6.72E-45 T 20-04-2016 APS56_RS12160 30a03a3ed835bb28943d8873df9256f5 1094 SUPERFAMILY SSF56935 727 858 6.72E-45 T 20-04-2016 APS56_RS15640 84a801043da014f4fb4da9e9848f2d5f 237 Gene3D G3DSA:3.40.50.2300 1 115 3.9E-21 T 20-04-2016 APS56_RS15640 84a801043da014f4fb4da9e9848f2d5f 237 SUPERFAMILY SSF52172 2 115 1.99E-21 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS15640 84a801043da014f4fb4da9e9848f2d5f 237 Pfam PF00072 Response regulator receiver domain 4 109 2.9E-17 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15640 84a801043da014f4fb4da9e9848f2d5f 237 PANTHER PTHR26402 1 110 2.2E-22 T 20-04-2016 APS56_RS15640 84a801043da014f4fb4da9e9848f2d5f 237 Pfam PF04397 LytTr DNA-binding domain 145 234 9.1E-19 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS15640 84a801043da014f4fb4da9e9848f2d5f 237 SMART SM00850 144 235 1.6E-25 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS15640 84a801043da014f4fb4da9e9848f2d5f 237 SMART SM00448 1 110 2.3E-16 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15640 84a801043da014f4fb4da9e9848f2d5f 237 Gene3D G3DSA:2.40.50.40 138 204 6.4E-20 T 20-04-2016 APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 PANTHER PTHR11069:SF12 27 474 4.1E-100 T 20-04-2016 APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 PANTHER PTHR11069 27 474 4.1E-100 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 Gene3D G3DSA:2.60.40.1180 410 464 6.4E-10 T 20-04-2016 IPR013780 Glycosyl hydrolase, all-beta APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 SUPERFAMILY SSF51445 67 416 1.09E-71 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 Gene3D G3DSA:3.20.20.80 53 409 9.4E-113 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 PRINTS PR00843 Glycosyl hydrolase family 30 signature 57 77 3.6E-7 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 PRINTS PR00843 Glycosyl hydrolase family 30 signature 93 119 3.6E-7 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 PRINTS PR00843 Glycosyl hydrolase family 30 signature 121 149 3.6E-7 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS02975 bb969837d8372d11fda1dcc9284a5e9a 478 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 67 412 1.4E-38 T 20-04-2016 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain APS56_RS02890 1f6b538ea0c703908d39f838acf680b1 212 Pfam PF13616 PPIC-type PPIASE domain 85 176 2.6E-15 T 20-04-2016 APS56_RS02890 1f6b538ea0c703908d39f838acf680b1 212 SUPERFAMILY SSF54534 97 179 5.36E-10 T 20-04-2016 APS56_RS02890 1f6b538ea0c703908d39f838acf680b1 212 Gene3D G3DSA:3.10.50.40 96 168 6.3E-12 T 20-04-2016 APS56_RS00480 1107b48ae009336e4712b8bf6ecc5ab1 288 PANTHER PTHR35092:SF1 1 280 6.3E-45 T 20-04-2016 APS56_RS00480 1107b48ae009336e4712b8bf6ecc5ab1 288 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 4 270 1.9E-66 T 20-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase APS56_RS00480 1107b48ae009336e4712b8bf6ecc5ab1 288 SUPERFAMILY SSF102522 1 151 2.35E-38 T 20-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal APS56_RS00480 1107b48ae009336e4712b8bf6ecc5ab1 288 PANTHER PTHR35092 1 280 6.3E-45 T 20-04-2016 APS56_RS00480 1107b48ae009336e4712b8bf6ecc5ab1 288 PIRSF PIRSF006779 1 276 3.1E-59 T 20-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase APS56_RS00480 1107b48ae009336e4712b8bf6ecc5ab1 288 Gene3D G3DSA:2.40.30.90 161 275 6.9E-22 T 20-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal APS56_RS00480 1107b48ae009336e4712b8bf6ecc5ab1 288 SUPERFAMILY SSF101852 164 260 4.05E-12 T 20-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 Gene3D G3DSA:4.10.910.10 72 123 1.5E-26 T 20-04-2016 IPR027437 30s ribosomal protein S13, C-terminal APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 Pfam PF00416 Ribosomal protein S13/S18 3 62 3.5E-14 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 Pfam PF00416 Ribosomal protein S13/S18 63 108 3.3E-17 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 SUPERFAMILY SSF46946 2 114 2.09E-42 T 20-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.9E-51 T 20-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 Gene3D G3DSA:1.10.8.50 1 70 1.2E-28 T 20-04-2016 APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 PIRSF PIRSF002134 1 124 3.3E-40 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 20-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.174 T 20-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14055 4a29a7fbfd3ee200bf6c5d89177d5f8d 124 PANTHER PTHR10871 1 122 1.4E-62 T 20-04-2016 APS56_RS01595 70f23563f7da51441f4997b5b43f4fab 216 Pfam PF01694 Rhomboid family 39 186 9.8E-28 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS01595 70f23563f7da51441f4997b5b43f4fab 216 PANTHER PTHR22936 6 187 3.9E-23 T 20-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APS56_RS01595 70f23563f7da51441f4997b5b43f4fab 216 Gene3D G3DSA:1.20.1540.10 6 187 2.9E-31 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS01595 70f23563f7da51441f4997b5b43f4fab 216 SUPERFAMILY SSF144091 4 186 3.66E-34 T 20-04-2016 APS56_RS07385 22c590cae71975ff401abcf3c7f6bdaa 193 Pfam PF13241 Putative NAD(P)-binding 9 119 1.8E-27 T 20-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APS56_RS07385 22c590cae71975ff401abcf3c7f6bdaa 193 SUPERFAMILY SSF75615 113 186 1.18E-17 T 20-04-2016 APS56_RS07385 22c590cae71975ff401abcf3c7f6bdaa 193 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 7 176 1.7E-36 T 20-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APS56_RS07385 22c590cae71975ff401abcf3c7f6bdaa 193 PANTHER PTHR35330 4 171 8.9E-42 T 20-04-2016 APS56_RS07385 22c590cae71975ff401abcf3c7f6bdaa 193 Gene3D G3DSA:3.30.160.110 118 153 5.2E-12 T 20-04-2016 APS56_RS07385 22c590cae71975ff401abcf3c7f6bdaa 193 SUPERFAMILY SSF51735 6 118 3.7E-19 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07385 22c590cae71975ff401abcf3c7f6bdaa 193 Gene3D G3DSA:3.40.50.720 5 117 3.4E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07385 22c590cae71975ff401abcf3c7f6bdaa 193 Pfam PF14824 Sirohaem biosynthesis protein central 125 148 6.6E-8 T 20-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APS56_RS00830 74cebc657d95a544cb20a344cc3f9bfc 275 Pfam PF00924 Mechanosensitive ion channel 162 272 3.3E-9 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APS56_RS00830 74cebc657d95a544cb20a344cc3f9bfc 275 Gene3D G3DSA:2.30.30.60 227 271 4.7E-5 T 20-04-2016 APS56_RS00830 74cebc657d95a544cb20a344cc3f9bfc 275 SUPERFAMILY SSF82861 120 211 7.19E-5 T 20-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APS56_RS00830 74cebc657d95a544cb20a344cc3f9bfc 275 Pfam PF05552 Conserved TM helix 14 58 4.3E-10 T 20-04-2016 IPR008910 Conserved TM helix APS56_RS00830 74cebc657d95a544cb20a344cc3f9bfc 275 Pfam PF05552 Conserved TM helix 114 152 5.1E-9 T 20-04-2016 IPR008910 Conserved TM helix APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 289 9.4E-66 T 20-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 268 276 - T 20-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 74 99 - T 20-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 SUPERFAMILY SSF51735 121 289 1.58E-47 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 Gene3D G3DSA:3.40.50.720 138 272 4.8E-54 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 3 119 6.5E-40 T 20-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 PANTHER PTHR10025 2 291 7.4E-174 T 20-04-2016 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 SUPERFAMILY SSF53223 1 120 1.25E-39 T 20-04-2016 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 Gene3D G3DSA:3.40.192.10 5 137 2.7E-48 T 20-04-2016 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 291 37.885 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 206 235 1.1E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 1.1E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 264 282 1.1E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 1.1E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 1.1E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 247 263 1.1E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS14170 c6898ea509cb663c40ed6bf2f8663a68 292 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 153 173 1.1E-80 T 20-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APS56_RS00955 5a2dea4d7642be4b17ae092c34f84932 405 PANTHER PTHR30273 169 402 9.2E-63 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS00955 5a2dea4d7642be4b17ae092c34f84932 405 PANTHER PTHR30273:SF2 169 402 9.2E-63 T 20-04-2016 APS56_RS00955 5a2dea4d7642be4b17ae092c34f84932 405 Pfam PF16344 Domain of unknown function (DUF4974) 302 400 3.7E-23 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS00955 5a2dea4d7642be4b17ae092c34f84932 405 Pfam PF04773 FecR protein 199 289 1.9E-14 T 20-04-2016 IPR006860 FecR protein APS56_RS15825 28c6acb557065624afcb8bcb813a003c 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-13 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS15825 28c6acb557065624afcb8bcb813a003c 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-13 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS15825 28c6acb557065624afcb8bcb813a003c 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-13 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS15825 28c6acb557065624afcb8bcb813a003c 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-34 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APS56_RS15825 28c6acb557065624afcb8bcb813a003c 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 4.3E-31 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS15825 28c6acb557065624afcb8bcb813a003c 90 SUPERFAMILY SSF47729 1 90 1.07E-28 T 20-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APS56_RS15825 28c6acb557065624afcb8bcb813a003c 90 PANTHER PTHR33175 1 90 4.8E-38 T 20-04-2016 APS56_RS15825 28c6acb557065624afcb8bcb813a003c 90 SMART SM00411 1 90 1.5E-36 T 20-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APS56_RS11510 06615ca3e5e22b21874636973c7e56b0 288 PANTHER PTHR33608:SF5 1 287 4.6E-82 T 20-04-2016 APS56_RS11510 06615ca3e5e22b21874636973c7e56b0 288 PANTHER PTHR33608 1 287 4.6E-82 T 20-04-2016 APS56_RS11510 06615ca3e5e22b21874636973c7e56b0 288 SUPERFAMILY SSF53300 75 237 1.51E-15 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11510 06615ca3e5e22b21874636973c7e56b0 288 Pfam PF01882 Protein of unknown function DUF58 37 122 3.6E-22 T 20-04-2016 IPR002881 Domain of unknown function DUF58 APS56_RS11510 06615ca3e5e22b21874636973c7e56b0 288 Gene3D G3DSA:3.40.50.410 78 188 3.6E-7 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS03095 9534905e3286af992d1d117290e1a887 236 SMART SM00850 141 232 2.3E-22 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS03095 9534905e3286af992d1d117290e1a887 236 Pfam PF00072 Response regulator receiver domain 6 111 4.5E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS03095 9534905e3286af992d1d117290e1a887 236 PANTHER PTHR26402 3 117 1.0E-25 T 20-04-2016 APS56_RS03095 9534905e3286af992d1d117290e1a887 236 SUPERFAMILY SSF52172 3 123 8.54E-27 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS03095 9534905e3286af992d1d117290e1a887 236 SMART SM00448 3 111 8.8E-20 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS03095 9534905e3286af992d1d117290e1a887 236 Gene3D G3DSA:3.40.50.2300 1 122 9.4E-27 T 20-04-2016 APS56_RS03095 9534905e3286af992d1d117290e1a887 236 Gene3D G3DSA:2.40.50.40 133 201 4.6E-18 T 20-04-2016 APS56_RS03095 9534905e3286af992d1d117290e1a887 236 Pfam PF04397 LytTr DNA-binding domain 142 231 2.1E-15 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS15480 74b03632260ba26552568238d89c269f 493 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 22 341 6.0E-97 T 20-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APS56_RS15480 74b03632260ba26552568238d89c269f 493 PANTHER PTHR10890 8 489 4.9E-176 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APS56_RS15480 74b03632260ba26552568238d89c269f 493 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 10 490 8.1E-134 T 20-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APS56_RS15480 74b03632260ba26552568238d89c269f 493 SUPERFAMILY SSF47323 364 491 6.54E-31 T 20-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS15480 74b03632260ba26552568238d89c269f 493 SUPERFAMILY SSF52374 10 340 1.96E-78 T 20-04-2016 APS56_RS15480 74b03632260ba26552568238d89c269f 493 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 9 493 34.441 T 20-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APS56_RS15480 74b03632260ba26552568238d89c269f 493 Gene3D G3DSA:3.40.50.620 26 333 1.9E-90 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS15480 74b03632260ba26552568238d89c269f 493 Gene3D G3DSA:1.20.120.640 336 430 4.2E-16 T 20-04-2016 APS56_RS15480 74b03632260ba26552568238d89c269f 493 Pfam PF09190 DALR domain 376 431 1.0E-10 T 20-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APS56_RS15480 74b03632260ba26552568238d89c269f 493 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 243 264 3.2E-24 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APS56_RS15480 74b03632260ba26552568238d89c269f 493 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 68 77 3.2E-24 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APS56_RS15480 74b03632260ba26552568238d89c269f 493 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 32 43 3.2E-24 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APS56_RS15480 74b03632260ba26552568238d89c269f 493 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 212 230 3.2E-24 T 20-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APS56_RS15480 74b03632260ba26552568238d89c269f 493 SMART SM00840 374 440 3.5E-12 T 20-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APS56_RS14590 c71cb4898e962251bd46e8606a47c2dd 204 Gene3D G3DSA:1.10.357.10 4 173 2.9E-22 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APS56_RS14590 c71cb4898e962251bd46e8606a47c2dd 204 PANTHER PTHR30328 4 92 1.5E-14 T 20-04-2016 APS56_RS14590 c71cb4898e962251bd46e8606a47c2dd 204 SUPERFAMILY SSF46689 4 66 2.99E-16 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS14590 c71cb4898e962251bd46e8606a47c2dd 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 52 4.0E-13 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS14590 c71cb4898e962251bd46e8606a47c2dd 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 5.8E-8 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS14590 c71cb4898e962251bd46e8606a47c2dd 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 5.8E-8 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS04345 962e863bdc5a19415aef696662054c24 296 PANTHER PTHR17630 68 294 6.6E-54 T 20-04-2016 APS56_RS04345 962e863bdc5a19415aef696662054c24 296 Pfam PF01738 Dienelactone hydrolase family 84 293 1.4E-47 T 20-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 APS56_RS04345 962e863bdc5a19415aef696662054c24 296 Gene3D G3DSA:3.40.50.1820 68 292 7.8E-52 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS04345 962e863bdc5a19415aef696662054c24 296 PANTHER PTHR17630:SF32 68 294 6.6E-54 T 20-04-2016 APS56_RS04345 962e863bdc5a19415aef696662054c24 296 SUPERFAMILY SSF53474 70 294 1.28E-40 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS09315 713759b5087fb15d62f79fc01f0b22c1 110 SUPERFAMILY SSF50249 6 109 8.0E-39 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS09315 713759b5087fb15d62f79fc01f0b22c1 110 PIRSF PIRSF002070 5 108 7.5E-35 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS09315 713759b5087fb15d62f79fc01f0b22c1 110 PANTHER PTHR10302 6 108 1.6E-35 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS09315 713759b5087fb15d62f79fc01f0b22c1 110 Gene3D G3DSA:2.40.50.140 5 109 3.9E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS09315 713759b5087fb15d62f79fc01f0b22c1 110 Hamap MF_00984 Single-stranded DNA-binding protein. 5 110 28.773 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS09315 713759b5087fb15d62f79fc01f0b22c1 110 Pfam PF00436 Single-strand binding protein family 6 107 2.3E-35 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APS56_RS09315 713759b5087fb15d62f79fc01f0b22c1 110 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 6 107 2.3E-37 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS09315 713759b5087fb15d62f79fc01f0b22c1 110 PANTHER PTHR10302:SF0 6 108 1.6E-35 T 20-04-2016 APS56_RS12290 84680a53e752c0ef56d58c6e3fc7e183 259 PANTHER PTHR23088:SF28 5 247 3.1E-89 T 20-04-2016 APS56_RS12290 84680a53e752c0ef56d58c6e3fc7e183 259 PANTHER PTHR23088 5 247 3.1E-89 T 20-04-2016 APS56_RS12290 84680a53e752c0ef56d58c6e3fc7e183 259 Pfam PF00795 Carbon-nitrogen hydrolase 7 235 2.4E-32 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS12290 84680a53e752c0ef56d58c6e3fc7e183 259 Gene3D G3DSA:3.60.110.10 1 254 1.3E-56 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS12290 84680a53e752c0ef56d58c6e3fc7e183 259 SUPERFAMILY SSF56317 2 252 1.44E-57 T 20-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 Pfam PF01245 Ribosomal protein L19 5 113 1.3E-41 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 PIRSF PIRSF002191 1 116 4.6E-42 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 SUPERFAMILY SSF50104 6 115 2.91E-37 T 20-04-2016 IPR008991 Translation protein SH3-like domain APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 PRINTS PR00061 Ribosomal protein L19 signature 35 64 2.1E-30 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 PRINTS PR00061 Ribosomal protein L19 signature 5 34 2.1E-30 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 PRINTS PR00061 Ribosomal protein L19 signature 89 114 2.1E-30 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 PANTHER PTHR15680 15 116 1.5E-34 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 114 3.5E-41 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00075 64f152b7e1ec75d6b655e6e1d55f30f4 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 115 26.405 T 20-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PIRSF PIRSF001480 5 404 1.5E-102 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 Pfam PF01238 Phosphomannose isomerase type I 8 368 9.4E-69 T 20-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PRINTS PR00714 Phosphomannose isomerase type I signature 286 305 6.8E-51 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PRINTS PR00714 Phosphomannose isomerase type I signature 38 53 6.8E-51 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PRINTS PR00714 Phosphomannose isomerase type I signature 11 29 6.8E-51 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PRINTS PR00714 Phosphomannose isomerase type I signature 86 107 6.8E-51 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PRINTS PR00714 Phosphomannose isomerase type I signature 131 154 6.8E-51 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PRINTS PR00714 Phosphomannose isomerase type I signature 267 286 6.8E-51 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PRINTS PR00714 Phosphomannose isomerase type I signature 248 267 6.8E-51 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 7 386 3.8E-78 T 20-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 Gene3D G3DSA:2.60.120.10 300 401 4.5E-13 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PANTHER PTHR10309 4 404 1.3E-94 T 20-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 PANTHER PTHR10309:SF0 4 404 1.3E-94 T 20-04-2016 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 131 139 - T 20-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 Gene3D G3DSA:1.10.441.10 146 243 1.8E-15 T 20-04-2016 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 Gene3D G3DSA:1.10.441.10 286 299 1.8E-15 T 20-04-2016 APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 Gene3D G3DSA:2.60.120.10 250 285 5.3E-58 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 Gene3D G3DSA:2.60.120.10 14 145 5.3E-58 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS00560 4ac9108247a2c5277ca41d600b2a492a 404 SUPERFAMILY SSF51182 6 392 5.53E-90 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS16525 cac23d7bf59b0a02c958adb176e83d83 366 PANTHER PTHR22916 3 139 8.4E-48 T 20-04-2016 APS56_RS16525 cac23d7bf59b0a02c958adb176e83d83 366 Pfam PF00535 Glycosyl transferase family 2 4 174 1.9E-21 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS16525 cac23d7bf59b0a02c958adb176e83d83 366 SUPERFAMILY SSF53448 2 263 1.5E-53 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS16525 cac23d7bf59b0a02c958adb176e83d83 366 PANTHER PTHR22916:SF9 3 139 8.4E-48 T 20-04-2016 APS56_RS16525 cac23d7bf59b0a02c958adb176e83d83 366 Gene3D G3DSA:3.90.550.10 2 249 2.7E-50 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS16525 cac23d7bf59b0a02c958adb176e83d83 366 PANTHER PTHR22916:SF9 157 278 8.4E-48 T 20-04-2016 APS56_RS16525 cac23d7bf59b0a02c958adb176e83d83 366 PANTHER PTHR22916 157 278 8.4E-48 T 20-04-2016 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 Pfam PF00710 Asparaginase, N-terminal 5 196 6.0E-61 T 20-04-2016 IPR027474 L-asparaginase, N-terminal APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 SMART SM00870 5 329 1.1E-104 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 PANTHER PTHR11707:SF28 5 341 2.1E-123 T 20-04-2016 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 PRINTS PR00139 Asparaginase/glutaminase family signature 82 100 7.2E-13 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 PRINTS PR00139 Asparaginase/glutaminase family signature 266 284 7.2E-13 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 7.2E-13 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 Gene3D G3DSA:3.40.50.40 215 341 5.8E-39 T 20-04-2016 IPR027473 L-asparaginase, C-terminal domain APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 PIRSF PIRSF500176 2 338 1.2E-91 T 20-04-2016 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 Gene3D G3DSA:3.40.50.1170 2 214 3.2E-73 T 20-04-2016 IPR027474 L-asparaginase, N-terminal APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 341 1.7E-90 T 20-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 SUPERFAMILY SSF53774 3 341 1.96E-98 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 PANTHER PTHR11707 5 341 2.1E-123 T 20-04-2016 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 20-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 APS56_RS08105 576cb63eecfba1194630c7e890826b0d 341 PIRSF PIRSF001220 1 340 7.1E-87 T 20-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Pfam PF00702 haloacid dehalogenase-like hydrolase 493 693 1.0E-21 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 313 769 4.9E-56 T 20-04-2016 IPR001757 P-type ATPase GO:0016021 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 497 511 3.7E-12 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 699 3.7E-12 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 349 363 3.7E-12 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PANTHER PTHR24093:SF50 93 782 5.4E-104 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 499 505 - T 20-04-2016 IPR018303 P-type ATPase, phosphorylation site APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Gene3D G3DSA:3.40.50.1000 600 748 4.0E-25 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Gene3D G3DSA:3.40.50.1000 479 514 4.0E-25 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 5 76 8.7E-11 T 20-04-2016 IPR021993 Putative metal-binding domain of cation transport ATPase APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 SUPERFAMILY SSF81665 729 782 2.75E-6 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 SUPERFAMILY SSF81665 197 237 2.75E-6 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 SUPERFAMILY SSF81665 400 491 2.75E-6 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Gene3D G3DSA:2.70.150.10 293 395 4.7E-19 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Gene3D G3DSA:2.70.150.10 192 211 4.7E-19 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Gene3D G3DSA:3.30.70.100 85 149 1.1E-8 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PRINTS PR00943 Copper-transporting ATPase signature 480 495 5.6E-10 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PRINTS PR00943 Copper-transporting ATPase signature 422 436 5.6E-10 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PRINTS PR00943 Copper-transporting ATPase signature 223 242 5.6E-10 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PRINTS PR00943 Copper-transporting ATPase signature 657 674 5.6E-10 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PRINTS PR00943 Copper-transporting ATPase signature 129 149 5.6E-10 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Pfam PF00403 Heavy-metal-associated domain 87 148 2.2E-5 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 Pfam PF00122 E1-E2 ATPase 296 488 3.5E-39 T 20-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 SUPERFAMILY SSF81653 308 396 5.49E-17 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 PANTHER PTHR24093 93 782 5.4E-104 T 20-04-2016 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 SUPERFAMILY SSF55008 81 150 8.25E-13 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 SUPERFAMILY SSF56784 495 515 3.13E-28 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07865 af2983a5cf140d4fb3d28a8dfaf9bd4d 791 SUPERFAMILY SSF56784 550 776 3.13E-28 T 20-04-2016 IPR023214 HAD-like domain APS56_RS07320 e8cdf6ec0a658dca45b3c850a218eb39 381 Gene3D G3DSA:3.40.640.10 45 256 1.7E-59 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS07320 e8cdf6ec0a658dca45b3c850a218eb39 381 PANTHER PTHR11751:SF305 15 381 8.5E-111 T 20-04-2016 APS56_RS07320 e8cdf6ec0a658dca45b3c850a218eb39 381 SUPERFAMILY SSF53383 1 381 1.5E-98 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS07320 e8cdf6ec0a658dca45b3c850a218eb39 381 PANTHER PTHR11751 15 381 8.5E-111 T 20-04-2016 APS56_RS07320 e8cdf6ec0a658dca45b3c850a218eb39 381 Pfam PF00155 Aminotransferase class I and II 32 378 8.9E-58 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APS56_RS07320 e8cdf6ec0a658dca45b3c850a218eb39 381 Gene3D G3DSA:3.90.1150.10 257 381 1.2E-32 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS07320 e8cdf6ec0a658dca45b3c850a218eb39 381 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 20-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APS56_RS04010 266c342df1be3b841afbcab99581856f 140 Gene3D G3DSA:2.60.120.460 1 139 2.0E-54 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 APS56_RS04010 266c342df1be3b841afbcab99581856f 140 Pfam PF01894 Uncharacterised protein family UPF0047 20 136 3.1E-38 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 APS56_RS04010 266c342df1be3b841afbcab99581856f 140 PANTHER PTHR30615:SF5 1 136 1.5E-72 T 20-04-2016 APS56_RS04010 266c342df1be3b841afbcab99581856f 140 SUPERFAMILY SSF111038 1 139 1.44E-46 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 APS56_RS04010 266c342df1be3b841afbcab99581856f 140 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 14 139 1.4E-40 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 APS56_RS04010 266c342df1be3b841afbcab99581856f 140 PIRSF PIRSF004681 1 140 1.7E-44 T 20-04-2016 IPR001602 Uncharacterised protein family UPF0047 APS56_RS04010 266c342df1be3b841afbcab99581856f 140 PANTHER PTHR30615 1 136 1.5E-72 T 20-04-2016 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 PANTHER PTHR10668:SF4 7 483 4.1E-85 T 20-04-2016 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 PANTHER PTHR10668 7 483 4.1E-85 T 20-04-2016 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 SUPERFAMILY SSF51905 445 485 1.3E-61 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 SUPERFAMILY SSF51905 1 316 1.3E-61 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 6 487 2.8E-111 T 20-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 Gene3D G3DSA:3.50.50.60 4 94 1.3E-39 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 Gene3D G3DSA:3.50.50.60 200 354 1.3E-39 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 Pfam PF01593 Flavin containing amine oxidoreductase 15 483 2.8E-25 T 20-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 9.7E-5 T 20-04-2016 APS56_RS04130 f8472fb2df7483cb412212efbbbd4b84 489 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 9.7E-5 T 20-04-2016 APS56_RS13120 373b2acb06b6b532b93b2173bc76fa59 340 PANTHER PTHR35089 4 178 6.2E-28 T 20-04-2016 APS56_RS13120 373b2acb06b6b532b93b2173bc76fa59 340 SUPERFAMILY SSF111384 26 170 2.48E-19 T 20-04-2016 IPR024930 Skp domain APS56_RS13120 373b2acb06b6b532b93b2173bc76fa59 340 Pfam PF03938 Outer membrane protein (OmpH-like) 11 169 1.0E-29 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APS56_RS13120 373b2acb06b6b532b93b2173bc76fa59 340 Gene3D G3DSA:3.30.910.20 102 171 6.2E-19 T 20-04-2016 APS56_RS13120 373b2acb06b6b532b93b2173bc76fa59 340 Gene3D G3DSA:3.30.910.20 14 69 6.2E-19 T 20-04-2016 APS56_RS13120 373b2acb06b6b532b93b2173bc76fa59 340 SMART SM00935 9 172 4.2E-36 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APS56_RS11215 9eb25d3456f9b36f7b6c25a81e9dab84 253 PANTHER PTHR10681 82 251 2.2E-24 T 20-04-2016 APS56_RS11215 9eb25d3456f9b36f7b6c25a81e9dab84 253 Gene3D G3DSA:3.40.30.10 81 234 1.5E-27 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS11215 9eb25d3456f9b36f7b6c25a81e9dab84 253 Pfam PF00578 AhpC/TSA family 82 206 1.4E-19 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS11215 9eb25d3456f9b36f7b6c25a81e9dab84 253 SUPERFAMILY SSF52833 80 252 1.32E-37 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS11215 9eb25d3456f9b36f7b6c25a81e9dab84 253 PANTHER PTHR10681:SF91 82 251 2.2E-24 T 20-04-2016 APS56_RS02940 7cb460d52c7ff7c16d213b53322b0813 501 Gene3D G3DSA:3.40.720.10 27 412 1.9E-87 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS02940 7cb460d52c7ff7c16d213b53322b0813 501 PANTHER PTHR10342:SF199 387 467 7.7E-85 T 20-04-2016 APS56_RS02940 7cb460d52c7ff7c16d213b53322b0813 501 PANTHER PTHR10342:SF199 7 371 7.7E-85 T 20-04-2016 APS56_RS02940 7cb460d52c7ff7c16d213b53322b0813 501 PANTHER PTHR10342 387 467 7.7E-85 T 20-04-2016 APS56_RS02940 7cb460d52c7ff7c16d213b53322b0813 501 PANTHER PTHR10342 7 371 7.7E-85 T 20-04-2016 APS56_RS02940 7cb460d52c7ff7c16d213b53322b0813 501 SUPERFAMILY SSF53649 26 439 6.25E-95 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS02940 7cb460d52c7ff7c16d213b53322b0813 501 Gene3D G3DSA:3.30.1120.10 413 440 8.8E-4 T 20-04-2016 APS56_RS02940 7cb460d52c7ff7c16d213b53322b0813 501 Pfam PF00884 Sulfatase 28 335 9.9E-53 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PIRSF PIRSF000532 4 326 1.1E-118 T 20-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 SUPERFAMILY SSF53784 3 320 1.96E-117 T 20-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 ProSitePatterns PS00433 Phosphofructokinase signature. 252 270 - T 20-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 Gene3D G3DSA:3.40.50.450 3 217 8.2E-75 T 20-04-2016 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PANTHER PTHR13697 3 310 1.2E-137 T 20-04-2016 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 181 198 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 143 161 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 163 179 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 125 142 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 97 113 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 248 270 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 217 229 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 10 29 9.8E-83 T 20-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 Pfam PF00365 Phosphofructokinase 7 284 2.0E-110 T 20-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 7 309 6.6E-125 T 20-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 5 327 44.263 T 20-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS02875 4aacce880f9ba008561ddbcde5a63a7f 328 PANTHER PTHR13697:SF4 3 310 1.2E-137 T 20-04-2016 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 SUPERFAMILY SSF53649 223 499 9.04E-96 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 SUPERFAMILY SSF53649 27 190 9.04E-96 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 PANTHER PTHR10342:SF199 1 321 4.3E-111 T 20-04-2016 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 PANTHER PTHR10342:SF199 360 499 4.3E-111 T 20-04-2016 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 Gene3D G3DSA:3.30.1120.10 438 499 8.4E-10 T 20-04-2016 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 Pfam PF00884 Sulfatase 29 415 6.8E-55 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 PANTHER PTHR10342 1 321 4.3E-111 T 20-04-2016 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 PANTHER PTHR10342 360 499 4.3E-111 T 20-04-2016 APS56_RS09810 d0d0e4f0f6ffcf13daf13879f992ef72 533 Gene3D G3DSA:3.40.720.10 26 432 1.5E-83 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 PIRSF PIRSF000446 1 296 7.3E-98 T 20-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 285 3.8E-103 T 20-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 PANTHER PTHR10982 1 286 5.0E-140 T 20-04-2016 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 Pfam PF00698 Acyl transferase domain 4 287 6.7E-45 T 20-04-2016 IPR014043 Acyl transferase APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 SUPERFAMILY SSF52151 2 118 7.59E-77 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 SUPERFAMILY SSF52151 184 290 7.59E-77 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 Gene3D G3DSA:3.30.70.250 122 190 1.1E-26 T 20-04-2016 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 Gene3D G3DSA:3.40.366.10 191 289 2.7E-76 T 20-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 Gene3D G3DSA:3.40.366.10 3 118 2.7E-76 T 20-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 295 1.5E-49 T 20-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APS56_RS08885 4d0cada1b81c04b45cc840fc22db4339 297 SUPERFAMILY SSF55048 126 187 7.59E-18 T 20-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APS56_RS02140 c6e15014b3dc33d2c8882e66a0939f29 191 PANTHER PTHR23416 13 170 2.0E-25 T 20-04-2016 APS56_RS02140 c6e15014b3dc33d2c8882e66a0939f29 191 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 20-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APS56_RS02140 c6e15014b3dc33d2c8882e66a0939f29 191 Gene3D G3DSA:2.160.10.10 9 170 3.2E-37 T 20-04-2016 APS56_RS02140 c6e15014b3dc33d2c8882e66a0939f29 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 63 94 2.4E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02140 c6e15014b3dc33d2c8882e66a0939f29 191 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 149 6.7E-9 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02140 c6e15014b3dc33d2c8882e66a0939f29 191 SUPERFAMILY SSF51161 37 171 5.41E-34 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS02265 26391289d37c7fe325df7822a896b4e1 127 Gene3D G3DSA:1.10.260.40 2 71 2.4E-13 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS02265 26391289d37c7fe325df7822a896b4e1 127 SUPERFAMILY SSF47413 4 69 1.16E-8 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS02265 26391289d37c7fe325df7822a896b4e1 127 Pfam PF01381 Helix-turn-helix 23 66 8.4E-7 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS14900 4b13a04471c5c6cf726eb2eeea0fc073 76 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 6 67 4.6E-34 T 20-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 APS56_RS14900 4b13a04471c5c6cf726eb2eeea0fc073 76 Gene3D G3DSA:1.10.720.30 13 71 5.2E-31 T 20-04-2016 IPR003034 SAP domain APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 SUPERFAMILY SSF51735 773 945 4.33E-26 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 SUPERFAMILY SSF53474 6 317 9.67E-59 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 PANTHER PTHR21499:SF3 295 780 7.1E-111 T 20-04-2016 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 SUPERFAMILY SSF53633 328 612 4.19E-69 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Gene3D G3DSA:3.30.360.10 945 1106 1.5E-47 T 20-04-2016 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 SUPERFAMILY SSF55347 923 1111 9.81E-38 T 20-04-2016 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Gene3D G3DSA:3.40.50.720 773 944 1.4E-50 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 SUPERFAMILY SSF55021 617 694 1.14E-18 T 20-04-2016 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 781 915 1.8E-12 T 20-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Pfam PF00561 alpha/beta hydrolase fold 39 155 2.3E-12 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 PANTHER PTHR21499 295 780 7.1E-111 T 20-04-2016 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 SUPERFAMILY SSF55021 700 775 2.21E-6 T 20-04-2016 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Pfam PF00696 Amino acid kinase family 329 599 3.3E-48 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Pfam PF00742 Homoserine dehydrogenase 923 1124 2.4E-44 T 20-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Gene3D G3DSA:3.40.1160.10 425 615 3.9E-58 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Gene3D G3DSA:3.40.1160.10 324 377 3.9E-58 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 Gene3D G3DSA:3.40.50.1820 13 316 1.7E-20 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS07430 24393537778f2e3db0e6557108f50a70 1131 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 330 768 8.8E-96 T 20-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS07295 9f3f1db0ebbcc49faccafc68243b91b5 150 Gene3D G3DSA:3.50.80.10 1 146 1.1E-57 T 20-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APS56_RS07295 9f3f1db0ebbcc49faccafc68243b91b5 150 PANTHER PTHR10472 2 149 5.6E-74 T 20-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APS56_RS07295 9f3f1db0ebbcc49faccafc68243b91b5 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 146 34.17 T 20-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APS56_RS07295 9f3f1db0ebbcc49faccafc68243b91b5 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 9.3E-58 T 20-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APS56_RS07295 9f3f1db0ebbcc49faccafc68243b91b5 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 145 8.6E-54 T 20-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APS56_RS07295 9f3f1db0ebbcc49faccafc68243b91b5 150 SUPERFAMILY SSF69500 1 146 1.09E-55 T 20-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 Gene3D G3DSA:2.40.340.10 323 386 7.1E-8 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 Pfam PF03453 MoeA N-terminal region (domain I and II) 2 159 4.9E-31 T 20-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 168 304 3.0E-28 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 Pfam PF00994 Probable molybdopterin binding domain 172 305 2.7E-21 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 Gene3D G3DSA:3.90.105.10 123 154 5.2E-18 T 20-04-2016 APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 PANTHER PTHR10192 1 390 2.8E-116 T 20-04-2016 APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 SUPERFAMILY SSF63867 320 389 1.22E-10 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 Gene3D G3DSA:2.170.190.11 45 122 5.8E-26 T 20-04-2016 APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 Pfam PF03454 MoeA C-terminal region (domain IV) 324 390 7.0E-7 T 20-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 SMART SM00852 172 310 5.1E-27 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 SUPERFAMILY SSF63882 1 167 5.63E-46 T 20-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 SUPERFAMILY SSF53218 167 314 6.94E-34 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS03755 11686e4286c15e3521d5db3781e28d84 392 Gene3D G3DSA:3.40.980.10 155 322 7.8E-51 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS07725 51c1993ec98f660ae48605a65e383bb0 227 Gene3D G3DSA:2.40.128.110 129 223 3.2E-7 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS07725 51c1993ec98f660ae48605a65e383bb0 227 Pfam PF04264 YceI-like domain 128 221 7.2E-6 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS07725 51c1993ec98f660ae48605a65e383bb0 227 SUPERFAMILY SSF101874 124 223 2.62E-9 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS03625 9abe33f63a05a0affa52377d4203fe2d 378 SUPERFAMILY SSF53756 7 373 6.07E-80 T 20-04-2016 APS56_RS03625 9abe33f63a05a0affa52377d4203fe2d 378 Gene3D G3DSA:3.40.50.2000 171 350 2.7E-26 T 20-04-2016 APS56_RS03625 9abe33f63a05a0affa52377d4203fe2d 378 PANTHER PTHR12526:SF336 1 374 1.0E-169 T 20-04-2016 APS56_RS03625 9abe33f63a05a0affa52377d4203fe2d 378 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 1 372 9.9E-171 T 20-04-2016 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 APS56_RS03625 9abe33f63a05a0affa52377d4203fe2d 378 Pfam PF00534 Glycosyl transferases group 1 193 350 5.1E-35 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS03625 9abe33f63a05a0affa52377d4203fe2d 378 PANTHER PTHR12526 1 374 1.0E-169 T 20-04-2016 APS56_RS03625 9abe33f63a05a0affa52377d4203fe2d 378 Pfam PF13439 Glycosyltransferase Family 4 11 180 7.1E-27 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS03090 6f8c71a937de22ea7e6e5dfe370d7e7c 362 Pfam PF06580 Histidine kinase 170 247 2.0E-22 T 20-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APS56_RS03090 6f8c71a937de22ea7e6e5dfe370d7e7c 362 PANTHER PTHR34220 19 361 7.0E-61 T 20-04-2016 APS56_RS03090 6f8c71a937de22ea7e6e5dfe370d7e7c 362 PANTHER PTHR34220:SF1 19 361 7.0E-61 T 20-04-2016 APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 ProSitePatterns PS00585 Ribosomal protein S5 signature. 35 67 - T 20-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 Pfam PF03719 Ribosomal protein S5, C-terminal domain 94 164 1.0E-30 T 20-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 PANTHER PTHR13718 17 169 8.0E-62 T 20-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 Gene3D G3DSA:3.30.160.20 17 80 6.3E-26 T 20-04-2016 IPR014720 Double-stranded RNA-binding domain APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 170 32.826 T 20-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 Gene3D G3DSA:3.30.230.10 83 165 4.3E-32 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 Pfam PF00333 Ribosomal protein S5, N-terminal domain 18 82 1.7E-25 T 20-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 SUPERFAMILY SSF54211 87 165 4.3E-25 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 SUPERFAMILY SSF54768 17 83 1.96E-20 T 20-04-2016 APS56_RS14030 fe343796e89d6d868fa7783aa1fd585c 174 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 17 169 2.2E-59 T 20-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APS56_RS11290 72eaf70049e46799de12424aaa9aeeef 758 PANTHER PTHR12815:SF13 259 551 1.5E-72 T 20-04-2016 APS56_RS11290 72eaf70049e46799de12424aaa9aeeef 758 PANTHER PTHR12815:SF13 569 758 1.5E-72 T 20-04-2016 APS56_RS11290 72eaf70049e46799de12424aaa9aeeef 758 Pfam PF01103 Surface antigen 380 744 6.1E-28 T 20-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APS56_RS11290 72eaf70049e46799de12424aaa9aeeef 758 PANTHER PTHR12815 259 551 1.5E-72 T 20-04-2016 APS56_RS11290 72eaf70049e46799de12424aaa9aeeef 758 Gene3D G3DSA:2.40.160.50 372 745 1.7E-16 T 20-04-2016 APS56_RS11290 72eaf70049e46799de12424aaa9aeeef 758 PANTHER PTHR12815:SF13 64 230 1.5E-72 T 20-04-2016 APS56_RS11290 72eaf70049e46799de12424aaa9aeeef 758 PANTHER PTHR12815 64 230 1.5E-72 T 20-04-2016 APS56_RS11290 72eaf70049e46799de12424aaa9aeeef 758 PANTHER PTHR12815 569 758 1.5E-72 T 20-04-2016 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 Gene3D G3DSA:3.40.50.1950 6 190 7.4E-57 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 Pfam PF02441 Flavoprotein 7 136 2.3E-31 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 SUPERFAMILY SSF102645 188 401 7.32E-71 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 SUPERFAMILY SSF52507 1 180 6.15E-53 T 20-04-2016 IPR003382 Flavoprotein GO:0003824 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 PANTHER PTHR14359 3 402 8.2E-166 T 20-04-2016 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 189 372 2.7E-69 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 PANTHER PTHR14359:SF20 3 402 8.2E-166 T 20-04-2016 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 397 4.7E-129 T 20-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 APS56_RS16385 f6712c68b639e8ba8e96e9bfa2ca25fd 403 Gene3D G3DSA:3.40.50.10300 191 401 1.1E-78 T 20-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PANTHER PTHR30620:SF37 102 792 6.4E-253 T 20-04-2016 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PANTHER PTHR30620:SF37 32 66 6.4E-253 T 20-04-2016 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 SUPERFAMILY SSF51445 30 425 1.16E-91 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 113 387 5.6E-62 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 Gene3D G3DSA:3.20.20.300 30 403 1.4E-97 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 SMART SM01217 709 778 5.3E-29 T 20-04-2016 IPR026891 Fibronectin type III-like domain APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 Gene3D G3DSA:3.40.50.1700 412 675 1.2E-66 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 SUPERFAMILY SSF52279 426 675 1.28E-51 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 426 672 9.2E-52 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 130 146 9.5E-21 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 304 322 9.5E-21 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 230 246 9.5E-21 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 199 215 9.5E-21 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PRINTS PR00133 Glycosyl hydrolase family 3 signature 153 172 9.5E-21 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 Pfam PF14310 Fibronectin type III-like domain 709 778 7.4E-21 T 20-04-2016 IPR026891 Fibronectin type III-like domain APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PANTHER PTHR30620 102 792 6.4E-253 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS05915 6af7887735bbbe2d9509b82bfbe44223 793 PANTHER PTHR30620 32 66 6.4E-253 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 SUPERFAMILY SSF54211 234 404 2.28E-58 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 Gene3D G3DSA:3.40.50.670 417 631 1.7E-90 T 20-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 13 23 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 325 341 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 373 387 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 619 635 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 203 216 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 387 407 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 483 492 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 188 203 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 255 273 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR01159 DNA gyrase subunit B signature 603 615 4.2E-61 T 20-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 13 645 3.2E-284 T 20-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 SMART SM00387 38 182 2.6E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 522 539 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 281 294 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 504 520 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 42 57 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 582 598 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 433 447 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 120 134 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 542 554 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PRINTS PR00418 DNA topoisomerase II family signature 77 90 3.3E-68 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 Gene3D G3DSA:3.30.230.10 233 405 2.3E-72 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 PANTHER PTHR10169 12 642 2.3E-277 T 20-04-2016 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 Pfam PF00204 DNA gyrase B 234 403 7.1E-62 T 20-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 ProSitePatterns PS00177 DNA topoisomerase II signature. 435 443 - T 20-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 Pfam PF01751 Toprim domain 432 547 1.1E-17 T 20-04-2016 IPR006171 Toprim domain APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 580 639 3.1E-27 T 20-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 10 649 84.921 T 20-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 181 7.3E-23 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 SUPERFAMILY SSF55874 13 221 2.19E-70 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 SMART SM00433 42 643 0.0 T 20-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 Gene3D G3DSA:3.30.565.10 13 221 3.7E-89 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14250 b31076bd54941ab918c5b3ccef996375 649 SUPERFAMILY SSF56719 407 641 1.15E-86 T 20-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APS56_RS02160 b2a58baef79c86656516c503ffe02e0a 477 PANTHER PTHR13285:SF24 1 448 4.1E-130 T 20-04-2016 APS56_RS02160 b2a58baef79c86656516c503ffe02e0a 477 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 35 383 6.2E-29 T 20-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT APS56_RS02160 b2a58baef79c86656516c503ffe02e0a 477 PIRSF PIRSF016636 1 477 2.0E-151 T 20-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB APS56_RS02160 b2a58baef79c86656516c503ffe02e0a 477 PANTHER PTHR13285 1 448 4.1E-130 T 20-04-2016 APS56_RS02160 b2a58baef79c86656516c503ffe02e0a 477 PIRSF PIRSF500217 1 477 1.7E-151 T 20-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 APS56_RS06615 b3390a118270ee250c417203bb4c52f9 185 Gene3D G3DSA:1.25.40.10 30 134 1.0E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06615 b3390a118270ee250c417203bb4c52f9 185 SUPERFAMILY SSF48452 26 131 2.28E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10625 5595e39ba973502b6a4058a2c376715f 413 PANTHER PTHR21666:SF200 30 410 1.9E-25 T 20-04-2016 APS56_RS10625 5595e39ba973502b6a4058a2c376715f 413 Pfam PF01551 Peptidase family M23 314 406 4.8E-16 T 20-04-2016 IPR016047 Peptidase M23 APS56_RS10625 5595e39ba973502b6a4058a2c376715f 413 Gene3D G3DSA:1.20.5.170 43 131 5.3E-4 T 20-04-2016 APS56_RS10625 5595e39ba973502b6a4058a2c376715f 413 PANTHER PTHR21666 30 410 1.9E-25 T 20-04-2016 APS56_RS10625 5595e39ba973502b6a4058a2c376715f 413 Gene3D G3DSA:2.70.70.10 269 410 2.5E-27 T 20-04-2016 APS56_RS10625 5595e39ba973502b6a4058a2c376715f 413 SUPERFAMILY SSF51261 219 410 3.4E-24 T 20-04-2016 IPR011055 Duplicated hybrid motif APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 Pfam PF12833 Helix-turn-helix domain 206 283 1.9E-19 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 Gene3D G3DSA:1.10.10.60 236 285 1.0E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 PANTHER PTHR11019:SF65 30 290 2.4E-38 T 20-04-2016 APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 SMART SM00342 199 282 3.2E-22 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 PANTHER PTHR11019 30 290 2.4E-38 T 20-04-2016 APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 Gene3D G3DSA:2.60.120.10 27 78 1.7E-8 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 SUPERFAMILY SSF46689 186 233 4.48E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 Gene3D G3DSA:1.10.10.60 183 235 1.8E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 SUPERFAMILY SSF46689 235 286 7.17E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06190 da963b88db9f4091070e23525ba8f904 292 SUPERFAMILY SSF51182 30 93 1.4E-7 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS02350 d52b82a4f97224b450920d9b956a3115 281 SUPERFAMILY SSF56300 6 231 1.28E-27 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS02350 d52b82a4f97224b450920d9b956a3115 281 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 7 228 4.8E-12 T 20-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APS56_RS02350 d52b82a4f97224b450920d9b956a3115 281 PANTHER PTHR34990:SF2 11 232 1.0E-71 T 20-04-2016 APS56_RS02350 d52b82a4f97224b450920d9b956a3115 281 PANTHER PTHR34990 11 232 1.0E-71 T 20-04-2016 APS56_RS02350 d52b82a4f97224b450920d9b956a3115 281 Gene3D G3DSA:3.60.21.10 158 241 6.9E-26 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS02350 d52b82a4f97224b450920d9b956a3115 281 Gene3D G3DSA:3.60.21.10 8 123 6.9E-26 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS08025 a1c4a67f0ca2c36c37939839aed4da0c 340 PANTHER PTHR23408 7 334 3.1E-158 T 20-04-2016 APS56_RS08025 a1c4a67f0ca2c36c37939839aed4da0c 340 Gene3D G3DSA:1.20.5.170 5 59 4.7E-18 T 20-04-2016 APS56_RS08025 a1c4a67f0ca2c36c37939839aed4da0c 340 Pfam PF03308 ArgK protein 27 295 1.4E-98 T 20-04-2016 APS56_RS08025 a1c4a67f0ca2c36c37939839aed4da0c 340 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 22 328 4.5E-99 T 20-04-2016 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 APS56_RS08025 a1c4a67f0ca2c36c37939839aed4da0c 340 Gene3D G3DSA:3.40.50.300 60 263 2.5E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS08025 a1c4a67f0ca2c36c37939839aed4da0c 340 PANTHER PTHR23408:SF17 7 334 3.1E-158 T 20-04-2016 APS56_RS08025 a1c4a67f0ca2c36c37939839aed4da0c 340 SUPERFAMILY SSF52540 8 330 1.44E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06735 0f777e7ce952e46f52986f6cbca745da 332 Gene3D G3DSA:3.40.50.970 2 324 5.9E-126 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS06735 0f777e7ce952e46f52986f6cbca745da 332 SUPERFAMILY SSF52518 3 323 2.21E-96 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS06735 0f777e7ce952e46f52986f6cbca745da 332 PANTHER PTHR11516 1 320 4.0E-140 T 20-04-2016 APS56_RS06735 0f777e7ce952e46f52986f6cbca745da 332 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 7 320 2.1E-131 T 20-04-2016 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APS56_RS06735 0f777e7ce952e46f52986f6cbca745da 332 PANTHER PTHR11516:SF25 1 320 4.0E-140 T 20-04-2016 APS56_RS06735 0f777e7ce952e46f52986f6cbca745da 332 Pfam PF00676 Dehydrogenase E1 component 15 310 1.6E-86 T 20-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APS56_RS06675 3b07650fb2f9e93008d3fff1281e8aa2 269 PANTHER PTHR13966 55 254 1.1E-43 T 20-04-2016 APS56_RS06675 3b07650fb2f9e93008d3fff1281e8aa2 269 Pfam PF01223 DNA/RNA non-specific endonuclease 48 251 1.8E-47 T 20-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APS56_RS06675 3b07650fb2f9e93008d3fff1281e8aa2 269 ProSitePatterns PS01070 DNA/RNA non-specific endonucleases active site. 118 126 - T 20-04-2016 IPR018524 DNA/RNA non-specific endonuclease, active site GO:0003676|GO:0016787|GO:0046872 APS56_RS06675 3b07650fb2f9e93008d3fff1281e8aa2 269 SMART SM00892 59 252 4.5E-56 T 20-04-2016 IPR001604 DNA/RNA non-specific endonuclease GO:0003676|GO:0016787|GO:0046872 APS56_RS06675 3b07650fb2f9e93008d3fff1281e8aa2 269 SMART SM00477 60 252 1.1E-46 T 20-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 APS56_RS06675 3b07650fb2f9e93008d3fff1281e8aa2 269 SUPERFAMILY SSF54060 49 259 7.06E-64 T 20-04-2016 APS56_RS06675 3b07650fb2f9e93008d3fff1281e8aa2 269 Gene3D G3DSA:3.40.570.10 49 267 8.0E-66 T 20-04-2016 IPR020821 Extracellular Endonuclease, subunit A GO:0003676|GO:0016787|GO:0046872 APS56_RS13335 fd48d0e9a11cc7619d2ba824fb21230f 118 PANTHER PTHR40455:SF1 3 118 2.7E-24 T 20-04-2016 APS56_RS13335 fd48d0e9a11cc7619d2ba824fb21230f 118 SMART SM00530 60 114 0.0011 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS13335 fd48d0e9a11cc7619d2ba824fb21230f 118 PANTHER PTHR40455 3 118 2.7E-24 T 20-04-2016 APS56_RS13335 fd48d0e9a11cc7619d2ba824fb21230f 118 Gene3D G3DSA:1.10.260.40 42 115 1.8E-14 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS13335 fd48d0e9a11cc7619d2ba824fb21230f 118 SUPERFAMILY SSF47413 56 115 1.24E-9 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS13335 fd48d0e9a11cc7619d2ba824fb21230f 118 Pfam PF01381 Helix-turn-helix 62 113 5.8E-8 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 393 2.9E-145 T 20-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 SUPERFAMILY SSF52777 166 392 1.25E-81 T 20-04-2016 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 164 392 8.9E-75 T 20-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 PANTHER PTHR23151:SF47 2 393 3.5E-181 T 20-04-2016 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 Pfam PF00364 Biotin-requiring enzyme 4 75 2.5E-18 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 Gene3D G3DSA:3.30.559.10 159 392 2.5E-84 T 20-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 Gene3D G3DSA:4.10.320.10 116 154 9.7E-16 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 Pfam PF02817 e3 binding domain 116 147 1.9E-11 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 PANTHER PTHR23151 2 393 3.5E-181 T 20-04-2016 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 SUPERFAMILY SSF47005 114 152 3.01E-9 T 20-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 SUPERFAMILY SSF51230 1 90 4.45E-22 T 20-04-2016 IPR011053 Single hybrid motif APS56_RS09130 9c9c09b68e3dc516ff7628cf0addf58b 402 Gene3D G3DSA:2.40.50.100 1 93 3.8E-23 T 20-04-2016 APS56_RS16540 9bc274f2f7d9bf94d592bd47be188316 203 PANTHER PTHR11820 2 203 1.2E-69 T 20-04-2016 APS56_RS16540 9bc274f2f7d9bf94d592bd47be188316 203 SUPERFAMILY SSF56529 2 202 1.57E-60 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS16540 9bc274f2f7d9bf94d592bd47be188316 203 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 3 181 4.2E-42 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS16540 9bc274f2f7d9bf94d592bd47be188316 203 Gene3D G3DSA:3.90.850.10 2 202 2.1E-67 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS16540 9bc274f2f7d9bf94d592bd47be188316 203 PANTHER PTHR11820:SF7 2 203 1.2E-69 T 20-04-2016 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 114 25.386 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 PANTHER PTHR10986:SF12 2 114 3.2E-55 T 20-04-2016 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 Pfam PF00453 Ribosomal protein L20 3 108 2.1E-46 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 PANTHER PTHR10986 2 114 3.2E-55 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 PRINTS PR00062 Ribosomal protein L20 signature 12 41 1.1E-35 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 PRINTS PR00062 Ribosomal protein L20 signature 75 101 1.1E-35 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 PRINTS PR00062 Ribosomal protein L20 signature 42 71 1.1E-35 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 72 5.0E-20 T 20-04-2016 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.3E-47 T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 SUPERFAMILY SSF74731 3 114 5.86E-46 T 20-04-2016 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 Gene3D G3DSA:1.10.1900.20 55 114 1.2E-30 T 20-04-2016 APS56_RS16625 82d4e389c8306ee195512624a558e231 114 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 20-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APS56_RS07765 456c3756ff8bbd2a34ff28c8a76ef45a 261 Gene3D G3DSA:1.20.1080.10 21 255 1.8E-84 T 20-04-2016 IPR023271 Aquaporin-like APS56_RS07765 456c3756ff8bbd2a34ff28c8a76ef45a 261 Pfam PF01226 Formate/nitrite transporter 7 252 2.2E-83 T 20-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APS56_RS07765 456c3756ff8bbd2a34ff28c8a76ef45a 261 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 163 173 - T 20-04-2016 IPR024002 Formate/nitrite transporter, conserved site APS56_RS07765 456c3756ff8bbd2a34ff28c8a76ef45a 261 PANTHER PTHR30520 3 256 1.0E-103 T 20-04-2016 APS56_RS07765 456c3756ff8bbd2a34ff28c8a76ef45a 261 PANTHER PTHR30520:SF0 3 256 1.0E-103 T 20-04-2016 APS56_RS07765 456c3756ff8bbd2a34ff28c8a76ef45a 261 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 78 87 - T 20-04-2016 IPR024002 Formate/nitrite transporter, conserved site APS56_RS07765 456c3756ff8bbd2a34ff28c8a76ef45a 261 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 20 253 3.9E-75 T 20-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APS56_RS02450 2269b5ca10b942add6ee92feea0687a5 628 Pfam PF03739 Predicted permease YjgP/YjgQ family 1 422 4.3E-70 T 20-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APS56_RS02450 2269b5ca10b942add6ee92feea0687a5 628 PANTHER PTHR33529:SF2 1 239 1.2E-49 T 20-04-2016 APS56_RS02450 2269b5ca10b942add6ee92feea0687a5 628 PANTHER PTHR33529:SF2 319 451 1.2E-49 T 20-04-2016 APS56_RS02450 2269b5ca10b942add6ee92feea0687a5 628 PANTHER PTHR33529 1 239 1.2E-49 T 20-04-2016 APS56_RS02450 2269b5ca10b942add6ee92feea0687a5 628 PANTHER PTHR33529 319 451 1.2E-49 T 20-04-2016 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 Gene3D G3DSA:1.10.1740.10 6 104 5.6E-25 T 20-04-2016 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 Pfam PF08281 Sigma-70, region 4 108 158 1.9E-9 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 Pfam PF04542 Sigma-70 region 2 12 79 2.2E-16 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 161 8.8E-27 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 SUPERFAMILY SSF88946 8 87 2.67E-22 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 PANTHER PTHR30173:SF8 1 163 1.5E-52 T 20-04-2016 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 PANTHER PTHR30173 1 163 1.5E-52 T 20-04-2016 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 SUPERFAMILY SSF88659 102 163 1.83E-9 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS07555 28e8c1b0517e9bbce6ebe71ce5fd05b6 164 Gene3D G3DSA:1.10.10.10 105 163 4.6E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS09410 891353e0611b80625821883824784f64 529 Pfam PF13180 PDZ domain 102 182 8.2E-9 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS09410 891353e0611b80625821883824784f64 529 Pfam PF03572 Peptidase family S41 202 356 3.1E-45 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS09410 891353e0611b80625821883824784f64 529 Gene3D G3DSA:2.30.42.10 102 184 1.1E-16 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS09410 891353e0611b80625821883824784f64 529 PANTHER PTHR32060:SF9 39 437 1.5E-109 T 20-04-2016 APS56_RS09410 891353e0611b80625821883824784f64 529 SUPERFAMILY SSF52096 196 356 2.65E-65 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS09410 891353e0611b80625821883824784f64 529 SUPERFAMILY SSF52096 41 119 2.65E-65 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS09410 891353e0611b80625821883824784f64 529 SUPERFAMILY SSF50156 73 199 3.55E-17 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS09410 891353e0611b80625821883824784f64 529 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 55 356 6.4E-85 T 20-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APS56_RS09410 891353e0611b80625821883824784f64 529 PANTHER PTHR32060 39 437 1.5E-109 T 20-04-2016 APS56_RS09410 891353e0611b80625821883824784f64 529 SMART SM00245 176 357 2.7E-44 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS09410 891353e0611b80625821883824784f64 529 SMART SM00228 99 174 2.8E-8 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS09410 891353e0611b80625821883824784f64 529 Gene3D G3DSA:3.90.226.10 508 527 5.1E-61 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS09410 891353e0611b80625821883824784f64 529 Gene3D G3DSA:3.90.226.10 403 415 5.1E-61 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS09410 891353e0611b80625821883824784f64 529 Gene3D G3DSA:3.90.226.10 185 355 5.1E-61 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS08655 46eca6a8307a9ac7f316bd61f6162240 74 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 6 65 3.3E-21 T 20-04-2016 IPR018691 Protein of unknown function DUF2188 APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 SUPERFAMILY SSF49464 21 104 1.45E-13 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 Gene3D G3DSA:2.60.40.1120 22 95 1.4E-10 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 Gene3D G3DSA:2.40.170.20 219 741 6.8E-49 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 Pfam PF13715 CarboxypepD_reg-like domain 22 106 5.0E-20 T 20-04-2016 APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 Pfam PF07715 TonB-dependent Receptor Plug Domain 126 219 3.8E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 PANTHER PTHR30069 8 222 2.7E-27 T 20-04-2016 APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 Pfam PF00593 TonB dependent receptor 498 739 2.1E-22 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 Gene3D G3DSA:2.170.130.10 122 218 1.2E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS00670 b9c93c5bdf5704c8b0b5c166405bd611 741 SUPERFAMILY SSF56935 128 741 1.39E-71 T 20-04-2016 APS56_RS02910 218ea021422d06d529e09bf57c8f8c3c 362 Pfam PF01594 Domain of unknown function DUF20 15 348 3.1E-46 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APS56_RS02910 218ea021422d06d529e09bf57c8f8c3c 362 PANTHER PTHR21716 14 354 2.2E-40 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 Gene3D G3DSA:1.10.1060.10 256 289 1.0E-5 T 20-04-2016 APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 SUPERFAMILY SSF54862 143 201 1.01E-14 T 20-04-2016 APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 Pfam PF04060 Putative Fe-S cluster 45 69 4.8E-9 T 20-04-2016 IPR007202 4Fe-4S domain GO:0051536 APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 Gene3D G3DSA:3.30.70.20 142 178 2.4E-12 T 20-04-2016 APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 Gene3D G3DSA:3.30.70.20 231 255 1.1E-10 T 20-04-2016 APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 Gene3D G3DSA:3.30.70.20 179 230 1.0E-10 T 20-04-2016 APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 222 233 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 251 262 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 174 185 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 Pfam PF00037 4Fe-4S binding domain 167 190 5.5E-8 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 SUPERFAMILY SSF54862 222 285 4.19E-15 T 20-04-2016 APS56_RS12490 c2b880c5971a69684fbd41af82dda9bf 296 Pfam PF12838 4Fe-4S dicluster domain 221 263 1.3E-6 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS15575 0f02e5dd13676d5905adf7ca26167f98 501 Pfam PF00884 Sulfatase 30 357 4.7E-56 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS15575 0f02e5dd13676d5905adf7ca26167f98 501 Pfam PF16347 Domain of unknown function (DUF4976) 359 442 4.2E-10 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS15575 0f02e5dd13676d5905adf7ca26167f98 501 SUPERFAMILY SSF53649 28 450 1.12E-117 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS15575 0f02e5dd13676d5905adf7ca26167f98 501 Gene3D G3DSA:3.40.720.10 27 376 3.2E-94 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS15575 0f02e5dd13676d5905adf7ca26167f98 501 PANTHER PTHR10342 2 127 6.3E-113 T 20-04-2016 APS56_RS15575 0f02e5dd13676d5905adf7ca26167f98 501 PANTHER PTHR10342 161 461 6.3E-113 T 20-04-2016 APS56_RS15575 0f02e5dd13676d5905adf7ca26167f98 501 Gene3D G3DSA:3.30.1120.10 380 452 4.8E-16 T 20-04-2016 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 PANTHER PTHR11019:SF45 28 279 5.9E-39 T 20-04-2016 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 Gene3D G3DSA:2.60.120.280 26 159 1.4E-8 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 PANTHER PTHR11019 28 279 5.9E-39 T 20-04-2016 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 SMART SM00342 193 276 1.2E-14 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 SUPERFAMILY SSF51215 28 159 1.44E-8 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 Gene3D G3DSA:1.10.10.60 231 278 1.8E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 Gene3D G3DSA:1.10.10.60 185 229 9.4E-4 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 SUPERFAMILY SSF46689 232 278 5.82E-10 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 Pfam PF02311 AraC-like ligand binding domain 31 78 7.1E-5 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APS56_RS11780 8bdb55b1fab1a46123aacbb7dbe82846 279 Pfam PF12833 Helix-turn-helix domain 199 277 2.7E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS14410 33e6c615ab4d8984a18e087852d08a79 63 PANTHER PTHR11544 1 63 1.8E-16 T 20-04-2016 APS56_RS14410 33e6c615ab4d8984a18e087852d08a79 63 SMART SM00357 3 63 1.3E-18 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APS56_RS14410 33e6c615ab4d8984a18e087852d08a79 63 PIRSF PIRSF002599 1 63 4.1E-16 T 20-04-2016 IPR012156 Cold shock, CspA GO:0003676 APS56_RS14410 33e6c615ab4d8984a18e087852d08a79 63 Gene3D G3DSA:2.40.50.140 1 63 2.3E-23 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14410 33e6c615ab4d8984a18e087852d08a79 63 Pfam PF00313 'Cold-shock' DNA-binding domain 3 62 2.2E-19 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS14410 33e6c615ab4d8984a18e087852d08a79 63 PRINTS PR00050 Cold shock protein signature 36 54 4.5E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS14410 33e6c615ab4d8984a18e087852d08a79 63 PRINTS PR00050 Cold shock protein signature 4 19 4.5E-10 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS14410 33e6c615ab4d8984a18e087852d08a79 63 SUPERFAMILY SSF50249 1 62 5.9E-20 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14235 2bc8d047ce260218ce4b3df7736e4437 466 Gene3D G3DSA:3.90.1300.10 3 464 4.8E-128 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APS56_RS14235 2bc8d047ce260218ce4b3df7736e4437 466 PANTHER PTHR11895:SF7 5 466 1.4E-136 T 20-04-2016 APS56_RS14235 2bc8d047ce260218ce4b3df7736e4437 466 Pfam PF01425 Amidase 33 456 1.6E-115 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APS56_RS14235 2bc8d047ce260218ce4b3df7736e4437 466 ProSitePatterns PS00571 Amidases signature. 147 178 - T 20-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APS56_RS14235 2bc8d047ce260218ce4b3df7736e4437 466 SUPERFAMILY SSF75304 4 464 2.35E-113 T 20-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APS56_RS14235 2bc8d047ce260218ce4b3df7736e4437 466 PANTHER PTHR11895 5 466 1.4E-136 T 20-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APS56_RS13540 654a4c5ca09bc7e300bd1a6d58828d01 510 SUPERFAMILY SSF48452 22 404 4.01E-49 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13540 654a4c5ca09bc7e300bd1a6d58828d01 510 SUPERFAMILY SSF48452 440 509 4.01E-49 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13540 654a4c5ca09bc7e300bd1a6d58828d01 510 Gene3D G3DSA:1.25.40.10 215 390 2.5E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13540 654a4c5ca09bc7e300bd1a6d58828d01 510 Pfam PF14322 Starch-binding associating with outer membrane 27 232 1.0E-36 T 20-04-2016 APS56_RS09380 643fd398ea1e3831e46a05b631c42c5d 326 Gene3D G3DSA:1.10.620.20 6 290 6.3E-114 T 20-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APS56_RS09380 643fd398ea1e3831e46a05b631c42c5d 326 PANTHER PTHR23409 6 326 1.1E-211 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APS56_RS09380 643fd398ea1e3831e46a05b631c42c5d 326 Pfam PF00268 Ribonucleotide reductase, small chain 15 282 1.9E-112 T 20-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APS56_RS09380 643fd398ea1e3831e46a05b631c42c5d 326 SUPERFAMILY SSF47240 4 307 2.58E-110 T 20-04-2016 IPR009078 Ferritin-like superfamily APS56_RS09380 643fd398ea1e3831e46a05b631c42c5d 326 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 105 121 - T 20-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APS56_RS04025 233fed0199883c153aec516e53b36176 317 Gene3D G3DSA:3.90.226.10 53 272 3.9E-47 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS04025 233fed0199883c153aec516e53b36176 317 SUPERFAMILY SSF52096 8 315 8.23E-93 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS04025 233fed0199883c153aec516e53b36176 317 PANTHER PTHR22855:SF42 1 315 1.0E-115 T 20-04-2016 APS56_RS04025 233fed0199883c153aec516e53b36176 317 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 315 4.3E-132 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS04025 233fed0199883c153aec516e53b36176 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 1.8E-42 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS04025 233fed0199883c153aec516e53b36176 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 1.8E-42 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS04025 233fed0199883c153aec516e53b36176 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 1.8E-42 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS04025 233fed0199883c153aec516e53b36176 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 1.8E-42 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS04025 233fed0199883c153aec516e53b36176 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 1.8E-42 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS04025 233fed0199883c153aec516e53b36176 317 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 1.8E-42 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS04025 233fed0199883c153aec516e53b36176 317 PANTHER PTHR22855 1 315 1.0E-115 T 20-04-2016 APS56_RS04025 233fed0199883c153aec516e53b36176 317 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 3 147 9.0E-60 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS04025 233fed0199883c153aec516e53b36176 317 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 3 315 46.327 T 20-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APS56_RS08355 6138954f6956adac55cc8d2c473adda1 151 Pfam PF09537 Domain of unknown function (DUF2383) 9 119 5.7E-34 T 20-04-2016 IPR019052 Domain of unknown function DUF2383 APS56_RS08355 6138954f6956adac55cc8d2c473adda1 151 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 10 147 2.7E-22 T 20-04-2016 IPR011971 Conserved hypothetical protein CHP02284 APS56_RS08355 6138954f6956adac55cc8d2c473adda1 151 Gene3D G3DSA:1.20.1260.10 6 132 6.9E-9 T 20-04-2016 IPR012347 Ferritin-related APS56_RS08355 6138954f6956adac55cc8d2c473adda1 151 SUPERFAMILY SSF47240 5 129 1.87E-8 T 20-04-2016 IPR009078 Ferritin-like superfamily APS56_RS01800 8dd6cfb95a8092ad6d48a8da2e877705 242 Gene3D G3DSA:3.90.550.10 1 241 7.1E-64 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS01800 8dd6cfb95a8092ad6d48a8da2e877705 242 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 242 34.716 T 20-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APS56_RS01800 8dd6cfb95a8092ad6d48a8da2e877705 242 Pfam PF02348 Cytidylyltransferase 5 216 5.4E-50 T 20-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APS56_RS01800 8dd6cfb95a8092ad6d48a8da2e877705 242 PANTHER PTHR21485:SF4 1 242 9.7E-82 T 20-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APS56_RS01800 8dd6cfb95a8092ad6d48a8da2e877705 242 PANTHER PTHR21485 1 242 9.7E-82 T 20-04-2016 APS56_RS01800 8dd6cfb95a8092ad6d48a8da2e877705 242 SUPERFAMILY SSF53448 3 241 5.63E-52 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS01800 8dd6cfb95a8092ad6d48a8da2e877705 242 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 235 6.1E-60 T 20-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APS56_RS06415 eaf456f57737210619fcea58e2db975f 322 Pfam PF02424 ApbE family 29 302 5.0E-78 T 20-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APS56_RS06415 eaf456f57737210619fcea58e2db975f 322 PIRSF PIRSF006268 1 320 1.8E-72 T 20-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APS56_RS06415 eaf456f57737210619fcea58e2db975f 322 PANTHER PTHR30040 4 310 2.0E-89 T 20-04-2016 APS56_RS06415 eaf456f57737210619fcea58e2db975f 322 SUPERFAMILY SSF143631 24 309 1.2E-81 T 20-04-2016 IPR003374 ApbE-like domain APS56_RS06415 eaf456f57737210619fcea58e2db975f 322 PANTHER PTHR30040:SF3 4 310 2.0E-89 T 20-04-2016 APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 210 345 1.5E-42 T 20-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 PANTHER PTHR18968:SF116 1 577 1.5E-271 T 20-04-2016 APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 SUPERFAMILY SSF52518 383 573 1.31E-62 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 20 187 1.2E-54 T 20-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 Gene3D G3DSA:3.40.50.970 378 574 1.5E-66 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 Gene3D G3DSA:3.40.50.1220 204 365 2.9E-57 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 443 462 - T 20-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 SUPERFAMILY SSF52467 203 364 7.7E-55 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 SUPERFAMILY SSF52518 15 192 1.18E-59 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 406 553 1.0E-47 T 20-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 Gene3D G3DSA:3.40.50.970 17 192 1.5E-70 T 20-04-2016 IPR029061 Thiamin diphosphate-binding fold APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 20 574 6.4E-214 T 20-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APS56_RS08765 4eefd2170d3011751a00a2e29b75fe0b 577 PANTHER PTHR18968 1 577 1.5E-271 T 20-04-2016 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 SUPERFAMILY SSF63418 5 101 2.49E-19 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 Pfam PF01225 Mur ligase family, catalytic domain 24 98 4.4E-9 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 SUPERFAMILY SSF53623 101 322 3.4E-68 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 Gene3D G3DSA:3.40.1390.10 7 99 1.3E-21 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 PANTHER PTHR23135 11 487 6.8E-177 T 20-04-2016 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 482 5.3E-153 T 20-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 482 32.564 T 20-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 Gene3D G3DSA:3.40.1190.10 101 329 2.1E-69 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 Gene3D G3DSA:3.90.190.20 330 474 3.9E-51 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 Pfam PF08245 Mur ligase middle domain 110 305 3.0E-46 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 PANTHER PTHR23135:SF4 11 487 6.8E-177 T 20-04-2016 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 412 1.9E-20 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS08480 faddcf593b9546c3356f0f32feb57e4a 487 SUPERFAMILY SSF53244 326 484 4.97E-45 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS09085 0e8c7f0890ea39d92ecb65aa379f8fe1 301 PANTHER PTHR11048:SF27 28 301 1.7E-14 T 20-04-2016 APS56_RS09085 0e8c7f0890ea39d92ecb65aa379f8fe1 301 Pfam PF01040 UbiA prenyltransferase family 54 266 5.0E-25 T 20-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APS56_RS09085 0e8c7f0890ea39d92ecb65aa379f8fe1 301 PANTHER PTHR11048 28 301 1.7E-14 T 20-04-2016 APS56_RS16310 c57c482aa2307af475e2fa0cfb94a0fd 132 SUPERFAMILY SSF54637 6 131 1.87E-41 T 20-04-2016 IPR029069 HotDog domain APS56_RS16310 c57c482aa2307af475e2fa0cfb94a0fd 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 8 120 8.7E-30 T 20-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APS56_RS16310 c57c482aa2307af475e2fa0cfb94a0fd 132 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 9 26 - T 20-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 APS56_RS16310 c57c482aa2307af475e2fa0cfb94a0fd 132 PANTHER PTHR31793 5 132 3.6E-46 T 20-04-2016 APS56_RS16310 c57c482aa2307af475e2fa0cfb94a0fd 132 PIRSF PIRSF003230 1 132 1.6E-41 T 20-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APS56_RS16310 c57c482aa2307af475e2fa0cfb94a0fd 132 Pfam PF13279 Thioesterase-like superfamily 10 129 1.9E-14 T 20-04-2016 APS56_RS16310 c57c482aa2307af475e2fa0cfb94a0fd 132 Gene3D G3DSA:3.10.129.10 5 131 4.5E-46 T 20-04-2016 IPR029069 HotDog domain APS56_RS16310 c57c482aa2307af475e2fa0cfb94a0fd 132 PANTHER PTHR31793:SF9 5 132 3.6E-46 T 20-04-2016 APS56_RS13475 fd9a98dc3720716dd70b23ced556e473 109 SUPERFAMILY SSF46955 11 105 4.17E-18 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS13475 fd9a98dc3720716dd70b23ced556e473 109 PANTHER PTHR30204:SF15 3 109 1.1E-22 T 20-04-2016 APS56_RS13475 fd9a98dc3720716dd70b23ced556e473 109 PANTHER PTHR30204 3 109 1.1E-22 T 20-04-2016 APS56_RS13475 fd9a98dc3720716dd70b23ced556e473 109 Gene3D G3DSA:1.10.1660.10 11 104 3.6E-18 T 20-04-2016 APS56_RS13475 fd9a98dc3720716dd70b23ced556e473 109 Pfam PF13411 MerR HTH family regulatory protein 11 79 3.2E-23 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APS56_RS13475 fd9a98dc3720716dd70b23ced556e473 109 SMART SM00422 11 81 4.2E-8 T 20-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APS56_RS06780 10b54d7dd7a8d598953984bae5c6e1cd 308 PANTHER PTHR30294:SF20 245 307 1.8E-50 T 20-04-2016 APS56_RS06780 10b54d7dd7a8d598953984bae5c6e1cd 308 PANTHER PTHR30294:SF20 1 209 1.8E-50 T 20-04-2016 APS56_RS06780 10b54d7dd7a8d598953984bae5c6e1cd 308 PANTHER PTHR30294 245 307 1.8E-50 T 20-04-2016 APS56_RS06780 10b54d7dd7a8d598953984bae5c6e1cd 308 PANTHER PTHR30294 1 209 1.8E-50 T 20-04-2016 APS56_RS06780 10b54d7dd7a8d598953984bae5c6e1cd 308 Pfam PF12679 ABC-2 family transporter protein 2 305 8.1E-31 T 20-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 135 1.1E-17 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 SUPERFAMILY SSF51735 2 169 1.28E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 PANTHER PTHR22604 1 381 7.7E-66 T 20-04-2016 APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 PANTHER PTHR22604:SF123 1 381 7.7E-66 T 20-04-2016 APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 149 269 3.6E-7 T 20-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 SUPERFAMILY SSF55347 142 323 7.85E-37 T 20-04-2016 APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 Gene3D G3DSA:3.30.360.10 325 374 5.5E-37 T 20-04-2016 APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 Gene3D G3DSA:3.30.360.10 157 279 5.5E-37 T 20-04-2016 APS56_RS07525 3280d659b03b2ba2544f82a11b18a197 381 Gene3D G3DSA:3.40.50.720 1 156 2.3E-36 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10750 6b8841441fb07effd71041b6d2fb51fd 328 PANTHER PTHR10366 3 307 1.7E-126 T 20-04-2016 APS56_RS10750 6b8841441fb07effd71041b6d2fb51fd 328 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 301 2.8E-48 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10750 6b8841441fb07effd71041b6d2fb51fd 328 PANTHER PTHR10366:SF399 3 307 1.7E-126 T 20-04-2016 APS56_RS10750 6b8841441fb07effd71041b6d2fb51fd 328 Gene3D G3DSA:3.40.50.720 1 171 3.7E-53 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10750 6b8841441fb07effd71041b6d2fb51fd 328 SUPERFAMILY SSF51735 1 308 3.59E-82 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10750 6b8841441fb07effd71041b6d2fb51fd 328 Gene3D G3DSA:3.90.25.10 172 310 1.3E-49 T 20-04-2016 APS56_RS00395 d16bb454fbcac194fb094e1cb5b95585 338 Gene3D G3DSA:1.10.10.60 281 332 3.2E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS00395 d16bb454fbcac194fb094e1cb5b95585 338 Pfam PF12833 Helix-turn-helix domain 254 329 1.8E-14 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS00395 d16bb454fbcac194fb094e1cb5b95585 338 SUPERFAMILY SSF46689 281 331 5.38E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS00395 d16bb454fbcac194fb094e1cb5b95585 338 PANTHER PTHR11019 190 336 3.1E-21 T 20-04-2016 APS56_RS00395 d16bb454fbcac194fb094e1cb5b95585 338 PANTHER PTHR11019:SF61 190 336 3.1E-21 T 20-04-2016 APS56_RS00395 d16bb454fbcac194fb094e1cb5b95585 338 SMART SM00342 245 328 5.7E-14 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS12495 cd841ae43bff98d45fecacda8c28dfeb 142 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 19 138 4.8E-24 T 20-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC APS56_RS16305 74756e40ea4239771ce4404425b82880 475 SUPERFAMILY SSF52540 139 348 9.76E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16305 74756e40ea4239771ce4404425b82880 475 Pfam PF11638 DnaA N-terminal domain 6 68 1.9E-19 T 20-04-2016 IPR024633 DnaA N-terminal domain APS56_RS16305 74756e40ea4239771ce4404425b82880 475 Gene3D G3DSA:1.10.8.60 306 374 2.9E-28 T 20-04-2016 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 SMART SM00760 383 452 2.0E-29 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 Gene3D G3DSA:1.10.1750.10 375 474 4.5E-34 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 205 219 5.3E-44 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 173 193 5.3E-44 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 237 251 5.3E-44 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 271 298 5.3E-44 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 433 452 5.3E-44 T 20-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APS56_RS16305 74756e40ea4239771ce4404425b82880 475 SUPERFAMILY SSF48295 370 473 1.1E-30 T 20-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 474 30.013 T 20-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 Pfam PF00308 Bacterial dnaA protein 139 357 8.0E-84 T 20-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APS56_RS16305 74756e40ea4239771ce4404425b82880 475 Gene3D G3DSA:3.40.50.300 130 303 3.4E-54 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PANTHER PTHR30050:SF2 4 109 1.3E-176 T 20-04-2016 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PANTHER PTHR30050:SF2 137 475 1.3E-176 T 20-04-2016 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 473 6.0E-156 T 20-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PANTHER PTHR30050 4 109 1.3E-176 T 20-04-2016 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 PANTHER PTHR30050 137 475 1.3E-176 T 20-04-2016 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 ProSitePatterns PS01008 DnaA protein signature. 433 452 - T 20-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APS56_RS16305 74756e40ea4239771ce4404425b82880 475 SMART SM00382 172 308 4.1E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS16305 74756e40ea4239771ce4404425b82880 475 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 384 452 1.5E-25 T 20-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 PANTHER PTHR19136 5 265 2.9E-73 T 20-04-2016 APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 123 156 0.001 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 Gene3D G3DSA:1.10.166.10 1 66 6.4E-27 T 20-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 PANTHER PTHR19136:SF52 5 265 2.9E-73 T 20-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 Gene3D G3DSA:2.160.10.10 85 249 7.0E-52 T 20-04-2016 APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 SUPERFAMILY SSF51161 5 248 1.94E-64 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 20-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 199 5.9E-11 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS04180 8d661aa6e38b2daf92aa1a76d77b402a 271 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 65 2.8E-23 T 20-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APS56_RS07520 a6fb2a6b7e9764da2c612c796fec85eb 350 SUPERFAMILY SSF51658 9 323 6.5E-55 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS07520 a6fb2a6b7e9764da2c612c796fec85eb 350 PANTHER PTHR12110 99 338 9.8E-28 T 20-04-2016 APS56_RS07520 a6fb2a6b7e9764da2c612c796fec85eb 350 PANTHER PTHR12110 27 80 9.8E-28 T 20-04-2016 APS56_RS07520 a6fb2a6b7e9764da2c612c796fec85eb 350 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 1.5E-20 T 20-04-2016 IPR011418 AP endonuclease, family 2, C-terminal APS56_RS07520 a6fb2a6b7e9764da2c612c796fec85eb 350 PANTHER PTHR12110:SF17 99 338 9.8E-28 T 20-04-2016 APS56_RS07520 a6fb2a6b7e9764da2c612c796fec85eb 350 PANTHER PTHR12110:SF17 27 80 9.8E-28 T 20-04-2016 APS56_RS07520 a6fb2a6b7e9764da2c612c796fec85eb 350 Pfam PF01261 Xylose isomerase-like TIM barrel 29 279 3.5E-35 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS07520 a6fb2a6b7e9764da2c612c796fec85eb 350 Gene3D G3DSA:3.20.20.150 8 324 1.2E-65 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 Gene3D G3DSA:1.10.10.60 236 284 1.2E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 Pfam PF12833 Helix-turn-helix domain 205 283 3.4E-20 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 PANTHER PTHR11019 35 134 5.7E-38 T 20-04-2016 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 PANTHER PTHR11019 153 290 5.7E-38 T 20-04-2016 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 Gene3D G3DSA:1.10.10.60 180 235 4.1E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 Gene3D G3DSA:2.60.120.10 34 105 1.6E-6 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 PANTHER PTHR11019:SF65 35 134 5.7E-38 T 20-04-2016 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 PANTHER PTHR11019:SF65 153 290 5.7E-38 T 20-04-2016 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 SUPERFAMILY SSF46689 183 231 8.96E-6 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 SUPERFAMILY SSF46689 235 285 8.96E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 SMART SM00342 199 282 9.6E-23 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS10360 7c4921b7c30ddad687a17389749da0f4 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS04575 514b8cd40c26d9adbef97fdb27b8b73a 510 Pfam PF07980 SusD family 256 510 2.5E-34 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS04575 514b8cd40c26d9adbef97fdb27b8b73a 510 Gene3D G3DSA:1.25.40.10 348 436 2.5E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04575 514b8cd40c26d9adbef97fdb27b8b73a 510 Gene3D G3DSA:1.25.40.10 195 309 2.5E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04575 514b8cd40c26d9adbef97fdb27b8b73a 510 SUPERFAMILY SSF48452 15 510 5.69E-101 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04575 514b8cd40c26d9adbef97fdb27b8b73a 510 Pfam PF14322 Starch-binding associating with outer membrane 83 214 2.8E-12 T 20-04-2016 APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 Gene3D G3DSA:3.40.50.300 311 539 6.0E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 PANTHER PTHR19211 4 560 1.2E-175 T 20-04-2016 APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 SUPERFAMILY SSF52540 301 512 3.01E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 Pfam PF00005 ABC transporter 328 463 7.1E-22 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 Pfam PF00005 ABC transporter 20 180 1.0E-24 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 Pfam PF16326 ABC transporter C-terminal domain 550 615 2.1E-12 T 20-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 SMART SM00382 28 224 1.2E-8 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 SMART SM00382 337 516 5.0E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 Pfam PF12848 ABC transporter 219 295 1.3E-10 T 20-04-2016 IPR032781 ABC-transporter extension domain APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 SUPERFAMILY SSF52540 121 237 7.96E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 SUPERFAMILY SSF52540 4 94 7.96E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05415 6ccb764511cc6384b23924b38ce27dbf 619 Gene3D G3DSA:3.40.50.300 4 277 1.9E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS09145 de1593d1eacc242fbe92c796d043fc9c 143 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 3.2E-27 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APS56_RS09145 de1593d1eacc242fbe92c796d043fc9c 143 Gene3D G3DSA:1.10.10.10 1 134 1.2E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS09145 de1593d1eacc242fbe92c796d043fc9c 143 Pfam PF02082 Transcriptional regulator 1 82 2.6E-16 T 20-04-2016 IPR000944 Transcription regulator Rrf2-type APS56_RS09145 de1593d1eacc242fbe92c796d043fc9c 143 SUPERFAMILY SSF46785 1 131 2.31E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS09145 de1593d1eacc242fbe92c796d043fc9c 143 PANTHER PTHR33221 1 131 2.9E-24 T 20-04-2016 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 278 294 1.1E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 278 1.1E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 Gene3D G3DSA:1.10.10.60 248 295 5.4E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 SMART SM00342 211 294 2.8E-23 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 SUPERFAMILY SSF46689 248 295 8.06E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 SUPERFAMILY SSF46689 194 245 4.21E-5 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 Gene3D G3DSA:1.10.10.60 193 247 5.6E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 PANTHER PTHR11019 194 293 6.6E-21 T 20-04-2016 APS56_RS15050 54eaeafe4fece6b83be34c899887b00b 299 Pfam PF12833 Helix-turn-helix domain 220 294 1.8E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS09645 f46826581f573f86292422f956d16d27 334 Pfam PF04773 FecR protein 126 213 1.7E-15 T 20-04-2016 IPR006860 FecR protein APS56_RS09645 f46826581f573f86292422f956d16d27 334 PANTHER PTHR30273:SF2 30 332 2.3E-61 T 20-04-2016 APS56_RS09645 f46826581f573f86292422f956d16d27 334 Pfam PF16344 Domain of unknown function (DUF4974) 226 321 1.9E-21 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS09645 f46826581f573f86292422f956d16d27 334 PANTHER PTHR30273 30 332 2.3E-61 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS08050 3aec5fc8496c22888b5bbc1438a5c99b 139 SUPERFAMILY SSF51230 65 139 3.8E-20 T 20-04-2016 IPR011053 Single hybrid motif APS56_RS08050 3aec5fc8496c22888b5bbc1438a5c99b 139 PANTHER PTHR18866:SF104 2 139 4.1E-19 T 20-04-2016 APS56_RS08050 3aec5fc8496c22888b5bbc1438a5c99b 139 PANTHER PTHR18866 2 139 4.1E-19 T 20-04-2016 APS56_RS08050 3aec5fc8496c22888b5bbc1438a5c99b 139 Gene3D G3DSA:2.40.50.100 69 139 1.1E-22 T 20-04-2016 APS56_RS08050 3aec5fc8496c22888b5bbc1438a5c99b 139 Pfam PF00364 Biotin-requiring enzyme 72 138 2.1E-15 T 20-04-2016 IPR000089 Biotin/lipoyl attachment APS56_RS08050 3aec5fc8496c22888b5bbc1438a5c99b 139 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 95 112 - T 20-04-2016 IPR001882 Biotin-binding site APS56_RS03800 7a5138997680ea1498b129f0af36aea1 412 Gene3D G3DSA:1.50.10.10 35 402 8.2E-136 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS03800 7a5138997680ea1498b129f0af36aea1 412 Pfam PF07470 Glycosyl Hydrolase Family 88 77 398 7.3E-25 T 20-04-2016 IPR010905 Glycosyl hydrolase, family 88 APS56_RS03800 7a5138997680ea1498b129f0af36aea1 412 PANTHER PTHR36845 1 400 3.2E-83 T 20-04-2016 APS56_RS03800 7a5138997680ea1498b129f0af36aea1 412 SUPERFAMILY SSF48208 55 400 8.85E-100 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS03800 7a5138997680ea1498b129f0af36aea1 412 PANTHER PTHR36845:SF1 1 400 3.2E-83 T 20-04-2016 APS56_RS09885 a43a4ee53c28dc47ae436cab987880fb 555 SUPERFAMILY SSF75005 25 312 9.16E-59 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09885 a43a4ee53c28dc47ae436cab987880fb 555 Pfam PF04616 Glycosyl hydrolases family 43 41 311 7.9E-43 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS09885 a43a4ee53c28dc47ae436cab987880fb 555 Gene3D G3DSA:2.115.10.20 30 312 6.7E-66 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09885 a43a4ee53c28dc47ae436cab987880fb 555 PANTHER PTHR22925 34 314 4.1E-64 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS09885 a43a4ee53c28dc47ae436cab987880fb 555 SUPERFAMILY SSF49695 324 405 6.55E-9 T 20-04-2016 IPR011024 Gamma-crystallin-related APS56_RS09885 a43a4ee53c28dc47ae436cab987880fb 555 PANTHER PTHR22925:SF42 34 314 4.1E-64 T 20-04-2016 APS56_RS09885 a43a4ee53c28dc47ae436cab987880fb 555 Gene3D G3DSA:2.60.20.10 324 407 1.1E-18 T 20-04-2016 APS56_RS13530 111ff39069e96f7b1b4cd1799f572462 199 PANTHER PTHR10954 14 189 1.3E-63 T 20-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APS56_RS13530 111ff39069e96f7b1b4cd1799f572462 199 Pfam PF01351 Ribonuclease HII 13 189 3.0E-39 T 20-04-2016 IPR024567 Ribonuclease HII/HIII domain APS56_RS13530 111ff39069e96f7b1b4cd1799f572462 199 Gene3D G3DSA:3.30.420.10 13 152 5.8E-45 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS13530 111ff39069e96f7b1b4cd1799f572462 199 SUPERFAMILY SSF53098 6 196 2.28E-66 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS13530 111ff39069e96f7b1b4cd1799f572462 199 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 191 34.498 T 20-04-2016 IPR022898 Ribonuclease HII GO:0004523 APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 Gene3D G3DSA:1.10.3810.10 64 224 3.5E-51 T 20-04-2016 APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 690 776 1.2E-16 T 20-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 Pfam PF00905 Penicillin binding protein transpeptidase domain 301 560 1.4E-13 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 Pfam PF00912 Transglycosylase 64 222 4.3E-49 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 Gene3D G3DSA:3.40.710.10 225 634 4.2E-71 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 SUPERFAMILY SSF53955 36 256 2.73E-61 T 20-04-2016 IPR023346 Lysozyme-like domain APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 SUPERFAMILY SSF56601 205 647 4.23E-79 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 32 781 9.1E-210 T 20-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 PANTHER PTHR32282 29 696 8.9E-154 T 20-04-2016 APS56_RS11470 ed47b5325d64154182c1651027e31a8b 783 PANTHER PTHR32282:SF0 29 696 8.9E-154 T 20-04-2016 APS56_RS14685 758786d796c3a536ff5b240ead0aaaf8 319 Pfam PF13533 Biotin-lipoyl like 35 83 3.0E-10 T 20-04-2016 APS56_RS14685 758786d796c3a536ff5b240ead0aaaf8 319 SUPERFAMILY SSF111369 105 158 4.32E-5 T 20-04-2016 APS56_RS14685 758786d796c3a536ff5b240ead0aaaf8 319 Gene3D G3DSA:2.40.50.100 191 225 3.8E-10 T 20-04-2016 APS56_RS14685 758786d796c3a536ff5b240ead0aaaf8 319 Gene3D G3DSA:2.40.50.100 36 67 3.8E-10 T 20-04-2016 APS56_RS14685 758786d796c3a536ff5b240ead0aaaf8 319 SUPERFAMILY SSF111369 34 91 6.02E-6 T 20-04-2016 APS56_RS14685 758786d796c3a536ff5b240ead0aaaf8 319 PANTHER PTHR30438 22 308 2.9E-44 T 20-04-2016 APS56_RS14685 758786d796c3a536ff5b240ead0aaaf8 319 PANTHER PTHR30438:SF1 22 308 2.9E-44 T 20-04-2016 APS56_RS09015 feb8d43e61c1057ce69798ea51abe90d 179 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 6 164 34.584 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS09015 feb8d43e61c1057ce69798ea51abe90d 179 PANTHER PTHR10173:SF34 7 160 8.3E-78 T 20-04-2016 APS56_RS09015 feb8d43e61c1057ce69798ea51abe90d 179 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 8 159 1.4E-55 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS09015 feb8d43e61c1057ce69798ea51abe90d 179 PANTHER PTHR10173 7 160 8.3E-78 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APS56_RS09015 feb8d43e61c1057ce69798ea51abe90d 179 Pfam PF01625 Peptide methionine sulfoxide reductase 9 160 1.3E-60 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS09015 feb8d43e61c1057ce69798ea51abe90d 179 SUPERFAMILY SSF55068 3 171 2.09E-70 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS09015 feb8d43e61c1057ce69798ea51abe90d 179 Gene3D G3DSA:3.30.1060.10 3 159 2.6E-67 T 20-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APS56_RS00775 bcb685f4f35e0905bc20528937f83cbe 653 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 64 197 1.6E-12 T 20-04-2016 IPR024618 Domain of unknown function DUF3857 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Gene3D G3DSA:2.170.130.10 109 223 9.0E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 SUPERFAMILY SSF49464 21 102 2.09E-19 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 200 230 1.5E-15 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 PANTHER PTHR11532:SF57 589 1070 2.7E-244 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 PANTHER PTHR11532:SF57 325 439 2.7E-244 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 PANTHER PTHR11532:SF57 532 558 2.7E-244 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 PANTHER PTHR11532:SF57 19 302 2.7E-244 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Pfam PF13715 CarboxypepD_reg-like domain 23 104 8.1E-20 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Pfam PF07715 TonB-dependent Receptor Plug Domain 112 224 2.9E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 PANTHER PTHR11532 589 1070 2.7E-244 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 PANTHER PTHR11532 325 439 2.7E-244 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 PANTHER PTHR11532 532 558 2.7E-244 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 PANTHER PTHR11532 19 302 2.7E-244 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Gene3D G3DSA:2.40.170.20 335 406 3.1E-34 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Gene3D G3DSA:2.40.170.20 890 926 3.1E-34 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Gene3D G3DSA:2.40.170.20 455 812 3.1E-34 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Gene3D G3DSA:2.40.170.20 224 245 3.1E-34 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Gene3D G3DSA:2.40.170.20 984 1019 3.1E-34 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 22 1072 8.4E-252 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Pfam PF00593 TonB dependent receptor 634 1070 1.4E-12 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 SUPERFAMILY SSF56935 881 924 1.01E-77 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 SUPERFAMILY SSF56935 453 799 1.01E-77 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 SUPERFAMILY SSF56935 979 1072 1.01E-77 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 SUPERFAMILY SSF56935 100 250 1.01E-77 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 SUPERFAMILY SSF56935 330 420 1.01E-77 T 20-04-2016 APS56_RS03105 fcb317420891bd3f283c39baa0efb929 1072 Gene3D G3DSA:2.60.40.1120 23 108 4.5E-16 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS04715 c2c8373a5e90447ff34b10269804fb4d 530 Gene3D G3DSA:3.40.50.300 81 175 4.1E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04715 c2c8373a5e90447ff34b10269804fb4d 530 Gene3D G3DSA:3.40.50.300 302 490 4.1E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04715 c2c8373a5e90447ff34b10269804fb4d 530 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 106 463 2.3E-14 T 20-04-2016 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 APS56_RS04715 c2c8373a5e90447ff34b10269804fb4d 530 SUPERFAMILY SSF52540 68 495 1.01E-23 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11545 fc44592e8555b8203883b5a5aff9767a 208 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 41 48 - T 20-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS11545 fc44592e8555b8203883b5a5aff9767a 208 Gene3D G3DSA:3.40.1050.10 2 197 5.4E-74 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS11545 fc44592e8555b8203883b5a5aff9767a 208 SUPERFAMILY SSF53056 3 197 2.22E-72 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS11545 fc44592e8555b8203883b5a5aff9767a 208 SMART SM00947 29 191 1.5E-57 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS11545 fc44592e8555b8203883b5a5aff9767a 208 PANTHER PTHR11002 3 206 9.0E-120 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS11545 fc44592e8555b8203883b5a5aff9767a 208 Pfam PF00484 Carbonic anhydrase 37 187 5.1E-53 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS11545 fc44592e8555b8203883b5a5aff9767a 208 PANTHER PTHR11002:SF16 3 206 9.0E-120 T 20-04-2016 APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 Gene3D G3DSA:3.60.20.10 365 588 3.1E-52 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 Gene3D G3DSA:3.60.20.10 184 283 3.1E-52 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 Gene3D G3DSA:2.30.120.10 286 341 5.4E-4 T 20-04-2016 APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 PANTHER PTHR34218 507 759 1.5E-60 T 20-04-2016 APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 Gene3D G3DSA:1.10.439.10 7 154 1.2E-30 T 20-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 PANTHER PTHR34218 10 489 1.5E-60 T 20-04-2016 APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 PANTHER PTHR34218:SF3 10 489 1.5E-60 T 20-04-2016 APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 PANTHER PTHR34218:SF3 507 759 1.5E-60 T 20-04-2016 APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 SUPERFAMILY SSF56235 11 167 6.95E-101 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 SUPERFAMILY SSF56235 196 748 6.95E-101 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS11975 a3a6e6986a0a7358866676ffeec5da10 760 Pfam PF01804 Penicillin amidase 12 745 2.2E-87 T 20-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 APS56_RS07595 5b2e0aba8922471d25ee12cf202f789a 690 Gene3D G3DSA:3.40.640.10 259 495 2.6E-5 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS00600 b29a69149c3371dd136230988269503f 531 Pfam PF00149 Calcineurin-like phosphoesterase 125 329 2.0E-15 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS00600 b29a69149c3371dd136230988269503f 531 PANTHER PTHR22953 30 331 7.2E-34 T 20-04-2016 APS56_RS00600 b29a69149c3371dd136230988269503f 531 SUPERFAMILY SSF56300 122 383 2.58E-32 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS00600 b29a69149c3371dd136230988269503f 531 Gene3D G3DSA:2.60.40.380 37 117 4.9E-12 T 20-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 APS56_RS00600 b29a69149c3371dd136230988269503f 531 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 38 115 3.8E-10 T 20-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 APS56_RS00600 b29a69149c3371dd136230988269503f 531 PANTHER PTHR22953:SF0 30 331 7.2E-34 T 20-04-2016 APS56_RS00600 b29a69149c3371dd136230988269503f 531 Gene3D G3DSA:2.60.40.10 486 530 3.6E-7 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS00600 b29a69149c3371dd136230988269503f 531 Gene3D G3DSA:3.60.21.10 121 417 1.2E-40 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS00600 b29a69149c3371dd136230988269503f 531 SUPERFAMILY SSF49363 18 117 1.57E-15 T 20-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 APS56_RS00600 b29a69149c3371dd136230988269503f 531 SUPERFAMILY SSF49265 478 530 9.18E-7 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 Pfam PF08281 Sigma-70, region 4 124 173 1.2E-10 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 PANTHER PTHR30173:SF20 1 179 2.1E-48 T 20-04-2016 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 SUPERFAMILY SSF88659 111 179 2.43E-12 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 25 179 1.8E-27 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 Gene3D G3DSA:1.10.1740.10 12 95 3.5E-22 T 20-04-2016 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 25 179 7.9E-41 T 20-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 PANTHER PTHR30173 1 179 2.1E-48 T 20-04-2016 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 SUPERFAMILY SSF88946 13 99 8.24E-21 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 Pfam PF04542 Sigma-70 region 2 30 93 1.1E-11 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15020 0108a34d38e4fc6860ccd5053ff99816 187 Gene3D G3DSA:1.10.10.10 116 179 6.7E-14 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS04195 b27a1f6c9831bb1868009d34c1d06bfb 338 Pfam PF00534 Glycosyl transferases group 1 178 310 1.2E-17 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS04195 b27a1f6c9831bb1868009d34c1d06bfb 338 SUPERFAMILY SSF53756 103 335 2.12E-38 T 20-04-2016 APS56_RS04195 b27a1f6c9831bb1868009d34c1d06bfb 338 PANTHER PTHR12526 127 337 8.6E-26 T 20-04-2016 APS56_RS04195 b27a1f6c9831bb1868009d34c1d06bfb 338 Gene3D G3DSA:3.40.50.2000 178 296 1.1E-14 T 20-04-2016 APS56_RS15395 89991301c8c764d432d3eb5609043071 381 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 4 379 5.8E-137 T 20-04-2016 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255|UniPathway: UPA01014 APS56_RS15395 89991301c8c764d432d3eb5609043071 381 Gene3D G3DSA:3.90.1580.10 165 309 1.2E-31 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS15395 89991301c8c764d432d3eb5609043071 381 Gene3D G3DSA:3.90.1580.10 310 379 3.7E-13 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS15395 89991301c8c764d432d3eb5609043071 381 Pfam PF12867 DinB superfamily 9 135 8.3E-7 T 20-04-2016 IPR024775 DinB-like domain APS56_RS15395 89991301c8c764d432d3eb5609043071 381 SUPERFAMILY SSF56436 170 379 2.59E-54 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS15395 89991301c8c764d432d3eb5609043071 381 PANTHER PTHR23150 3 379 3.2E-78 T 20-04-2016 APS56_RS15395 89991301c8c764d432d3eb5609043071 381 PANTHER PTHR23150:SF24 3 379 3.2E-78 T 20-04-2016 APS56_RS15395 89991301c8c764d432d3eb5609043071 381 Pfam PF03781 Sulfatase-modifying factor enzyme 1 170 304 1.6E-17 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 PANTHER PTHR22550 9 332 2.0E-62 T 20-04-2016 APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 SUPERFAMILY SSF53300 86 227 1.81E-34 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 SUPERFAMILY SSF53300 257 291 1.81E-34 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 Gene3D G3DSA:3.40.50.410 86 292 9.4E-31 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 PRINTS PR00453 Von Willebrand factor type A domain signature 192 200 5.2E-5 T 20-04-2016 APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 PRINTS PR00453 Von Willebrand factor type A domain signature 90 107 5.2E-5 T 20-04-2016 APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 PRINTS PR00453 Von Willebrand factor type A domain signature 130 144 5.2E-5 T 20-04-2016 APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 Pfam PF00092 von Willebrand factor type A domain 91 231 3.6E-23 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 PANTHER PTHR22550:SF8 9 332 2.0E-62 T 20-04-2016 APS56_RS11525 8a9265fcdecaf8743d6f9a6b2d4f5219 345 SMART SM00327 89 258 4.4E-22 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS15685 b68f11f769679794abfe0c2411c32673 404 PANTHER PTHR12526:SF397 112 389 1.2E-17 T 20-04-2016 APS56_RS15685 b68f11f769679794abfe0c2411c32673 404 Gene3D G3DSA:3.40.50.2000 205 363 9.7E-12 T 20-04-2016 APS56_RS15685 b68f11f769679794abfe0c2411c32673 404 Pfam PF00534 Glycosyl transferases group 1 203 367 1.8E-19 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS15685 b68f11f769679794abfe0c2411c32673 404 PANTHER PTHR12526 112 389 1.2E-17 T 20-04-2016 APS56_RS15685 b68f11f769679794abfe0c2411c32673 404 SUPERFAMILY SSF53756 19 387 2.51E-35 T 20-04-2016 APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 Pfam PF00691 OmpA family 528 619 1.6E-20 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 Gene3D G3DSA:2.120.10.30 166 369 7.0E-12 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 Pfam PF07676 WD40-like Beta Propeller Repeat 330 366 5.9E-4 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 Pfam PF07676 WD40-like Beta Propeller Repeat 217 240 2.3E-4 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 Pfam PF07676 WD40-like Beta Propeller Repeat 287 313 3.7E-7 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 SUPERFAMILY SSF48452 10 120 4.8E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 SUPERFAMILY SSF82171 139 366 8.89E-16 T 20-04-2016 APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 Gene3D G3DSA:3.30.1330.60 521 637 1.5E-34 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 Gene3D G3DSA:2.60.40.10 432 502 7.0E-7 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 Gene3D G3DSA:1.25.40.10 21 138 6.2E-12 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 SUPERFAMILY SSF103088 517 635 1.7E-28 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 SUPERFAMILY SSF49478 432 501 2.79E-7 T 20-04-2016 APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 PANTHER PTHR30128 521 636 2.6E-35 T 20-04-2016 APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 PRINTS PR01021 OMPA domain signature 529 551 1.1E-13 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 PRINTS PR01021 OMPA domain signature 559 574 1.1E-13 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS01720 0544a1d7a33d73b9ae7da0d982384518 639 PRINTS PR01021 OMPA domain signature 574 590 1.1E-13 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 187 209 9.4E-28 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 220 232 9.4E-28 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 166 181 9.4E-28 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 9.4E-28 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 Gene3D G3DSA:3.10.290.10 321 430 1.0E-22 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 Pfam PF00579 tRNA synthetases class I (W and Y) 33 327 1.2E-83 T 20-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 430 43.292 T 20-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 SUPERFAMILY SSF55174 334 429 3.79E-14 T 20-04-2016 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 3 430 6.4E-123 T 20-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 Gene3D G3DSA:3.40.50.620 2 236 1.9E-98 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 PANTHER PTHR11766:SF0 3 430 5.5E-196 T 20-04-2016 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 SUPERFAMILY SSF52374 3 327 8.26E-99 T 20-04-2016 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 PANTHER PTHR11766 3 430 5.5E-196 T 20-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 20-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS12350 7c477454247d0e5ddcdf9e6b12578134 431 Gene3D G3DSA:1.10.240.10 237 320 4.9E-42 T 20-04-2016 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 SUPERFAMILY SSF103088 572 694 6.67E-37 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 Pfam PF00691 OmpA family 594 689 7.5E-24 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 PANTHER PTHR30128:SF10 515 695 2.7E-44 T 20-04-2016 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 678 697 1.5E-6 T 20-04-2016 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 658 677 1.5E-6 T 20-04-2016 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 640 657 1.5E-6 T 20-04-2016 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 PRINTS PR01021 OMPA domain signature 595 617 2.2E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 PRINTS PR01021 OMPA domain signature 640 656 2.2E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 PRINTS PR01021 OMPA domain signature 625 640 2.2E-12 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 PANTHER PTHR30128 515 695 2.7E-44 T 20-04-2016 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 SUPERFAMILY SSF103647 452 534 7.85E-10 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 Gene3D G3DSA:3.30.1330.60 579 696 2.7E-40 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS05425 2997d340d403dc63e85d844a6c2a45a9 697 Gene3D G3DSA:4.10.1080.10 456 563 8.2E-11 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 Gene3D G3DSA:3.50.50.60 297 330 6.0E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 Gene3D G3DSA:3.50.50.60 3 181 6.0E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 Hamap MF_01971 Kynurenine 3-monooxygenase [kmo]. 4 438 27.582 T 20-04-2016 IPR027545 Kynurenine 3-monooxygenase GO:0004502|GO:0006569|GO:0019805 KEGG: 00380+1.14.13.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|UniPathway: UPA00253 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 314 330 5.2E-17 T 20-04-2016 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 5.2E-17 T 20-04-2016 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 5.2E-17 T 20-04-2016 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 314 5.2E-17 T 20-04-2016 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 PANTHER PTHR13789 2 439 7.6E-166 T 20-04-2016 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 Pfam PF01494 FAD binding domain 6 354 1.4E-21 T 20-04-2016 IPR002938 FAD-binding domain GO:0071949 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 PANTHER PTHR13789:SF205 2 439 7.6E-166 T 20-04-2016 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 SUPERFAMILY SSF51905 6 178 1.3E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS14275 7cb2476ada9c56e1778549a63420e9c0 470 SUPERFAMILY SSF51905 285 373 1.3E-46 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS02665 095596992986e6474424f7a7556b56bf 199 Pfam PF13302 Acetyltransferase (GNAT) domain 15 154 8.9E-17 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS02665 095596992986e6474424f7a7556b56bf 199 PANTHER PTHR13256:SF20 10 199 5.5E-44 T 20-04-2016 APS56_RS02665 095596992986e6474424f7a7556b56bf 199 Gene3D G3DSA:3.40.630.30 8 196 2.2E-43 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS02665 095596992986e6474424f7a7556b56bf 199 PANTHER PTHR13256 10 199 5.5E-44 T 20-04-2016 APS56_RS02665 095596992986e6474424f7a7556b56bf 199 SUPERFAMILY SSF55729 8 181 5.19E-33 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS12860 2035359e7ebf4cc3bb72f62ba756b284 159 Pfam PF15418 Domain of unknown function (DUF4625) 19 158 1.1E-41 T 20-04-2016 IPR027829 Protein of unknown function DUF4625 APS56_RS06915 203df73bfa2ac2856c528ecd5976a558 127 Pfam PF13564 DoxX-like family 13 110 6.9E-16 T 20-04-2016 IPR032808 DoxX family APS56_RS06915 203df73bfa2ac2856c528ecd5976a558 127 PIRSF PIRSF030066 1 126 5.3E-24 T 20-04-2016 IPR016944 Uncharacterised conserved protein UCP030066 APS56_RS04055 aecd7df0921561149f1aec64a1c94575 123 SUPERFAMILY SSF55174 1 83 1.88E-20 T 20-04-2016 APS56_RS04055 aecd7df0921561149f1aec64a1c94575 123 Pfam PF01479 S4 domain 1 47 2.1E-10 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS04055 aecd7df0921561149f1aec64a1c94575 123 Gene3D G3DSA:3.10.290.10 1 83 2.5E-25 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS04055 aecd7df0921561149f1aec64a1c94575 123 PIRSF PIRSF016821 1 123 6.9E-42 T 20-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 APS56_RS04055 aecd7df0921561149f1aec64a1c94575 123 SMART SM00363 1 64 7.8E-8 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS05095 9fc5e1a5cacea17cdbaa5e3d3813c9a1 552 Pfam PF05569 BlaR1 peptidase M56 130 255 2.5E-16 T 20-04-2016 IPR008756 Peptidase M56 APS56_RS05095 9fc5e1a5cacea17cdbaa5e3d3813c9a1 552 PANTHER PTHR33446 9 174 7.0E-12 T 20-04-2016 APS56_RS05095 9fc5e1a5cacea17cdbaa5e3d3813c9a1 552 PANTHER PTHR33446:SF2 9 174 7.0E-12 T 20-04-2016 APS56_RS00870 c862e0a892eb460555d62b5a3d9c0ea0 318 Gene3D G3DSA:3.40.50.1820 48 307 3.9E-26 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS00870 c862e0a892eb460555d62b5a3d9c0ea0 318 PIRSF PIRSF005211 1 318 7.8E-82 T 20-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- APS56_RS00870 c862e0a892eb460555d62b5a3d9c0ea0 318 PANTHER PTHR10794:SF55 1 318 2.4E-53 T 20-04-2016 APS56_RS00870 c862e0a892eb460555d62b5a3d9c0ea0 318 SUPERFAMILY SSF53474 26 299 2.07E-34 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS00870 c862e0a892eb460555d62b5a3d9c0ea0 318 PANTHER PTHR10794 1 318 2.4E-53 T 20-04-2016 APS56_RS00870 c862e0a892eb460555d62b5a3d9c0ea0 318 Pfam PF00561 alpha/beta hydrolase fold 61 300 4.2E-11 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS00870 c862e0a892eb460555d62b5a3d9c0ea0 318 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 225 266 - T 20-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 SUPERFAMILY SSF54631 466 586 4.17E-16 T 20-04-2016 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 Gene3D G3DSA:1.10.3080.10 21 458 7.2E-75 T 20-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 Pfam PF00571 CBS domain 469 519 9.6E-8 T 20-04-2016 IPR000644 CBS domain APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 Gene3D G3DSA:3.10.580.10 462 586 1.1E-15 T 20-04-2016 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 SUPERFAMILY SSF81340 8 452 3.27E-86 T 20-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 Pfam PF00654 Voltage gated chloride channel 75 432 7.6E-68 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PANTHER PTHR11689 309 590 5.2E-79 T 20-04-2016 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PANTHER PTHR11689 7 289 5.2E-79 T 20-04-2016 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PRINTS PR00762 Chloride channel signature 117 136 2.9E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PRINTS PR00762 Chloride channel signature 383 399 2.9E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PRINTS PR00762 Chloride channel signature 168 187 2.9E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PRINTS PR00762 Chloride channel signature 348 368 2.9E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PRINTS PR00762 Chloride channel signature 401 420 2.9E-18 T 20-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PANTHER PTHR11689:SF14 309 590 5.2E-79 T 20-04-2016 APS56_RS09250 fa869963945cc9acf26ad3063c48828d 595 PANTHER PTHR11689:SF14 7 289 5.2E-79 T 20-04-2016 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 Gene3D G3DSA:1.20.1250.20 215 404 2.2E-21 T 20-04-2016 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 Gene3D G3DSA:1.20.1250.20 6 195 2.3E-40 T 20-04-2016 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 Pfam PF07690 Major Facilitator Superfamily 12 357 1.2E-52 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 341 364 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 306 326 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 107 128 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 80 104 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 137 159 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 165 185 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 281 302 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 224 241 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 253 273 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PRINTS PR01035 Tetracycline resistance protein signature 18 34 2.6E-66 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 SUPERFAMILY SSF103473 5 404 3.01E-65 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PANTHER PTHR23504 1 406 4.8E-139 T 20-04-2016 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APS56_RS06935 d754b55c3b93ef8b33613c0ee749403d 408 PANTHER PTHR23504:SF18 1 406 4.8E-139 T 20-04-2016 APS56_RS04370 7e8af9869b1c10150652091ce75413bb 313 PANTHER PTHR32332 1 304 1.4E-123 T 20-04-2016 APS56_RS04370 7e8af9869b1c10150652091ce75413bb 313 SUPERFAMILY SSF51412 4 306 1.68E-66 T 20-04-2016 APS56_RS04370 7e8af9869b1c10150652091ce75413bb 313 Pfam PF03060 Nitronate monooxygenase 79 301 4.2E-41 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APS56_RS04370 7e8af9869b1c10150652091ce75413bb 313 Pfam PF03060 Nitronate monooxygenase 4 76 5.0E-17 T 20-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 APS56_RS04370 7e8af9869b1c10150652091ce75413bb 313 PANTHER PTHR32332:SF20 1 304 1.4E-123 T 20-04-2016 APS56_RS04370 7e8af9869b1c10150652091ce75413bb 313 Gene3D G3DSA:3.20.20.70 2 296 6.5E-70 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 337 365 1.99E-69 T 20-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 288 313 1.99E-69 T 20-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 518 540 1.99E-69 T 20-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 415 442 1.99E-69 T 20-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 190 1.99E-69 T 20-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 235 264 1.99E-69 T 20-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 SUPERFAMILY SSF48179 346 627 9.52E-89 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 Gene3D G3DSA:3.40.50.300 4 163 2.3E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 8 161 5.4E-54 T 20-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 419 431 - T 20-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 SUPERFAMILY SSF52540 6 161 1.1E-23 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 348 627 4.3E-90 T 20-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 Gene3D G3DSA:1.20.5.320 597 627 2.7E-17 T 20-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 169 628 4.5E-156 T 20-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 Pfam PF01202 Shikimate kinase 13 163 1.5E-15 T 20-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 SUPERFAMILY SSF51735 168 342 4.09E-44 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 SMART SM01350 348 628 2.7E-99 T 20-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 PANTHER PTHR11811 125 627 2.3E-190 T 20-04-2016 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 169 343 2.5E-45 T 20-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 PANTHER PTHR11811:SF25 125 627 2.3E-190 T 20-04-2016 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 Gene3D G3DSA:1.10.1040.10 350 592 2.9E-68 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APS56_RS15100 b034d82e60407d94774b703fbacc3c31 628 Gene3D G3DSA:3.40.50.720 164 349 5.7E-48 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS06750 7f456cd5085ebd8a701f2ca39c376152 1291 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1195 1283 3.8E-8 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS06750 7f456cd5085ebd8a701f2ca39c376152 1291 Gene3D G3DSA:3.40.50.10390 535 678 4.4E-16 T 20-04-2016 IPR029031 Gingipain, N-terminal APS56_RS06750 7f456cd5085ebd8a701f2ca39c376152 1291 SUPERFAMILY SSF52129 532 920 1.67E-67 T 20-04-2016 IPR029030 Caspase-like domain APS56_RS06750 7f456cd5085ebd8a701f2ca39c376152 1291 Gene3D G3DSA:3.40.50.1460 684 918 1.5E-53 T 20-04-2016 IPR029030 Caspase-like domain APS56_RS06750 7f456cd5085ebd8a701f2ca39c376152 1291 Pfam PF01364 Peptidase family C25 540 917 3.0E-80 T 20-04-2016 IPR001769 Gingipain GO:0006508|GO:0008234 APS56_RS05540 f322f05340b04d81effa7b3592b62db4 173 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 28 143 1.0E-4 T 20-04-2016 APS56_RS05540 f322f05340b04d81effa7b3592b62db4 173 Pfam PF00466 Ribosomal protein L10 1 99 5.1E-18 T 20-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APS56_RS05540 f322f05340b04d81effa7b3592b62db4 173 SUPERFAMILY SSF160369 1 171 2.09E-42 T 20-04-2016 APS56_RS05540 f322f05340b04d81effa7b3592b62db4 173 PANTHER PTHR11560 1 172 5.1E-37 T 20-04-2016 APS56_RS05540 f322f05340b04d81effa7b3592b62db4 173 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 161 19.152 T 20-04-2016 IPR022973 Ribosomal protein L10 APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 SUPERFAMILY SSF46689 285 333 2.9E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 PANTHER PTHR11019 229 334 1.1E-26 T 20-04-2016 APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 PANTHER PTHR11019:SF52 229 334 1.1E-26 T 20-04-2016 APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 Gene3D G3DSA:1.10.10.60 287 334 1.7E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 204 5.2E-21 T 20-04-2016 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 SMART SM00342 249 331 9.0E-24 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 315 331 1.17E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 315 1.17E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS06940 04baaf597962a323dfcec2997a4b2c7c 335 Pfam PF12833 Helix-turn-helix domain 256 333 7.0E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS07445 489e888dca9e48cf8b41728b67c5c7ff 374 PANTHER PTHR10277:SF9 3 374 1.8E-194 T 20-04-2016 APS56_RS07445 489e888dca9e48cf8b41728b67c5c7ff 374 Gene3D G3DSA:3.20.20.70 4 347 1.5E-141 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS07445 489e888dca9e48cf8b41728b67c5c7ff 374 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 20-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APS56_RS07445 489e888dca9e48cf8b41728b67c5c7ff 374 SUPERFAMILY SSF51569 6 291 1.54E-94 T 20-04-2016 APS56_RS07445 489e888dca9e48cf8b41728b67c5c7ff 374 Pfam PF00682 HMGL-like 6 273 1.3E-93 T 20-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APS56_RS07445 489e888dca9e48cf8b41728b67c5c7ff 374 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 200 213 - T 20-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APS56_RS07445 489e888dca9e48cf8b41728b67c5c7ff 374 PANTHER PTHR10277 3 374 1.8E-194 T 20-04-2016 APS56_RS07745 7a8745d410ec45942cae4f050aaf8ad5 187 PANTHER PTHR30055:SF44 1 181 9.2E-28 T 20-04-2016 APS56_RS07745 7a8745d410ec45942cae4f050aaf8ad5 187 SUPERFAMILY SSF46689 2 72 6.67E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07745 7a8745d410ec45942cae4f050aaf8ad5 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 7.1E-11 T 20-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APS56_RS07745 7a8745d410ec45942cae4f050aaf8ad5 187 Gene3D G3DSA:1.10.357.10 69 186 6.8E-7 T 20-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APS56_RS07745 7a8745d410ec45942cae4f050aaf8ad5 187 Gene3D G3DSA:1.10.10.60 1 62 1.1E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07745 7a8745d410ec45942cae4f050aaf8ad5 187 PANTHER PTHR30055 1 181 9.2E-28 T 20-04-2016 APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 PANTHER PTHR21327 1 384 4.5E-151 T 20-04-2016 APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 21 212 1.5E-84 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 14 217 37.925 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 Pfam PF00925 GTP cyclohydrolase II 223 384 4.2E-39 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 PANTHER PTHR21327:SF6 1 384 4.5E-151 T 20-04-2016 APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 Gene3D G3DSA:3.90.870.10 10 223 1.5E-98 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 SUPERFAMILY SSF142695 218 385 7.59E-47 T 20-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 SUPERFAMILY SSF55821 17 220 1.4E-85 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 17 213 1.5E-74 T 20-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS02455 0043a1c0e357efd31d7a8c57a92fe475 386 PIRSF PIRSF001259 15 386 1.3E-122 T 20-04-2016 APS56_RS09220 2f6e8e97b54f824ecc32fae933b2e715 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 75 385 1.1E-62 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APS56_RS09220 2f6e8e97b54f824ecc32fae933b2e715 389 PANTHER PTHR30469 28 389 9.8E-58 T 20-04-2016 APS56_RS09220 2f6e8e97b54f824ecc32fae933b2e715 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 94 299 6.3E-28 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APS56_RS09220 2f6e8e97b54f824ecc32fae933b2e715 389 SUPERFAMILY SSF111369 87 303 2.22E-28 T 20-04-2016 APS56_RS09220 2f6e8e97b54f824ecc32fae933b2e715 389 Gene3D G3DSA:2.40.50.100 193 222 1.8E-17 T 20-04-2016 APS56_RS09220 2f6e8e97b54f824ecc32fae933b2e715 389 Gene3D G3DSA:2.40.50.100 101 132 1.8E-17 T 20-04-2016 APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 Gene3D G3DSA:2.160.10.10 144 313 1.4E-45 T 20-04-2016 APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 Gene3D G3DSA:2.160.10.10 104 143 4.3E-10 T 20-04-2016 APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 PANTHER PTHR22572:SF117 60 301 1.7E-42 T 20-04-2016 APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 PANTHER PTHR22572 60 301 1.7E-42 T 20-04-2016 APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 92 1.0E-14 T 20-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 6 331 31.464 T 20-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 115 147 5.1E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 SUPERFAMILY SSF51161 34 322 2.84E-77 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 264 297 7.5E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 228 263 2.3E-6 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 150 183 3.4E-6 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS13855 b9a46dce96a25c4e59a73bd6f4a25a8f 331 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 9 330 1.4E-95 T 20-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APS56_RS11415 095a94c0f83032bf50cc31193932efc8 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.409 T 20-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APS56_RS11415 095a94c0f83032bf50cc31193932efc8 77 SUPERFAMILY SSF47336 2 76 7.98E-22 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APS56_RS11415 095a94c0f83032bf50cc31193932efc8 77 Pfam PF00550 Phosphopantetheine attachment site 7 73 1.0E-15 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APS56_RS11415 095a94c0f83032bf50cc31193932efc8 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 74 8.0E-9 T 20-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APS56_RS11415 095a94c0f83032bf50cc31193932efc8 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 2.4E-33 T 20-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APS56_RS11415 095a94c0f83032bf50cc31193932efc8 77 Gene3D G3DSA:1.10.1200.10 3 75 3.7E-31 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APS56_RS11415 095a94c0f83032bf50cc31193932efc8 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 20-04-2016 IPR006162 Phosphopantetheine attachment site APS56_RS11415 095a94c0f83032bf50cc31193932efc8 77 PANTHER PTHR20863 3 74 2.6E-26 T 20-04-2016 APS56_RS08540 45d3759356f4cb60d8972196b52d265a 193 Pfam PF00877 NlpC/P60 family 81 191 1.1E-25 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS08540 45d3759356f4cb60d8972196b52d265a 193 PANTHER PTHR21666 48 193 9.4E-32 T 20-04-2016 APS56_RS08540 45d3759356f4cb60d8972196b52d265a 193 SUPERFAMILY SSF54001 68 192 2.16E-34 T 20-04-2016 APS56_RS08540 45d3759356f4cb60d8972196b52d265a 193 Gene3D G3DSA:3.90.1720.10 64 193 2.1E-36 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS15370 3f65e172fd543fb4caa65b4566a150e3 412 SUPERFAMILY SSF53756 7 375 7.46E-19 T 20-04-2016 APS56_RS15370 3f65e172fd543fb4caa65b4566a150e3 412 Pfam PF13692 Glycosyl transferases group 1 201 338 9.2E-21 T 20-04-2016 APS56_RS12550 799bb9eaccf3fed61520f934d581aca4 354 PANTHER PTHR30344:SF1 20 354 9.4E-100 T 20-04-2016 APS56_RS12550 799bb9eaccf3fed61520f934d581aca4 354 SUPERFAMILY SSF51004 30 337 6.02E-39 T 20-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APS56_RS12550 799bb9eaccf3fed61520f934d581aca4 354 PANTHER PTHR30344 20 354 9.4E-100 T 20-04-2016 APS56_RS12550 799bb9eaccf3fed61520f934d581aca4 354 Gene3D G3DSA:2.130.10.10 25 354 1.6E-90 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS12550 799bb9eaccf3fed61520f934d581aca4 354 Pfam PF10282 Lactonase, 7-bladed beta-propeller 25 354 1.8E-102 T 20-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APS56_RS08675 483959c160d9882c7027399fd14bea35 222 Pfam PF12686 Protein of unknown function (DUF3800) 6 191 6.8E-23 T 20-04-2016 IPR024524 Protein of unknown function DUF3800 APS56_RS08675 483959c160d9882c7027399fd14bea35 222 ProDom PD040045 PLASMID ORF2 ORF2' 54 173 0.003 T 20-04-2016 APS56_RS13955 2eb25fd32b06851379d499f884b0e25e 96 Pfam PF00276 Ribosomal protein L23 3 91 2.1E-27 T 20-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APS56_RS13955 2eb25fd32b06851379d499f884b0e25e 96 PANTHER PTHR11620 76 87 3.2E-16 T 20-04-2016 APS56_RS13955 2eb25fd32b06851379d499f884b0e25e 96 PANTHER PTHR11620 1 59 3.2E-16 T 20-04-2016 APS56_RS13955 2eb25fd32b06851379d499f884b0e25e 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 1 95 18.093 T 20-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APS56_RS13955 2eb25fd32b06851379d499f884b0e25e 96 SUPERFAMILY SSF54189 1 95 6.12E-25 T 20-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13955 2eb25fd32b06851379d499f884b0e25e 96 Gene3D G3DSA:3.30.70.330 1 95 9.0E-28 T 20-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 98 440 7.5E-102 T 20-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 PANTHER PTHR11731 21 724 3.4E-224 T 20-04-2016 APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 Pfam PF00326 Prolyl oligopeptidase family 530 723 1.7E-58 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 Gene3D G3DSA:3.40.50.1820 474 723 1.5E-87 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 SUPERFAMILY SSF53474 474 724 4.89E-77 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 569 599 - T 20-04-2016 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 PANTHER PTHR11731:SF110 21 724 3.4E-224 T 20-04-2016 APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 SUPERFAMILY SSF82171 45 470 1.7E-65 T 20-04-2016 APS56_RS08565 ab7b46af7847d8fceb77b85ec9486a0f 724 Gene3D G3DSA:2.140.10.30 25 469 1.2E-121 T 20-04-2016 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 APS56_RS09565 5531d4a294c89a4f59ebecda1652b8a2 257 Gene3D G3DSA:1.10.8.100 194 251 9.3E-21 T 20-04-2016 IPR023165 rRNA adenine dimethylase-like APS56_RS09565 5531d4a294c89a4f59ebecda1652b8a2 257 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 3 254 48.955 T 20-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APS56_RS09565 5531d4a294c89a4f59ebecda1652b8a2 257 SUPERFAMILY SSF53335 3 250 1.27E-68 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS09565 5531d4a294c89a4f59ebecda1652b8a2 257 Gene3D G3DSA:3.40.50.150 3 189 1.3E-62 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS09565 5531d4a294c89a4f59ebecda1652b8a2 257 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 3 250 4.9E-79 T 20-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APS56_RS09565 5531d4a294c89a4f59ebecda1652b8a2 257 PANTHER PTHR11727 3 249 8.5E-76 T 20-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APS56_RS09565 5531d4a294c89a4f59ebecda1652b8a2 257 Pfam PF00398 Ribosomal RNA adenine dimethylase 4 223 1.1E-50 T 20-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APS56_RS09565 5531d4a294c89a4f59ebecda1652b8a2 257 SMART SM00650 19 189 4.4E-52 T 20-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 PANTHER PTHR26402:SF50 6 226 8.3E-83 T 20-04-2016 APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 Gene3D G3DSA:3.40.50.2300 2 129 1.7E-43 T 20-04-2016 APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 SMART SM00862 153 224 4.7E-23 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 SMART SM00448 6 119 1.9E-43 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 SUPERFAMILY SSF46894 132 225 5.95E-26 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 224 1.3E-21 T 20-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 SUPERFAMILY SSF52172 3 127 9.25E-42 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 Pfam PF00072 Response regulator receiver domain 8 119 1.6E-29 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 Gene3D G3DSA:1.10.10.10 131 225 1.4E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12405 3aa940a2da62cf79474c99a53759a8d7 226 PANTHER PTHR26402 6 226 8.3E-83 T 20-04-2016 APS56_RS01080 5b4b2d8bd1fec9a64955144455a6c096 86 Pfam PF09413 Putative prokaryotic signal transducing protein 8 73 5.8E-10 T 20-04-2016 IPR018551 Domain of unknown function DUF2007 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 PANTHER PTHR20854 1 261 2.3E-66 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 SUPERFAMILY SSF56655 1 261 4.32E-60 T 20-04-2016 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 Gene3D G3DSA:3.30.540.10 2 131 1.4E-36 T 20-04-2016 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 Pfam PF00459 Inositol monophosphatase family 2 254 9.6E-45 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 Gene3D G3DSA:3.40.190.80 161 261 2.3E-40 T 20-04-2016 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 20-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 PANTHER PTHR20854:SF5 1 261 2.3E-66 T 20-04-2016 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 219 243 1.2E-5 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 1.2E-5 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.2E-5 T 20-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APS56_RS05400 a37edbd2ab4750a96389a9e01511f4fe 262 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 8 261 3.3E-77 T 20-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 APS56_RS00665 efbc96d9033ece0876051305731595ab 529 SUPERFAMILY SSF116726 185 258 1.31E-11 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS00665 efbc96d9033ece0876051305731595ab 529 PANTHER PTHR30445:SF1 1 529 2.5E-182 T 20-04-2016 APS56_RS00665 efbc96d9033ece0876051305731595ab 529 Gene3D G3DSA:3.30.70.1450 196 260 2.7E-11 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS00665 efbc96d9033ece0876051305731595ab 529 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 361 513 5.0E-32 T 20-04-2016 IPR006512 YidE/YbjL duplication APS56_RS00665 efbc96d9033ece0876051305731595ab 529 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 150 8.8E-25 T 20-04-2016 IPR006512 YidE/YbjL duplication APS56_RS00665 efbc96d9033ece0876051305731595ab 529 Pfam PF06826 Predicted Permease Membrane Region 10 163 3.8E-40 T 20-04-2016 IPR006512 YidE/YbjL duplication APS56_RS00665 efbc96d9033ece0876051305731595ab 529 Pfam PF06826 Predicted Permease Membrane Region 357 525 5.2E-41 T 20-04-2016 IPR006512 YidE/YbjL duplication APS56_RS00665 efbc96d9033ece0876051305731595ab 529 SUPERFAMILY SSF116726 269 343 5.62E-11 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS00665 efbc96d9033ece0876051305731595ab 529 PANTHER PTHR30445 1 529 2.5E-182 T 20-04-2016 APS56_RS00665 efbc96d9033ece0876051305731595ab 529 Gene3D G3DSA:3.30.70.1450 281 343 8.2E-10 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS00665 efbc96d9033ece0876051305731595ab 529 Pfam PF02080 TrkA-C domain 196 258 9.2E-11 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS00665 efbc96d9033ece0876051305731595ab 529 Pfam PF02080 TrkA-C domain 281 343 1.3E-10 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 27 225 1.6E-22 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 22 321 1.2E-109 T 20-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 PANTHER PTHR32108 5 325 3.6E-109 T 20-04-2016 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 SUPERFAMILY SSF47789 255 327 6.67E-21 T 20-04-2016 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 Gene3D G3DSA:2.170.120.12 51 174 1.3E-40 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 263 322 9.0E-19 T 20-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 SMART SM00662 21 231 2.7E-70 T 20-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 Gene3D G3DSA:1.10.150.20 249 328 4.3E-27 T 20-04-2016 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 PANTHER PTHR32108:SF0 5 325 3.6E-109 T 20-04-2016 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 3 321 33.773 T 20-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 SUPERFAMILY SSF55257 6 51 1.96E-29 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 SUPERFAMILY SSF55257 176 230 1.96E-29 T 20-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.1E-19 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 SUPERFAMILY SSF56553 51 175 1.96E-37 T 20-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APS56_RS14070 e9d713ec48b40c7ae0e840c4f7ed0871 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 249 310 1.4E-21 T 20-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS13845 402f778437046e704707ac8378a2ee83 242 Gene3D G3DSA:3.30.1150.10 150 241 9.6E-7 T 20-04-2016 APS56_RS13845 402f778437046e704707ac8378a2ee83 242 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 168 241 3.8E-7 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 APS56_RS13845 402f778437046e704707ac8378a2ee83 242 PANTHER PTHR33446:SF2 38 242 9.1E-12 T 20-04-2016 APS56_RS13845 402f778437046e704707ac8378a2ee83 242 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 165 240 2.6E-14 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 APS56_RS13845 402f778437046e704707ac8378a2ee83 242 SUPERFAMILY SSF74653 161 239 1.7E-14 T 20-04-2016 APS56_RS13845 402f778437046e704707ac8378a2ee83 242 PANTHER PTHR33446 38 242 9.1E-12 T 20-04-2016 APS56_RS13805 d932cd786345a9d1d32917f38b4c38b0 235 PANTHER PTHR20842 1 228 2.7E-88 T 20-04-2016 APS56_RS13805 d932cd786345a9d1d32917f38b4c38b0 235 SUPERFAMILY SSF52317 3 220 3.15E-36 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS13805 d932cd786345a9d1d32917f38b4c38b0 235 PANTHER PTHR20842:SF2 1 228 2.7E-88 T 20-04-2016 APS56_RS13805 d932cd786345a9d1d32917f38b4c38b0 235 Gene3D G3DSA:3.40.50.880 3 229 4.5E-68 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS13805 d932cd786345a9d1d32917f38b4c38b0 235 Pfam PF03575 Peptidase family S51 4 207 1.2E-52 T 20-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 706 975 3.8E-68 T 20-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 SUPERFAMILY SSF82866 809 983 5.23E-33 T 20-04-2016 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 667 36.248 T 20-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 SUPERFAMILY SSF82866 461 656 9.94E-46 T 20-04-2016 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 Pfam PF07549 SecD/SecF GG Motif 88 104 0.01 T 20-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 Pfam PF07549 SecD/SecF GG Motif 700 725 1.9E-7 T 20-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 Gene3D G3DSA:1.20.1640.10 460 653 9.8E-30 T 20-04-2016 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 Gene3D G3DSA:1.20.1640.10 811 992 3.3E-30 T 20-04-2016 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 412 644 4.9E-72 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 802 972 1.4E-46 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 90 651 9.5E-117 T 20-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 PRINTS PR01755 Bacterial translocase SecF protein signature 923 938 1.5E-17 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 PRINTS PR01755 Bacterial translocase SecF protein signature 704 719 1.5E-17 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 PRINTS PR01755 Bacterial translocase SecF protein signature 891 909 1.5E-17 T 20-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 677 986 25.401 T 20-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 Pfam PF02355 Protein export membrane protein 483 656 4.9E-26 T 20-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APS56_RS13840 4910f0f7871f633d63e29d0e244c9c18 993 Pfam PF02355 Protein export membrane protein 802 982 2.8E-60 T 20-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 Pfam PF04545 Sigma-70, region 4 222 275 1.6E-17 T 20-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 PRINTS PR00046 Major sigma-70 factor signature 226 238 5.4E-23 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 PRINTS PR00046 Major sigma-70 factor signature 262 273 5.4E-23 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 PRINTS PR00046 Major sigma-70 factor signature 78 91 5.4E-23 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 PRINTS PR00046 Major sigma-70 factor signature 102 110 5.4E-23 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 PRINTS PR00046 Major sigma-70 factor signature 247 262 5.4E-23 T 20-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 Pfam PF00140 Sigma-70 factor, region 1.2 17 48 1.7E-14 T 20-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 SUPERFAMILY SSF88946 14 123 3.92E-40 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 Gene3D G3DSA:1.10.10.10 218 286 1.0E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 PANTHER PTHR30603 21 286 3.3E-99 T 20-04-2016 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 275 5.1E-36 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 SUPERFAMILY SSF88659 127 200 5.23E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 PANTHER PTHR30603:SF0 21 286 3.3E-99 T 20-04-2016 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 Gene3D G3DSA:1.10.601.10 12 123 2.6E-47 T 20-04-2016 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 Pfam PF04542 Sigma-70 region 2 56 123 6.3E-16 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 PIRSF PIRSF000770 9 284 2.0E-37 T 20-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 Pfam PF04539 Sigma-70 region 3 135 207 1.4E-15 T 20-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 Gene3D G3DSA:1.10.10.10 127 176 1.8E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13195 9a2a9df3a6649c79407b702c0f0eab77 287 SUPERFAMILY SSF88659 185 286 1.59E-23 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 PANTHER PTHR21403:SF0 4 284 2.5E-103 T 20-04-2016 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 Gene3D G3DSA:3.30.70.120 214 284 4.6E-30 T 20-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 SUPERFAMILY SSF53850 3 209 6.14E-63 T 20-04-2016 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 3 285 32.414 T 20-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 SUPERFAMILY SSF54913 213 284 2.78E-23 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 144 165 - T 20-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 4 184 2.2E-56 T 20-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 190 284 4.4E-30 T 20-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 Pfam PF08029 HisG, C-terminal domain 211 282 8.5E-28 T 20-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 PANTHER PTHR21403 4 284 2.5E-103 T 20-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 Gene3D G3DSA:3.40.190.10 3 143 8.9E-39 T 20-04-2016 APS56_RS01950 663fb2242f9af39c3477c2a60d1ff39a 285 Pfam PF01634 ATP phosphoribosyltransferase 51 205 1.1E-47 T 20-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APS56_RS14025 d7bb016e9a03366819075b80c181169f 118 Gene3D G3DSA:3.30.420.100 22 118 1.1E-38 T 20-04-2016 APS56_RS14025 d7bb016e9a03366819075b80c181169f 118 PANTHER PTHR12899 2 118 1.0E-36 T 20-04-2016 APS56_RS14025 d7bb016e9a03366819075b80c181169f 118 SUPERFAMILY SSF53137 5 116 1.42E-46 T 20-04-2016 APS56_RS14025 d7bb016e9a03366819075b80c181169f 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 4 118 27.097 T 20-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14025 d7bb016e9a03366819075b80c181169f 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 4 118 4.9E-43 T 20-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14025 d7bb016e9a03366819075b80c181169f 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 5 118 8.1E-39 T 20-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15690 d9ac13111719e078381f5973cded643b 505 Gene3D G3DSA:3.20.20.80 214 501 3.3E-44 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS15690 d9ac13111719e078381f5973cded643b 505 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 235 462 9.0E-13 T 20-04-2016 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 APS56_RS15690 d9ac13111719e078381f5973cded643b 505 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 328 337 - T 20-04-2016 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 APS56_RS15690 d9ac13111719e078381f5973cded643b 505 SUPERFAMILY SSF51445 216 466 1.31E-55 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS01850 49de4c0dd949195b91719f8ba2caa69b 279 Pfam PF04556 DpnII restriction endonuclease 4 268 6.9E-93 T 20-04-2016 IPR007637 Restriction endonuclease, type II, DpmII-like GO:0003677|GO:0009036|GO:0009307 APS56_RS01850 49de4c0dd949195b91719f8ba2caa69b 279 SUPERFAMILY SSF52980 52 223 5.36E-9 T 20-04-2016 IPR011335 Restriction endonuclease type II-like APS56_RS01850 49de4c0dd949195b91719f8ba2caa69b 279 PIRSF PIRSF016080 1 274 5.3E-94 T 20-04-2016 IPR021191 Restriction endonuclease, type II, DpmII GO:0003677|GO:0009036|GO:0009307 APS56_RS10505 293a8c0d145c74b6e1287452b2dfe5ad 362 PANTHER PTHR22777:SF4 1 354 3.1E-115 T 20-04-2016 APS56_RS10505 293a8c0d145c74b6e1287452b2dfe5ad 362 SMART SM00116 275 323 1.8E-4 T 20-04-2016 IPR000644 CBS domain APS56_RS10505 293a8c0d145c74b6e1287452b2dfe5ad 362 SUPERFAMILY SSF54631 191 324 1.77E-25 T 20-04-2016 APS56_RS10505 293a8c0d145c74b6e1287452b2dfe5ad 362 PANTHER PTHR22777 1 354 3.1E-115 T 20-04-2016 APS56_RS10505 293a8c0d145c74b6e1287452b2dfe5ad 362 Gene3D G3DSA:3.10.580.10 189 324 6.9E-16 T 20-04-2016 APS56_RS10505 293a8c0d145c74b6e1287452b2dfe5ad 362 Pfam PF01595 Domain of unknown function DUF21 9 188 2.9E-26 T 20-04-2016 IPR002550 Domain of unknown function DUF21 APS56_RS10505 293a8c0d145c74b6e1287452b2dfe5ad 362 Pfam PF00571 CBS domain 203 260 0.0026 T 20-04-2016 IPR000644 CBS domain APS56_RS10505 293a8c0d145c74b6e1287452b2dfe5ad 362 Pfam PF00571 CBS domain 273 323 1.1E-6 T 20-04-2016 IPR000644 CBS domain APS56_RS08240 f42fd3becb3d29daa6b56e047beb03e5 152 Pfam PF13185 GAF domain 19 149 7.2E-13 T 20-04-2016 IPR003018 GAF domain GO:0005515 APS56_RS08240 f42fd3becb3d29daa6b56e047beb03e5 152 PANTHER PTHR21021:SF15 3 152 2.2E-40 T 20-04-2016 APS56_RS08240 f42fd3becb3d29daa6b56e047beb03e5 152 PANTHER PTHR21021 3 152 2.2E-40 T 20-04-2016 APS56_RS08240 f42fd3becb3d29daa6b56e047beb03e5 152 Gene3D G3DSA:3.30.450.40 16 151 4.1E-37 T 20-04-2016 IPR029016 GAF domain-like APS56_RS08240 f42fd3becb3d29daa6b56e047beb03e5 152 SUPERFAMILY SSF55781 6 150 1.2E-36 T 20-04-2016 IPR029016 GAF domain-like APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 Gene3D G3DSA:2.40.30.10 186 277 2.1E-17 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 SUPERFAMILY SSF160996 185 347 7.72E-34 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 Gene3D G3DSA:3.50.50.60 1 185 1.4E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 Gene3D G3DSA:3.50.50.60 346 402 1.4E-37 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 SUPERFAMILY SSF51905 1 193 2.11E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 SUPERFAMILY SSF51905 344 402 2.11E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PANTHER PTHR10617 337 403 5.0E-121 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PANTHER PTHR10617 1 296 5.0E-121 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 170 2.1E-10 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 369 376 2.1E-10 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.1E-10 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 Pfam PF03486 HI0933-like protein 5 399 2.9E-112 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PANTHER PTHR10617:SF103 337 403 5.0E-121 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PANTHER PTHR10617:SF103 1 296 5.0E-121 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 399 3.3E-124 T 20-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.2E-8 T 20-04-2016 APS56_RS09055 9a5dbac4d96a99994f9b9295f6182aa9 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.2E-8 T 20-04-2016 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 11 669 9.7E-150 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 PANTHER PTHR11649 1 166 4.5E-203 T 20-04-2016 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 PANTHER PTHR11649 567 699 4.5E-203 T 20-04-2016 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 PANTHER PTHR11649 259 538 4.5E-203 T 20-04-2016 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 Gene3D G3DSA:3.40.50.300 3 169 1.5E-28 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 SUPERFAMILY SSF52540 5 168 2.83E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 6.5E-7 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 6.5E-7 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 Pfam PF02421 Ferrous iron transport protein B 5 164 4.6E-51 T 20-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 Pfam PF07670 Nucleoside recognition 345 434 7.0E-15 T 20-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 Pfam PF07670 Nucleoside recognition 512 673 9.3E-25 T 20-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 Pfam PF07664 Ferrous iron transport protein B C terminus 454 506 1.2E-13 T 20-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 PANTHER PTHR11649:SF37 1 166 4.5E-203 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 PANTHER PTHR11649:SF37 567 699 4.5E-203 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APS56_RS10190 4ec8c47347c12e7b0e571107afd08eec 699 PANTHER PTHR11649:SF37 259 538 4.5E-203 T 20-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PRINTS PR00738 Glycosyl hydrolase family 20 signature 175 196 7.4E-49 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PRINTS PR00738 Glycosyl hydrolase family 20 signature 470 486 7.4E-49 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PRINTS PR00738 Glycosyl hydrolase family 20 signature 249 266 7.4E-49 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PRINTS PR00738 Glycosyl hydrolase family 20 signature 302 320 7.4E-49 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PRINTS PR00738 Glycosyl hydrolase family 20 signature 488 505 7.4E-49 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PRINTS PR00738 Glycosyl hydrolase family 20 signature 146 163 7.4E-49 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PRINTS PR00738 Glycosyl hydrolase family 20 signature 324 337 7.4E-49 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PRINTS PR00738 Glycosyl hydrolase family 20 signature 110 130 7.4E-49 T 20-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 25 148 1.6E-20 T 20-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 SUPERFAMILY SSF55545 25 151 1.94E-22 T 20-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APS56_RS02965 74a76b914c3200213ace70232fab361f 616 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 553 604 1.3E-8 T 20-04-2016 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PANTHER PTHR22600:SF21 1 212 8.9E-200 T 20-04-2016 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PANTHER PTHR22600:SF21 232 588 8.9E-200 T 20-04-2016 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 152 506 2.0E-111 T 20-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 SUPERFAMILY SSF51445 152 519 3.37E-121 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PANTHER PTHR22600 1 212 8.9E-200 T 20-04-2016 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 PANTHER PTHR22600 232 588 8.9E-200 T 20-04-2016 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 Gene3D G3DSA:3.20.20.80 150 572 5.5E-133 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS02965 74a76b914c3200213ace70232fab361f 616 Gene3D G3DSA:3.30.379.10 2 148 5.0E-26 T 20-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00690 Adhesin family signature 57 70 6.2E-43 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00690 Adhesin family signature 266 285 6.2E-43 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00690 Adhesin family signature 182 203 6.2E-43 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00690 Adhesin family signature 235 253 6.2E-43 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00690 Adhesin family signature 70 87 6.2E-43 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00690 Adhesin family signature 26 44 6.2E-43 T 20-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00691 Adhesin B signature 51 69 1.8E-25 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00691 Adhesin B signature 279 297 1.8E-25 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00691 Adhesin B signature 258 276 1.8E-25 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00691 Adhesin B signature 70 89 1.8E-25 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00691 Adhesin B signature 182 199 1.8E-25 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PRINTS PR00691 Adhesin B signature 26 47 1.8E-25 T 20-04-2016 IPR006129 Adhesin B GO:0007155 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PANTHER PTHR30477:SF16 5 300 6.3E-104 T 20-04-2016 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 Gene3D G3DSA:3.40.50.1980 175 301 6.7E-45 T 20-04-2016 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 Gene3D G3DSA:3.40.50.1980 23 174 4.7E-40 T 20-04-2016 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 SUPERFAMILY SSF53807 24 301 2.01E-76 T 20-04-2016 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 299 8.4E-70 T 20-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APS56_RS10210 a29c99c09fe32dc97a21516d6f60bf05 301 PANTHER PTHR30477 5 300 6.3E-104 T 20-04-2016 APS56_RS08400 541d51161c8a3d1f7b6eedf49ff3328e 783 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 706 24.675 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 APS56_RS08400 541d51161c8a3d1f7b6eedf49ff3328e 783 PIRSF PIRSF001265 1 714 4.5E-270 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 APS56_RS08400 541d51161c8a3d1f7b6eedf49ff3328e 783 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 9 707 2.1E-286 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 APS56_RS08400 541d51161c8a3d1f7b6eedf49ff3328e 783 Pfam PF03030 Inorganic H+ pyrophosphatase 13 701 4.0E-266 T 20-04-2016 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0015992|GO:0016020 KEGG: 00190+3.6.1.1 APS56_RS08400 541d51161c8a3d1f7b6eedf49ff3328e 783 PANTHER PTHR31998:SF0 1 716 0.0 T 20-04-2016 APS56_RS08400 541d51161c8a3d1f7b6eedf49ff3328e 783 PANTHER PTHR31998 1 716 0.0 T 20-04-2016 APS56_RS08505 deb01e1982fbabee782cb570b4d438ca 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 195 209 4.5E-10 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS08505 deb01e1982fbabee782cb570b4d438ca 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 4.5E-10 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS08505 deb01e1982fbabee782cb570b4d438ca 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 4.5E-10 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS08505 deb01e1982fbabee782cb570b4d438ca 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 4.5E-10 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS08505 deb01e1982fbabee782cb570b4d438ca 254 Pfam PF12146 Serine aminopeptidase, S33 22 236 2.3E-13 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APS56_RS08505 deb01e1982fbabee782cb570b4d438ca 254 Gene3D G3DSA:3.40.50.1820 8 251 1.1E-50 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS08505 deb01e1982fbabee782cb570b4d438ca 254 PANTHER PTHR10992 13 251 2.9E-48 T 20-04-2016 APS56_RS08505 deb01e1982fbabee782cb570b4d438ca 254 SUPERFAMILY SSF53474 10 251 4.42E-51 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS05840 68b08882c2de0da371dfbe47a8ac7eb8 96 Gene3D G3DSA:1.10.238.10 32 86 2.2E-8 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS05840 68b08882c2de0da371dfbe47a8ac7eb8 96 Pfam PF13202 EF hand 42 59 8.2E-4 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS05840 68b08882c2de0da371dfbe47a8ac7eb8 96 Pfam PF13202 EF hand 66 85 1.7E-5 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS05840 68b08882c2de0da371dfbe47a8ac7eb8 96 ProSitePatterns PS00018 EF-hand calcium-binding domain. 47 59 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS05840 68b08882c2de0da371dfbe47a8ac7eb8 96 ProSitePatterns PS00018 EF-hand calcium-binding domain. 71 83 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS05840 68b08882c2de0da371dfbe47a8ac7eb8 96 SUPERFAMILY SSF47473 32 87 2.35E-10 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS03645 48e3c39978d5e2ce292ccb4c7606da34 434 PANTHER PTHR11921:SF22 107 433 7.1E-47 T 20-04-2016 APS56_RS03645 48e3c39978d5e2ce292ccb4c7606da34 434 Pfam PF13183 4Fe-4S dicluster domain 300 382 5.3E-12 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS03645 48e3c39978d5e2ce292ccb4c7606da34 434 SUPERFAMILY SSF46548 285 397 6.28E-23 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APS56_RS03645 48e3c39978d5e2ce292ccb4c7606da34 434 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 302 313 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS03645 48e3c39978d5e2ce292ccb4c7606da34 434 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 368 379 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS03645 48e3c39978d5e2ce292ccb4c7606da34 434 SUPERFAMILY SSF103501 3 248 1.44E-11 T 20-04-2016 IPR023234 NarG-like domain APS56_RS03645 48e3c39978d5e2ce292ccb4c7606da34 434 Gene3D G3DSA:1.10.1060.10 275 400 5.5E-31 T 20-04-2016 APS56_RS03645 48e3c39978d5e2ce292ccb4c7606da34 434 PANTHER PTHR11921 107 433 7.1E-47 T 20-04-2016 APS56_RS11810 04e78b497eca045112621bf16d65725f 109 SUPERFAMILY SSF89360 1 97 2.35E-26 T 20-04-2016 IPR000361 FeS cluster biogenesis APS56_RS11810 04e78b497eca045112621bf16d65725f 109 PANTHER PTHR10072 1 108 1.6E-39 T 20-04-2016 APS56_RS11810 04e78b497eca045112621bf16d65725f 109 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 90 107 - T 20-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APS56_RS11810 04e78b497eca045112621bf16d65725f 109 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 105 7.4E-20 T 20-04-2016 IPR000361 FeS cluster biogenesis APS56_RS11810 04e78b497eca045112621bf16d65725f 109 Gene3D G3DSA:2.60.300.12 1 98 3.7E-30 T 20-04-2016 IPR000361 FeS cluster biogenesis APS56_RS11810 04e78b497eca045112621bf16d65725f 109 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 108 2.3E-34 T 20-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APS56_RS13010 437a95226e5e7f2f2a974cce69b9579a 384 ProSitePatterns PS00018 EF-hand calcium-binding domain. 367 379 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS13010 437a95226e5e7f2f2a974cce69b9579a 384 SUPERFAMILY SSF56925 45 187 3.66E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS13010 437a95226e5e7f2f2a974cce69b9579a 384 Gene3D G3DSA:1.10.238.10 324 380 2.3E-4 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS13010 437a95226e5e7f2f2a974cce69b9579a 384 SUPERFAMILY SSF47473 335 381 6.37E-6 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS00180 936614ce81c939d938b1de63f90973b6 304 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 7 302 19.714 T 20-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APS56_RS00180 936614ce81c939d938b1de63f90973b6 304 PANTHER PTHR13929 3 304 3.7E-57 T 20-04-2016 APS56_RS00180 936614ce81c939d938b1de63f90973b6 304 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 16 299 7.2E-77 T 20-04-2016 APS56_RS00180 936614ce81c939d938b1de63f90973b6 304 PANTHER PTHR13929:SF0 3 304 3.7E-57 T 20-04-2016 APS56_RS00180 936614ce81c939d938b1de63f90973b6 304 PIRSF PIRSF005355 1 304 6.9E-75 T 20-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 APS56_RS00180 936614ce81c939d938b1de63f90973b6 304 Pfam PF01040 UbiA prenyltransferase family 28 287 2.8E-36 T 20-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 264 8.5E-70 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 SUPERFAMILY SSF48179 160 266 1.26E-30 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 97 5.3E-16 T 20-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 264 23.075 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 PANTHER PTHR11645 1 267 5.5E-84 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 PANTHER PTHR11645:SF0 1 267 5.5E-84 T 20-04-2016 APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 Gene3D G3DSA:3.40.50.720 1 156 1.9E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 SUPERFAMILY SSF51735 1 156 6.2E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 160 264 3.0E-29 T 20-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 Gene3D G3DSA:1.10.3730.10 160 264 1.4E-29 T 20-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APS56_RS05120 9b4c8bc2944ac096dafc7e7dc4058d63 267 PIRSF PIRSF000193 1 267 4.5E-68 T 20-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 SUPERFAMILY SSF103473 14 433 3.4E-38 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 PANTHER PTHR23514 1 175 5.1E-145 T 20-04-2016 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 PANTHER PTHR23514 414 437 5.1E-145 T 20-04-2016 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 PANTHER PTHR23514 193 396 5.1E-145 T 20-04-2016 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 PANTHER PTHR23514:SF10 1 175 5.1E-145 T 20-04-2016 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 PANTHER PTHR23514:SF10 414 437 5.1E-145 T 20-04-2016 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 PANTHER PTHR23514:SF10 193 396 5.1E-145 T 20-04-2016 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 97 398 5.0E-79 T 20-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 Gene3D G3DSA:1.20.1250.20 240 432 3.7E-5 T 20-04-2016 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 Gene3D G3DSA:1.20.1250.20 18 227 4.4E-20 T 20-04-2016 APS56_RS13685 a39db28dc8cf507ded1e47374d921e25 443 Pfam PF07690 Major Facilitator Superfamily 22 382 6.8E-22 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 Gene3D G3DSA:1.10.287.130 145 196 8.1E-9 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 SMART SM00388 148 214 2.9E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 SUPERFAMILY SSF55874 210 362 6.68E-40 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 PANTHER PTHR24423 128 364 1.1E-55 T 20-04-2016 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 321 1.8E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 307 1.8E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 342 1.8E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 1.8E-17 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 Pfam PF00512 His Kinase A (phospho-acceptor) domain 149 196 1.2E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 SMART SM00387 256 364 6.9E-32 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 362 2.0E-20 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 SUPERFAMILY SSF47384 141 209 1.45E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS06280 d1a4a7276c34bdc2364a7919927cfd63 364 Gene3D G3DSA:3.30.565.10 216 362 9.1E-41 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14285 166f8861dbc24f1f95f14b40b516d794 181 SUPERFAMILY SSF50324 14 174 2.09E-62 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APS56_RS14285 166f8861dbc24f1f95f14b40b516d794 181 Gene3D G3DSA:3.90.80.10 9 170 7.6E-57 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APS56_RS14285 166f8861dbc24f1f95f14b40b516d794 181 PANTHER PTHR10286:SF0 11 170 1.2E-60 T 20-04-2016 APS56_RS14285 166f8861dbc24f1f95f14b40b516d794 181 PANTHER PTHR10286 11 170 1.2E-60 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APS56_RS14285 166f8861dbc24f1f95f14b40b516d794 181 Pfam PF00719 Inorganic pyrophosphatase 17 168 2.2E-54 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APS56_RS14285 166f8861dbc24f1f95f14b40b516d794 181 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 13 169 32.714 T 20-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APS56_RS16590 33632cc5ad7daa7469a141eb4efdd013 651 SUPERFAMILY SSF54534 122 224 3.99E-16 T 20-04-2016 APS56_RS16590 33632cc5ad7daa7469a141eb4efdd013 651 PANTHER PTHR10657:SF11 228 370 6.9E-32 T 20-04-2016 APS56_RS16590 33632cc5ad7daa7469a141eb4efdd013 651 Pfam PF13616 PPIC-type PPIASE domain 218 329 5.6E-26 T 20-04-2016 APS56_RS16590 33632cc5ad7daa7469a141eb4efdd013 651 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 265 286 - T 20-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APS56_RS16590 33632cc5ad7daa7469a141eb4efdd013 651 Gene3D G3DSA:3.10.50.40 118 225 2.4E-22 T 20-04-2016 APS56_RS16590 33632cc5ad7daa7469a141eb4efdd013 651 Gene3D G3DSA:3.10.50.40 227 349 3.4E-33 T 20-04-2016 APS56_RS16590 33632cc5ad7daa7469a141eb4efdd013 651 SUPERFAMILY SSF54534 227 331 2.09E-24 T 20-04-2016 APS56_RS16590 33632cc5ad7daa7469a141eb4efdd013 651 PANTHER PTHR10657 228 370 6.9E-32 T 20-04-2016 APS56_RS12150 e516c77657ad1588a6997847a7a0c39f 439 PANTHER PTHR21666:SF207 183 439 3.8E-50 T 20-04-2016 APS56_RS12150 e516c77657ad1588a6997847a7a0c39f 439 SUPERFAMILY SSF51261 133 387 7.32E-58 T 20-04-2016 IPR011055 Duplicated hybrid motif APS56_RS12150 e516c77657ad1588a6997847a7a0c39f 439 PANTHER PTHR21666 183 439 3.8E-50 T 20-04-2016 APS56_RS12150 e516c77657ad1588a6997847a7a0c39f 439 Pfam PF01551 Peptidase family M23 292 386 3.1E-30 T 20-04-2016 IPR016047 Peptidase M23 APS56_RS12150 e516c77657ad1588a6997847a7a0c39f 439 Gene3D G3DSA:2.70.70.10 243 387 6.7E-42 T 20-04-2016 APS56_RS06145 c2707e74d424c2e3ccc8325ffcd183c0 557 Gene3D G3DSA:1.25.40.10 475 491 3.9E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06145 c2707e74d424c2e3ccc8325ffcd183c0 557 Gene3D G3DSA:1.25.40.10 227 419 3.9E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06145 c2707e74d424c2e3ccc8325ffcd183c0 557 SUPERFAMILY SSF48452 29 419 6.45E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06145 c2707e74d424c2e3ccc8325ffcd183c0 557 SUPERFAMILY SSF48452 475 506 6.45E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06145 c2707e74d424c2e3ccc8325ffcd183c0 557 Pfam PF07980 SusD family 371 509 1.1E-12 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 PANTHER PTHR11469 1 536 3.4E-293 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 SUPERFAMILY SSF53697 7 538 1.75E-203 T 20-04-2016 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 516 40.873 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 20-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 Gene3D G3DSA:3.40.50.10490 293 498 2.8E-133 T 20-04-2016 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 Gene3D G3DSA:3.40.50.10490 11 99 2.8E-133 T 20-04-2016 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 Gene3D G3DSA:1.10.1390.10 499 538 1.4E-17 T 20-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 4.5E-50 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 475 489 4.5E-50 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 457 475 4.5E-50 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 4.5E-50 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 489 502 4.5E-50 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 4.5E-50 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 489 506 - T 20-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 Pfam PF00342 Phosphoglucose isomerase 53 532 1.1E-215 T 20-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 PANTHER PTHR11469:SF11 1 536 3.4E-293 T 20-04-2016 APS56_RS12155 4d87d501816b062ee9647c53a2e4baf3 539 Gene3D G3DSA:3.40.50.10490 100 290 2.1E-79 T 20-04-2016 APS56_RS00570 70278a310d3e1679bf00cfdfe9d975de 217 PANTHER PTHR10683 1 215 3.0E-74 T 20-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APS56_RS00570 70278a310d3e1679bf00cfdfe9d975de 217 SUPERFAMILY SSF51569 1 215 3.87E-71 T 20-04-2016 APS56_RS00570 70278a310d3e1679bf00cfdfe9d975de 217 Hamap MF_00494 Probable transaldolase [tal]. 1 217 43.785 T 20-04-2016 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APS56_RS00570 70278a310d3e1679bf00cfdfe9d975de 217 Gene3D G3DSA:3.20.20.70 1 215 2.0E-67 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS00570 70278a310d3e1679bf00cfdfe9d975de 217 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 215 4.0E-85 T 20-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APS56_RS00570 70278a310d3e1679bf00cfdfe9d975de 217 Pfam PF00923 Transaldolase 3 206 3.1E-56 T 20-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APS56_RS00570 70278a310d3e1679bf00cfdfe9d975de 217 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 20-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APS56_RS07390 890971dad7bdee23359bc31e09ab6d91 254 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 216 2.1E-46 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APS56_RS07390 890971dad7bdee23359bc31e09ab6d91 254 SUPERFAMILY SSF53790 2 241 4.32E-69 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APS56_RS07390 890971dad7bdee23359bc31e09ab6d91 254 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 7 239 2.1E-81 T 20-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APS56_RS07390 890971dad7bdee23359bc31e09ab6d91 254 Gene3D G3DSA:3.40.1010.10 6 121 4.4E-39 T 20-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APS56_RS07390 890971dad7bdee23359bc31e09ab6d91 254 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 11 25 - T 20-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APS56_RS07390 890971dad7bdee23359bc31e09ab6d91 254 Gene3D G3DSA:3.30.950.10 122 243 5.2E-35 T 20-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APS56_RS07390 890971dad7bdee23359bc31e09ab6d91 254 PANTHER PTHR21091 7 237 1.7E-63 T 20-04-2016 APS56_RS07390 890971dad7bdee23359bc31e09ab6d91 254 PANTHER PTHR21091:SF16 7 237 1.7E-63 T 20-04-2016 APS56_RS09450 761fcde951008550f720f00c2531d056 113 Pfam PF00543 Nitrogen regulatory protein P-II 4 104 8.8E-31 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09450 761fcde951008550f720f00c2531d056 113 ProSitePatterns PS00638 P-II protein C-terminal region signature. 82 95 - T 20-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APS56_RS09450 761fcde951008550f720f00c2531d056 113 SUPERFAMILY SSF54913 1 110 1.24E-31 T 20-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APS56_RS09450 761fcde951008550f720f00c2531d056 113 SMART SM00938 4 104 8.6E-37 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09450 761fcde951008550f720f00c2531d056 113 Gene3D G3DSA:3.30.70.120 1 109 1.5E-34 T 20-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APS56_RS09450 761fcde951008550f720f00c2531d056 113 PRINTS PR00340 P-II protein signature 82 102 7.07E-20 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09450 761fcde951008550f720f00c2531d056 113 PRINTS PR00340 P-II protein signature 23 41 7.07E-20 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09450 761fcde951008550f720f00c2531d056 113 PRINTS PR00340 P-II protein signature 51 74 7.07E-20 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09450 761fcde951008550f720f00c2531d056 113 PRINTS PR00340 P-II protein signature 2 17 7.07E-20 T 20-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APS56_RS09450 761fcde951008550f720f00c2531d056 113 PANTHER PTHR30115 1 109 2.4E-30 T 20-04-2016 APS56_RS06135 b6f67af85057fbee481a3fd5a4c88cc2 559 PANTHER PTHR10030 11 324 9.8E-74 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS06135 b6f67af85057fbee481a3fd5a4c88cc2 559 SMART SM00812 5 366 1.3E-114 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS06135 b6f67af85057fbee481a3fd5a4c88cc2 559 PRINTS PR00741 Glycosyl hydrolase family 29 signature 304 326 1.5E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS06135 b6f67af85057fbee481a3fd5a4c88cc2 559 PRINTS PR00741 Glycosyl hydrolase family 29 signature 271 292 1.5E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS06135 b6f67af85057fbee481a3fd5a4c88cc2 559 PRINTS PR00741 Glycosyl hydrolase family 29 signature 87 103 1.5E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS06135 b6f67af85057fbee481a3fd5a4c88cc2 559 Pfam PF01120 Alpha-L-fucosidase 9 318 1.9E-90 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS06135 b6f67af85057fbee481a3fd5a4c88cc2 559 Gene3D G3DSA:3.20.20.80 5 321 2.6E-100 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS06135 b6f67af85057fbee481a3fd5a4c88cc2 559 SUPERFAMILY SSF51445 6 321 4.11E-97 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS04785 569c80efe840e54bc542aa9619bdb69f 548 SUPERFAMILY SSF51126 1 150 2.62E-14 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS04785 569c80efe840e54bc542aa9619bdb69f 548 SUPERFAMILY SSF51126 218 321 2.62E-14 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS04785 569c80efe840e54bc542aa9619bdb69f 548 SUPERFAMILY SSF51126 401 547 5.09E-5 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS04785 569c80efe840e54bc542aa9619bdb69f 548 Pfam PF12708 Pectate lyase superfamily protein 1 230 6.3E-7 T 20-04-2016 IPR024535 Pectate lyase superfamily protein APS56_RS04785 569c80efe840e54bc542aa9619bdb69f 548 Gene3D G3DSA:2.160.20.10 220 304 3.1E-18 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS04785 569c80efe840e54bc542aa9619bdb69f 548 Gene3D G3DSA:2.160.20.10 396 533 3.1E-18 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS04785 569c80efe840e54bc542aa9619bdb69f 548 Gene3D G3DSA:2.160.20.10 1 131 3.1E-18 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 SUPERFAMILY SSF82866 289 483 3.79E-37 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 SUPERFAMILY SSF82714 733 808 4.58E-12 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 SUPERFAMILY SSF82693 138 179 3.92E-6 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 SUPERFAMILY SSF82693 266 309 3.92E-6 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 Gene3D G3DSA:3.30.2090.10 733 806 5.2E-9 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 SUPERFAMILY SSF82866 810 1030 2.35E-42 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 SUPERFAMILY SSF82714 182 262 4.05E-13 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 Pfam PF00873 AcrB/AcrD/AcrF family 5 1028 3.7E-162 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 PANTHER PTHR32063:SF33 1 1027 1.0E-263 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 Gene3D G3DSA:1.10.3850.10 814 1030 2.1E-51 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 Gene3D G3DSA:3.30.70.1430 41 135 3.9E-24 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 SUPERFAMILY SSF82693 41 131 5.58E-22 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 PRINTS PR00702 Acriflavin resistance protein family signature 459 482 4.0E-24 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 PRINTS PR00702 Acriflavin resistance protein family signature 323 346 4.0E-24 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 PRINTS PR00702 Acriflavin resistance protein family signature 381 405 4.0E-24 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 4.0E-24 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 4.0E-24 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 PRINTS PR00702 Acriflavin resistance protein family signature 630 644 4.0E-24 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 Gene3D G3DSA:3.30.2090.10 180 264 8.3E-14 T 20-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 PANTHER PTHR32063 1 1027 1.0E-263 T 20-04-2016 APS56_RS07150 e56d4d2e29cdb0a979401bdc2c3b4b65 1065 Gene3D G3DSA:1.20.1640.10 286 496 2.1E-43 T 20-04-2016 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 Pfam PF08245 Mur ligase middle domain 117 286 1.5E-21 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 306 392 4.5E-23 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 8 437 1.7E-110 T 20-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 SUPERFAMILY SSF53623 98 304 3.92E-57 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 SUPERFAMILY SSF51984 7 98 1.1E-18 T 20-04-2016 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 PANTHER PTHR23135:SF5 1 438 5.0E-146 T 20-04-2016 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 Gene3D G3DSA:3.90.190.20 308 445 2.1E-44 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 Pfam PF01225 Mur ligase family, catalytic domain 9 109 7.6E-12 T 20-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 PANTHER PTHR23135 1 438 5.0E-146 T 20-04-2016 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 Gene3D G3DSA:3.40.1190.10 100 307 1.6E-57 T 20-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 SUPERFAMILY SSF53244 305 443 6.23E-39 T 20-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 Gene3D G3DSA:3.40.50.720 8 99 3.1E-19 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS08455 35a6c0fd1625c404a2531a24b43b07e0 450 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 6 448 32.0 T 20-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 Gene3D G3DSA:3.40.309.10 224 407 5.5E-57 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 PIRSF PIRSF036492 1 456 5.8E-184 T 20-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 236 247 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 Pfam PF00171 Aldehyde dehydrogenase family 7 427 2.7E-88 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 PANTHER PTHR11699:SF119 1 456 5.2E-170 T 20-04-2016 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 Gene3D G3DSA:3.40.605.10 2 223 3.4E-59 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 SUPERFAMILY SSF53720 2 440 7.46E-121 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 PANTHER PTHR11699 1 456 5.2E-170 T 20-04-2016 APS56_RS15400 a4240cda59d9cbc1f952f8065928acb3 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 208 215 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APS56_RS11685 cd15f82b48fcb6faa34734409d5f41c8 158 Pfam PF02631 RecX family 42 146 1.1E-18 T 20-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APS56_RS11685 cd15f82b48fcb6faa34734409d5f41c8 158 PANTHER PTHR33602 19 150 1.1E-17 T 20-04-2016 APS56_RS11685 cd15f82b48fcb6faa34734409d5f41c8 158 Gene3D G3DSA:1.10.10.10 59 102 1.5E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS11685 cd15f82b48fcb6faa34734409d5f41c8 158 PANTHER PTHR33602:SF1 19 150 1.1E-17 T 20-04-2016 APS56_RS10890 6e6bae55c4f605ed272400b435880670 171 SMART SM00935 9 166 5.4E-26 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APS56_RS10890 6e6bae55c4f605ed272400b435880670 171 PANTHER PTHR35089 1 171 8.9E-17 T 20-04-2016 APS56_RS10890 6e6bae55c4f605ed272400b435880670 171 PANTHER PTHR35089:SF1 1 171 8.9E-17 T 20-04-2016 APS56_RS10890 6e6bae55c4f605ed272400b435880670 171 Gene3D G3DSA:3.30.910.20 93 166 4.0E-13 T 20-04-2016 APS56_RS10890 6e6bae55c4f605ed272400b435880670 171 Gene3D G3DSA:3.30.910.20 10 56 4.0E-13 T 20-04-2016 APS56_RS10890 6e6bae55c4f605ed272400b435880670 171 Pfam PF03938 Outer membrane protein (OmpH-like) 7 165 5.3E-26 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APS56_RS10890 6e6bae55c4f605ed272400b435880670 171 SUPERFAMILY SSF111384 20 166 2.35E-17 T 20-04-2016 IPR024930 Skp domain APS56_RS09845 00c794d343cd88586003b49c9f381179 390 Pfam PF16344 Domain of unknown function (DUF4974) 287 387 4.5E-21 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS09845 00c794d343cd88586003b49c9f381179 390 Pfam PF04773 FecR protein 182 276 7.5E-16 T 20-04-2016 IPR006860 FecR protein APS56_RS09845 00c794d343cd88586003b49c9f381179 390 PANTHER PTHR30273 179 387 1.5E-57 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS09845 00c794d343cd88586003b49c9f381179 390 PANTHER PTHR30273 1 116 1.5E-57 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS09845 00c794d343cd88586003b49c9f381179 390 PANTHER PTHR30273:SF2 179 387 1.5E-57 T 20-04-2016 APS56_RS09845 00c794d343cd88586003b49c9f381179 390 PANTHER PTHR30273:SF2 1 116 1.5E-57 T 20-04-2016 APS56_RS00195 e3de41f6057810f586b508553a742738 313 Pfam PF02517 CAAX protease self-immunity 143 240 6.1E-13 T 20-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 APS56_RS12470 af4c36b96399eb7ab4e2e658ad046d10 197 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 185 3.1E-69 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APS56_RS12470 af4c36b96399eb7ab4e2e658ad046d10 197 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 5 193 3.6E-80 T 20-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APS56_RS12470 af4c36b96399eb7ab4e2e658ad046d10 197 PANTHER PTHR30586 2 190 1.6E-97 T 20-04-2016 APS56_RS12470 af4c36b96399eb7ab4e2e658ad046d10 197 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 196 26.95 T 20-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APS56_RS12470 af4c36b96399eb7ab4e2e658ad046d10 197 PIRSF PIRSF006102 1 197 1.4E-71 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APS56_RS12470 af4c36b96399eb7ab4e2e658ad046d10 197 PANTHER PTHR30586:SF0 2 190 1.6E-97 T 20-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PANTHER PTHR24322 12 139 7.4E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PANTHER PTHR24322 155 183 7.4E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 SUPERFAMILY SSF51735 6 254 7.43E-67 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.8E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.8E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.8E-7 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 253 2.8E-44 T 20-04-2016 APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 Gene3D G3DSA:3.40.50.720 1 253 4.9E-66 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.1E-27 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.1E-27 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.1E-27 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 8.1E-27 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 8.1E-27 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 8.1E-27 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05885 b8d3cdb2963c417ba352e7715b0b0467 262 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 188 0.0014 T 20-04-2016 APS56_RS01345 730a7fcdccbfce3a6c71b56c29ad5f9f 375 PANTHER PTHR11236 324 366 1.4E-45 T 20-04-2016 APS56_RS01345 730a7fcdccbfce3a6c71b56c29ad5f9f 375 PANTHER PTHR11236 91 302 1.4E-45 T 20-04-2016 APS56_RS01345 730a7fcdccbfce3a6c71b56c29ad5f9f 375 SUPERFAMILY SSF56322 34 374 1.31E-65 T 20-04-2016 IPR005801 ADC synthase GO:0009058 APS56_RS01345 730a7fcdccbfce3a6c71b56c29ad5f9f 375 Pfam PF00425 chorismate binding enzyme 101 366 2.5E-54 T 20-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APS56_RS01345 730a7fcdccbfce3a6c71b56c29ad5f9f 375 PANTHER PTHR11236:SF3 324 366 1.4E-45 T 20-04-2016 APS56_RS01345 730a7fcdccbfce3a6c71b56c29ad5f9f 375 PANTHER PTHR11236:SF3 91 302 1.4E-45 T 20-04-2016 APS56_RS01345 730a7fcdccbfce3a6c71b56c29ad5f9f 375 Gene3D G3DSA:3.60.120.10 73 373 4.7E-60 T 20-04-2016 IPR005801 ADC synthase GO:0009058 APS56_RS06295 281fc6536d54b717dced4d81cd7e87bb 137 Gene3D G3DSA:3.10.50.30 49 130 1.4E-22 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APS56_RS06295 281fc6536d54b717dced4d81cd7e87bb 137 PANTHER PTHR30437:SF5 40 129 2.7E-20 T 20-04-2016 APS56_RS06295 281fc6536d54b717dced4d81cd7e87bb 137 PANTHER PTHR30437 40 129 2.7E-20 T 20-04-2016 APS56_RS06295 281fc6536d54b717dced4d81cd7e87bb 137 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 55 127 1.8E-20 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APS56_RS06295 281fc6536d54b717dced4d81cd7e87bb 137 SUPERFAMILY SSF54534 56 127 2.22E-16 T 20-04-2016 APS56_RS11605 047358a30f56873a588bb886eb451418 339 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 336 2.0E-94 T 20-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APS56_RS11605 047358a30f56873a588bb886eb451418 339 PANTHER PTHR11538 97 336 2.3E-97 T 20-04-2016 APS56_RS11605 047358a30f56873a588bb886eb451418 339 Gene3D G3DSA:3.30.930.10 12 336 1.5E-121 T 20-04-2016 APS56_RS11605 047358a30f56873a588bb886eb451418 339 SUPERFAMILY SSF55681 89 336 8.24E-75 T 20-04-2016 APS56_RS11605 047358a30f56873a588bb886eb451418 339 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 2 335 41.373 T 20-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APS56_RS11605 047358a30f56873a588bb886eb451418 339 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 18 82 1.1E-19 T 20-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APS56_RS11605 047358a30f56873a588bb886eb451418 339 SUPERFAMILY SSF46589 13 74 1.05E-13 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APS56_RS11605 047358a30f56873a588bb886eb451418 339 Pfam PF01409 tRNA synthetases class II core domain (F) 89 335 6.1E-97 T 20-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APS56_RS02915 98b15e4eb3693c066c4201d24a99fb00 394 SUPERFAMILY SSF53335 85 206 5.25E-16 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02915 98b15e4eb3693c066c4201d24a99fb00 394 Gene3D G3DSA:3.40.50.150 79 192 3.8E-9 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02915 98b15e4eb3693c066c4201d24a99fb00 394 Pfam PF03848 Tellurite resistance protein TehB 62 159 1.5E-5 T 20-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Hamap MF_01961 Catalase-peroxidase [katG]. 4 718 38.944 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Gene3D G3DSA:1.10.420.10 576 696 9.3E-44 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 264 287 4.9E-51 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 23 45 4.9E-51 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 64 89 4.9E-51 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 49 62 4.9E-51 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 475 501 4.9E-51 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Gene3D G3DSA:1.10.420.10 307 406 1.7E-42 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Gene3D G3DSA:1.10.420.10 250 271 1.7E-42 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 SUPERFAMILY SSF48113 428 718 8.99E-112 T 20-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00458 Haem peroxidase superfamily signature 315 330 1.1E-17 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00458 Haem peroxidase superfamily signature 147 164 1.1E-17 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00458 Haem peroxidase superfamily signature 256 271 1.1E-17 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00458 Haem peroxidase superfamily signature 165 177 1.1E-17 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PRINTS PR00458 Haem peroxidase superfamily signature 87 101 1.1E-17 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Gene3D G3DSA:1.10.520.10 431 575 4.2E-55 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Gene3D G3DSA:1.10.520.10 236 249 1.6E-73 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Gene3D G3DSA:1.10.520.10 44 198 1.6E-73 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Gene3D G3DSA:1.10.520.10 699 718 4.2E-55 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 7 718 0.0 T 20-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 SUPERFAMILY SSF48113 15 428 2.8E-141 T 20-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PANTHER PTHR30555:SF0 1 718 0.0 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Pfam PF00141 Peroxidase 402 695 3.9E-38 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 Pfam PF00141 Peroxidase 74 394 1.7E-46 T 20-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 PANTHER PTHR30555 1 718 0.0 T 20-04-2016 APS56_RS02420 aabe939087a8b1158423d906e724f3ed 718 ProSitePatterns PS00436 Peroxidases active site signature. 87 98 - T 20-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 APS56_RS03805 f1f9068cab0d30a3774c040ba55a1be3 109 Gene3D G3DSA:1.10.10.10 8 102 1.4E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS03805 f1f9068cab0d30a3774c040ba55a1be3 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 8.9E-7 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS03805 f1f9068cab0d30a3774c040ba55a1be3 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 8.9E-7 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS03805 f1f9068cab0d30a3774c040ba55a1be3 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 53 68 8.9E-7 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS03805 f1f9068cab0d30a3774c040ba55a1be3 109 Pfam PF01022 Bacterial regulatory protein, arsR family 25 71 1.2E-12 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS03805 f1f9068cab0d30a3774c040ba55a1be3 109 SUPERFAMILY SSF46785 11 100 7.52E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS03805 f1f9068cab0d30a3774c040ba55a1be3 109 SMART SM00418 18 100 4.2E-12 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS03805 f1f9068cab0d30a3774c040ba55a1be3 109 PANTHER PTHR33154 21 109 9.4E-12 T 20-04-2016 APS56_RS13115 b352eb0c71e7701e21339f322593dc95 168 SUPERFAMILY SSF111384 24 166 1.05E-26 T 20-04-2016 IPR024930 Skp domain APS56_RS13115 b352eb0c71e7701e21339f322593dc95 168 PANTHER PTHR35089 5 144 7.8E-23 T 20-04-2016 APS56_RS13115 b352eb0c71e7701e21339f322593dc95 168 Pfam PF03938 Outer membrane protein (OmpH-like) 12 166 1.6E-38 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APS56_RS13115 b352eb0c71e7701e21339f322593dc95 168 Gene3D G3DSA:3.30.910.20 84 167 7.0E-15 T 20-04-2016 APS56_RS13115 b352eb0c71e7701e21339f322593dc95 168 Gene3D G3DSA:3.30.910.20 16 83 2.6E-11 T 20-04-2016 APS56_RS13115 b352eb0c71e7701e21339f322593dc95 168 SMART SM00935 12 167 4.0E-41 T 20-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APS56_RS04450 f9b5481fe1c42a0d56af7d1cf3640bde 236 Gene3D G3DSA:3.40.50.150 6 233 3.5E-55 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS04450 f9b5481fe1c42a0d56af7d1cf3640bde 236 PANTHER PTHR39963 3 232 1.1E-29 T 20-04-2016 APS56_RS04450 f9b5481fe1c42a0d56af7d1cf3640bde 236 SUPERFAMILY SSF53335 58 228 4.98E-9 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS04450 f9b5481fe1c42a0d56af7d1cf3640bde 236 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 152 232 4.0E-20 T 20-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 APS56_RS06925 15e6a183ee19a48c515f882c03ea65ab 169 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 26 162 1.1E-17 T 20-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 APS56_RS06925 15e6a183ee19a48c515f882c03ea65ab 169 PANTHER PTHR36929:SF1 14 169 6.4E-26 T 20-04-2016 APS56_RS06925 15e6a183ee19a48c515f882c03ea65ab 169 SUPERFAMILY SSF55961 12 162 2.05E-36 T 20-04-2016 APS56_RS06925 15e6a183ee19a48c515f882c03ea65ab 169 Gene3D G3DSA:3.30.530.20 8 163 1.2E-38 T 20-04-2016 IPR023393 START-like domain APS56_RS06925 15e6a183ee19a48c515f882c03ea65ab 169 PANTHER PTHR36929 14 169 6.4E-26 T 20-04-2016 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 SMART SM00387 742 866 7.5E-21 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Pfam PF00512 His Kinase A (phospho-acceptor) domain 634 697 3.5E-7 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 SUPERFAMILY SSF55785 508 614 2.42E-12 T 20-04-2016 IPR000014 PAS domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Gene3D G3DSA:3.30.450.20 358 478 3.3E-11 T 20-04-2016 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Gene3D G3DSA:3.30.450.20 215 335 7.7E-7 T 20-04-2016 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 PANTHER PTHR24423 475 866 4.1E-58 T 20-04-2016 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 PANTHER PTHR24423 1 11 4.1E-58 T 20-04-2016 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 SMART SM00388 632 700 1.3E-5 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Pfam PF13426 PAS domain 249 324 0.18 T 20-04-2016 IPR000014 PAS domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Pfam PF13426 PAS domain 391 478 5.4E-5 T 20-04-2016 IPR000014 PAS domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 747 865 9.5E-17 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 PRINTS PR00344 Bacterial sensor protein C-terminal signature 812 822 1.6E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 PRINTS PR00344 Bacterial sensor protein C-terminal signature 851 864 1.6E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 PRINTS PR00344 Bacterial sensor protein C-terminal signature 827 845 1.6E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 PRINTS PR00344 Bacterial sensor protein C-terminal signature 794 808 1.6E-10 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 SUPERFAMILY SSF55785 249 335 9.77E-5 T 20-04-2016 IPR000014 PAS domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 546 619 1.1E-6 T 20-04-2016 IPR000014 PAS domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Gene3D G3DSA:3.30.450.20 488 627 8.1E-16 T 20-04-2016 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Gene3D G3DSA:1.10.287.130 628 696 2.0E-8 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 SUPERFAMILY SSF55874 690 864 4.06E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Gene3D G3DSA:3.30.565.10 702 864 6.0E-31 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 SUPERFAMILY SSF55785 391 481 1.92E-8 T 20-04-2016 IPR000014 PAS domain APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 PANTHER PTHR24423:SF518 475 866 4.1E-58 T 20-04-2016 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 PANTHER PTHR24423:SF518 1 11 4.1E-58 T 20-04-2016 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 Pfam PF08447 PAS fold 522 606 4.7E-12 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 APS56_RS00365 56ba6ef1c589770f377be8e7cb388d6b 866 SUPERFAMILY SSF47384 619 698 1.49E-11 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS04060 85fab8315a48f19aacd9a69dd896902c 166 Gene3D G3DSA:3.40.50.2020 6 159 3.8E-25 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS04060 85fab8315a48f19aacd9a69dd896902c 166 PANTHER PTHR11608 1 157 7.0E-20 T 20-04-2016 APS56_RS04060 85fab8315a48f19aacd9a69dd896902c 166 Pfam PF00156 Phosphoribosyl transferase domain 5 145 3.1E-25 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APS56_RS04060 85fab8315a48f19aacd9a69dd896902c 166 SUPERFAMILY SSF53271 5 156 5.65E-26 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 24 178 2.1E-37 T 20-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 177 3.0E-21 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 SUPERFAMILY SSF88946 6 97 6.67E-13 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 PANTHER PTHR30173:SF20 1 187 2.2E-35 T 20-04-2016 APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 Gene3D G3DSA:1.10.10.10 115 178 6.0E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 Pfam PF08281 Sigma-70, region 4 123 174 9.4E-15 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 SUPERFAMILY SSF88659 114 178 3.36E-14 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 PANTHER PTHR30173 1 187 2.2E-35 T 20-04-2016 APS56_RS15765 6e544e342a4e49d24575fa3081c377c4 188 Gene3D G3DSA:1.10.1740.10 7 95 6.4E-14 T 20-04-2016 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 Pfam PF00884 Sulfatase 38 393 5.3E-65 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 SUPERFAMILY SSF53649 37 149 2.62E-108 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 SUPERFAMILY SSF53649 177 498 2.62E-108 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 Gene3D G3DSA:3.40.720.10 36 401 2.2E-99 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 PANTHER PTHR10342:SF199 167 525 1.9E-130 T 20-04-2016 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 PANTHER PTHR10342:SF199 5 146 1.9E-130 T 20-04-2016 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 PANTHER PTHR10342 167 525 1.9E-130 T 20-04-2016 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 PANTHER PTHR10342 5 146 1.9E-130 T 20-04-2016 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 Gene3D G3DSA:3.30.1120.10 405 496 1.4E-14 T 20-04-2016 APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 ProSitePatterns PS00523 Sulfatases signature 1. 85 97 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS02985 a47b80a86b7f99ac0466edf49652b62e 528 ProSitePatterns PS00149 Sulfatases signature 2. 133 143 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS06335 e6c5cb73e657e7f9e230cfde0e460ef7 487 Pfam PF14322 Starch-binding associating with outer membrane 27 211 2.1E-22 T 20-04-2016 APS56_RS06335 e6c5cb73e657e7f9e230cfde0e460ef7 487 Pfam PF07980 SusD family 304 483 2.0E-34 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS06335 e6c5cb73e657e7f9e230cfde0e460ef7 487 Gene3D G3DSA:1.25.40.10 194 296 9.9E-29 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06335 e6c5cb73e657e7f9e230cfde0e460ef7 487 Gene3D G3DSA:1.25.40.10 333 427 9.9E-29 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06335 e6c5cb73e657e7f9e230cfde0e460ef7 487 SUPERFAMILY SSF48452 11 483 1.52E-97 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09555 a80e116e29f23eecd66869a362154254 444 SUPERFAMILY SSF51735 34 205 2.08E-27 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09555 a80e116e29f23eecd66869a362154254 444 PANTHER PTHR22604:SF92 1 409 9.9E-83 T 20-04-2016 APS56_RS09555 a80e116e29f23eecd66869a362154254 444 PANTHER PTHR22604 1 409 9.9E-83 T 20-04-2016 APS56_RS09555 a80e116e29f23eecd66869a362154254 444 Gene3D G3DSA:3.30.360.10 191 401 1.8E-31 T 20-04-2016 APS56_RS09555 a80e116e29f23eecd66869a362154254 444 Gene3D G3DSA:3.40.50.720 35 190 2.2E-28 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09555 a80e116e29f23eecd66869a362154254 444 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 39 168 9.0E-8 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS09555 a80e116e29f23eecd66869a362154254 444 SUPERFAMILY SSF55347 179 353 5.07E-23 T 20-04-2016 APS56_RS12705 bc08a68e60d8abd7971341b5bfdf771f 550 Pfam PF17161 Domain of unknown function (DUF5123) 422 546 1.0E-14 T 20-04-2016 IPR033427 Domain of unknown function DUF5123 APS56_RS12705 bc08a68e60d8abd7971341b5bfdf771f 550 SUPERFAMILY SSF51126 251 531 5.14E-12 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS12705 bc08a68e60d8abd7971341b5bfdf771f 550 Pfam PF16318 Domain of unknown function (DUF4957) 277 407 1.4E-12 T 20-04-2016 IPR032530 Domain of unknown function DUF4957 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 PANTHER PTHR21091 1 221 9.1E-92 T 20-04-2016 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 221 37.229 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 Gene3D G3DSA:3.40.1010.10 3 111 5.9E-17 T 20-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 SUPERFAMILY SSF53790 2 219 3.27E-81 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 PIRSF PIRSF005917 1 223 2.0E-94 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 PANTHER PTHR21091:SF18 1 221 9.1E-92 T 20-04-2016 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 Gene3D G3DSA:3.30.950.10 112 222 1.1E-40 T 20-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 4 222 8.4E-79 T 20-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 81 92 - T 20-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS11265 9ee9434a5c8a4e527960dae901208b68 223 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 201 4.9E-27 T 20-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APS56_RS00390 56d975bb2b7a0e03e58de25e22a6bf84 295 Pfam PF03631 Virulence factor BrkB 36 289 8.0E-49 T 20-04-2016 IPR017039 Virulence factor BrkB APS56_RS00390 56d975bb2b7a0e03e58de25e22a6bf84 295 PANTHER PTHR30213 18 290 1.8E-56 T 20-04-2016 APS56_RS00390 56d975bb2b7a0e03e58de25e22a6bf84 295 PIRSF PIRSF035875 6 295 8.4E-54 T 20-04-2016 IPR017039 Virulence factor BrkB APS56_RS00390 56d975bb2b7a0e03e58de25e22a6bf84 295 PANTHER PTHR30213:SF1 18 290 1.8E-56 T 20-04-2016 APS56_RS09440 c154e94525cb54055b90a285b2044b25 333 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 25 333 9.3E-61 T 20-04-2016 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 APS56_RS09440 c154e94525cb54055b90a285b2044b25 333 SUPERFAMILY SSF56935 132 311 4.58E-7 T 20-04-2016 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1179 1251 2.9E-11 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 SUPERFAMILY SSF74650 524 811 3.24E-50 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 Gene3D G3DSA:2.60.220.10 818 938 7.2E-25 T 20-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 PANTHER PTHR37322 269 938 3.9E-72 T 20-04-2016 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 537 798 3.2E-29 T 20-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 SUPERFAMILY SSF49785 9 169 1.36E-26 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 SUPERFAMILY SSF49863 818 938 9.81E-18 T 20-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 Gene3D G3DSA:2.70.98.10 524 810 9.8E-66 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 PANTHER PTHR37322:SF1 269 938 3.9E-72 T 20-04-2016 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 Gene3D G3DSA:1.50.10.100 191 517 2.7E-68 T 20-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 SUPERFAMILY SSF48230 184 514 2.47E-46 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 Gene3D G3DSA:2.60.120.410 5 170 8.8E-37 T 20-04-2016 IPR015176 Lyase, N-terminal APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 Pfam PF09092 Lyase, N terminal 9 169 1.8E-31 T 20-04-2016 IPR015176 Lyase, N-terminal APS56_RS04640 fbbec982aa536c835f8515a8ee4e28d8 1251 Pfam PF09093 Lyase, catalytic 194 484 8.3E-56 T 20-04-2016 IPR015177 Lyase, catalytic APS56_RS05990 1730aded5fb3c84206365ea5679dd1e0 918 Pfam PF12215 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 94 402 1.1E-36 T 20-04-2016 IPR024462 Glycosyl-hydrolase family 116, N-terminal KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45 APS56_RS05990 1730aded5fb3c84206365ea5679dd1e0 918 Pfam PF04685 Glycosyl-hydrolase family 116, catalytic region 519 798 4.7E-36 T 20-04-2016 IPR006775 Glycosyl-hydrolase family 116, catalytic region GO:0004553 KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45 APS56_RS05990 1730aded5fb3c84206365ea5679dd1e0 918 Gene3D G3DSA:1.50.10.10 544 641 4.0E-4 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS05990 1730aded5fb3c84206365ea5679dd1e0 918 SUPERFAMILY SSF48208 527 821 1.65E-18 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS05990 1730aded5fb3c84206365ea5679dd1e0 918 PANTHER PTHR12654 92 695 2.4E-26 T 20-04-2016 APS56_RS05990 1730aded5fb3c84206365ea5679dd1e0 918 PANTHER PTHR12654 711 769 2.4E-26 T 20-04-2016 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 100.384 T 20-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 Pfam PF00202 Aminotransferase class-III 34 414 9.5E-87 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 PANTHER PTHR11986 1 428 5.2E-206 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 PANTHER PTHR11986:SF5 1 428 5.2E-206 T 20-04-2016 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 427 6.8E-185 T 20-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 SUPERFAMILY SSF53383 3 427 1.48E-128 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 Gene3D G3DSA:3.90.1150.10 4 71 1.6E-39 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 Gene3D G3DSA:3.90.1150.10 322 426 1.6E-39 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 Gene3D G3DSA:3.40.640.10 73 317 1.8E-83 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS13620 7e66b4e6b98b79f819c851d9bb2ef06d 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 PANTHER PTHR10772 4 91 1.8E-40 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 PRINTS PR00297 10kDa chaperonin signature 78 91 6.7E-32 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 PRINTS PR00297 10kDa chaperonin signature 5 20 6.7E-32 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 PRINTS PR00297 10kDa chaperonin signature 57 69 6.7E-32 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 PRINTS PR00297 10kDa chaperonin signature 27 48 6.7E-32 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 Hamap MF_00580 10 kDa chaperonin [groS]. 4 91 23.293 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 ProSitePatterns PS00681 Chaperonins cpn10 signature. 5 29 - T 20-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 SUPERFAMILY SSF50129 3 91 5.84E-32 T 20-04-2016 IPR011032 GroES-like APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 SMART SM00883 4 91 9.6E-52 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 Gene3D G3DSA:2.30.33.40 4 91 5.7E-35 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS07235 7946c5fa4c5d202fca06f5ab7e6c4115 91 Pfam PF00166 Chaperonin 10 Kd subunit 4 91 2.4E-33 T 20-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APS56_RS11785 49c28b2868d003499ea2033e8ad58057 259 SUPERFAMILY SSF53474 5 257 2.68E-44 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS11785 49c28b2868d003499ea2033e8ad58057 259 Pfam PF00561 alpha/beta hydrolase fold 19 119 1.5E-18 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS11785 49c28b2868d003499ea2033e8ad58057 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.6E-5 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS11785 49c28b2868d003499ea2033e8ad58057 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 88 101 1.6E-5 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS11785 49c28b2868d003499ea2033e8ad58057 259 Gene3D G3DSA:3.40.50.1820 4 258 2.3E-46 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS11785 49c28b2868d003499ea2033e8ad58057 259 PANTHER PTHR10992 7 258 4.0E-40 T 20-04-2016 APS56_RS08010 bf726ff3020a87a2001d21f13610d73c 526 PANTHER PTHR30176 215 510 4.1E-15 T 20-04-2016 APS56_RS08010 bf726ff3020a87a2001d21f13610d73c 526 Pfam PF13187 4Fe-4S dicluster domain 448 494 2.2E-6 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS08010 bf726ff3020a87a2001d21f13610d73c 526 SUPERFAMILY SSF54862 417 497 1.67E-12 T 20-04-2016 APS56_RS08010 bf726ff3020a87a2001d21f13610d73c 526 Gene3D G3DSA:3.30.70.20 419 503 9.7E-14 T 20-04-2016 APS56_RS08010 bf726ff3020a87a2001d21f13610d73c 526 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 449 460 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS08010 bf726ff3020a87a2001d21f13610d73c 526 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 480 491 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS08010 bf726ff3020a87a2001d21f13610d73c 526 Pfam PF12801 4Fe-4S binding domain 401 442 0.011 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS08010 bf726ff3020a87a2001d21f13610d73c 526 Pfam PF12801 4Fe-4S binding domain 303 338 3.2E-7 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS01100 55c9863320a7b4e15d632153fec59566 193 PIRSF PIRSF020736 2 193 1.0E-50 T 20-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 APS56_RS01100 55c9863320a7b4e15d632153fec59566 193 SUPERFAMILY SSF47240 2 193 9.92E-67 T 20-04-2016 IPR009078 Ferritin-like superfamily APS56_RS01100 55c9863320a7b4e15d632153fec59566 193 PANTHER PTHR42637 1 192 4.4E-28 T 20-04-2016 APS56_RS01100 55c9863320a7b4e15d632153fec59566 193 Gene3D G3DSA:1.20.1260.10 3 193 8.5E-67 T 20-04-2016 IPR012347 Ferritin-related APS56_RS01100 55c9863320a7b4e15d632153fec59566 193 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 43 192 1.8E-33 T 20-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 APS56_RS01100 55c9863320a7b4e15d632153fec59566 193 PANTHER PTHR42637:SF1 1 192 4.4E-28 T 20-04-2016 APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 Gene3D G3DSA:3.40.50.980 23 183 1.1E-36 T 20-04-2016 APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 SUPERFAMILY SSF56801 327 587 3.4E-109 T 20-04-2016 APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 SUPERFAMILY SSF56801 23 280 3.4E-109 T 20-04-2016 APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 PRINTS PR00154 AMP-binding signature 172 183 7.8E-5 T 20-04-2016 IPR020459 AMP-binding APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 PRINTS PR00154 AMP-binding signature 184 192 7.8E-5 T 20-04-2016 IPR020459 AMP-binding APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 Pfam PF00501 AMP-binding enzyme 28 458 1.8E-100 T 20-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 Gene3D G3DSA:2.30.38.10 386 449 4.3E-20 T 20-04-2016 APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 PANTHER PTHR24096 7 591 2.8E-179 T 20-04-2016 APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 ProSitePatterns PS00455 Putative AMP-binding domain signature. 177 188 - T 20-04-2016 IPR020845 AMP-binding, conserved site APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 Gene3D G3DSA:3.40.50.980 324 381 4.5E-33 T 20-04-2016 APS56_RS07785 f880fca9ee499c5ff8b4e81231ec1639 591 Gene3D G3DSA:3.40.50.980 184 275 4.5E-33 T 20-04-2016 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 204 220 1.0E-22 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 149 173 1.0E-22 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.0E-22 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.0E-22 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 Hamap MF_01685 Ferredoxin--NADP reductase. 3 329 40.331 T 20-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 291 1.1E-30 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PANTHER PTHR22912:SF158 1 317 4.9E-95 T 20-04-2016 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 SUPERFAMILY SSF51905 1 311 2.19E-36 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 Gene3D G3DSA:3.50.50.60 125 242 1.1E-23 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 3.6E-14 T 20-04-2016 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 3.6E-14 T 20-04-2016 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.6E-14 T 20-04-2016 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 PANTHER PTHR22912 1 317 4.9E-95 T 20-04-2016 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 Gene3D G3DSA:3.50.50.60 246 324 1.3E-39 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS07380 efc656aa1d604454e9033d104c5a0f9a 350 Gene3D G3DSA:3.50.50.60 2 124 1.3E-39 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS12395 abe08148145232e1cba77208a769811c 461 PRINTS PR00171 Sugar transporter signature 120 139 6.5E-26 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS12395 abe08148145232e1cba77208a769811c 461 PRINTS PR00171 Sugar transporter signature 21 31 6.5E-26 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS12395 abe08148145232e1cba77208a769811c 461 PRINTS PR00171 Sugar transporter signature 384 396 6.5E-26 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS12395 abe08148145232e1cba77208a769811c 461 PRINTS PR00171 Sugar transporter signature 361 382 6.5E-26 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS12395 abe08148145232e1cba77208a769811c 461 PRINTS PR00171 Sugar transporter signature 276 286 6.5E-26 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS12395 abe08148145232e1cba77208a769811c 461 ProSitePatterns PS00216 Sugar transport proteins signature 1. 320 337 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APS56_RS12395 abe08148145232e1cba77208a769811c 461 Gene3D G3DSA:1.20.1250.20 267 456 1.2E-24 T 20-04-2016 APS56_RS12395 abe08148145232e1cba77208a769811c 461 Gene3D G3DSA:1.20.1250.20 20 224 4.9E-23 T 20-04-2016 APS56_RS12395 abe08148145232e1cba77208a769811c 461 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 5 455 6.6E-131 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS12395 abe08148145232e1cba77208a769811c 461 Pfam PF00083 Sugar (and other) transporter 13 459 1.0E-126 T 20-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APS56_RS12395 abe08148145232e1cba77208a769811c 461 SUPERFAMILY SSF103473 9 456 1.7E-63 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS12395 abe08148145232e1cba77208a769811c 461 PANTHER PTHR23500:SF22 1 461 1.9E-197 T 20-04-2016 APS56_RS12395 abe08148145232e1cba77208a769811c 461 ProSitePatterns PS00217 Sugar transport proteins signature 2. 125 150 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APS56_RS12395 abe08148145232e1cba77208a769811c 461 PANTHER PTHR23500 1 461 1.9E-197 T 20-04-2016 APS56_RS08285 d0baff9ef0d287c99671cf133ee4f896 394 SUPERFAMILY SSF53383 1 393 2.06E-108 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS08285 d0baff9ef0d287c99671cf133ee4f896 394 PANTHER PTHR11751:SF306 14 393 1.8E-150 T 20-04-2016 APS56_RS08285 d0baff9ef0d287c99671cf133ee4f896 394 PANTHER PTHR11751 14 393 1.8E-150 T 20-04-2016 APS56_RS08285 d0baff9ef0d287c99671cf133ee4f896 394 Gene3D G3DSA:3.40.640.10 45 273 4.7E-72 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS08285 d0baff9ef0d287c99671cf133ee4f896 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 20-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APS56_RS08285 d0baff9ef0d287c99671cf133ee4f896 394 Gene3D G3DSA:3.90.1150.10 274 393 1.3E-38 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS08285 d0baff9ef0d287c99671cf133ee4f896 394 Pfam PF00155 Aminotransferase class I and II 32 389 1.1E-67 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 PANTHER PTHR33284 4 205 1.3E-46 T 20-04-2016 APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 Gene3D G3DSA:2.170.120.20 97 182 2.5E-23 T 20-04-2016 IPR020057 Ribosomal protein L25, beta domain APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 4 181 23.652 T 20-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 Pfam PF01386 Ribosomal L25p family 6 91 7.2E-26 T 20-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 177 1.3E-41 T 20-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 178 6.4E-21 T 20-04-2016 IPR020057 Ribosomal protein L25, beta domain APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 Gene3D G3DSA:2.40.240.10 4 93 4.0E-28 T 20-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 18 94 3.0E-19 T 20-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APS56_RS09610 18217e11b02505f7936d05eb1876f6dc 205 SUPERFAMILY SSF50715 11 179 1.7E-50 T 20-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 Gene3D G3DSA:1.10.1200.80 255 322 1.1E-18 T 20-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 PANTHER PTHR11082 3 321 2.2E-119 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 Pfam PF01207 Dihydrouridine synthase (Dus) 16 314 1.1E-84 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 20-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 PIRSF PIRSF006621 1 327 4.8E-99 T 20-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 321 4.2E-97 T 20-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 SUPERFAMILY SSF51395 13 321 9.89E-84 T 20-04-2016 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 PANTHER PTHR11082:SF25 3 321 2.2E-119 T 20-04-2016 APS56_RS11120 314c179b5fa2f5b3baf03e87f0729f42 331 Gene3D G3DSA:3.20.20.70 13 248 4.1E-80 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS11070 801b7914f778e8fd9c9e88c21102d6cc 597 PANTHER PTHR32468:SF4 6 383 1.1E-76 T 20-04-2016 APS56_RS11070 801b7914f778e8fd9c9e88c21102d6cc 597 Pfam PF02254 TrkA-N domain 404 488 5.9E-13 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APS56_RS11070 801b7914f778e8fd9c9e88c21102d6cc 597 PANTHER PTHR32468 6 383 1.1E-76 T 20-04-2016 APS56_RS11070 801b7914f778e8fd9c9e88c21102d6cc 597 Gene3D G3DSA:3.40.50.720 404 505 8.5E-16 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11070 801b7914f778e8fd9c9e88c21102d6cc 597 SUPERFAMILY SSF51735 402 489 1.1E-11 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11070 801b7914f778e8fd9c9e88c21102d6cc 597 Pfam PF00999 Sodium/hydrogen exchanger family 10 384 8.4E-59 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APS56_RS01990 1e42e76f847ac87189e9c268182ebec9 372 PANTHER PTHR30273 171 372 1.6E-62 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS01990 1e42e76f847ac87189e9c268182ebec9 372 PANTHER PTHR30273 20 120 1.6E-62 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS01990 1e42e76f847ac87189e9c268182ebec9 372 Pfam PF04773 FecR protein 170 263 6.4E-16 T 20-04-2016 IPR006860 FecR protein APS56_RS01990 1e42e76f847ac87189e9c268182ebec9 372 Pfam PF16344 Domain of unknown function (DUF4974) 277 372 4.8E-17 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS01990 1e42e76f847ac87189e9c268182ebec9 372 PANTHER PTHR30273:SF2 171 372 1.6E-62 T 20-04-2016 APS56_RS01990 1e42e76f847ac87189e9c268182ebec9 372 PANTHER PTHR30273:SF2 20 120 1.6E-62 T 20-04-2016 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 Pfam PF01229 Glycosyl hydrolases family 39 32 548 2.4E-102 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PRINTS PR00745 Glycosyl hydrolase family 39 signature 496 510 8.7E-19 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PRINTS PR00745 Glycosyl hydrolase family 39 signature 111 127 8.7E-19 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PRINTS PR00745 Glycosyl hydrolase family 39 signature 485 496 8.7E-19 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PRINTS PR00745 Glycosyl hydrolase family 39 signature 160 177 8.7E-19 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PRINTS PR00745 Glycosyl hydrolase family 39 signature 177 193 8.7E-19 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 Gene3D G3DSA:2.60.40.1500 410 547 1.8E-31 T 20-04-2016 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PANTHER PTHR12631 45 235 2.3E-56 T 20-04-2016 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PANTHER PTHR12631 261 535 2.3E-56 T 20-04-2016 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 ProSitePatterns PS01027 Glycosyl hydrolases family 39 active site. 180 189 - T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 SUPERFAMILY SSF51445 43 233 9.15E-78 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 SUPERFAMILY SSF51445 264 416 9.15E-78 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 Gene3D G3DSA:3.20.20.80 45 409 6.2E-97 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PANTHER PTHR12631:SF7 45 235 2.3E-56 T 20-04-2016 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 PANTHER PTHR12631:SF7 261 535 2.3E-56 T 20-04-2016 APS56_RS05925 3d3266ff988b18c16b3ee52b599dfb4e 551 SUPERFAMILY SSF51011 407 547 4.68E-21 T 20-04-2016 APS56_RS13280 4a7079f2845185d69da25a355802e08b 411 SUPERFAMILY SSF56300 160 406 1.57E-34 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS13280 4a7079f2845185d69da25a355802e08b 411 PANTHER PTHR31302 107 409 8.7E-64 T 20-04-2016 APS56_RS13280 4a7079f2845185d69da25a355802e08b 411 PANTHER PTHR31302 1 91 8.7E-64 T 20-04-2016 APS56_RS13280 4a7079f2845185d69da25a355802e08b 411 Gene3D G3DSA:3.60.21.10 163 349 5.5E-24 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS13280 4a7079f2845185d69da25a355802e08b 411 PANTHER PTHR31302:SF6 107 409 8.7E-64 T 20-04-2016 APS56_RS13280 4a7079f2845185d69da25a355802e08b 411 PANTHER PTHR31302:SF6 1 91 8.7E-64 T 20-04-2016 APS56_RS13280 4a7079f2845185d69da25a355802e08b 411 Pfam PF00149 Calcineurin-like phosphoesterase 164 344 7.8E-15 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 SUPERFAMILY SSF47917 397 519 2.46E-39 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 4.1E-14 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 Gene3D G3DSA:3.40.50.300 96 396 1.7E-111 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 523 1.4E-229 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 Gene3D G3DSA:2.40.30.20 3 93 1.3E-34 T 20-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 SUPERFAMILY SSF50615 11 95 3.4E-26 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 PIRSF PIRSF039088 2 526 9.9E-235 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 Gene3D G3DSA:1.20.150.20 397 522 1.4E-45 T 20-04-2016 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 396 519 9.9E-44 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 151 389 3.8E-70 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 525 47.922 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 SUPERFAMILY SSF52540 97 395 6.02E-89 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 380 389 - T 20-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 PANTHER PTHR15184:SF3 334 509 1.6E-278 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 PANTHER PTHR15184:SF3 1 315 1.6E-278 T 20-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 PANTHER PTHR15184 334 509 1.6E-278 T 20-04-2016 APS56_RS10660 60603005a4ce20b8f09ed498d3b2ecf3 526 PANTHER PTHR15184 1 315 1.6E-278 T 20-04-2016 APS56_RS06725 22690d698b6426ba78815fa29aa437ec 323 Gene3D G3DSA:3.40.630.10 25 294 3.2E-49 T 20-04-2016 APS56_RS06725 22690d698b6426ba78815fa29aa437ec 323 PANTHER PTHR12147:SF16 85 315 5.4E-30 T 20-04-2016 APS56_RS06725 22690d698b6426ba78815fa29aa437ec 323 Pfam PF04389 Peptidase family M28 99 293 3.0E-33 T 20-04-2016 IPR007484 Peptidase M28 APS56_RS06725 22690d698b6426ba78815fa29aa437ec 323 SUPERFAMILY SSF53187 34 299 1.07E-53 T 20-04-2016 APS56_RS06725 22690d698b6426ba78815fa29aa437ec 323 PANTHER PTHR12147 85 315 5.4E-30 T 20-04-2016 APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 7 169 4.6E-27 T 20-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 169 17.644 T 20-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 SUPERFAMILY SSF50346 100 169 3.92E-15 T 20-04-2016 IPR011033 PRC-barrel-like APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 Gene3D G3DSA:2.40.30.60 2 94 1.4E-10 T 20-04-2016 IPR002676 RimM protein GO:0006364 APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 Pfam PF01782 RimM N-terminal domain 9 88 2.6E-9 T 20-04-2016 IPR002676 RimM protein GO:0006364 APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 Pfam PF05239 PRC-barrel domain 98 169 1.6E-4 T 20-04-2016 IPR027275 PRC-barrel domain APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 SUPERFAMILY SSF50447 5 94 4.59E-15 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 Gene3D G3DSA:2.30.30.240 100 169 3.9E-13 T 20-04-2016 APS56_RS12540 17c5fc1f651d6ff8320f64e22b7c090f 174 PANTHER PTHR33692 1 172 3.1E-25 T 20-04-2016 APS56_RS10765 eda3b1766e132c9e32c51428a589abe6 364 Pfam PF13439 Glycosyltransferase Family 4 16 176 3.4E-20 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS10765 eda3b1766e132c9e32c51428a589abe6 364 Gene3D G3DSA:3.40.50.2000 188 300 7.1E-18 T 20-04-2016 APS56_RS10765 eda3b1766e132c9e32c51428a589abe6 364 PANTHER PTHR12526 1 68 9.5E-42 T 20-04-2016 APS56_RS10765 eda3b1766e132c9e32c51428a589abe6 364 PANTHER PTHR12526 85 362 9.5E-42 T 20-04-2016 APS56_RS10765 eda3b1766e132c9e32c51428a589abe6 364 Pfam PF00534 Glycosyl transferases group 1 192 305 6.2E-24 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS10765 eda3b1766e132c9e32c51428a589abe6 364 SUPERFAMILY SSF53756 1 362 6.8E-65 T 20-04-2016 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 349 44.035 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 PANTHER PTHR30307 2 349 1.7E-151 T 20-04-2016 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 Pfam PF02547 Queuosine biosynthesis protein 4 348 1.1E-137 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 SUPERFAMILY SSF111337 1 349 9.16E-129 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 Gene3D G3DSA:2.40.10.240 64 143 1.3E-21 T 20-04-2016 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 349 1.3E-122 T 20-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 Gene3D G3DSA:3.40.1780.10 186 349 3.2E-98 T 20-04-2016 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 Gene3D G3DSA:3.40.1780.10 1 62 3.2E-98 T 20-04-2016 APS56_RS07270 dceb76998eaa25294bec3341c1298576 349 PANTHER PTHR30307:SF0 2 349 1.7E-151 T 20-04-2016 APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.3E-13 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 Gene3D G3DSA:1.10.260.40 8 58 1.2E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 Gene3D G3DSA:3.40.50.2300 59 178 4.4E-42 T 20-04-2016 APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 SMART SM00354 6 76 5.2E-22 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 SUPERFAMILY SSF53822 66 339 7.46E-71 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 Gene3D G3DSA:3.40.50.2300 179 317 2.3E-45 T 20-04-2016 APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 SUPERFAMILY SSF47413 5 65 2.41E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 Pfam PF13377 Periplasmic binding protein-like domain 175 338 4.4E-35 T 20-04-2016 APS56_RS00535 c970e2240f01148174e54188af1e9b64 342 PANTHER PTHR30146 6 338 3.8E-107 T 20-04-2016 APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 Gene3D G3DSA:3.40.50.1100 178 397 2.5E-79 T 20-04-2016 APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 SUPERFAMILY SSF53686 10 395 1.06E-130 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 PANTHER PTHR10314:SF3 14 401 3.9E-175 T 20-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 Gene3D G3DSA:3.40.50.1100 105 177 1.3E-14 T 20-04-2016 APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 395 6.2E-157 T 20-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 PIRSF PIRSF001413 1 399 6.1E-154 T 20-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 20-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 397 47.347 T 20-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 61 384 1.0E-44 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS12435 669c010b29283bf7fc4f4a7d58e95095 401 PANTHER PTHR10314 14 401 3.9E-175 T 20-04-2016 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 SUPERFAMILY SSF118116 433 616 6.8E-42 T 20-04-2016 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 Gene3D G3DSA:3.30.230.10 205 326 4.0E-35 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 3 616 23.177 T 20-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 210 326 1.9E-35 T 20-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 SUPERFAMILY SSF55874 5 207 1.44E-47 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 SUPERFAMILY SSF54211 193 327 1.59E-32 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 PANTHER PTHR10073 5 594 1.0E-130 T 20-04-2016 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 Pfam PF08676 MutL C terminal dimerisation domain 436 576 4.0E-27 T 20-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 95 101 - T 20-04-2016 IPR014762 DNA mismatch repair, conserved site APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 SMART SM01340 209 327 1.1E-48 T 20-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 SMART SM00853 434 576 1.3E-26 T 20-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 140 1.1E-10 T 20-04-2016 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 5 306 1.8E-91 T 20-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APS56_RS14450 918a8d248a8ef6d8217376817da33417 617 Gene3D G3DSA:3.30.565.10 5 204 2.1E-68 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS11950 6696d9811614e90d65379b7fed06ed03 239 TIGRFAM TIGR01769 GGGP: phosphoglycerol geranylgeranyltransferase 21 226 1.9E-52 T 20-04-2016 IPR010946 Geranylgeranylglyceryl phosphate synthase GO:0000287|GO:0005737|GO:0006650|GO:0047294 KEGG: 00564+2.5.1.41|MetaCyc: PWY-6349|UniPathway: UPA00940 APS56_RS11950 6696d9811614e90d65379b7fed06ed03 239 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 1 239 61.589 T 20-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 APS56_RS11950 6696d9811614e90d65379b7fed06ed03 239 Gene3D G3DSA:3.20.20.390 12 233 2.4E-61 T 20-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 APS56_RS11950 6696d9811614e90d65379b7fed06ed03 239 PANTHER PTHR21235:SF22 46 230 8.8E-47 T 20-04-2016 APS56_RS11950 6696d9811614e90d65379b7fed06ed03 239 Pfam PF01884 PcrB family 19 233 2.1E-40 T 20-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 APS56_RS11950 6696d9811614e90d65379b7fed06ed03 239 SUPERFAMILY SSF51395 14 234 1.25E-30 T 20-04-2016 APS56_RS11950 6696d9811614e90d65379b7fed06ed03 239 PANTHER PTHR21235 46 230 8.8E-47 T 20-04-2016 APS56_RS11950 6696d9811614e90d65379b7fed06ed03 239 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 21 233 2.6E-51 T 20-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 Pfam PF12838 4Fe-4S dicluster domain 9 91 2.3E-7 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 PANTHER PTHR24960:SF38 64 110 9.6E-15 T 20-04-2016 APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 PANTHER PTHR24960:SF38 1 44 9.6E-15 T 20-04-2016 APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 PANTHER PTHR24960 64 110 9.6E-15 T 20-04-2016 APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 PANTHER PTHR24960 1 44 9.6E-15 T 20-04-2016 APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 Gene3D G3DSA:3.30.70.20 63 109 3.7E-15 T 20-04-2016 APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 Gene3D G3DSA:3.30.70.20 3 28 3.7E-15 T 20-04-2016 APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 SUPERFAMILY SSF54862 64 101 1.5E-14 T 20-04-2016 APS56_RS12460 a054673ed0a5fd620d559307c1867dd0 116 SUPERFAMILY SSF54862 4 29 1.5E-14 T 20-04-2016 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 393 6.1E-129 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 SUPERFAMILY SSF53901 271 394 1.0E-37 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 20-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 PANTHER PTHR18919:SF87 1 396 2.8E-173 T 20-04-2016 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 Gene3D G3DSA:3.40.47.10 277 393 1.1E-58 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 Gene3D G3DSA:3.40.47.10 147 185 1.1E-58 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.0E-64 T 20-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 Gene3D G3DSA:3.40.47.10 4 126 3.0E-59 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 Gene3D G3DSA:3.40.47.10 186 275 3.0E-59 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 20-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 PANTHER PTHR18919 1 396 2.8E-173 T 20-04-2016 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 PIRSF PIRSF000429 1 396 9.1E-122 T 20-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 SUPERFAMILY SSF53901 1 268 2.76E-67 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS07800 dc9d1e5f8c56956754e4c93b26017275 396 Pfam PF02803 Thiolase, C-terminal domain 271 393 3.7E-43 T 20-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APS56_RS04445 3b73ae45efd3c50b662dc7b11e2f7f3d 302 Gene3D G3DSA:3.40.50.720 1 244 5.8E-21 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS04445 3b73ae45efd3c50b662dc7b11e2f7f3d 302 SUPERFAMILY SSF51735 1 298 6.8E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS04445 3b73ae45efd3c50b662dc7b11e2f7f3d 302 PANTHER PTHR11092:SF0 1 300 4.0E-88 T 20-04-2016 APS56_RS04445 3b73ae45efd3c50b662dc7b11e2f7f3d 302 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 4.1E-83 T 20-04-2016 IPR010099 Epimerase family protein SDR39U1 APS56_RS04445 3b73ae45efd3c50b662dc7b11e2f7f3d 302 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.6E-13 T 20-04-2016 IPR013549 Domain of unknown function DUF1731 APS56_RS04445 3b73ae45efd3c50b662dc7b11e2f7f3d 302 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 126 3.0E-10 T 20-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APS56_RS04445 3b73ae45efd3c50b662dc7b11e2f7f3d 302 PANTHER PTHR11092 1 300 4.0E-88 T 20-04-2016 IPR010099 Epimerase family protein SDR39U1 APS56_RS11365 cdb02f4e5f99e956a3ae9a51b4e35dc6 918 Gene3D G3DSA:3.40.50.300 253 350 8.0E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11365 cdb02f4e5f99e956a3ae9a51b4e35dc6 918 Gene3D G3DSA:3.40.50.300 504 602 8.0E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11365 cdb02f4e5f99e956a3ae9a51b4e35dc6 918 Pfam PF12705 PD-(D/E)XK nuclease superfamily 644 913 5.2E-25 T 20-04-2016 APS56_RS11365 cdb02f4e5f99e956a3ae9a51b4e35dc6 918 SUPERFAMILY SSF52540 264 662 1.46E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11365 cdb02f4e5f99e956a3ae9a51b4e35dc6 918 SUPERFAMILY SSF52980 645 849 9.65E-7 T 20-04-2016 IPR011335 Restriction endonuclease type II-like APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 Pfam PF01712 Deoxynucleoside kinase 182 370 3.3E-42 T 20-04-2016 IPR031314 Deoxynucleoside kinase domain APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 9 136 3.3E-29 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 PANTHER PTHR10513 135 373 6.7E-47 T 20-04-2016 APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 SUPERFAMILY SSF52540 181 374 3.09E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 PANTHER PTHR10513:SF16 135 373 6.7E-47 T 20-04-2016 APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 Gene3D G3DSA:3.30.70.560 6 158 1.9E-42 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 9 136 7.1E-32 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 SUPERFAMILY SSF55083 6 159 2.62E-40 T 20-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APS56_RS13215 4cb946aa34ab9f5447f0660cdb64c17b 376 Gene3D G3DSA:3.40.50.300 181 373 1.8E-48 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13055 ba4f90e422f2e067cf784dfe353d370d 233 PANTHER PTHR24220:SF86 3 227 2.6E-111 T 20-04-2016 APS56_RS13055 ba4f90e422f2e067cf784dfe353d370d 233 Pfam PF00005 ABC transporter 21 169 2.7E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS13055 ba4f90e422f2e067cf784dfe353d370d 233 SUPERFAMILY SSF52540 1 228 1.6E-75 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13055 ba4f90e422f2e067cf784dfe353d370d 233 Gene3D G3DSA:3.40.50.300 1 230 2.2E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13055 ba4f90e422f2e067cf784dfe353d370d 233 SMART SM00382 30 216 5.2E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS13055 ba4f90e422f2e067cf784dfe353d370d 233 PANTHER PTHR24220 3 227 2.6E-111 T 20-04-2016 APS56_RS06240 59ec3bf16b223af211929a1b8dc08fe0 459 SUPERFAMILY SSF48452 18 459 2.02E-101 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06240 59ec3bf16b223af211929a1b8dc08fe0 459 Pfam PF07980 SusD family 312 459 4.1E-35 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS06240 59ec3bf16b223af211929a1b8dc08fe0 459 Pfam PF14322 Starch-binding associating with outer membrane 39 218 5.0E-21 T 20-04-2016 APS56_RS06240 59ec3bf16b223af211929a1b8dc08fe0 459 Gene3D G3DSA:1.25.40.10 197 402 6.6E-33 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10715 373ef6ea4ab6de4f4e4f8dca7e4a4b14 219 PANTHER PTHR10285 28 205 5.6E-47 T 20-04-2016 APS56_RS10715 373ef6ea4ab6de4f4e4f8dca7e4a4b14 219 Pfam PF14681 Uracil phosphoribosyltransferase 9 214 8.6E-40 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS10715 373ef6ea4ab6de4f4e4f8dca7e4a4b14 219 SUPERFAMILY SSF53271 9 214 2.76E-48 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS10715 373ef6ea4ab6de4f4e4f8dca7e4a4b14 219 PANTHER PTHR10285:SF46 28 205 5.6E-47 T 20-04-2016 APS56_RS10715 373ef6ea4ab6de4f4e4f8dca7e4a4b14 219 Gene3D G3DSA:3.40.50.2020 8 214 3.3E-51 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 SUPERFAMILY SSF54106 148 192 7.46E-7 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 SUPERFAMILY SSF54106 26 69 8.11E-8 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 SUPERFAMILY SSF53822 317 586 3.23E-12 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Pfam PF01476 LysM domain 27 69 8.9E-7 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Pfam PF01476 LysM domain 224 252 0.14 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Pfam PF01476 LysM domain 150 192 0.0083 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Pfam PF01476 LysM domain 95 133 3.7E-4 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Pfam PF01094 Receptor family ligand binding region 331 453 1.1E-6 T 20-04-2016 IPR001828 Receptor, ligand binding region APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Gene3D G3DSA:3.10.350.10 147 192 1.7E-8 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Gene3D G3DSA:3.10.350.10 87 133 1.3E-8 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Gene3D G3DSA:3.40.50.2300 318 447 5.5E-8 T 20-04-2016 APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 SUPERFAMILY SSF54106 88 133 1.83E-6 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 SMART SM00257 26 69 2.9E-7 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 SMART SM00257 208 252 0.0078 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 SMART SM00257 149 192 0.0011 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 SMART SM00257 89 133 3.2E-4 T 20-04-2016 IPR018392 LysM domain APS56_RS04410 b40d57d978f3671641aa227296071a1b 643 Gene3D G3DSA:3.10.350.10 26 69 2.1E-11 T 20-04-2016 IPR018392 LysM domain APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 Gene3D G3DSA:3.40.50.1370 145 291 1.4E-45 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 150 3.0E-34 T 20-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 136 153 1.5E-30 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 261 266 1.5E-30 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 1.5E-30 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 43 65 1.5E-30 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 1.5E-30 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 1.5E-30 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 303 4.8E-24 T 20-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PANTHER PTHR11405:SF16 7 309 4.9E-132 T 20-04-2016 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 SUPERFAMILY SSF53671 3 306 2.1E-92 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 Gene3D G3DSA:3.40.50.1370 4 144 2.1E-46 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 303 4.6E-95 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PANTHER PTHR11405 7 309 4.9E-132 T 20-04-2016 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 6 306 38.854 T 20-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 137 148 9.9E-21 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 9.9E-21 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 9.9E-21 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS01655 636f014ad67f9d0d956a007442e1623c 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 266 9.9E-21 T 20-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APS56_RS08375 1c9ec052d75574cb58b821aaa5f26705 911 Gene3D G3DSA:2.170.130.10 129 201 2.6E-5 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS08375 1c9ec052d75574cb58b821aaa5f26705 911 Pfam PF13715 CarboxypepD_reg-like domain 23 109 1.1E-10 T 20-04-2016 APS56_RS08375 1c9ec052d75574cb58b821aaa5f26705 911 SUPERFAMILY SSF49464 22 123 9.16E-11 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS08375 1c9ec052d75574cb58b821aaa5f26705 911 Gene3D G3DSA:2.60.40.1120 22 108 7.4E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS08375 1c9ec052d75574cb58b821aaa5f26705 911 SUPERFAMILY SSF56935 281 366 1.17E-20 T 20-04-2016 APS56_RS08375 1c9ec052d75574cb58b821aaa5f26705 911 SUPERFAMILY SSF56935 125 241 1.17E-20 T 20-04-2016 APS56_RS08375 1c9ec052d75574cb58b821aaa5f26705 911 SUPERFAMILY SSF56935 759 910 1.17E-20 T 20-04-2016 APS56_RS08375 1c9ec052d75574cb58b821aaa5f26705 911 SUPERFAMILY SSF56935 421 706 1.17E-20 T 20-04-2016 APS56_RS14180 fb4d50122063c091c51bb91011c9bb91 272 Pfam PF12146 Serine aminopeptidase, S33 68 213 9.1E-13 T 20-04-2016 IPR022742 Serine aminopeptidase, S33 APS56_RS14180 fb4d50122063c091c51bb91011c9bb91 272 Gene3D G3DSA:3.40.50.1820 61 270 4.2E-27 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS14180 fb4d50122063c091c51bb91011c9bb91 272 SUPERFAMILY SSF53474 56 259 7.79E-28 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS14180 fb4d50122063c091c51bb91011c9bb91 272 PANTHER PTHR10992:SF701 52 272 3.9E-17 T 20-04-2016 APS56_RS14180 fb4d50122063c091c51bb91011c9bb91 272 PANTHER PTHR10992 52 272 3.9E-17 T 20-04-2016 APS56_RS11850 58f067037d324f26d92375189a3d526e 611 SUPERFAMILY SSF52540 357 606 2.23E-74 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11850 58f067037d324f26d92375189a3d526e 611 Gene3D G3DSA:1.20.1560.10 29 344 7.5E-21 T 20-04-2016 APS56_RS11850 58f067037d324f26d92375189a3d526e 611 PANTHER PTHR24221 50 610 1.7E-163 T 20-04-2016 APS56_RS11850 58f067037d324f26d92375189a3d526e 611 Gene3D G3DSA:3.40.50.300 366 599 7.4E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11850 58f067037d324f26d92375189a3d526e 611 ProSitePatterns PS00211 ABC transporters family signature. 508 522 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS11850 58f067037d324f26d92375189a3d526e 611 Pfam PF00005 ABC transporter 382 536 1.3E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS11850 58f067037d324f26d92375189a3d526e 611 SMART SM00382 391 576 6.2E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS11850 58f067037d324f26d92375189a3d526e 611 SUPERFAMILY SSF90123 28 329 4.71E-28 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS11850 58f067037d324f26d92375189a3d526e 611 SUPERFAMILY SSF90123 512 520 4.71E-28 T 20-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APS56_RS11850 58f067037d324f26d92375189a3d526e 611 PANTHER PTHR24221:SF157 50 610 1.7E-163 T 20-04-2016 APS56_RS09835 892959fbee1e7d37256f027a02942357 605 Pfam PF14322 Starch-binding associating with outer membrane 6 202 8.1E-25 T 20-04-2016 APS56_RS09835 892959fbee1e7d37256f027a02942357 605 SUPERFAMILY SSF48452 567 604 2.91E-88 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09835 892959fbee1e7d37256f027a02942357 605 SUPERFAMILY SSF48452 2 510 2.91E-88 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09835 892959fbee1e7d37256f027a02942357 605 Pfam PF07980 SusD family 288 604 1.3E-30 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS09835 892959fbee1e7d37256f027a02942357 605 Gene3D G3DSA:1.25.40.10 185 300 2.3E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09835 892959fbee1e7d37256f027a02942357 605 Gene3D G3DSA:1.25.40.10 378 483 2.3E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10055 46685d570bf2f52ef2a68402eb82ba61 284 Gene3D G3DSA:3.40.50.1820 56 279 4.5E-51 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS10055 46685d570bf2f52ef2a68402eb82ba61 284 Pfam PF07859 alpha/beta hydrolase fold 83 196 1.8E-8 T 20-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APS56_RS10055 46685d570bf2f52ef2a68402eb82ba61 284 SUPERFAMILY SSF53474 62 277 4.84E-28 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS10055 46685d570bf2f52ef2a68402eb82ba61 284 PANTHER PTHR23024 62 280 1.7E-44 T 20-04-2016 APS56_RS10055 46685d570bf2f52ef2a68402eb82ba61 284 PANTHER PTHR23024:SF41 62 280 1.7E-44 T 20-04-2016 APS56_RS04225 b2b6111f2b8c4145fae68f0566ce1d68 170 Gene3D G3DSA:3.10.290.30 1 166 3.4E-35 T 20-04-2016 IPR024047 Protein MM3350-like domain APS56_RS04225 b2b6111f2b8c4145fae68f0566ce1d68 170 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 2 132 1.2E-20 T 20-04-2016 IPR012912 Plasmid pRiA4b, Orf3 APS56_RS04225 b2b6111f2b8c4145fae68f0566ce1d68 170 SUPERFAMILY SSF159941 1 170 1.96E-42 T 20-04-2016 IPR024047 Protein MM3350-like domain APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 Gene3D G3DSA:3.30.360.10 129 252 8.7E-37 T 20-04-2016 APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 Gene3D G3DSA:3.30.360.10 285 329 8.7E-37 T 20-04-2016 APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 PANTHER PTHR22604:SF120 1 331 2.7E-62 T 20-04-2016 APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 129 210 4.4E-9 T 20-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 SUPERFAMILY SSF55347 128 257 2.45E-31 T 20-04-2016 APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 117 1.1E-18 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 SUPERFAMILY SSF51735 3 158 1.51E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 Gene3D G3DSA:3.40.50.720 1 128 3.7E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00715 65b7ef755bb0ed37b836a046d3f36b5e 331 PANTHER PTHR22604 1 331 2.7E-62 T 20-04-2016 APS56_RS04625 a73b700cd5727db87e240650931df675 489 Gene3D G3DSA:3.30.1120.10 404 485 3.4E-16 T 20-04-2016 APS56_RS04625 a73b700cd5727db87e240650931df675 489 PANTHER PTHR10342:SF238 20 480 2.4E-120 T 20-04-2016 APS56_RS04625 a73b700cd5727db87e240650931df675 489 SUPERFAMILY SSF53649 20 470 7.98E-102 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS04625 a73b700cd5727db87e240650931df675 489 Pfam PF00884 Sulfatase 22 374 2.0E-55 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS04625 a73b700cd5727db87e240650931df675 489 PANTHER PTHR10342 20 480 2.4E-120 T 20-04-2016 APS56_RS04625 a73b700cd5727db87e240650931df675 489 Gene3D G3DSA:3.40.720.10 22 393 1.0E-88 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06175 d927894e6df3706d1474384874301367 1055 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 211 241 3.6E-17 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532:SF57 863 1053 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532:SF57 571 847 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532:SF57 416 463 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532:SF57 514 544 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532:SF57 202 392 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532:SF57 1 185 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 SUPERFAMILY SSF56935 963 1052 2.75E-73 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 SUPERFAMILY SSF56935 883 926 2.75E-73 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 SUPERFAMILY SSF56935 440 783 2.75E-73 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 SUPERFAMILY SSF56935 314 402 2.75E-73 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 SUPERFAMILY SSF56935 90 261 2.75E-73 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532 863 1053 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532 571 847 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532 416 463 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532 514 544 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532 202 392 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 PANTHER PTHR11532 1 185 1.2E-216 T 20-04-2016 APS56_RS06175 d927894e6df3706d1474384874301367 1055 Gene3D G3DSA:2.60.40.1120 10 100 1.5E-10 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS06175 d927894e6df3706d1474384874301367 1055 SUPERFAMILY SSF49464 9 92 1.29E-12 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS06175 d927894e6df3706d1474384874301367 1055 Pfam PF07715 TonB-dependent Receptor Plug Domain 111 235 5.8E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06175 d927894e6df3706d1474384874301367 1055 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 10 1055 7.0E-221 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS06175 d927894e6df3706d1474384874301367 1055 Gene3D G3DSA:2.40.170.20 238 257 6.2E-42 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06175 d927894e6df3706d1474384874301367 1055 Gene3D G3DSA:2.40.170.20 891 936 6.2E-42 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06175 d927894e6df3706d1474384874301367 1055 Gene3D G3DSA:2.40.170.20 973 1055 6.2E-42 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06175 d927894e6df3706d1474384874301367 1055 Gene3D G3DSA:2.40.170.20 323 800 6.2E-42 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06175 d927894e6df3706d1474384874301367 1055 Gene3D G3DSA:2.170.130.10 111 237 1.2E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06175 d927894e6df3706d1474384874301367 1055 Pfam PF13715 CarboxypepD_reg-like domain 10 96 2.4E-13 T 20-04-2016 APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 225 237 1.8E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 195 209 1.8E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 209 225 1.8E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 Pfam PF00196 Bacterial regulatory proteins, luxR family 194 248 8.4E-15 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 SUPERFAMILY SSF46894 191 249 3.4E-15 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 Gene3D G3DSA:3.30.450.20 39 163 2.3E-13 T 20-04-2016 APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 Pfam PF08447 PAS fold 55 148 3.2E-7 T 20-04-2016 IPR013655 PAS fold-3 GO:0005515 APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 Gene3D G3DSA:1.10.10.10 194 248 6.5E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06765 93a74d37c6613e68c1459d17fc1370c5 256 SMART SM00421 192 249 1.6E-13 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS04555 2efc3c72df2ab0b76c3a22a36507c90a 480 SUPERFAMILY SSF53649 21 465 1.01E-113 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS04555 2efc3c72df2ab0b76c3a22a36507c90a 480 Pfam PF16347 Domain of unknown function (DUF4976) 375 464 3.0E-7 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS04555 2efc3c72df2ab0b76c3a22a36507c90a 480 Gene3D G3DSA:3.40.720.10 19 389 5.7E-98 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS04555 2efc3c72df2ab0b76c3a22a36507c90a 480 PANTHER PTHR10342 1 464 1.5E-130 T 20-04-2016 APS56_RS04555 2efc3c72df2ab0b76c3a22a36507c90a 480 PANTHER PTHR10342:SF207 1 464 1.5E-130 T 20-04-2016 APS56_RS04555 2efc3c72df2ab0b76c3a22a36507c90a 480 Pfam PF00884 Sulfatase 22 369 3.6E-57 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS04555 2efc3c72df2ab0b76c3a22a36507c90a 480 Gene3D G3DSA:3.30.1120.10 407 467 1.1E-12 T 20-04-2016 APS56_RS16185 1eac980c0af22d7fd8e058aa949301ec 345 Gene3D G3DSA:3.40.50.1100 6 46 3.1E-67 T 20-04-2016 APS56_RS16185 1eac980c0af22d7fd8e058aa949301ec 345 Gene3D G3DSA:3.40.50.1100 157 328 3.1E-67 T 20-04-2016 APS56_RS16185 1eac980c0af22d7fd8e058aa949301ec 345 PANTHER PTHR10314:SF8 1 340 1.8E-125 T 20-04-2016 APS56_RS16185 1eac980c0af22d7fd8e058aa949301ec 345 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 13 310 1.9E-70 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS16185 1eac980c0af22d7fd8e058aa949301ec 345 Gene3D G3DSA:3.40.50.1100 47 151 1.4E-32 T 20-04-2016 APS56_RS16185 1eac980c0af22d7fd8e058aa949301ec 345 PANTHER PTHR10314 1 340 1.8E-125 T 20-04-2016 APS56_RS16185 1eac980c0af22d7fd8e058aa949301ec 345 SUPERFAMILY SSF53686 7 331 1.05E-91 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 PANTHER PTHR11019 1 297 4.9E-45 T 20-04-2016 APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 PANTHER PTHR11019:SF80 1 297 4.9E-45 T 20-04-2016 APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 Pfam PF12833 Helix-turn-helix domain 219 297 1.1E-16 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 SMART SM00342 213 296 2.1E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 SUPERFAMILY SSF46689 252 297 9.41E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 280 296 1.7E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 280 1.7E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 Gene3D G3DSA:1.10.10.60 253 298 2.9E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 Gene3D G3DSA:2.60.120.10 219 224 2.8E-4 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS14565 0405db68977f9f0249cd7e7e5c5b0cd4 302 Gene3D G3DSA:2.60.120.10 53 110 2.8E-4 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 PANTHER PTHR11532:SF57 480 1083 1.8E-244 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 PANTHER PTHR11532:SF57 6 379 1.8E-244 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Pfam PF07715 TonB-dependent Receptor Plug Domain 122 228 7.6E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Pfam PF13715 CarboxypepD_reg-like domain 30 111 8.0E-22 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 PANTHER PTHR11532 480 1083 1.8E-244 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 PANTHER PTHR11532 6 379 1.8E-244 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 29 1085 7.4E-253 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Gene3D G3DSA:2.40.170.20 987 1085 2.7E-67 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Gene3D G3DSA:2.40.170.20 434 792 2.7E-67 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Gene3D G3DSA:2.40.170.20 894 919 2.7E-67 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Gene3D G3DSA:2.40.170.20 232 248 2.7E-67 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Gene3D G3DSA:2.40.170.20 321 400 2.7E-67 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 204 234 6.8E-16 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Gene3D G3DSA:2.60.40.1120 30 116 1.5E-13 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 SUPERFAMILY SSF56935 108 252 4.4E-81 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 SUPERFAMILY SSF56935 439 787 4.4E-81 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 SUPERFAMILY SSF56935 885 929 4.4E-81 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 SUPERFAMILY SSF56935 993 1085 4.4E-81 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 SUPERFAMILY SSF56935 312 400 4.4E-81 T 20-04-2016 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 Gene3D G3DSA:2.170.130.10 122 231 2.0E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS12715 dd2fd04ce7091042e3b454b3c70e478d 1085 SUPERFAMILY SSF49464 29 110 4.45E-20 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS04970 e95940c4b968a9d237051ad4227cb093 274 PANTHER PTHR20941:SF1 8 269 7.4E-114 T 20-04-2016 APS56_RS04970 e95940c4b968a9d237051ad4227cb093 274 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 270 7.7E-96 T 20-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 APS56_RS04970 e95940c4b968a9d237051ad4227cb093 274 Gene3D G3DSA:3.20.20.20 13 272 2.0E-99 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APS56_RS04970 e95940c4b968a9d237051ad4227cb093 274 SUPERFAMILY SSF51717 3 272 7.46E-93 T 20-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APS56_RS04970 e95940c4b968a9d237051ad4227cb093 274 PANTHER PTHR20941 8 269 7.4E-114 T 20-04-2016 APS56_RS04970 e95940c4b968a9d237051ad4227cb093 274 Pfam PF00809 Pterin binding enzyme 18 257 5.5E-76 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APS56_RS04970 e95940c4b968a9d237051ad4227cb093 274 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Gene3D G3DSA:3.50.40.10 214 406 4.1E-82 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 802 41.701 T 20-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Pfam PF03147 Ferredoxin-fold anticodon binding domain 715 808 5.0E-30 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Gene3D G3DSA:3.30.70.380 717 808 6.0E-30 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 SUPERFAMILY SSF54991 710 808 1.06E-31 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 SMART SM00896 715 808 7.1E-41 T 20-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 808 3.5E-257 T 20-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 SMART SM00873 226 399 1.1E-86 T 20-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 SUPERFAMILY SSF46955 417 489 3.2E-15 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 PANTHER PTHR10947:SF0 2 808 7.4E-258 T 20-04-2016 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 PANTHER PTHR10947 2 808 7.4E-258 T 20-04-2016 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Pfam PF03484 tRNA synthetase B5 domain 419 485 6.3E-18 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 SUPERFAMILY SSF55681 481 701 3.63E-31 T 20-04-2016 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Pfam PF01588 Putative tRNA binding domain 48 152 5.6E-24 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 SUPERFAMILY SSF56037 215 406 2.88E-70 T 20-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Gene3D G3DSA:2.40.50.140 45 159 1.5E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Gene3D G3DSA:3.30.56.10 1 38 5.3E-22 T 20-04-2016 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Gene3D G3DSA:3.30.56.10 163 191 5.3E-22 T 20-04-2016 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 SUPERFAMILY SSF50249 43 202 9.55E-42 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Gene3D G3DSA:3.30.930.10 506 702 2.2E-42 T 20-04-2016 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Pfam PF03483 B3/4 domain 227 399 1.8E-65 T 20-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 SMART SM00874 416 485 1.4E-21 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APS56_RS01095 e51fab54876babd0b1b79cdf53940747 808 Gene3D G3DSA:3.30.56.20 417 489 2.5E-22 T 20-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APS56_RS05630 0333d235e7095e416c180685211533fb 339 SUPERFAMILY SSF51735 111 252 3.64E-34 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05630 0333d235e7095e416c180685211533fb 339 Pfam PF02080 TrkA-C domain 279 335 5.5E-10 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS05630 0333d235e7095e416c180685211533fb 339 PANTHER PTHR16254:SF21 1 274 2.6E-77 T 20-04-2016 APS56_RS05630 0333d235e7095e416c180685211533fb 339 Pfam PF02254 TrkA-N domain 115 230 2.5E-29 T 20-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APS56_RS05630 0333d235e7095e416c180685211533fb 339 Gene3D G3DSA:3.40.50.720 112 252 1.1E-37 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05630 0333d235e7095e416c180685211533fb 339 SUPERFAMILY SSF81324 7 126 7.85E-25 T 20-04-2016 APS56_RS05630 0333d235e7095e416c180685211533fb 339 Pfam PF07885 Ion channel 18 90 1.3E-13 T 20-04-2016 IPR013099 Potassium channel domain APS56_RS05630 0333d235e7095e416c180685211533fb 339 Gene3D G3DSA:3.30.70.1450 264 334 5.3E-12 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS05630 0333d235e7095e416c180685211533fb 339 SUPERFAMILY SSF116726 279 335 8.24E-10 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS05630 0333d235e7095e416c180685211533fb 339 PANTHER PTHR16254 1 274 2.6E-77 T 20-04-2016 APS56_RS05630 0333d235e7095e416c180685211533fb 339 Gene3D G3DSA:1.10.287.70 11 94 4.2E-18 T 20-04-2016 APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SUPERFAMILY SSF51126 270 367 1.35E-36 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SUPERFAMILY SSF51126 8 112 1.35E-36 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SUPERFAMILY SSF51126 418 652 1.35E-36 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SMART SM00710 533 566 6500.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SMART SM00710 346 368 320.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SMART SM00710 401 428 7300.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SMART SM00710 429 451 27.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SMART SM00710 322 343 2100.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS06075 01b33a59998239e086fbddb19d132820 788 Pfam PF13229 Right handed beta helix region 270 366 2.7E-5 T 20-04-2016 APS56_RS06075 01b33a59998239e086fbddb19d132820 788 Gene3D G3DSA:2.160.20.10 419 660 5.3E-26 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS06075 01b33a59998239e086fbddb19d132820 788 Gene3D G3DSA:2.160.20.10 312 366 5.3E-26 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS06075 01b33a59998239e086fbddb19d132820 788 Gene3D G3DSA:2.160.20.10 24 137 5.3E-26 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS06075 01b33a59998239e086fbddb19d132820 788 PANTHER PTHR36453 396 668 5.7E-22 T 20-04-2016 APS56_RS06075 01b33a59998239e086fbddb19d132820 788 PANTHER PTHR36453 4 377 5.7E-22 T 20-04-2016 APS56_RS06075 01b33a59998239e086fbddb19d132820 788 PANTHER PTHR36453:SF1 396 668 5.7E-22 T 20-04-2016 APS56_RS06075 01b33a59998239e086fbddb19d132820 788 PANTHER PTHR36453:SF1 4 377 5.7E-22 T 20-04-2016 APS56_RS06075 01b33a59998239e086fbddb19d132820 788 SUPERFAMILY SSF50156 719 786 1.97E-10 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS06075 01b33a59998239e086fbddb19d132820 788 Gene3D G3DSA:2.30.42.10 706 785 2.5E-12 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS12190 6299eb052529d351a81279c60751a099 384 SMART SM00388 174 233 7.7E-4 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12190 6299eb052529d351a81279c60751a099 384 Gene3D G3DSA:3.30.565.10 221 380 1.3E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12190 6299eb052529d351a81279c60751a099 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 341 359 9.4E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12190 6299eb052529d351a81279c60751a099 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 340 9.4E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12190 6299eb052529d351a81279c60751a099 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 326 9.4E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12190 6299eb052529d351a81279c60751a099 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 380 9.4E-13 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS12190 6299eb052529d351a81279c60751a099 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 283 380 2.5E-19 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12190 6299eb052529d351a81279c60751a099 384 SUPERFAMILY SSF55874 237 380 6.81E-29 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS12190 6299eb052529d351a81279c60751a099 384 Gene3D G3DSA:1.10.287.130 171 220 4.4E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12190 6299eb052529d351a81279c60751a099 384 PANTHER PTHR24423 172 381 1.8E-36 T 20-04-2016 APS56_RS12190 6299eb052529d351a81279c60751a099 384 SUPERFAMILY SSF47384 166 227 1.84E-5 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS12190 6299eb052529d351a81279c60751a099 384 SMART SM00387 275 383 3.4E-19 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS03030 3cd92f293e7c7324758ccdcdc3a1cdf6 506 SUPERFAMILY SSF53649 41 491 8.14E-110 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS03030 3cd92f293e7c7324758ccdcdc3a1cdf6 506 PANTHER PTHR10342 171 492 2.6E-99 T 20-04-2016 APS56_RS03030 3cd92f293e7c7324758ccdcdc3a1cdf6 506 PANTHER PTHR10342 11 152 2.6E-99 T 20-04-2016 APS56_RS03030 3cd92f293e7c7324758ccdcdc3a1cdf6 506 Pfam PF16347 Domain of unknown function (DUF4976) 383 488 9.3E-15 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS03030 3cd92f293e7c7324758ccdcdc3a1cdf6 506 Gene3D G3DSA:3.30.1120.10 423 492 5.1E-13 T 20-04-2016 APS56_RS03030 3cd92f293e7c7324758ccdcdc3a1cdf6 506 ProSitePatterns PS00523 Sulfatases signature 1. 92 104 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS03030 3cd92f293e7c7324758ccdcdc3a1cdf6 506 Pfam PF00884 Sulfatase 42 380 2.5E-57 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS03030 3cd92f293e7c7324758ccdcdc3a1cdf6 506 Gene3D G3DSA:3.40.720.10 41 399 1.5E-93 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 Gene3D G3DSA:3.40.1030.10 73 329 2.2E-82 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 SUPERFAMILY SSF47648 1 68 6.93E-13 T 20-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 PANTHER PTHR11922 9 29 9.4E-84 T 20-04-2016 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 PANTHER PTHR11922 65 330 9.4E-84 T 20-04-2016 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 62 4.3E-11 T 20-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 Pfam PF00591 Glycosyl transferase family, a/b domain 73 318 2.1E-67 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 SUPERFAMILY SSF52418 71 327 6.54E-75 T 20-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 PANTHER PTHR11922:SF5 9 29 9.4E-84 T 20-04-2016 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 PANTHER PTHR11922:SF5 65 330 9.4E-84 T 20-04-2016 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 328 30.287 T 20-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 Gene3D G3DSA:1.20.970.10 1 63 2.2E-14 T 20-04-2016 APS56_RS14950 075426d2913f7b44e3f4fb755bb0f965 330 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 327 4.8E-94 T 20-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APS56_RS02610 0c504ca5f85fee666612057eab4cab9d 245 PANTHER PTHR11019:SF126 5 244 5.0E-16 T 20-04-2016 APS56_RS02610 0c504ca5f85fee666612057eab4cab9d 245 Pfam PF12833 Helix-turn-helix domain 168 244 1.8E-19 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS02610 0c504ca5f85fee666612057eab4cab9d 245 SMART SM00342 160 245 2.8E-15 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS02610 0c504ca5f85fee666612057eab4cab9d 245 Gene3D G3DSA:1.10.10.60 199 244 1.3E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02610 0c504ca5f85fee666612057eab4cab9d 245 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 242 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS02610 0c504ca5f85fee666612057eab4cab9d 245 Gene3D G3DSA:1.10.10.60 147 198 1.2E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02610 0c504ca5f85fee666612057eab4cab9d 245 SUPERFAMILY SSF46689 197 244 8.96E-7 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02610 0c504ca5f85fee666612057eab4cab9d 245 PANTHER PTHR11019 5 244 5.0E-16 T 20-04-2016 APS56_RS12600 fb79542565805f1e32db2a125d0da8cd 443 Pfam PF02321 Outer membrane efflux protein 32 222 7.5E-32 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS12600 fb79542565805f1e32db2a125d0da8cd 443 Pfam PF02321 Outer membrane efflux protein 251 432 1.7E-29 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS12600 fb79542565805f1e32db2a125d0da8cd 443 SUPERFAMILY SSF56954 3 438 1.7E-81 T 20-04-2016 APS56_RS12600 fb79542565805f1e32db2a125d0da8cd 443 PANTHER PTHR30026:SF4 30 439 5.8E-60 T 20-04-2016 APS56_RS12600 fb79542565805f1e32db2a125d0da8cd 443 PANTHER PTHR30026 30 439 5.8E-60 T 20-04-2016 APS56_RS12600 fb79542565805f1e32db2a125d0da8cd 443 Gene3D G3DSA:1.20.1600.10 30 437 1.3E-76 T 20-04-2016 APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 124 358 3.4E-28 T 20-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 PANTHER PTHR11061:SF15 18 401 9.2E-85 T 20-04-2016 APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 Gene3D G3DSA:2.30.130.10 18 80 1.8E-12 T 20-04-2016 IPR015947 PUA-like domain APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 SUPERFAMILY SSF88697 17 81 5.66E-9 T 20-04-2016 IPR015947 PUA-like domain APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 Gene3D G3DSA:3.40.50.150 201 402 1.5E-49 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 SUPERFAMILY SSF53335 94 402 4.11E-61 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 PANTHER PTHR11061 18 401 9.2E-85 T 20-04-2016 APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 Gene3D G3DSA:3.30.750.80 88 193 7.1E-23 T 20-04-2016 APS56_RS16240 48ba1b0155b73087503b09df1cbae2da 409 SMART SM00359 16 103 5.0E-7 T 20-04-2016 IPR002478 PUA domain GO:0003723 APS56_RS15725 bb4f8fdb73b88169aa149f9a786d3820 493 SUPERFAMILY SSF48452 20 488 1.18E-58 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15725 bb4f8fdb73b88169aa149f9a786d3820 493 Pfam PF14322 Starch-binding associating with outer membrane 24 217 2.1E-17 T 20-04-2016 APS56_RS15725 bb4f8fdb73b88169aa149f9a786d3820 493 Pfam PF07980 SusD family 263 461 5.5E-14 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS15725 bb4f8fdb73b88169aa149f9a786d3820 493 Gene3D G3DSA:1.25.40.10 238 446 3.7E-23 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 Pfam PF01979 Amidohydrolase family 54 429 6.3E-25 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 ProSitePatterns PS00483 Dihydroorotase signature 2. 311 322 - T 20-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 19 432 4.1E-90 T 20-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 SUPERFAMILY SSF51556 58 376 5.57E-95 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 PANTHER PTHR11647:SF1 6 436 8.7E-146 T 20-04-2016 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 SUPERFAMILY SSF51338 5 57 5.89E-34 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 SUPERFAMILY SSF51338 375 436 5.89E-34 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 Gene3D G3DSA:2.30.40.10 6 72 1.4E-25 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 Gene3D G3DSA:3.20.20.140 73 415 2.4E-107 T 20-04-2016 APS56_RS12335 b5f1dc506d225057fb1cf2496b92b750 448 PANTHER PTHR11647 6 436 8.7E-146 T 20-04-2016 APS56_RS13305 8546d8df826963b000079829832ef597 282 PANTHER PTHR11017 10 32 3.0E-12 T 20-04-2016 APS56_RS13305 8546d8df826963b000079829832ef597 282 PANTHER PTHR11017 95 188 3.0E-12 T 20-04-2016 APS56_RS13305 8546d8df826963b000079829832ef597 282 Pfam PF13306 Leucine rich repeats (6 copies) 91 188 4.7E-20 T 20-04-2016 IPR026906 Leucine rich repeat 5 APS56_RS13305 8546d8df826963b000079829832ef597 282 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 218 282 1.1E-9 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS03115 605ace32e48cb99febc55dc1fd202874 258 Gene3D G3DSA:3.30.70.660 112 257 4.1E-27 T 20-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS03115 605ace32e48cb99febc55dc1fd202874 258 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 4 257 22.58 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS03115 605ace32e48cb99febc55dc1fd202874 258 PIRSF PIRSF001430 3 258 1.2E-46 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS03115 605ace32e48cb99febc55dc1fd202874 258 SUPERFAMILY SSF55120 2 257 1.44E-48 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS03115 605ace32e48cb99febc55dc1fd202874 258 Gene3D G3DSA:3.30.70.580 4 104 1.9E-18 T 20-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS03115 605ace32e48cb99febc55dc1fd202874 258 PANTHER PTHR11142 1 257 1.1E-47 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS03115 605ace32e48cb99febc55dc1fd202874 258 Pfam PF01416 tRNA pseudouridine synthase 148 257 5.4E-15 T 20-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Pfam PF07715 TonB-dependent Receptor Plug Domain 208 315 6.3E-23 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 PANTHER PTHR11532:SF57 535 1065 3.5E-236 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 PANTHER PTHR11532:SF57 118 438 3.5E-236 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 SUPERFAMILY SSF49464 118 198 3.4E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 PANTHER PTHR11532 535 1065 3.5E-236 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 PANTHER PTHR11532 118 438 3.5E-236 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 SUPERFAMILY SSF56935 196 339 3.63E-98 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 SUPERFAMILY SSF56935 981 1067 3.63E-98 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 SUPERFAMILY SSF56935 907 951 3.63E-98 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 SUPERFAMILY SSF56935 384 472 3.63E-98 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 SUPERFAMILY SSF56935 501 839 3.63E-98 T 20-04-2016 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 291 321 2.5E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Gene3D G3DSA:2.60.40.1120 119 203 9.7E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Pfam PF00593 TonB dependent receptor 674 1065 2.8E-24 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 118 1067 3.3E-253 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Gene3D G3DSA:2.170.130.10 204 315 3.2E-20 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Gene3D G3DSA:2.40.170.20 393 852 2.4E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Gene3D G3DSA:2.40.170.20 976 1067 2.4E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Gene3D G3DSA:2.40.170.20 316 339 2.4E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Gene3D G3DSA:2.40.170.20 916 941 2.4E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09640 69a6c293ac6ac6eec02bdaa7cfc0aa00 1067 Pfam PF13715 CarboxypepD_reg-like domain 119 200 4.8E-17 T 20-04-2016 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 PANTHER PTHR10196 2 485 2.8E-112 T 20-04-2016 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 SUPERFAMILY SSF53067 252 492 6.47E-32 T 20-04-2016 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 PANTHER PTHR10196:SF67 2 485 2.8E-112 T 20-04-2016 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 PIRSF PIRSF000538 1 491 1.6E-91 T 20-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 Gene3D G3DSA:3.30.420.40 252 488 2.6E-28 T 20-04-2016 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 245 4.4E-53 T 20-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 446 6.5E-10 T 20-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 Gene3D G3DSA:3.30.420.40 2 245 1.9E-57 T 20-04-2016 APS56_RS12385 c0760e1a778fa87a870cbec095d04f8f 494 SUPERFAMILY SSF53067 2 251 2.34E-60 T 20-04-2016 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 Gene3D G3DSA:1.10.560.10 3 188 6.7E-45 T 20-04-2016 IPR027413 GroEL-like equatorial domain APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 SUPERFAMILY SSF54849 140 203 2.75E-20 T 20-04-2016 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 527 7.7E-258 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 SUPERFAMILY SSF52029 184 376 2.69E-86 T 20-04-2016 IPR027409 GroEL-like apical domain APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 Gene3D G3DSA:3.50.7.10 189 365 1.1E-102 T 20-04-2016 IPR027409 GroEL-like apical domain APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 SUPERFAMILY SSF48592 6 133 1.25E-75 T 20-04-2016 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 SUPERFAMILY SSF48592 406 520 1.25E-75 T 20-04-2016 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 Hamap MF_00600 60 kDa chaperonin [groL]. 1 541 41.813 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 20-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 PRINTS PR00298 60kDa chaperonin signature 350 375 1.5E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 PRINTS PR00298 60kDa chaperonin signature 398 419 1.5E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 PRINTS PR00298 60kDa chaperonin signature 26 52 1.5E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 PRINTS PR00298 60kDa chaperonin signature 82 109 1.5E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 PRINTS PR00298 60kDa chaperonin signature 268 291 1.5E-74 T 20-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 Gene3D G3DSA:1.10.560.10 366 518 1.1E-40 T 20-04-2016 IPR027413 GroEL-like equatorial domain APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 523 4.2E-97 T 20-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APS56_RS07240 fb6351ef8b4b2d6eabd24dbd0f5dae2d 542 PANTHER PTHR11353 1 541 2.6E-248 T 20-04-2016 APS56_RS11015 8a773ce8be8e30aa7e11cd81c10486da 120 TIGRFAM TIGR00526 folB_dom: FolB domain 2 119 7.3E-17 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APS56_RS11015 8a773ce8be8e30aa7e11cd81c10486da 120 Gene3D G3DSA:3.30.1130.10 2 118 3.6E-30 T 20-04-2016 APS56_RS11015 8a773ce8be8e30aa7e11cd81c10486da 120 SUPERFAMILY SSF55620 2 116 4.39E-24 T 20-04-2016 APS56_RS11015 8a773ce8be8e30aa7e11cd81c10486da 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 4.2E-27 T 20-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APS56_RS11015 8a773ce8be8e30aa7e11cd81c10486da 120 PANTHER PTHR20941 1 119 7.0E-13 T 20-04-2016 APS56_RS11015 8a773ce8be8e30aa7e11cd81c10486da 120 PANTHER PTHR20941:SF3 1 119 7.0E-13 T 20-04-2016 APS56_RS11015 8a773ce8be8e30aa7e11cd81c10486da 120 SMART SM00905 4 116 4.5E-30 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APS56_RS11015 8a773ce8be8e30aa7e11cd81c10486da 120 Pfam PF02152 Dihydroneopterin aldolase 4 114 4.2E-25 T 20-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APS56_RS10605 ddfbad6697b99b4a1f26e01529fd3d5f 319 SUPERFAMILY SSF110997 241 313 2.22E-11 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 APS56_RS10605 ddfbad6697b99b4a1f26e01529fd3d5f 319 Pfam PF05036 Sporulation related domain 242 312 2.5E-7 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 APS56_RS10605 ddfbad6697b99b4a1f26e01529fd3d5f 319 Gene3D G3DSA:3.30.70.1070 240 308 5.7E-8 T 20-04-2016 IPR007730 Sporulation-related domain GO:0042834 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PANTHER PTHR11686 4 573 2.2E-199 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 SUPERFAMILY SSF56235 37 573 5.98E-179 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 Pfam PF01019 Gamma-glutamyltranspeptidase 59 567 8.5E-167 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PANTHER PTHR11686:SF9 4 573 2.2E-199 T 20-04-2016 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 45 565 2.0E-169 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 157 176 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 252 268 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 406 424 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 66 91 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 139 157 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 382 400 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 447 462 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 282 301 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS08960 e3a1bf2f4a62e021e5411ea3377ddc67 573 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 471 488 8.4E-71 T 20-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APS56_RS02460 69dc67fba87df91bc84da15c837e8ff6 397 PIRSF PIRSF000390 7 396 8.8E-83 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS02460 69dc67fba87df91bc84da15c837e8ff6 397 PANTHER PTHR30244 349 396 2.3E-96 T 20-04-2016 APS56_RS02460 69dc67fba87df91bc84da15c837e8ff6 397 PANTHER PTHR30244 40 332 2.3E-96 T 20-04-2016 APS56_RS02460 69dc67fba87df91bc84da15c837e8ff6 397 SUPERFAMILY SSF53383 2 374 3.42E-85 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS02460 69dc67fba87df91bc84da15c837e8ff6 397 PANTHER PTHR30244:SF13 349 396 2.3E-96 T 20-04-2016 APS56_RS02460 69dc67fba87df91bc84da15c837e8ff6 397 PANTHER PTHR30244:SF13 40 332 2.3E-96 T 20-04-2016 APS56_RS02460 69dc67fba87df91bc84da15c837e8ff6 397 Gene3D G3DSA:3.40.640.10 9 249 3.8E-74 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS02460 69dc67fba87df91bc84da15c837e8ff6 397 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 11 349 3.1E-84 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS08990 26490e3eb7df64708722adc5f3fddc0a 193 PANTHER PTHR14136 2 174 2.5E-17 T 20-04-2016 APS56_RS08990 26490e3eb7df64708722adc5f3fddc0a 193 Pfam PF00805 Pentapeptide repeats (8 copies) 33 57 0.006 T 20-04-2016 IPR001646 Pentapeptide repeat APS56_RS08990 26490e3eb7df64708722adc5f3fddc0a 193 PANTHER PTHR14136:SF12 2 174 2.5E-17 T 20-04-2016 APS56_RS08990 26490e3eb7df64708722adc5f3fddc0a 193 SUPERFAMILY SSF141571 11 189 5.1E-41 T 20-04-2016 APS56_RS08990 26490e3eb7df64708722adc5f3fddc0a 193 Pfam PF13599 Pentapeptide repeats (9 copies) 109 174 5.2E-10 T 20-04-2016 IPR001646 Pentapeptide repeat APS56_RS10515 f35782b0323ebf502c7d787ef3f4b0ac 383 PANTHER PTHR22935:SF2 91 352 9.7E-33 T 20-04-2016 APS56_RS10515 f35782b0323ebf502c7d787ef3f4b0ac 383 SUPERFAMILY SSF56601 4 359 6.83E-72 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS10515 f35782b0323ebf502c7d787ef3f4b0ac 383 Gene3D G3DSA:3.40.710.10 91 360 1.7E-42 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS10515 f35782b0323ebf502c7d787ef3f4b0ac 383 Pfam PF00144 Beta-lactamase 91 362 1.1E-31 T 20-04-2016 IPR001466 Beta-lactamase-related APS56_RS10515 f35782b0323ebf502c7d787ef3f4b0ac 383 PANTHER PTHR22935 91 352 9.7E-33 T 20-04-2016 APS56_RS06430 b4d47341831d19514ff64f0aa4c038a5 246 SUPERFAMILY SSF81901 140 240 1.94E-10 T 20-04-2016 APS56_RS06430 b4d47341831d19514ff64f0aa4c038a5 246 Gene3D G3DSA:1.25.40.10 142 231 3.9E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14455 16ced6da6c2a025fbc8fc59198d7195e 248 SUPERFAMILY SSF144091 153 244 2.22E-40 T 20-04-2016 APS56_RS14455 16ced6da6c2a025fbc8fc59198d7195e 248 SUPERFAMILY SSF144091 4 111 2.22E-40 T 20-04-2016 APS56_RS14455 16ced6da6c2a025fbc8fc59198d7195e 248 PANTHER PTHR22936 11 109 4.9E-26 T 20-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APS56_RS14455 16ced6da6c2a025fbc8fc59198d7195e 248 PANTHER PTHR22936 149 236 4.9E-26 T 20-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APS56_RS14455 16ced6da6c2a025fbc8fc59198d7195e 248 Gene3D G3DSA:1.20.1540.10 153 239 1.4E-42 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS14455 16ced6da6c2a025fbc8fc59198d7195e 248 Gene3D G3DSA:1.20.1540.10 7 111 1.4E-42 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS14455 16ced6da6c2a025fbc8fc59198d7195e 248 Pfam PF01694 Rhomboid family 43 239 9.4E-31 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS14625 a597571a48c3ed3a088d211f7786a8a5 287 SUPERFAMILY SSF49299 22 92 2.62E-9 T 20-04-2016 IPR000601 PKD domain APS56_RS14625 a597571a48c3ed3a088d211f7786a8a5 287 Gene3D G3DSA:2.60.40.670 19 91 5.1E-12 T 20-04-2016 IPR000601 PKD domain APS56_RS14625 a597571a48c3ed3a088d211f7786a8a5 287 SMART SM00089 19 95 0.0044 T 20-04-2016 IPR022409 PKD/Chitinase domain APS56_RS11180 85bf442f651b3f3f93711cdc7e43ab68 67 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 57 17.113 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APS56_RS11180 85bf442f651b3f3f93711cdc7e43ab68 67 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 53 1.9E-16 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APS56_RS11180 85bf442f651b3f3f93711cdc7e43ab68 67 Pfam PF01783 Ribosomal L32p protein family 2 57 1.7E-21 T 20-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APS56_RS11180 85bf442f651b3f3f93711cdc7e43ab68 67 SUPERFAMILY SSF57829 1 57 3.48E-17 T 20-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 PANTHER PTHR23359 4 190 2.4E-70 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 SUPERFAMILY SSF52540 3 189 3.64E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 Hamap MF_00235 Adenylate kinase [adk]. 2 188 42.575 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 PRINTS PR00094 Adenylate kinase signature 33 47 7.8E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 PRINTS PR00094 Adenylate kinase signature 5 18 7.8E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 PRINTS PR00094 Adenylate kinase signature 152 166 7.8E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 PRINTS PR00094 Adenylate kinase signature 82 98 7.8E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 PRINTS PR00094 Adenylate kinase signature 135 150 7.8E-24 T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 Gene3D G3DSA:3.40.50.300 3 186 5.5E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 ProSitePatterns PS00113 Adenylate kinase signature. 82 93 - T 20-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APS56_RS06555 5550dbe3aea485d1ca4a935759af26b7 190 Pfam PF00406 Adenylate kinase 6 165 1.7E-51 T 20-04-2016 APS56_RS10760 49cd02367941fe36a001d75b23b24d18 358 PANTHER PTHR11228:SF7 4 284 1.8E-34 T 20-04-2016 APS56_RS10760 49cd02367941fe36a001d75b23b24d18 358 PANTHER PTHR11228 4 284 1.8E-34 T 20-04-2016 APS56_RS10760 49cd02367941fe36a001d75b23b24d18 358 Pfam PF04055 Radical SAM superfamily 12 150 2.2E-10 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS10760 49cd02367941fe36a001d75b23b24d18 358 Pfam PF13186 Iron-sulfur cluster-binding domain 236 299 7.9E-9 T 20-04-2016 IPR023885 4Fe4S-binding SPASM domain APS56_RS10760 49cd02367941fe36a001d75b23b24d18 358 SUPERFAMILY SSF102114 7 298 1.96E-42 T 20-04-2016 APS56_RS10760 49cd02367941fe36a001d75b23b24d18 358 Gene3D G3DSA:3.20.20.70 7 300 4.3E-43 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 SUPERFAMILY SSF100950 21 280 3.77E-87 T 20-04-2016 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 Gene3D G3DSA:3.40.50.1360 21 282 1.7E-95 T 20-04-2016 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 Gene3D G3DSA:3.40.50.10320 444 642 4.7E-56 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 Gene3D G3DSA:3.40.50.10320 360 400 4.7E-56 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 PANTHER PTHR11280:SF7 3 338 0.0 T 20-04-2016 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 PANTHER PTHR11280:SF7 363 642 0.0 T 20-04-2016 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 144 162 - T 20-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 SUPERFAMILY SSF102588 445 632 9.02E-34 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 SUPERFAMILY SSF102588 360 400 9.02E-34 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 26 252 1.9E-21 T 20-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 PANTHER PTHR11280 3 338 0.0 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 PANTHER PTHR11280 363 642 0.0 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 25 266 1.8E-74 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APS56_RS13690 4d707150ab896514593bd550ae4a308f 642 Pfam PF02585 GlcNAc-PI de-N-acetylase 364 540 1.7E-16 T 20-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APS56_RS09925 aeecbf65d6c21bc6523cb646f925b14f 374 Gene3D G3DSA:3.40.720.10 13 73 7.5E-6 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09925 aeecbf65d6c21bc6523cb646f925b14f 374 SUPERFAMILY SSF53649 33 328 1.55E-27 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09925 aeecbf65d6c21bc6523cb646f925b14f 374 Gene3D G3DSA:3.40.720.10 183 302 3.3E-18 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09925 aeecbf65d6c21bc6523cb646f925b14f 374 Pfam PF00884 Sulfatase 195 283 7.6E-11 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09925 aeecbf65d6c21bc6523cb646f925b14f 374 PANTHER PTHR10342 200 306 7.6E-12 T 20-04-2016 APS56_RS11870 e8ef462403d703b4a51d4c02a6f23830 515 Pfam PF10150 Ribonuclease E/G family 143 413 1.9E-98 T 20-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APS56_RS11870 e8ef462403d703b4a51d4c02a6f23830 515 Gene3D G3DSA:2.40.50.140 34 147 6.4E-21 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS11870 e8ef462403d703b4a51d4c02a6f23830 515 SUPERFAMILY SSF50249 39 147 7.95E-13 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS11870 e8ef462403d703b4a51d4c02a6f23830 515 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 15 419 2.0E-122 T 20-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APS56_RS11870 e8ef462403d703b4a51d4c02a6f23830 515 PANTHER PTHR30001:SF0 1 417 8.7E-143 T 20-04-2016 APS56_RS11870 e8ef462403d703b4a51d4c02a6f23830 515 PANTHER PTHR30001 1 417 8.7E-143 T 20-04-2016 APS56_RS05040 7317c672af1ca4df77df8922314def26 151 PANTHER PTHR10516 50 151 4.9E-22 T 20-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APS56_RS05040 7317c672af1ca4df77df8922314def26 151 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 65 149 1.3E-19 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APS56_RS05040 7317c672af1ca4df77df8922314def26 151 Gene3D G3DSA:3.10.50.40 28 150 6.9E-37 T 20-04-2016 APS56_RS05040 7317c672af1ca4df77df8922314def26 151 SUPERFAMILY SSF54534 41 150 3.14E-32 T 20-04-2016 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 PANTHER PTHR11019:SF50 50 303 7.8E-33 T 20-04-2016 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 PANTHER PTHR11019 50 303 7.8E-33 T 20-04-2016 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 SMART SM00342 214 297 1.6E-22 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 Gene3D G3DSA:1.10.10.60 215 248 3.2E-5 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 SUPERFAMILY SSF46689 252 298 9.86E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 5.0E-7 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 5.0E-7 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 Gene3D G3DSA:1.10.10.60 252 298 3.6E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09360 c32eef9870243be0c2ea12d25af59cee 303 Pfam PF12833 Helix-turn-helix domain 220 298 7.5E-19 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 PANTHER PTHR33406:SF2 1 101 3.8E-61 T 20-04-2016 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 PANTHER PTHR33406:SF2 123 772 3.8E-61 T 20-04-2016 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 Gene3D G3DSA:1.20.1640.10 195 387 9.7E-30 T 20-04-2016 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 Gene3D G3DSA:1.20.1640.10 575 777 5.7E-33 T 20-04-2016 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 SUPERFAMILY SSF82866 567 772 9.02E-34 T 20-04-2016 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 SUPERFAMILY SSF82866 208 381 2.49E-27 T 20-04-2016 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 PRINTS PR00702 Acriflavin resistance protein family signature 225 248 1.4E-5 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 PRINTS PR00702 Acriflavin resistance protein family signature 252 273 1.4E-5 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 PRINTS PR00702 Acriflavin resistance protein family signature 355 378 1.4E-5 T 20-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 Pfam PF03176 MMPL family 158 399 1.1E-14 T 20-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 Pfam PF03176 MMPL family 535 773 2.6E-19 T 20-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 PANTHER PTHR33406 1 101 3.8E-61 T 20-04-2016 APS56_RS08155 e67ab35814d23ddb1ba3247ed832e8f9 798 PANTHER PTHR33406 123 772 3.8E-61 T 20-04-2016 APS56_RS00820 d02d5bfcf2cf364fa9ab88c2d84c7d7f 191 SUPERFAMILY SSF88659 132 185 1.51E-10 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00820 d02d5bfcf2cf364fa9ab88c2d84c7d7f 191 Gene3D G3DSA:1.10.1740.10 9 120 5.5E-26 T 20-04-2016 APS56_RS00820 d02d5bfcf2cf364fa9ab88c2d84c7d7f 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 28 183 2.0E-26 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00820 d02d5bfcf2cf364fa9ab88c2d84c7d7f 191 Gene3D G3DSA:1.10.10.10 131 186 6.3E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS00820 d02d5bfcf2cf364fa9ab88c2d84c7d7f 191 Pfam PF08281 Sigma-70, region 4 135 182 1.0E-8 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00820 d02d5bfcf2cf364fa9ab88c2d84c7d7f 191 Pfam PF04542 Sigma-70 region 2 31 97 9.9E-14 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00820 d02d5bfcf2cf364fa9ab88c2d84c7d7f 191 SUPERFAMILY SSF88946 9 110 1.52E-21 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS00820 d02d5bfcf2cf364fa9ab88c2d84c7d7f 191 PANTHER PTHR30173 1 190 7.3E-30 T 20-04-2016 APS56_RS04285 3263e664002b927e98ded2510117ca2f 310 Pfam PF04116 Fatty acid hydroxylase superfamily 98 230 2.5E-23 T 20-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 APS56_RS04285 3263e664002b927e98ded2510117ca2f 310 PANTHER PTHR21624:SF2 1 287 3.8E-66 T 20-04-2016 APS56_RS04285 3263e664002b927e98ded2510117ca2f 310 PANTHER PTHR21624 1 287 3.8E-66 T 20-04-2016 APS56_RS09175 2dce059de5b5bf335fa5cbe22c1d0fd0 144 Pfam PF05425 Copper resistance protein D 44 134 1.3E-10 T 20-04-2016 IPR008457 Copper resistance protein D GO:0016021 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 SMART SM01004 2 328 5.3E-205 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 PANTHER PTHR11458 1 324 8.3E-164 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 PIRSF PIRSF001415 1 329 3.9E-132 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 Pfam PF00490 Delta-aminolevulinic acid dehydratase 5 326 9.5E-135 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 SUPERFAMILY SSF51569 1 328 1.61E-132 T 20-04-2016 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 122 136 4.2E-54 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 272 287 4.2E-54 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 4.2E-54 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 302 321 4.2E-54 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 4.2E-54 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 247 263 4.2E-54 T 20-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 Gene3D G3DSA:3.20.20.70 2 328 2.7E-138 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS10500 b904ab4fce537090c4f20b30bb9d5fde 329 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 247 259 - T 20-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS07355 8876ffae091fdf2888650081dbb300b7 318 PANTHER PTHR21091 177 304 4.2E-36 T 20-04-2016 APS56_RS07355 8876ffae091fdf2888650081dbb300b7 318 SUPERFAMILY SSF51730 4 316 9.22E-84 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like APS56_RS07355 8876ffae091fdf2888650081dbb300b7 318 Pfam PF02219 Methylenetetrahydrofolate reductase 6 316 3.5E-71 T 20-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APS56_RS07355 8876ffae091fdf2888650081dbb300b7 318 Gene3D G3DSA:3.20.20.220 3 317 6.4E-92 T 20-04-2016 IPR029041 FAD-linked oxidoreductase-like APS56_RS07355 8876ffae091fdf2888650081dbb300b7 318 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 16 317 7.1E-94 T 20-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APS56_RS07355 8876ffae091fdf2888650081dbb300b7 318 PANTHER PTHR21091:SF31 177 304 4.2E-36 T 20-04-2016 APS56_RS11615 4d582ae22ee6a08aa2a9753fc88d2815 376 SUPERFAMILY SSF111369 51 280 2.88E-50 T 20-04-2016 APS56_RS11615 4d582ae22ee6a08aa2a9753fc88d2815 376 Gene3D G3DSA:2.40.50.100 157 191 5.1E-21 T 20-04-2016 APS56_RS11615 4d582ae22ee6a08aa2a9753fc88d2815 376 Gene3D G3DSA:2.40.50.100 65 96 5.1E-21 T 20-04-2016 APS56_RS11615 4d582ae22ee6a08aa2a9753fc88d2815 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 271 4.0E-14 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APS56_RS11615 4d582ae22ee6a08aa2a9753fc88d2815 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 358 9.0E-63 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APS56_RS11615 4d582ae22ee6a08aa2a9753fc88d2815 376 PANTHER PTHR30158 6 371 1.2E-84 T 20-04-2016 APS56_RS00435 8e264f0779899e05dd8be0a4c6aaaefc 346 PANTHER PTHR12147 43 335 3.0E-46 T 20-04-2016 APS56_RS00435 8e264f0779899e05dd8be0a4c6aaaefc 346 SUPERFAMILY SSF53187 43 336 2.13E-64 T 20-04-2016 APS56_RS00435 8e264f0779899e05dd8be0a4c6aaaefc 346 Pfam PF04389 Peptidase family M28 117 327 8.8E-43 T 20-04-2016 IPR007484 Peptidase M28 APS56_RS00435 8e264f0779899e05dd8be0a4c6aaaefc 346 ProSitePatterns PS00018 EF-hand calcium-binding domain. 154 166 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS00435 8e264f0779899e05dd8be0a4c6aaaefc 346 Gene3D G3DSA:3.40.630.10 35 337 5.0E-67 T 20-04-2016 APS56_RS15635 56a62814294b489aeeb0c061a2a5f412 105 SUPERFAMILY SSF47226 4 102 1.47E-15 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APS56_RS15635 56a62814294b489aeeb0c061a2a5f412 105 Gene3D G3DSA:1.20.120.160 4 103 2.2E-12 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 20-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 7.9E-17 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 7.9E-17 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 7.9E-17 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 Gene3D G3DSA:1.20.200.10 107 385 8.4E-69 T 20-04-2016 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PANTHER PTHR11444 11 392 1.4E-113 T 20-04-2016 IPR000362 Fumarate lyase family APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 Pfam PF00206 Lyase 25 300 3.5E-55 T 20-04-2016 IPR022761 Fumarate lyase, N-terminal APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 TIGRFAM TIGR00838 argH: argininosuccinate lyase 10 393 3.7E-99 T 20-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 Gene3D G3DSA:1.10.275.10 1 106 1.2E-30 T 20-04-2016 IPR024083 Fumarase/histidase, N-terminal APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PANTHER PTHR11444:SF3 11 392 1.4E-113 T 20-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.6E-34 T 20-04-2016 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PRINTS PR00145 Argininosuccinate lyase family signature 193 209 1.6E-34 T 20-04-2016 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 1.6E-34 T 20-04-2016 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.6E-34 T 20-04-2016 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 1.6E-34 T 20-04-2016 APS56_RS07465 1f93305c7513d4d4434fe6589cd6952a 424 SUPERFAMILY SSF48557 11 392 1.46E-97 T 20-04-2016 IPR008948 L-Aspartase-like GO:0003824 APS56_RS05010 a9a01fa43e8761bfdcb503f3a6248a7b 136 Pfam PF14126 Domain of unknown function (DUF4293) 2 135 2.9E-29 T 20-04-2016 IPR025635 Protein of unknown function DUF4293 APS56_RS10550 90fa53bf4e072e9282f07103be860656 439 Pfam PF04468 PSP1 C-terminal conserved region 115 199 3.5E-24 T 20-04-2016 IPR007557 PSP1, C-terminal APS56_RS10550 90fa53bf4e072e9282f07103be860656 439 PANTHER PTHR21600 51 312 1.6E-55 T 20-04-2016 APS56_RS10550 90fa53bf4e072e9282f07103be860656 439 PANTHER PTHR21600:SF3 51 312 1.6E-55 T 20-04-2016 APS56_RS06230 e2f71c7c3f6cb0d27081ed063eb59a5e 629 SUPERFAMILY SSF51695 48 99 7.85E-6 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS03520 29c183954ecac756eeae2e75f1ae724e 150 SMART SM00357 90 150 2.2E-11 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APS56_RS03520 29c183954ecac756eeae2e75f1ae724e 150 SUPERFAMILY SSF50249 90 149 6.61E-14 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS03520 29c183954ecac756eeae2e75f1ae724e 150 PRINTS PR00050 Cold shock protein signature 91 106 4.4E-5 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS03520 29c183954ecac756eeae2e75f1ae724e 150 PRINTS PR00050 Cold shock protein signature 123 141 4.4E-5 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS03520 29c183954ecac756eeae2e75f1ae724e 150 Pfam PF00313 'Cold-shock' DNA-binding domain 90 149 2.0E-13 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS03520 29c183954ecac756eeae2e75f1ae724e 150 Gene3D G3DSA:2.40.50.140 89 149 1.2E-17 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13320 3e64c461021a342a931dc5ac08a3d4ba 266 Gene3D G3DSA:3.30.360.10 143 243 2.4E-28 T 20-04-2016 APS56_RS13320 3e64c461021a342a931dc5ac08a3d4ba 266 Pfam PF01958 Domain of unknown function DUF108 174 245 8.9E-16 T 20-04-2016 IPR002811 Aspartate dehydrogenase GO:0006742|GO:0016491|GO:0019363|GO:0055114 KEGG: 00760+1.4.1.21|UniPathway: UPA00253 APS56_RS13320 3e64c461021a342a931dc5ac08a3d4ba 266 Gene3D G3DSA:3.40.50.720 6 142 2.8E-23 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13320 3e64c461021a342a931dc5ac08a3d4ba 266 PANTHER PTHR31873 1 215 5.3E-26 T 20-04-2016 APS56_RS13320 3e64c461021a342a931dc5ac08a3d4ba 266 SUPERFAMILY SSF55347 133 234 1.18E-14 T 20-04-2016 APS56_RS13320 3e64c461021a342a931dc5ac08a3d4ba 266 SUPERFAMILY SSF51735 4 144 3.32E-18 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13320 3e64c461021a342a931dc5ac08a3d4ba 266 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 8.6E-11 T 20-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 Pfam PF03717 Penicillin-binding Protein dimerisation domain 37 165 7.0E-10 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 Gene3D G3DSA:3.90.1310.10 138 227 4.6E-16 T 20-04-2016 APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 SUPERFAMILY SSF54184 591 646 4.19E-11 T 20-04-2016 APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 SUPERFAMILY SSF56601 208 566 7.7E-77 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 PANTHER PTHR30627 1 595 9.4E-118 T 20-04-2016 APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 SUPERFAMILY SSF56519 33 219 4.71E-22 T 20-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 Pfam PF00905 Penicillin binding protein transpeptidase domain 246 555 3.0E-56 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 PANTHER PTHR30627:SF1 1 595 9.4E-118 T 20-04-2016 APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 SMART SM00740 590 648 1.5E-5 T 20-04-2016 IPR005543 PASTA domain APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 Gene3D G3DSA:3.40.710.10 228 562 2.8E-79 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS08485 89d3ec00bb901d46bb6d5ade8e48d442 648 Pfam PF03793 PASTA domain 595 646 2.4E-8 T 20-04-2016 IPR005543 PASTA domain APS56_RS09010 a2489bed497a9fb0f719341a38237c7e 153 Gene3D G3DSA:2.170.150.20 19 147 2.0E-55 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APS56_RS09010 a2489bed497a9fb0f719341a38237c7e 153 SUPERFAMILY SSF51316 23 148 1.73E-54 T 20-04-2016 IPR011057 Mss4-like APS56_RS09010 a2489bed497a9fb0f719341a38237c7e 153 Pfam PF01641 SelR domain 28 145 5.9E-50 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APS56_RS09010 a2489bed497a9fb0f719341a38237c7e 153 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 24 143 8.4E-53 T 20-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APS56_RS09010 a2489bed497a9fb0f719341a38237c7e 153 PANTHER PTHR10173 19 143 7.6E-51 T 20-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APS56_RS09010 a2489bed497a9fb0f719341a38237c7e 153 PANTHER PTHR10173:SF18 19 143 7.6E-51 T 20-04-2016 APS56_RS04240 96701f05852b98f5ab29f4f2c92bcbfa 1620 Pfam PF13585 C-terminal domain of CHU protein family 1533 1616 1.1E-12 T 20-04-2016 APS56_RS04240 96701f05852b98f5ab29f4f2c92bcbfa 1620 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1533 1620 3.2E-32 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS11320 4bbde3478f352c6832423d7085b77b04 452 PANTHER PTHR11206:SF94 8 436 8.6E-88 T 20-04-2016 APS56_RS11320 4bbde3478f352c6832423d7085b77b04 452 PIRSF PIRSF006603 2 442 9.1E-58 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS11320 4bbde3478f352c6832423d7085b77b04 452 Pfam PF01554 MatE 255 400 2.3E-18 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS11320 4bbde3478f352c6832423d7085b77b04 452 Pfam PF01554 MatE 16 179 3.3E-23 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS11320 4bbde3478f352c6832423d7085b77b04 452 PANTHER PTHR11206 8 436 8.6E-88 T 20-04-2016 APS56_RS11320 4bbde3478f352c6832423d7085b77b04 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 414 3.0E-72 T 20-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APS56_RS02880 03e8ee0a928d8d0a7fb6dd4543f2a0e6 1468 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 997 1420 1.2E-62 T 20-04-2016 IPR007452 Translocation and assembly module TamB APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 PANTHER PTHR11564 10 317 1.2E-126 T 20-04-2016 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 SMART SM00382 115 295 9.8E-7 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 SUPERFAMILY SSF52540 111 316 4.7E-51 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 Pfam PF00448 SRP54-type protein, GTPase domain 117 316 3.6E-75 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 SUPERFAMILY SSF47364 14 91 4.45E-18 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 290 303 - T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 SMART SM00962 116 317 5.5E-112 T 20-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 40 315 2.8E-108 T 20-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 40 317 58.97 T 20-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 PANTHER PTHR11564:SF16 10 317 1.2E-126 T 20-04-2016 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 Gene3D G3DSA:3.40.50.300 111 316 8.1E-79 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 SMART SM00963 16 97 5.3E-19 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 Pfam PF02881 SRP54-type protein, helical bundle domain 28 93 7.3E-13 T 20-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APS56_RS16565 65b368a9332924553363585c5ca1cc2b 317 Gene3D G3DSA:1.20.120.140 18 101 1.4E-27 T 20-04-2016 APS56_RS05285 6acb314a567ff7e4e34ca65df1dcfe57 224 PANTHER PTHR21485 2 213 1.5E-41 T 20-04-2016 APS56_RS05285 6acb314a567ff7e4e34ca65df1dcfe57 224 Pfam PF02348 Cytidylyltransferase 4 215 1.4E-29 T 20-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APS56_RS05285 6acb314a567ff7e4e34ca65df1dcfe57 224 Gene3D G3DSA:3.90.550.10 2 217 6.4E-55 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05285 6acb314a567ff7e4e34ca65df1dcfe57 224 SUPERFAMILY SSF53448 2 217 1.43E-43 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS15375 301e33fdab25ea91081770ee657c5aab 148 Gene3D G3DSA:1.10.287.110 9 63 7.6E-10 T 20-04-2016 IPR001623 DnaJ domain APS56_RS15375 301e33fdab25ea91081770ee657c5aab 148 SMART SM00271 5 67 0.0061 T 20-04-2016 IPR001623 DnaJ domain APS56_RS15375 301e33fdab25ea91081770ee657c5aab 148 Pfam PF13619 KTSC domain 87 136 2.0E-10 T 20-04-2016 IPR025309 KTSC domain APS56_RS15375 301e33fdab25ea91081770ee657c5aab 148 SUPERFAMILY SSF46565 8 63 5.23E-9 T 20-04-2016 IPR001623 DnaJ domain APS56_RS14405 f64784119bb81f723ea9574e52e90e84 63 SUPERFAMILY SSF50249 1 62 7.5E-19 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14405 f64784119bb81f723ea9574e52e90e84 63 PIRSF PIRSF002599 1 63 6.7E-16 T 20-04-2016 IPR012156 Cold shock, CspA GO:0003676 APS56_RS14405 f64784119bb81f723ea9574e52e90e84 63 PRINTS PR00050 Cold shock protein signature 4 19 2.3E-9 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS14405 f64784119bb81f723ea9574e52e90e84 63 PRINTS PR00050 Cold shock protein signature 36 54 2.3E-9 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS14405 f64784119bb81f723ea9574e52e90e84 63 Gene3D G3DSA:2.40.50.140 1 63 1.5E-22 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14405 f64784119bb81f723ea9574e52e90e84 63 Pfam PF00313 'Cold-shock' DNA-binding domain 3 62 3.8E-18 T 20-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APS56_RS14405 f64784119bb81f723ea9574e52e90e84 63 PANTHER PTHR11544 1 63 1.4E-14 T 20-04-2016 APS56_RS14405 f64784119bb81f723ea9574e52e90e84 63 SMART SM00357 3 63 3.5E-16 T 20-04-2016 IPR011129 Cold shock protein GO:0003676 APS56_RS05345 7e9baa8b8b7d85ca7d15e6a064f412c6 279 SUPERFAMILY SSF53448 2 200 1.88E-41 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05345 7e9baa8b8b7d85ca7d15e6a064f412c6 279 PANTHER PTHR22916 1 246 5.6E-38 T 20-04-2016 APS56_RS05345 7e9baa8b8b7d85ca7d15e6a064f412c6 279 Gene3D G3DSA:3.90.550.10 2 211 5.5E-36 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05345 7e9baa8b8b7d85ca7d15e6a064f412c6 279 Pfam PF00535 Glycosyl transferase family 2 2 94 1.9E-17 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS14650 99d3835336e712140ddcc921977bef9d 324 Gene3D G3DSA:3.40.109.10 4 62 2.6E-23 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APS56_RS14650 99d3835336e712140ddcc921977bef9d 324 Gene3D G3DSA:3.40.109.10 228 322 2.6E-23 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APS56_RS14650 99d3835336e712140ddcc921977bef9d 324 SUPERFAMILY SSF55469 228 322 6.22E-14 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APS56_RS14650 99d3835336e712140ddcc921977bef9d 324 SUPERFAMILY SSF55469 6 58 6.22E-14 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APS56_RS02720 693c5dfabb1f6994055be162ef3136de 93 SUPERFAMILY SSF46955 42 86 9.89E-5 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS02720 693c5dfabb1f6994055be162ef3136de 93 PANTHER PTHR34585 3 86 9.3E-12 T 20-04-2016 APS56_RS14940 901bae6846831c0beb8360a3ccbbc63a 215 PANTHER PTHR22854:SF6 1 208 5.3E-32 T 20-04-2016 APS56_RS14940 901bae6846831c0beb8360a3ccbbc63a 215 PANTHER PTHR22854 1 208 5.3E-32 T 20-04-2016 APS56_RS14940 901bae6846831c0beb8360a3ccbbc63a 215 SUPERFAMILY SSF51366 1 212 3.61E-47 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APS56_RS14940 901bae6846831c0beb8360a3ccbbc63a 215 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 210 1.6E-34 T 20-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APS56_RS14940 901bae6846831c0beb8360a3ccbbc63a 215 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 215 26.962 T 20-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APS56_RS14940 901bae6846831c0beb8360a3ccbbc63a 215 Gene3D G3DSA:3.20.20.70 1 210 1.6E-55 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS09325 ef4551277c35c07297096338c5fc3fd5 155 Pfam PF00571 CBS domain 24 78 1.9E-13 T 20-04-2016 IPR000644 CBS domain APS56_RS09325 ef4551277c35c07297096338c5fc3fd5 155 Pfam PF00571 CBS domain 97 146 7.3E-12 T 20-04-2016 IPR000644 CBS domain APS56_RS09325 ef4551277c35c07297096338c5fc3fd5 155 SMART SM00116 100 147 6.1E-11 T 20-04-2016 IPR000644 CBS domain APS56_RS09325 ef4551277c35c07297096338c5fc3fd5 155 SMART SM00116 31 79 1.9E-7 T 20-04-2016 IPR000644 CBS domain APS56_RS09325 ef4551277c35c07297096338c5fc3fd5 155 Gene3D G3DSA:3.10.580.10 22 145 6.5E-33 T 20-04-2016 APS56_RS09325 ef4551277c35c07297096338c5fc3fd5 155 PANTHER PTHR11911 22 148 1.1E-31 T 20-04-2016 APS56_RS09325 ef4551277c35c07297096338c5fc3fd5 155 SUPERFAMILY SSF54631 14 146 2.51E-34 T 20-04-2016 APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 PRINTS PR01607 Apyrase family signature 210 227 1.3E-19 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 PRINTS PR01607 Apyrase family signature 33 51 1.3E-19 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 PRINTS PR01607 Apyrase family signature 270 290 1.3E-19 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 PRINTS PR01607 Apyrase family signature 237 260 1.3E-19 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 ProSitePatterns PS00785 5'-nucleotidase signature 1. 35 47 - T 20-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 SUPERFAMILY SSF56300 31 303 1.11E-78 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 Pfam PF00149 Calcineurin-like phosphoesterase 36 254 7.1E-19 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 PANTHER PTHR11575 30 303 6.5E-70 T 20-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APS56_RS16355 c46f5a602ea82e6eda6b4ad4431152e2 304 Gene3D G3DSA:3.60.21.10 31 300 3.6E-82 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 50 278 1.3E-57 T 20-04-2016 APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 Gene3D G3DSA:3.40.50.720 36 279 4.9E-78 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PANTHER PTHR24322:SF105 45 173 1.8E-57 T 20-04-2016 APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PANTHER PTHR24322:SF105 189 221 1.8E-57 T 20-04-2016 APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 242 262 3.6E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 227 3.6E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 42 59 3.6E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 179 3.6E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 117 128 3.6E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 208 3.6E-36 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PANTHER PTHR24322 45 173 1.8E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PANTHER PTHR24322 189 221 1.8E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 189 208 5.8E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 117 128 5.8E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 177 5.8E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 SUPERFAMILY SSF51735 39 280 1.09E-76 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00410 0cdb434fbc0e929dbf73165f48d68377 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 176 204 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS01040 1843bb0f5f610521cd69aeeb5ea97f70 124 SUPERFAMILY SSF52172 3 121 1.99E-33 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS01040 1843bb0f5f610521cd69aeeb5ea97f70 124 PANTHER PTHR26402 3 119 1.5E-32 T 20-04-2016 APS56_RS01040 1843bb0f5f610521cd69aeeb5ea97f70 124 Pfam PF00072 Response regulator receiver domain 5 114 1.4E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01040 1843bb0f5f610521cd69aeeb5ea97f70 124 SMART SM00448 3 116 1.4E-30 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01040 1843bb0f5f610521cd69aeeb5ea97f70 124 Gene3D G3DSA:3.40.50.2300 3 122 7.3E-35 T 20-04-2016 APS56_RS13355 00dd073c23612ce8bde75ed89fbd809f 488 SUPERFAMILY SSF52096 374 482 9.94E-34 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS13355 00dd073c23612ce8bde75ed89fbd809f 488 SUPERFAMILY SSF52096 33 124 9.94E-34 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS13355 00dd073c23612ce8bde75ed89fbd809f 488 SUPERFAMILY SSF52096 244 330 9.94E-34 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS13355 00dd073c23612ce8bde75ed89fbd809f 488 Pfam PF03572 Peptidase family S41 252 460 1.4E-20 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS13355 00dd073c23612ce8bde75ed89fbd809f 488 Gene3D G3DSA:3.90.226.10 347 485 9.7E-31 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS13355 00dd073c23612ce8bde75ed89fbd809f 488 Gene3D G3DSA:3.90.226.10 234 314 9.7E-31 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 388 3.7E-176 T 20-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 PANTHER PTHR10314 9 389 1.9E-206 T 20-04-2016 APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 SUPERFAMILY SSF53686 7 391 2.49E-135 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 82 96 - T 20-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 PIRSF PIRSF001413 1 393 4.8E-166 T 20-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 391 49.291 T 20-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 Gene3D G3DSA:3.40.50.1100 175 392 8.9E-80 T 20-04-2016 APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 PANTHER PTHR10314:SF3 9 389 1.9E-206 T 20-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 Gene3D G3DSA:3.40.50.1100 100 174 2.0E-19 T 20-04-2016 APS56_RS14935 5e344c422ff4cf252921262972a5a84c 393 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 55 378 9.1E-50 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS14870 1785015b09a502ef49eb8cb8858c7652 242 PIRSF PIRSF030959 1 240 5.7E-34 T 20-04-2016 IPR014562 Uncharacterised conserved protein UCP030959, divergent TPR repeat-containing APS56_RS14870 1785015b09a502ef49eb8cb8858c7652 242 Pfam PF13181 Tetratricopeptide repeat 87 110 0.0011 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14870 1785015b09a502ef49eb8cb8858c7652 242 Pfam PF13181 Tetratricopeptide repeat 153 177 0.1 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14870 1785015b09a502ef49eb8cb8858c7652 242 SUPERFAMILY SSF48452 83 204 8.67E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14870 1785015b09a502ef49eb8cb8858c7652 242 Gene3D G3DSA:1.25.40.10 87 210 2.4E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14645 a4282cc1ecc35602fbad4cf42456b8e3 204 SUPERFAMILY SSF53335 25 186 1.61E-10 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS14645 a4282cc1ecc35602fbad4cf42456b8e3 204 Gene3D G3DSA:3.40.50.150 13 184 3.4E-10 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS12645 5c28cf9798bcf56a81dc0652ea4a7724 413 SUPERFAMILY SSF81853 103 407 3.14E-79 T 20-04-2016 APS56_RS12645 5c28cf9798bcf56a81dc0652ea4a7724 413 TIGRFAM TIGR02474 pec_lyase: pectate lyase 110 399 5.3E-100 T 20-04-2016 IPR012669 Pectic acid lyase APS56_RS12645 5c28cf9798bcf56a81dc0652ea4a7724 413 Pfam PF09492 Pectic acid lyase 110 400 1.7E-106 T 20-04-2016 IPR012669 Pectic acid lyase APS56_RS12645 5c28cf9798bcf56a81dc0652ea4a7724 413 Gene3D G3DSA:1.50.10.20 102 408 2.4E-112 T 20-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 Pfam PF08502 LeuA allosteric (dimerisation) domain 371 504 1.7E-22 T 20-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 Pfam PF00682 HMGL-like 5 274 9.0E-51 T 20-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 PANTHER PTHR10277 4 505 4.5E-131 T 20-04-2016 APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 SUPERFAMILY SSF110921 391 504 5.75E-14 T 20-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 13 29 - T 20-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 Gene3D G3DSA:3.20.20.70 3 346 1.0E-88 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 SUPERFAMILY SSF51569 3 292 1.07E-64 T 20-04-2016 APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 PANTHER PTHR10277:SF9 4 505 4.5E-131 T 20-04-2016 APS56_RS01905 d1a65bf43b6b436bf0b9af637189dc5f 506 SMART SM00917 347 505 1.2E-13 T 20-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APS56_RS04185 12827bb1321f52c9bb3d794c506e87ea 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 311 3.9E-14 T 20-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APS56_RS04185 12827bb1321f52c9bb3d794c506e87ea 348 PANTHER PTHR30160:SF1 1 301 4.5E-38 T 20-04-2016 APS56_RS04185 12827bb1321f52c9bb3d794c506e87ea 348 PANTHER PTHR30160 1 301 4.5E-38 T 20-04-2016 APS56_RS04185 12827bb1321f52c9bb3d794c506e87ea 348 SUPERFAMILY SSF53756 1 348 2.83E-59 T 20-04-2016 APS56_RS04185 12827bb1321f52c9bb3d794c506e87ea 348 Gene3D G3DSA:3.40.50.2000 165 313 9.8E-16 T 20-04-2016 APS56_RS04185 12827bb1321f52c9bb3d794c506e87ea 348 Gene3D G3DSA:3.40.50.2000 1 149 1.3E-31 T 20-04-2016 APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 16 432 9.2E-147 T 20-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 SUPERFAMILY SSF103473 196 434 2.62E-31 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 SUPERFAMILY SSF103473 2 168 2.62E-31 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 Pfam PF07690 Major Facilitator Superfamily 19 379 4.2E-19 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 Gene3D G3DSA:1.20.1250.20 18 230 8.3E-13 T 20-04-2016 APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 PANTHER PTHR23514 1 177 2.4E-154 T 20-04-2016 APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 PANTHER PTHR23514 198 434 2.4E-154 T 20-04-2016 APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 PANTHER PTHR23514:SF11 1 177 2.4E-154 T 20-04-2016 APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 PANTHER PTHR23514:SF11 198 434 2.4E-154 T 20-04-2016 APS56_RS01025 be34e1d240a5cfb7a73bfeb793b12386 443 Gene3D G3DSA:1.20.1250.20 243 433 0.001 T 20-04-2016 APS56_RS10000 cf6443c5ed78f6c4e904a58579132bb2 285 Pfam PF08340 Domain of unknown function (DUF1732) 201 284 8.8E-30 T 20-04-2016 IPR013551 Domain of unknown function DUF1732 APS56_RS10000 cf6443c5ed78f6c4e904a58579132bb2 285 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 284 2.3E-55 T 20-04-2016 IPR005229 Conserved hypothetical protein CHP00255 APS56_RS10000 cf6443c5ed78f6c4e904a58579132bb2 285 Pfam PF03755 YicC-like family, N-terminal region 2 151 3.5E-37 T 20-04-2016 IPR013527 YicC-like, N-terminal APS56_RS10000 cf6443c5ed78f6c4e904a58579132bb2 285 PANTHER PTHR30636 1 285 5.1E-74 T 20-04-2016 APS56_RS07460 793ef3fe267afbf20cc0ddde96fb6c68 251 SUPERFAMILY SSF53335 98 172 2.36E-6 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS07460 793ef3fe267afbf20cc0ddde96fb6c68 251 Pfam PF13578 Methyltransferase domain 101 152 1.6E-7 T 20-04-2016 APS56_RS12050 eac57ab61a875c00a837ad855e2822c3 269 PANTHER PTHR12526 5 237 7.5E-17 T 20-04-2016 APS56_RS12050 eac57ab61a875c00a837ad855e2822c3 269 PANTHER PTHR12526:SF17 5 237 7.5E-17 T 20-04-2016 APS56_RS12050 eac57ab61a875c00a837ad855e2822c3 269 SUPERFAMILY SSF53756 5 238 1.53E-20 T 20-04-2016 APS56_RS12050 eac57ab61a875c00a837ad855e2822c3 269 Pfam PF08323 Starch synthase catalytic domain 5 235 5.6E-49 T 20-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS12380 4839d2b54827dd7da3dc9ce4382c2857 335 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 83 7.3E-8 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS12380 4839d2b54827dd7da3dc9ce4382c2857 335 Gene3D G3DSA:3.40.50.2300 254 334 2.8E-4 T 20-04-2016 APS56_RS12380 4839d2b54827dd7da3dc9ce4382c2857 335 SUPERFAMILY SSF53822 119 334 2.35E-12 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS12380 4839d2b54827dd7da3dc9ce4382c2857 335 PANTHER PTHR38445 6 287 1.9E-33 T 20-04-2016 APS56_RS12380 4839d2b54827dd7da3dc9ce4382c2857 335 SUPERFAMILY SSF46785 13 85 1.11E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12380 4839d2b54827dd7da3dc9ce4382c2857 335 SMART SM00345 24 83 3.1E-5 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS12380 4839d2b54827dd7da3dc9ce4382c2857 335 Gene3D G3DSA:1.10.10.10 11 84 3.8E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS12380 4839d2b54827dd7da3dc9ce4382c2857 335 PANTHER PTHR38445:SF1 6 287 1.9E-33 T 20-04-2016 APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 SUPERFAMILY SSF102114 310 371 2.9E-11 T 20-04-2016 APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 SUPERFAMILY SSF102114 401 562 2.9E-11 T 20-04-2016 APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 Pfam PF04055 Radical SAM superfamily 312 498 4.8E-10 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 312 332 - T 20-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 Gene3D G3DSA:3.80.30.20 306 552 6.7E-38 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 PANTHER PTHR32331 1 604 4.5E-298 T 20-04-2016 APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 Pfam PF11842 Domain of unknown function (DUF3362) 535 614 1.3E-11 T 20-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 Pfam PF08497 Radical SAM N-terminal 9 311 2.0E-121 T 20-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 SMART SM00729 308 567 1.9E-4 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS13325 88f02fb22d1638c0112784b048ae4fd4 648 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 9 580 8.9E-236 T 20-04-2016 IPR022946 Uncharacterised protein family UPF0313 APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 171 1.4E-41 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 PRINTS PR01576 Peptide deformylase signature 115 133 2.4E-32 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 PRINTS PR01576 Peptide deformylase signature 134 163 2.4E-32 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 PRINTS PR01576 Peptide deformylase signature 32 61 2.4E-32 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 PRINTS PR01576 Peptide deformylase signature 103 114 2.4E-32 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 Pfam PF01327 Polypeptide deformylase 3 166 3.9E-49 T 20-04-2016 IPR023635 Peptide deformylase APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 PANTHER PTHR10458 1 188 2.1E-63 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 PIRSF PIRSF004749 1 188 8.6E-53 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 Gene3D G3DSA:3.90.45.10 3 190 1.6E-61 T 20-04-2016 IPR023635 Peptide deformylase APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 SUPERFAMILY SSF56420 1 180 2.88E-58 T 20-04-2016 IPR023635 Peptide deformylase APS56_RS04165 666e1790ba0fd66e3c8e46f7a2cc351c 196 Hamap MF_00163 Peptide deformylase [def]. 1 176 28.326 T 20-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APS56_RS11275 48232449cc191339548a3ae599ae16f7 192 PANTHER PTHR42160 1 192 1.9E-87 T 20-04-2016 APS56_RS11275 48232449cc191339548a3ae599ae16f7 192 Pfam PF03167 Uracil DNA glycosylase superfamily 29 181 8.7E-26 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APS56_RS11275 48232449cc191339548a3ae599ae16f7 192 Gene3D G3DSA:3.40.470.10 2 189 3.1E-44 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APS56_RS11275 48232449cc191339548a3ae599ae16f7 192 PANTHER PTHR42160:SF1 1 192 1.9E-87 T 20-04-2016 APS56_RS11275 48232449cc191339548a3ae599ae16f7 192 SUPERFAMILY SSF52141 2 188 6.54E-55 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APS56_RS11275 48232449cc191339548a3ae599ae16f7 192 SMART SM00986 25 182 4.6E-25 T 20-04-2016 IPR005122 Uracil-DNA glycosylase-like APS56_RS11275 48232449cc191339548a3ae599ae16f7 192 SMART SM00987 25 182 4.6E-25 T 20-04-2016 APS56_RS15530 dbfd0765e5b3d6eb9b98dfae70ff4dfe 488 PANTHER PTHR10342 3 473 1.3E-149 T 20-04-2016 APS56_RS15530 dbfd0765e5b3d6eb9b98dfae70ff4dfe 488 Pfam PF00884 Sulfatase 39 379 8.6E-75 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS15530 dbfd0765e5b3d6eb9b98dfae70ff4dfe 488 Gene3D G3DSA:3.40.720.10 37 416 3.2E-116 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS15530 dbfd0765e5b3d6eb9b98dfae70ff4dfe 488 Gene3D G3DSA:3.30.1120.10 417 481 1.5E-20 T 20-04-2016 APS56_RS15530 dbfd0765e5b3d6eb9b98dfae70ff4dfe 488 SUPERFAMILY SSF53649 38 474 8.09E-133 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS15530 dbfd0765e5b3d6eb9b98dfae70ff4dfe 488 PANTHER PTHR10342:SF199 3 473 1.3E-149 T 20-04-2016 APS56_RS14875 d72906341126f92cc0322e67f2969535 678 Pfam PF03929 PepSY-associated TM region 11 372 4.1E-45 T 20-04-2016 IPR005625 PepSY-associated TM protein APS56_RS14875 d72906341126f92cc0322e67f2969535 678 PANTHER PTHR34219 1 516 3.0E-44 T 20-04-2016 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 Gene3D G3DSA:3.30.420.40 7 165 4.6E-44 T 20-04-2016 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 6 340 58.67 T 20-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 8 322 3.8E-121 T 20-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 9 315 3.0E-101 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 ProSitePatterns PS01016 Glycoprotease family signature. 99 119 - T 20-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 272 281 1.2E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 9 22 1.2E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 79 99 1.2E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 100 119 1.2E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 160 181 1.2E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 137 149 1.2E-46 T 20-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 Pfam PF00814 Glycoprotease family 27 315 1.7E-95 T 20-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 SUPERFAMILY SSF53067 7 315 9.81E-39 T 20-04-2016 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 PANTHER PTHR11735:SF6 1 340 2.3E-136 T 20-04-2016 APS56_RS02885 f14352ade60d13eed4d587c827564a8e 340 PANTHER PTHR11735 1 340 2.3E-136 T 20-04-2016 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 Pfam PF00145 C-5 cytosine-specific DNA methylase 97 415 3.0E-102 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 PANTHER PTHR10629 96 416 6.5E-58 T 20-04-2016 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 Gene3D G3DSA:3.40.50.150 96 276 4.0E-60 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 99 414 4.8E-99 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 Gene3D G3DSA:3.90.120.10 277 402 4.9E-26 T 20-04-2016 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 PANTHER PTHR10629:SF31 96 416 6.5E-58 T 20-04-2016 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 160 172 - T 20-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 247 260 1.3E-18 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 199 213 1.3E-18 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 98 114 1.3E-18 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APS56_RS01215 0e5ae03d6245b7a4758519306efc5976 421 SUPERFAMILY SSF53335 90 418 6.07E-88 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00290 9fa892754af8c1ebd42752b5b463ab90 243 Pfam PF13649 Methyltransferase domain 49 131 6.0E-12 T 20-04-2016 APS56_RS00290 9fa892754af8c1ebd42752b5b463ab90 243 PANTHER PTHR10108 7 132 7.5E-16 T 20-04-2016 APS56_RS00290 9fa892754af8c1ebd42752b5b463ab90 243 SUPERFAMILY SSF53335 9 233 4.38E-31 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00290 9fa892754af8c1ebd42752b5b463ab90 243 Gene3D G3DSA:3.40.50.150 200 241 1.6E-26 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00290 9fa892754af8c1ebd42752b5b463ab90 243 Gene3D G3DSA:3.40.50.150 7 149 1.6E-26 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS16465 93b8081fe37722eb800ec2d25fa1e286 101 SUPERFAMILY SSF46785 12 100 2.7E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS16465 93b8081fe37722eb800ec2d25fa1e286 101 Gene3D G3DSA:1.10.10.10 12 100 9.5E-22 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS16465 93b8081fe37722eb800ec2d25fa1e286 101 Pfam PF12840 Helix-turn-helix domain 18 73 2.1E-13 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS16465 93b8081fe37722eb800ec2d25fa1e286 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 21 36 1.0E-6 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS16465 93b8081fe37722eb800ec2d25fa1e286 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 54 69 1.0E-6 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS16465 93b8081fe37722eb800ec2d25fa1e286 101 SMART SM00418 19 101 2.0E-15 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS16465 93b8081fe37722eb800ec2d25fa1e286 101 PANTHER PTHR33154 12 74 1.0E-13 T 20-04-2016 APS56_RS03650 eef65a402ffaee528b59072648d5fe61 318 PANTHER PTHR33371 1 302 1.7E-22 T 20-04-2016 APS56_RS03650 eef65a402ffaee528b59072648d5fe61 318 Pfam PF02470 MlaD protein 39 113 8.3E-14 T 20-04-2016 IPR003399 Mce/MlaD APS56_RS03650 eef65a402ffaee528b59072648d5fe61 318 PANTHER PTHR33371:SF4 1 302 1.7E-22 T 20-04-2016 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Pfam PF03144 Elongation factor Tu domain 2 208 274 6.3E-8 T 20-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 TIGRFAM TIGR01393 lepA: elongation factor 4 2 596 2.7E-296 T 20-04-2016 IPR006297 Elongation factor 4 GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Gene3D G3DSA:3.30.70.240 402 490 1.3E-17 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Gene3D G3DSA:3.30.70.870 290 367 1.7E-25 T 20-04-2016 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 SUPERFAMILY SSF50447 164 280 4.71E-27 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 SUPERFAMILY SSF52540 2 201 7.34E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 2.4E-19 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 280.927 T 20-04-2016 IPR006297 Elongation factor 4 GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 SUPERFAMILY SSF54980 400 495 4.03E-21 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Pfam PF00679 Elongation factor G C-terminus 400 486 1.4E-19 T 20-04-2016 IPR000640 Translation elongation factor EFG, V domain APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 SUPERFAMILY SSF54980 291 369 7.91E-19 T 20-04-2016 IPR009022 Elongation factor G, III-V domain APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Gene3D G3DSA:2.40.30.10 192 282 7.1E-21 T 20-04-2016 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Gene3D G3DSA:3.40.50.300 2 191 4.2E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Pfam PF06421 GTP-binding protein LepA C-terminus 489 595 1.4E-50 T 20-04-2016 IPR013842 GTP-binding protein LepA, C-terminal APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PANTHER PTHR23115 398 597 1.5E-271 T 20-04-2016 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PANTHER PTHR23115 2 372 1.5E-271 T 20-04-2016 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PANTHER PTHR23115:SF175 398 597 1.5E-271 T 20-04-2016 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PANTHER PTHR23115:SF175 2 372 1.5E-271 T 20-04-2016 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PRINTS PR00315 GTP-binding elongation factor signature 6 19 7.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PRINTS PR00315 GTP-binding elongation factor signature 73 83 7.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PRINTS PR00315 GTP-binding elongation factor signature 89 100 7.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PRINTS PR00315 GTP-binding elongation factor signature 125 134 7.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 PRINTS PR00315 GTP-binding elongation factor signature 49 57 7.7E-14 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS11105 0025cbd4feff7465117b7a35be9245d4 598 Pfam PF00009 Elongation factor Tu GTP binding domain 2 180 8.4E-54 T 20-04-2016 APS56_RS15625 b6c4e3d67f9fd699eba9b7510b7da519 377 SMART SM00897 25 218 2.8E-29 T 20-04-2016 IPR013702 FIST domain, N-terminal APS56_RS15625 b6c4e3d67f9fd699eba9b7510b7da519 377 Pfam PF10442 FIST C domain 219 356 3.8E-31 T 20-04-2016 IPR019494 FIST, C-domain APS56_RS15625 b6c4e3d67f9fd699eba9b7510b7da519 377 SMART SM01204 219 357 2.3E-37 T 20-04-2016 IPR019494 FIST, C-domain APS56_RS15625 b6c4e3d67f9fd699eba9b7510b7da519 377 PANTHER PTHR40252 27 377 1.8E-56 T 20-04-2016 APS56_RS15625 b6c4e3d67f9fd699eba9b7510b7da519 377 PANTHER PTHR40252:SF1 27 377 1.8E-56 T 20-04-2016 APS56_RS15625 b6c4e3d67f9fd699eba9b7510b7da519 377 Pfam PF08495 FIST N domain 27 216 4.9E-24 T 20-04-2016 IPR013702 FIST domain, N-terminal APS56_RS14495 2ebc8a2968b0d588d5a129c392f1c550 303 PANTHER PTHR33375 1 303 1.6E-90 T 20-04-2016 APS56_RS14495 2ebc8a2968b0d588d5a129c392f1c550 303 Gene3D G3DSA:3.90.1530.10 38 136 2.4E-35 T 20-04-2016 APS56_RS14495 2ebc8a2968b0d588d5a129c392f1c550 303 SUPERFAMILY SSF109709 123 232 2.88E-35 T 20-04-2016 APS56_RS14495 2ebc8a2968b0d588d5a129c392f1c550 303 Pfam PF02195 ParB-like nuclease domain 42 131 3.9E-22 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APS56_RS14495 2ebc8a2968b0d588d5a129c392f1c550 303 SMART SM00470 41 131 4.6E-28 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APS56_RS14495 2ebc8a2968b0d588d5a129c392f1c550 303 SUPERFAMILY SSF110849 40 133 4.45E-27 T 20-04-2016 IPR003115 ParB/Sulfiredoxin APS56_RS14495 2ebc8a2968b0d588d5a129c392f1c550 303 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 39 216 1.6E-48 T 20-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 APS56_RS07870 f77d6517fdeecec3c178f4d80f8dd8d2 62 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 46 2.8E-10 T 20-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type APS56_RS07870 f77d6517fdeecec3c178f4d80f8dd8d2 62 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 9.6E-20 T 20-04-2016 IPR004714 Cytochrome oxidase maturation protein cbb3-type APS56_RS13480 d83ee814f4367a9f38dfd90882aadd5b 323 Pfam PF01551 Peptidase family M23 200 295 2.5E-33 T 20-04-2016 IPR016047 Peptidase M23 APS56_RS13480 d83ee814f4367a9f38dfd90882aadd5b 323 SUPERFAMILY SSF51261 165 298 1.15E-52 T 20-04-2016 IPR011055 Duplicated hybrid motif APS56_RS13480 d83ee814f4367a9f38dfd90882aadd5b 323 PANTHER PTHR21666 4 299 3.0E-43 T 20-04-2016 APS56_RS13480 d83ee814f4367a9f38dfd90882aadd5b 323 Gene3D G3DSA:2.70.70.10 149 298 1.1E-47 T 20-04-2016 APS56_RS12125 c3b44ff053a111a7beea56fde43c4a23 141 Gene3D G3DSA:2.40.70.10 3 129 1.6E-29 T 20-04-2016 IPR021109 Aspartic peptidase domain APS56_RS12125 c3b44ff053a111a7beea56fde43c4a23 141 SUPERFAMILY SSF50630 5 132 2.08E-27 T 20-04-2016 IPR021109 Aspartic peptidase domain APS56_RS12125 c3b44ff053a111a7beea56fde43c4a23 141 Pfam PF05618 Putative ATP-dependant zinc protease 7 134 8.5E-15 T 20-04-2016 APS56_RS12125 c3b44ff053a111a7beea56fde43c4a23 141 PANTHER PTHR38037 5 132 8.2E-12 T 20-04-2016 APS56_RS11100 5ca251848f511955582a880d3a7636d7 468 Gene3D G3DSA:3.40.50.2000 247 448 5.5E-57 T 20-04-2016 APS56_RS11100 5ca251848f511955582a880d3a7636d7 468 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 467 4.8E-136 T 20-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS11100 5ca251848f511955582a880d3a7636d7 468 Pfam PF00534 Glycosyl transferases group 1 286 415 7.6E-14 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS11100 5ca251848f511955582a880d3a7636d7 468 SUPERFAMILY SSF53756 5 467 5.1E-97 T 20-04-2016 APS56_RS11100 5ca251848f511955582a880d3a7636d7 468 Hamap MF_00484 Glycogen synthase [glgA]. 1 467 35.303 T 20-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS11100 5ca251848f511955582a880d3a7636d7 468 PANTHER PTHR12526 1 467 4.7E-104 T 20-04-2016 APS56_RS11100 5ca251848f511955582a880d3a7636d7 468 PANTHER PTHR12526:SF17 1 467 4.7E-104 T 20-04-2016 APS56_RS11100 5ca251848f511955582a880d3a7636d7 468 Pfam PF08323 Starch synthase catalytic domain 3 230 2.5E-57 T 20-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APS56_RS05300 b7eb2d18aa537890c264df255a0487b7 304 Pfam PF00535 Glycosyl transferase family 2 7 121 1.5E-15 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS05300 b7eb2d18aa537890c264df255a0487b7 304 PANTHER PTHR22916 1 268 1.7E-24 T 20-04-2016 APS56_RS05300 b7eb2d18aa537890c264df255a0487b7 304 SUPERFAMILY SSF53448 3 245 2.49E-34 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05300 b7eb2d18aa537890c264df255a0487b7 304 Gene3D G3DSA:3.90.550.10 6 209 7.2E-23 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS10495 b78c5bba2da611f74626899e5ff90d74 128 Gene3D G3DSA:3.10.450.50 2 124 4.3E-41 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS10495 b78c5bba2da611f74626899e5ff90d74 128 SUPERFAMILY SSF54427 25 124 2.45E-31 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 Pfam PF02347 Glycine cleavage system P-protein 453 729 7.3E-13 T 20-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 Pfam PF02347 Glycine cleavage system P-protein 9 435 1.1E-173 T 20-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 1 946 23.36 T 20-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 9 940 0.0 T 20-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 SUPERFAMILY SSF53383 919 941 2.87E-94 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 SUPERFAMILY SSF53383 473 879 2.87E-94 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 Gene3D G3DSA:3.40.640.10 496 743 1.7E-37 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 Gene3D G3DSA:3.40.640.10 84 300 2.6E-8 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 PANTHER PTHR11773:SF1 2 948 0.0 T 20-04-2016 APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 SUPERFAMILY SSF53383 8 438 3.69E-95 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS06590 3c0d6408e08aeef79ea512e7021e72e7 949 PANTHER PTHR11773 2 948 0.0 T 20-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APS56_RS01275 51caa546da8a918d711696366bb377e8 764 SUPERFAMILY SSF52540 187 375 6.92E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01275 51caa546da8a918d711696366bb377e8 764 Gene3D G3DSA:3.40.50.300 189 242 2.9E-8 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01275 51caa546da8a918d711696366bb377e8 764 SMART SM00382 191 309 2.9E-4 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS01275 51caa546da8a918d711696366bb377e8 764 Pfam PF04471 Restriction endonuclease 7 105 2.5E-6 T 20-04-2016 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 SUPERFAMILY SSF53187 281 352 6.57E-44 T 20-04-2016 APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 SUPERFAMILY SSF53187 5 171 6.57E-44 T 20-04-2016 APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 PANTHER PTHR11014 5 354 8.3E-53 T 20-04-2016 APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 SUPERFAMILY SSF55031 172 265 5.38E-17 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 Gene3D G3DSA:3.40.630.10 294 353 3.2E-47 T 20-04-2016 APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 Gene3D G3DSA:3.40.630.10 6 180 3.2E-47 T 20-04-2016 APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 Pfam PF01546 Peptidase family M20/M25/M40 67 351 7.1E-21 T 20-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 Gene3D G3DSA:3.30.70.360 181 265 6.9E-24 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS07470 98d736e0ea9718091b997cda359738ec 355 Pfam PF07687 Peptidase dimerisation domain 168 264 5.3E-14 T 20-04-2016 IPR011650 Peptidase M20, dimerisation domain APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 SUPERFAMILY SSF51735 1 225 1.31E-65 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PANTHER PTHR24322:SF513 155 186 1.1E-51 T 20-04-2016 APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PANTHER PTHR24322:SF513 11 139 1.1E-51 T 20-04-2016 APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 Gene3D G3DSA:3.40.50.720 2 220 2.3E-67 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 4.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 4.3E-28 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.4E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.4E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.4E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 Pfam PF00106 short chain dehydrogenase 7 195 4.0E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PANTHER PTHR24322 155 186 1.1E-51 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PANTHER PTHR24322 11 139 1.1E-51 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS09270 c1f04bfbab5251752616294c0d27c1d7 239 PIRSF PIRSF000126 1 238 4.1E-52 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS06395 3f1da63a89363eb585db77a919d9ca5d 134 PIRSF PIRSF020079 7 127 2.6E-48 T 20-04-2016 IPR016769 Bacteriophage SP01, Orf1 APS56_RS06395 3f1da63a89363eb585db77a919d9ca5d 134 Gene3D G3DSA:3.40.50.1000 6 118 4.1E-50 T 20-04-2016 IPR023214 HAD-like domain APS56_RS06395 3f1da63a89363eb585db77a919d9ca5d 134 SUPERFAMILY SSF56784 8 117 1.91E-30 T 20-04-2016 IPR023214 HAD-like domain APS56_RS14110 aae12bc24da185b11539c9a55852414f 273 PANTHER PTHR13773 1 269 7.8E-48 T 20-04-2016 APS56_RS14110 aae12bc24da185b11539c9a55852414f 273 Pfam PF01148 Cytidylyltransferase family 11 268 6.4E-55 T 20-04-2016 APS56_RS14110 aae12bc24da185b11539c9a55852414f 273 PANTHER PTHR13773:SF0 1 269 7.8E-48 T 20-04-2016 APS56_RS01335 53fe08c0800f7433fabefec65898fcd9 244 Pfam PF04397 LytTr DNA-binding domain 153 240 1.0E-15 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS01335 53fe08c0800f7433fabefec65898fcd9 244 Gene3D G3DSA:3.40.50.2300 1 122 6.4E-28 T 20-04-2016 APS56_RS01335 53fe08c0800f7433fabefec65898fcd9 244 Pfam PF00072 Response regulator receiver domain 4 109 1.0E-19 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01335 53fe08c0800f7433fabefec65898fcd9 244 SUPERFAMILY SSF52172 1 125 1.28E-26 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS01335 53fe08c0800f7433fabefec65898fcd9 244 SMART SM00850 150 243 1.4E-22 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS01335 53fe08c0800f7433fabefec65898fcd9 244 Gene3D G3DSA:2.40.50.40 141 211 1.4E-19 T 20-04-2016 APS56_RS01335 53fe08c0800f7433fabefec65898fcd9 244 PANTHER PTHR26402 1 120 8.1E-30 T 20-04-2016 APS56_RS01335 53fe08c0800f7433fabefec65898fcd9 244 SMART SM00448 1 109 3.1E-22 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15460 944291a748cbc6e0298318e518445679 353 Pfam PF12725 Protein of unknown function (DUF3810) 34 346 1.8E-94 T 20-04-2016 IPR024294 Protein of unknown function DUF3810 APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 4 307 46.128 T 20-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 Pfam PF08331 Domain of unknown function (DUF1730) 60 132 1.0E-18 T 20-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 Pfam PF13484 4Fe-4S double cluster binding domain 184 248 3.2E-21 T 20-04-2016 APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 302 4.3E-104 T 20-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 SUPERFAMILY SSF46548 131 248 3.45E-18 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 Gene3D G3DSA:3.30.70.20 180 251 3.0E-9 T 20-04-2016 APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 PANTHER PTHR30002:SF4 2 302 2.5E-122 T 20-04-2016 APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 185 196 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12960 ab8dd13ad47fbdc3614b94460a9f277d 307 PANTHER PTHR30002 2 302 2.5E-122 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 PIRSF PIRSF000144 6 764 0.0 T 20-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 PANTHER PTHR11615:SF114 286 761 2.1E-226 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 PANTHER PTHR11615:SF114 3 268 2.1E-226 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 PANTHER PTHR11615 286 761 2.1E-226 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 PANTHER PTHR11615 3 268 2.1E-226 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 Pfam PF01568 Molydopterin dinucleotide binding domain 651 756 2.3E-11 T 20-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 SUPERFAMILY SSF53706 61 638 3.01E-122 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 SUPERFAMILY SSF50692 647 761 4.97E-16 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 Gene3D G3DSA:3.40.50.740 405 636 2.6E-47 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 Gene3D G3DSA:3.40.50.740 125 198 2.6E-47 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 Gene3D G3DSA:3.40.228.10 199 404 8.3E-49 T 20-04-2016 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 Pfam PF00384 Molybdopterin oxidoreductase 125 500 7.7E-23 T 20-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 28 761 1.4E-275 T 20-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 APS56_RS00895 ed3d4f275ae7760117b4dc17d4a9a0f5 764 Gene3D G3DSA:2.40.40.20 644 761 9.1E-12 T 20-04-2016 APS56_RS08955 1898f9857347408f9ffcc1b9a26e79ce 825 SUPERFAMILY SSF52317 590 735 1.44E-14 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS08955 1898f9857347408f9ffcc1b9a26e79ce 825 SUPERFAMILY SSF52317 764 821 1.44E-14 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS08955 1898f9857347408f9ffcc1b9a26e79ce 825 SUPERFAMILY SSF53187 32 321 3.64E-57 T 20-04-2016 APS56_RS08955 1898f9857347408f9ffcc1b9a26e79ce 825 SMART SM00631 38 322 2.0E-5 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APS56_RS08955 1898f9857347408f9ffcc1b9a26e79ce 825 Pfam PF00246 Zinc carboxypeptidase 45 290 1.1E-25 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APS56_RS08955 1898f9857347408f9ffcc1b9a26e79ce 825 Gene3D G3DSA:3.40.630.10 36 301 1.5E-39 T 20-04-2016 APS56_RS10080 f5d05787d56b0dc92ae9916cef872fd8 550 Pfam PF07980 SusD family 264 549 1.8E-34 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS10080 f5d05787d56b0dc92ae9916cef872fd8 550 Gene3D G3DSA:1.25.40.10 197 319 2.2E-35 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10080 f5d05787d56b0dc92ae9916cef872fd8 550 Gene3D G3DSA:1.25.40.10 405 489 2.2E-35 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10080 f5d05787d56b0dc92ae9916cef872fd8 550 SUPERFAMILY SSF48452 22 339 1.9E-85 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10080 f5d05787d56b0dc92ae9916cef872fd8 550 SUPERFAMILY SSF48452 366 549 1.9E-85 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10080 f5d05787d56b0dc92ae9916cef872fd8 550 Pfam PF14322 Starch-binding associating with outer membrane 33 217 2.1E-20 T 20-04-2016 APS56_RS06810 2897b2989af751194ab6b16614821fc1 194 Pfam PF08818 Domain of unknown function (DU1801) 14 111 1.2E-12 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 APS56_RS06810 2897b2989af751194ab6b16614821fc1 194 SUPERFAMILY SSF159888 3 122 6.02E-22 T 20-04-2016 APS56_RS06810 2897b2989af751194ab6b16614821fc1 194 PIRSF PIRSF021308 1 192 7.0E-86 T 20-04-2016 IPR016786 Uncharacterised protein YdeI, bacterial APS56_RS06810 2897b2989af751194ab6b16614821fc1 194 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 127 185 4.8E-17 T 20-04-2016 APS56_RS02625 b31561dc6a10915ffc385321b925ab59 177 SUPERFAMILY SSF53597 2 176 4.58E-33 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APS56_RS02625 b31561dc6a10915ffc385321b925ab59 177 Gene3D G3DSA:3.40.430.10 3 176 1.2E-33 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APS56_RS02625 b31561dc6a10915ffc385321b925ab59 177 PANTHER PTHR38011 2 175 1.2E-16 T 20-04-2016 APS56_RS02625 b31561dc6a10915ffc385321b925ab59 177 Pfam PF01872 RibD C-terminal domain 2 169 9.2E-19 T 20-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 Gene3D G3DSA:3.90.226.10 204 445 2.0E-37 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 PANTHER PTHR32060 317 481 7.1E-24 T 20-04-2016 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 PANTHER PTHR32060 131 297 7.1E-24 T 20-04-2016 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 PANTHER PTHR32060:SF0 317 481 7.1E-24 T 20-04-2016 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 PANTHER PTHR32060:SF0 131 297 7.1E-24 T 20-04-2016 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 SMART SM00228 112 186 5.6E-4 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 SUPERFAMILY SSF50156 107 183 1.6E-8 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 Pfam PF03572 Peptidase family S41 221 421 2.9E-23 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 SMART SM00245 195 422 5.9E-4 T 20-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 Gene3D G3DSA:2.30.42.10 123 182 5.2E-7 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 SUPERFAMILY SSF52096 215 427 3.31E-34 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS15335 b94251c1b42bc15e0d8898930efc4a5a 488 SUPERFAMILY SSF52096 35 126 3.31E-34 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 171 182 - T 20-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 Pfam PF00082 Subtilase family 166 441 5.5E-32 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 SUPERFAMILY SSF52743 9 54 2.49E-57 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 SUPERFAMILY SSF52743 85 451 2.49E-57 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 PIRSF PIRSF037903 1 460 2.1E-186 T 20-04-2016 IPR017317 Peptidase S8A, subtilisin-related, bacteroidetes-2 APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 PANTHER PTHR10795:SF332 141 456 2.3E-48 T 20-04-2016 APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 PANTHER PTHR10795 141 456 2.3E-48 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 464 537 1.2E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 PRINTS PR00723 Subtilisin serine protease family (S8) signature 213 226 2.2E-6 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 PRINTS PR00723 Subtilisin serine protease family (S8) signature 166 185 2.2E-6 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 PRINTS PR00723 Subtilisin serine protease family (S8) signature 392 408 2.2E-6 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS04375 8320102e2c92400a2aa4509dd6cce5bb 537 Gene3D G3DSA:3.40.50.200 131 450 1.3E-50 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 9.0E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 9.0E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 9.0E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 Gene3D G3DSA:3.40.50.720 2 223 1.4E-48 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 SUPERFAMILY SSF51735 3 233 6.77E-49 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PIRSF PIRSF000126 1 260 5.3E-57 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 Pfam PF00106 short chain dehydrogenase 3 189 1.4E-39 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PANTHER PTHR24322 7 134 1.0E-34 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PANTHER PTHR24322 150 182 1.0E-34 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.8E-22 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.8E-22 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.8E-22 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 2.8E-22 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.8E-22 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PANTHER PTHR24322:SF57 7 134 1.0E-34 T 20-04-2016 APS56_RS05815 05f0f855b3077b5adca17766a0b9f2ff 261 PANTHER PTHR24322:SF57 150 182 1.0E-34 T 20-04-2016 APS56_RS00545 89df330e9453be95800620841639904f 280 PANTHER PTHR38461 2 280 8.8E-153 T 20-04-2016 APS56_RS00545 89df330e9453be95800620841639904f 280 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 5 280 52.528 T 20-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APS56_RS00545 89df330e9453be95800620841639904f 280 Gene3D G3DSA:2.60.120.500 135 280 7.4E-70 T 20-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APS56_RS00545 89df330e9453be95800620841639904f 280 PIRSF PIRSF006625 5 280 1.2E-128 T 20-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APS56_RS00545 89df330e9453be95800620841639904f 280 SUPERFAMILY SSF51182 6 264 4.45E-98 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS00545 89df330e9453be95800620841639904f 280 Pfam PF04962 KduI/IolB family 29 265 4.3E-31 T 20-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APS56_RS00545 89df330e9453be95800620841639904f 280 Gene3D G3DSA:2.60.120.520 24 134 2.1E-50 T 20-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 Gene3D G3DSA:3.40.50.620 210 381 1.2E-52 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 Pfam PF00958 GMP synthase C terminal domain 421 510 1.7E-42 T 20-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 SUPERFAMILY SSF54810 391 511 1.44E-49 T 20-04-2016 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 PANTHER PTHR11922:SF2 1 508 5.5E-256 T 20-04-2016 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 3 511 49.544 T 20-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 Pfam PF00117 Glutamine amidotransferase class-I 8 187 2.1E-27 T 20-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 PANTHER PTHR11922 1 508 5.5E-256 T 20-04-2016 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 Pfam PF02540 NAD synthase 205 275 2.3E-8 T 20-04-2016 IPR022310 NAD/GMP synthase APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 SUPERFAMILY SSF52402 181 432 5.73E-53 T 20-04-2016 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 200 511 8.1E-140 T 20-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 6 190 7.8E-54 T 20-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 SUPERFAMILY SSF52317 5 196 2.06E-44 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 Gene3D G3DSA:3.40.50.880 2 209 3.0E-50 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS04415 dc04e9cc8adecbb15083b53a5c615285 511 Gene3D G3DSA:3.30.300.10 387 511 8.3E-52 T 20-04-2016 APS56_RS07780 f466dfd1d78c9b50fec0fdacd43d9613 631 Gene3D G3DSA:2.160.20.10 50 538 2.6E-85 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS07780 f466dfd1d78c9b50fec0fdacd43d9613 631 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 563 630 6.7E-13 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS07780 f466dfd1d78c9b50fec0fdacd43d9613 631 Pfam PF14592 Chondroitinase B 51 415 2.0E-73 T 20-04-2016 APS56_RS07780 f466dfd1d78c9b50fec0fdacd43d9613 631 SMART SM00710 370 391 1.4 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07780 f466dfd1d78c9b50fec0fdacd43d9613 631 SMART SM00710 324 357 26.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07780 f466dfd1d78c9b50fec0fdacd43d9613 631 SMART SM00710 277 298 730.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07780 f466dfd1d78c9b50fec0fdacd43d9613 631 SMART SM00710 117 138 6800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07780 f466dfd1d78c9b50fec0fdacd43d9613 631 SUPERFAMILY SSF51126 49 462 3.14E-61 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 PIRSF PIRSF001529 1 422 1.9E-141 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 PANTHER PTHR11778:SF0 1 418 9.4E-154 T 20-04-2016 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 SUPERFAMILY SSF46589 1 116 5.75E-20 T 20-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 2.0E-131 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 SUPERFAMILY SSF55681 120 418 7.71E-85 T 20-04-2016 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 400 1.3E-28 T 20-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 Gene3D G3DSA:1.10.287.40 1 108 3.7E-18 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 PANTHER PTHR11778 1 418 9.4E-154 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 PRINTS PR00981 Seryl-tRNA synthetase signature 335 351 2.1E-19 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 PRINTS PR00981 Seryl-tRNA synthetase signature 278 291 2.1E-19 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 PRINTS PR00981 Seryl-tRNA synthetase signature 266 278 2.1E-19 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 PRINTS PR00981 Seryl-tRNA synthetase signature 353 369 2.1E-19 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 PRINTS PR00981 Seryl-tRNA synthetase signature 318 331 2.1E-19 T 20-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 Gene3D G3DSA:3.30.930.10 109 418 9.2E-111 T 20-04-2016 APS56_RS09585 8e06c31225d8910001df1c85428c8eb2 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 111 5.2E-22 T 20-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 58 398 1.4E-75 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 PIRSF PIRSF000505 57 408 1.2E-97 T 20-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 404 24.476 T 20-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 SUPERFAMILY SSF55205 11 404 1.57E-82 T 20-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 Gene3D G3DSA:3.65.10.10 183 405 3.5E-50 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 PANTHER PTHR21090 2 407 3.5E-97 T 20-04-2016 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 ProSitePatterns PS00885 EPSP synthase signature 2. 316 334 - T 20-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 PANTHER PTHR21090:SF5 2 407 3.5E-97 T 20-04-2016 APS56_RS07275 61dbef30db2eeb9a29491c7051dd8fc1 410 Gene3D G3DSA:3.65.10.10 20 182 1.4E-38 T 20-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APS56_RS13460 3e3f1858dd6e60a05c977bfcdcfd2845 285 PANTHER PTHR30373:SF2 16 211 3.5E-29 T 20-04-2016 APS56_RS13460 3e3f1858dd6e60a05c977bfcdcfd2845 285 Pfam PF04536 Acid phosphatase of thylakoid lumen protein 51 174 3.0E-33 T 20-04-2016 IPR007621 TPM domain APS56_RS13460 3e3f1858dd6e60a05c977bfcdcfd2845 285 PANTHER PTHR30373 16 211 3.5E-29 T 20-04-2016 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 SUPERFAMILY SSF51735 4 167 1.0E-67 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 7.5E-45 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 7.5E-45 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 7.5E-45 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 7.5E-45 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 7.5E-45 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 Gene3D G3DSA:3.40.50.720 1 159 4.9E-79 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 Gene3D G3DSA:3.30.360.10 160 315 6.0E-81 T 20-04-2016 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 151 4.5E-59 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 SMART SM00846 4 151 8.1E-92 T 20-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 PIRSF PIRSF000149 2 333 5.1E-130 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 SUPERFAMILY SSF55347 150 313 2.47E-76 T 20-04-2016 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 20-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 PANTHER PTHR10836 1 332 2.4E-230 T 20-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 1.7E-68 T 20-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APS56_RS02870 6e4089f347709d06cf58ae811bae3b00 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 5 325 1.5E-133 T 20-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 215 2.9E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 PANTHER PTHR11532:SF57 505 1037 8.0E-260 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 PANTHER PTHR11532:SF57 1 395 8.0E-260 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 PANTHER PTHR11532 505 1037 8.0E-260 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 PANTHER PTHR11532 1 395 8.0E-260 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Pfam PF13715 CarboxypepD_reg-like domain 19 98 1.2E-15 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 17 1039 2.1E-272 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 SUPERFAMILY SSF56935 430 779 4.03E-81 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 SUPERFAMILY SSF56935 867 911 4.03E-81 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 SUPERFAMILY SSF56935 947 1039 4.03E-81 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 SUPERFAMILY SSF56935 95 239 4.03E-81 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 SUPERFAMILY SSF56935 300 388 4.03E-81 T 20-04-2016 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Gene3D G3DSA:2.40.170.20 425 797 1.7E-54 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Gene3D G3DSA:2.40.170.20 937 1039 1.7E-54 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Gene3D G3DSA:2.40.170.20 309 392 1.7E-54 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Gene3D G3DSA:2.40.170.20 876 901 1.7E-54 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Gene3D G3DSA:2.40.170.20 219 235 1.7E-54 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Gene3D G3DSA:2.60.40.1120 18 103 6.3E-12 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 191 221 6.1E-20 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 SUPERFAMILY SSF49464 18 97 4.32E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS04655 e34cda10e84b067c20ef418765090467 1039 Gene3D G3DSA:2.170.130.10 107 218 1.2E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 PANTHER PTHR11063:SF6 1 254 2.3E-49 T 20-04-2016 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 256 30.062 T 20-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 6.3E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 6.3E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 6.3E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 6.3E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 6.3E-38 T 20-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 SUPERFAMILY SSF53633 5 254 3.27E-57 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 Gene3D G3DSA:3.40.1160.10 3 254 1.9E-50 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 PANTHER PTHR11063 1 254 2.3E-49 T 20-04-2016 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 254 1.6E-63 T 20-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 Pfam PF00696 Amino acid kinase family 5 234 1.0E-42 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS05115 40a9afbb8dfb645782d528b07f49f2ef 256 PIRSF PIRSF000729 1 255 3.0E-73 T 20-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 10 497 42.783 T 20-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 PANTHER PTHR22594:SF4 2 508 1.8E-245 T 20-04-2016 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 PRINTS PR00982 Lysyl-tRNA synthetase signature 378 394 1.6E-37 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 PRINTS PR00982 Lysyl-tRNA synthetase signature 209 225 1.6E-37 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 PRINTS PR00982 Lysyl-tRNA synthetase signature 256 273 1.6E-37 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 PRINTS PR00982 Lysyl-tRNA synthetase signature 193 203 1.6E-37 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 PRINTS PR00982 Lysyl-tRNA synthetase signature 238 251 1.6E-37 T 20-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 SUPERFAMILY SSF55681 156 495 4.38E-113 T 20-04-2016 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 PANTHER PTHR22594 2 508 1.8E-245 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 Gene3D G3DSA:3.30.930.10 154 494 6.3E-115 T 20-04-2016 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 4 498 2.7E-184 T 20-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 Gene3D G3DSA:2.40.50.140 5 141 1.3E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 Pfam PF01336 OB-fold nucleic acid binding domain 50 133 7.2E-13 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 SUPERFAMILY SSF50249 3 141 4.65E-35 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13640 a2d93c70dd2f9130effd08a2d5672ebc 562 Pfam PF00152 tRNA synthetases class II (D, K and N) 157 494 6.0E-80 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS07925 53b42983bcf40769f0e7e3ce94f413a8 542 PANTHER PTHR11819 6 501 6.2E-149 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS07925 53b42983bcf40769f0e7e3ce94f413a8 542 PANTHER PTHR11819:SF7 6 501 6.2E-149 T 20-04-2016 APS56_RS07925 53b42983bcf40769f0e7e3ce94f413a8 542 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 41 458 2.3E-114 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS07925 53b42983bcf40769f0e7e3ce94f413a8 542 Pfam PF00474 Sodium:solute symporter family 41 458 6.4E-69 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS01400 09cffb1699720ff9ea8edf420ea56bf7 98 Pfam PF12728 Helix-turn-helix domain 39 86 1.2E-6 T 20-04-2016 APS56_RS01400 09cffb1699720ff9ea8edf420ea56bf7 98 PANTHER PTHR34585 1 97 8.1E-20 T 20-04-2016 APS56_RS01400 09cffb1699720ff9ea8edf420ea56bf7 98 SUPERFAMILY SSF46955 37 87 1.74E-6 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 PANTHER PTHR11019 38 259 5.0E-55 T 20-04-2016 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 PANTHER PTHR11019:SF99 38 259 5.0E-55 T 20-04-2016 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 243 3.8E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 243 259 3.8E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 SMART SM00342 177 259 1.2E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 SUPERFAMILY SSF51182 10 182 6.4E-11 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 Gene3D G3DSA:1.10.10.60 159 213 1.4E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 Gene3D G3DSA:1.10.10.60 214 258 1.9E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 Pfam PF12833 Helix-turn-helix domain 183 258 3.6E-20 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 Pfam PF02311 AraC-like ligand binding domain 24 109 3.0E-6 T 20-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 Gene3D G3DSA:2.60.120.10 37 97 1.8E-11 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 SUPERFAMILY SSF46689 214 258 2.64E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02685 0df504d4902c5c7d6001044482e228d2 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 214 255 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS06330 93b51fc37c6b660612d0c932e146ae24 484 Gene3D G3DSA:2.120.10.30 196 263 4.8E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06330 93b51fc37c6b660612d0c932e146ae24 484 Gene3D G3DSA:2.120.10.30 445 459 4.8E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06330 93b51fc37c6b660612d0c932e146ae24 484 Gene3D G3DSA:2.120.10.30 298 370 4.8E-5 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS06330 93b51fc37c6b660612d0c932e146ae24 484 Pfam PF14269 Arylsulfotransferase (ASST) 197 458 1.8E-28 T 20-04-2016 APS56_RS06330 93b51fc37c6b660612d0c932e146ae24 484 PANTHER PTHR35340 85 384 3.5E-13 T 20-04-2016 APS56_RS01385 2203d7fe4beab387d4286e0efa684532 364 Pfam PF13102 Phage integrase SAM-like domain 3 136 1.9E-32 T 20-04-2016 IPR025269 Phage integrase SAM-like domain APS56_RS01385 2203d7fe4beab387d4286e0efa684532 364 Gene3D G3DSA:1.10.443.10 190 360 4.9E-33 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS01385 2203d7fe4beab387d4286e0efa684532 364 PANTHER PTHR30349 3 362 9.9E-70 T 20-04-2016 APS56_RS01385 2203d7fe4beab387d4286e0efa684532 364 SUPERFAMILY SSF56349 90 358 7.06E-51 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS01385 2203d7fe4beab387d4286e0efa684532 364 PANTHER PTHR30349:SF22 3 362 9.9E-70 T 20-04-2016 APS56_RS01385 2203d7fe4beab387d4286e0efa684532 364 Pfam PF00589 Phage integrase family 213 348 2.5E-16 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS12740 a256988221476b041906667344b5049c 326 Gene3D G3DSA:3.40.50.720 2 144 5.8E-40 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12740 a256988221476b041906667344b5049c 326 SUPERFAMILY SSF51735 3 155 5.2E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS12740 a256988221476b041906667344b5049c 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 125 3.0E-21 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS12740 a256988221476b041906667344b5049c 326 PANTHER PTHR22604 1 290 1.3E-54 T 20-04-2016 APS56_RS12740 a256988221476b041906667344b5049c 326 SUPERFAMILY SSF55347 131 268 4.14E-21 T 20-04-2016 APS56_RS12740 a256988221476b041906667344b5049c 326 Gene3D G3DSA:3.30.360.10 145 320 2.8E-18 T 20-04-2016 APS56_RS01550 37f0751e4919e19761830f4f13347789 229 Pfam PF03641 Possible lysine decarboxylase 83 215 1.1E-32 T 20-04-2016 IPR031100 LOG family APS56_RS01550 37f0751e4919e19761830f4f13347789 229 Gene3D G3DSA:3.40.50.450 20 224 1.1E-67 T 20-04-2016 APS56_RS01550 37f0751e4919e19761830f4f13347789 229 SUPERFAMILY SSF102405 11 216 2.29E-61 T 20-04-2016 APS56_RS01550 37f0751e4919e19761830f4f13347789 229 PANTHER PTHR31223:SF1 10 222 1.4E-100 T 20-04-2016 APS56_RS01550 37f0751e4919e19761830f4f13347789 229 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 41 214 1.5E-43 T 20-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG APS56_RS01550 37f0751e4919e19761830f4f13347789 229 PANTHER PTHR31223 10 222 1.4E-100 T 20-04-2016 APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 Gene3D G3DSA:1.10.10.10 121 187 3.6E-18 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 Gene3D G3DSA:1.10.1740.10 2 92 2.2E-27 T 20-04-2016 APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 1.5E-28 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 Pfam PF08281 Sigma-70, region 4 131 180 8.4E-14 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 SUPERFAMILY SSF88659 122 185 1.87E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 PANTHER PTHR30173 1 188 7.0E-41 T 20-04-2016 APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 SUPERFAMILY SSF88946 3 98 1.57E-23 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 43 74 - T 20-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS05825 1e08cb481a3ef960829196d479f39eee 192 Pfam PF04542 Sigma-70 region 2 21 87 6.1E-16 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 PIRSF PIRSF038800 4 423 1.3E-163 T 20-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 Gene3D G3DSA:3.40.640.10 81 261 1.0E-14 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 TIGRFAM TIGR01814 kynureninase: kynureninase 12 421 1.8E-138 T 20-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 PANTHER PTHR14084:SF0 9 423 5.2E-216 T 20-04-2016 APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 Pfam PF00266 Aminotransferase class-V 88 381 2.7E-14 T 20-04-2016 IPR000192 Aminotransferase class V domain APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 SUPERFAMILY SSF53383 8 422 4.34E-75 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 Hamap MF_01970 Kynureninase [kynU]. 1 421 45.686 T 20-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 Gene3D G3DSA:3.90.1150.10 276 422 4.0E-52 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS14280 d749730707f18c2ac7dab380b1c347c0 423 PANTHER PTHR14084 9 423 5.2E-216 T 20-04-2016 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|UniPathway: UPA00253|UniPathway: UPA00334 APS56_RS04940 a64615356da8e1cead1828d0565b90d3 400 Pfam PF07396 Phosphate-selective porin O and P 51 176 2.1E-6 T 20-04-2016 IPR010870 Phosphate-selective porin O/P APS56_RS04940 a64615356da8e1cead1828d0565b90d3 400 SUPERFAMILY SSF56935 59 394 4.76E-17 T 20-04-2016 APS56_RS04940 a64615356da8e1cead1828d0565b90d3 400 Gene3D G3DSA:2.40.160.10 32 396 2.7E-29 T 20-04-2016 IPR023614 Porin domain APS56_RS08900 bb1a1b2ffa49147c82ac88bb2315dd21 377 PIRSF PIRSF000390 2 376 2.4E-100 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS08900 bb1a1b2ffa49147c82ac88bb2315dd21 377 PANTHER PTHR30244:SF15 1 376 4.0E-115 T 20-04-2016 APS56_RS08900 bb1a1b2ffa49147c82ac88bb2315dd21 377 PANTHER PTHR30244 1 376 4.0E-115 T 20-04-2016 APS56_RS08900 bb1a1b2ffa49147c82ac88bb2315dd21 377 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 370 2.1E-114 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS08900 bb1a1b2ffa49147c82ac88bb2315dd21 377 Gene3D G3DSA:3.90.1150.10 252 376 1.9E-35 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS08900 bb1a1b2ffa49147c82ac88bb2315dd21 377 Gene3D G3DSA:3.40.640.10 15 251 1.5E-80 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS08900 bb1a1b2ffa49147c82ac88bb2315dd21 377 SUPERFAMILY SSF53383 13 376 2.34E-109 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PANTHER PTHR12631 35 225 4.2E-53 T 20-04-2016 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PANTHER PTHR12631 251 511 4.2E-53 T 20-04-2016 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 Gene3D G3DSA:2.60.40.1500 400 541 1.6E-32 T 20-04-2016 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 ProSitePatterns PS01027 Glycosyl hydrolases family 39 active site. 170 179 - T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 Pfam PF01229 Glycosyl hydrolases family 39 20 541 8.6E-101 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PRINTS PR00745 Glycosyl hydrolase family 39 signature 489 503 1.6E-17 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PRINTS PR00745 Glycosyl hydrolase family 39 signature 478 489 1.6E-17 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PRINTS PR00745 Glycosyl hydrolase family 39 signature 167 183 1.6E-17 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PRINTS PR00745 Glycosyl hydrolase family 39 signature 101 117 1.6E-17 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PRINTS PR00745 Glycosyl hydrolase family 39 signature 150 167 1.6E-17 T 20-04-2016 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PANTHER PTHR12631:SF7 35 225 4.2E-53 T 20-04-2016 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 PANTHER PTHR12631:SF7 251 511 4.2E-53 T 20-04-2016 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 Gene3D G3DSA:3.20.20.80 35 399 9.7E-93 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 SUPERFAMILY SSF51445 33 223 1.31E-73 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 SUPERFAMILY SSF51445 254 406 1.31E-73 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS05970 3e4a86c102bc52d99d47f46a20b795c4 544 SUPERFAMILY SSF51011 394 541 1.47E-20 T 20-04-2016 APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 SUPERFAMILY SSF51735 5 247 1.17E-90 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 246 1.0E-101 T 20-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 192 2.3E-4 T 20-04-2016 APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.4E-16 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.4E-16 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 5.4E-16 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.4E-49 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 5.4E-49 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.4E-49 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.4E-49 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.4E-49 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.4E-49 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 Gene3D G3DSA:3.40.50.720 2 247 1.9E-92 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 3.0E-72 T 20-04-2016 APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PANTHER PTHR24322 11 140 5.9E-60 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PANTHER PTHR24322 156 188 5.9E-60 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PANTHER PTHR24322:SF328 11 140 5.9E-60 T 20-04-2016 APS56_RS02005 be5990fa0b62160e9106610a029ba22d 248 PANTHER PTHR24322:SF328 156 188 5.9E-60 T 20-04-2016 APS56_RS04810 b954aea79c8f8864ae1a77823d788011 759 Gene3D G3DSA:2.60.120.260 485 559 4.4E-5 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS04810 b954aea79c8f8864ae1a77823d788011 759 Pfam PF12831 FAD dependent oxidoreductase 22 434 3.7E-90 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04810 b954aea79c8f8864ae1a77823d788011 759 SUPERFAMILY SSF51905 242 288 6.32E-17 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04810 b954aea79c8f8864ae1a77823d788011 759 SUPERFAMILY SSF51905 18 177 6.32E-17 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04810 b954aea79c8f8864ae1a77823d788011 759 SUPERFAMILY SSF51905 362 414 6.32E-17 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04810 b954aea79c8f8864ae1a77823d788011 759 Gene3D G3DSA:3.40.50.720 22 141 1.9E-20 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10740 4d929ed8f0490e8e7a453eaef23eefa5 249 PANTHER PTHR22916:SF32 1 203 3.9E-45 T 20-04-2016 APS56_RS10740 4d929ed8f0490e8e7a453eaef23eefa5 249 Gene3D G3DSA:3.90.550.10 2 214 2.0E-44 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS10740 4d929ed8f0490e8e7a453eaef23eefa5 249 PANTHER PTHR22916 1 203 3.9E-45 T 20-04-2016 APS56_RS10740 4d929ed8f0490e8e7a453eaef23eefa5 249 SUPERFAMILY SSF53448 2 213 1.78E-52 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS10740 4d929ed8f0490e8e7a453eaef23eefa5 249 Pfam PF00535 Glycosyl transferase family 2 1 111 9.2E-33 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS08075 d7ceb1cc94bb9ce49e6c57f0722adbd5 136 PANTHER PTHR39434 1 136 2.3E-16 T 20-04-2016 APS56_RS08075 d7ceb1cc94bb9ce49e6c57f0722adbd5 136 SUPERFAMILY SSF54593 5 128 2.13E-11 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS08075 d7ceb1cc94bb9ce49e6c57f0722adbd5 136 Gene3D G3DSA:3.10.180.10 6 131 2.6E-15 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS08930 4c555835ee4cd232047c5cea9d9230d7 534 SUPERFAMILY SSF48452 34 528 4.3E-72 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08930 4c555835ee4cd232047c5cea9d9230d7 534 Pfam PF12771 Starch-binding associating with outer membrane 380 511 2.3E-12 T 20-04-2016 APS56_RS08930 4c555835ee4cd232047c5cea9d9230d7 534 Pfam PF12771 Starch-binding associating with outer membrane 11 292 3.8E-16 T 20-04-2016 APS56_RS08930 4c555835ee4cd232047c5cea9d9230d7 534 PANTHER PTHR35148 2 300 8.3E-19 T 20-04-2016 APS56_RS08930 4c555835ee4cd232047c5cea9d9230d7 534 PANTHER PTHR35148 336 532 8.3E-19 T 20-04-2016 APS56_RS07455 29b97522cff06f414eaf954dc7fab332 291 PANTHER PTHR23024:SF41 9 289 1.7E-78 T 20-04-2016 APS56_RS07455 29b97522cff06f414eaf954dc7fab332 291 Gene3D G3DSA:3.40.50.1820 37 289 5.2E-76 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS07455 29b97522cff06f414eaf954dc7fab332 291 PANTHER PTHR23024 9 289 1.7E-78 T 20-04-2016 APS56_RS07455 29b97522cff06f414eaf954dc7fab332 291 Pfam PF00326 Prolyl oligopeptidase family 127 289 1.3E-14 T 20-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APS56_RS07455 29b97522cff06f414eaf954dc7fab332 291 SUPERFAMILY SSF53474 45 291 3.37E-41 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS05765 8cc28703a206c720b7bf5bdef40c446b 367 PANTHER PTHR30244:SF13 14 366 1.2E-98 T 20-04-2016 APS56_RS05765 8cc28703a206c720b7bf5bdef40c446b 367 SUPERFAMILY SSF53383 13 366 5.35E-97 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS05765 8cc28703a206c720b7bf5bdef40c446b 367 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 363 9.0E-102 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS05765 8cc28703a206c720b7bf5bdef40c446b 367 PANTHER PTHR30244 14 366 1.2E-98 T 20-04-2016 APS56_RS05765 8cc28703a206c720b7bf5bdef40c446b 367 PIRSF PIRSF000390 6 367 2.5E-87 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS05765 8cc28703a206c720b7bf5bdef40c446b 367 Gene3D G3DSA:3.90.1150.10 250 366 3.0E-30 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS05765 8cc28703a206c720b7bf5bdef40c446b 367 Gene3D G3DSA:3.40.640.10 14 248 1.0E-69 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS04140 4dd25af62ebf3496c502a5db3fbd6eb7 149 Pfam PF04116 Fatty acid hydroxylase superfamily 11 137 5.1E-10 T 20-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 APS56_RS04140 4dd25af62ebf3496c502a5db3fbd6eb7 149 PANTHER PTHR31899 17 143 1.3E-20 T 20-04-2016 APS56_RS13340 e14f2aa1a960d83a9e3732370a9534aa 192 PANTHER PTHR32552:SF23 6 188 7.3E-52 T 20-04-2016 APS56_RS13340 e14f2aa1a960d83a9e3732370a9534aa 192 Gene3D G3DSA:3.30.420.10 28 184 9.6E-33 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS13340 e14f2aa1a960d83a9e3732370a9534aa 192 Pfam PF00665 Integrase core domain 32 147 1.9E-26 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS13340 e14f2aa1a960d83a9e3732370a9534aa 192 PANTHER PTHR32552 6 188 7.3E-52 T 20-04-2016 APS56_RS13340 e14f2aa1a960d83a9e3732370a9534aa 192 SUPERFAMILY SSF53098 28 188 1.41E-36 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS11905 152f64421d91638faf4e1927ea5cd291 291 SUPERFAMILY SSF103481 42 140 2.48E-13 T 20-04-2016 APS56_RS11905 152f64421d91638faf4e1927ea5cd291 291 SUPERFAMILY SSF103481 213 287 4.32E-6 T 20-04-2016 APS56_RS11905 152f64421d91638faf4e1927ea5cd291 291 PANTHER PTHR12715 8 290 1.5E-35 T 20-04-2016 APS56_RS11905 152f64421d91638faf4e1927ea5cd291 291 Pfam PF00892 EamA-like transporter family 154 286 2.1E-13 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS11905 152f64421d91638faf4e1927ea5cd291 291 Pfam PF00892 EamA-like transporter family 8 137 6.4E-23 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 Pfam PF13375 RnfC Barrel sandwich hybrid domain 7 102 5.9E-27 T 20-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 SUPERFAMILY SSF46548 327 434 8.89E-21 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 407 418 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 368 379 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 PANTHER PTHR11780 7 428 4.9E-173 T 20-04-2016 APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 PANTHER PTHR11780:SF1 7 428 4.9E-173 T 20-04-2016 APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 Pfam PF13237 4Fe-4S dicluster domain 364 418 7.7E-9 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 SUPERFAMILY SSF142019 87 294 1.29E-56 T 20-04-2016 APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 130 276 9.2E-51 T 20-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 Pfam PF10531 SLBB domain 288 335 1.3E-13 T 20-04-2016 IPR019554 Soluble ligand binding domain APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 Gene3D G3DSA:1.10.1060.10 317 434 6.7E-17 T 20-04-2016 APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 4 435 8.1E-173 T 20-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APS56_RS12485 314565cfeced87e5efa0b66aa4a81935 442 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 442 143.675 T 20-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APS56_RS09075 1952136610ad905b035227bbd644bdb0 482 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 152 354 5.0E-24 T 20-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT APS56_RS09075 1952136610ad905b035227bbd644bdb0 482 PANTHER PTHR13285 1 448 1.1E-127 T 20-04-2016 APS56_RS09075 1952136610ad905b035227bbd644bdb0 482 PIRSF PIRSF500217 1 482 5.8E-148 T 20-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 APS56_RS09075 1952136610ad905b035227bbd644bdb0 482 PANTHER PTHR13285:SF24 1 448 1.1E-127 T 20-04-2016 APS56_RS09075 1952136610ad905b035227bbd644bdb0 482 PIRSF PIRSF016636 1 482 2.3E-148 T 20-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 SUPERFAMILY SSF54713 57 98 3.27E-19 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 SUPERFAMILY SSF54713 179 193 3.27E-19 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 SUPERFAMILY SSF54713 268 324 3.27E-19 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 Hamap MF_00050 Elongation factor Ts [tsf]. 1 324 45.705 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 ProSitePatterns PS01126 Elongation factor Ts signature 1. 15 30 - T 20-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 Gene3D G3DSA:3.30.479.20 289 324 3.3E-21 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 Gene3D G3DSA:3.30.479.20 179 194 3.3E-21 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 Gene3D G3DSA:3.30.479.20 61 98 3.3E-21 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 Pfam PF00889 Elongation factor TS 77 324 1.7E-50 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 PANTHER PTHR11741 1 210 4.1E-66 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 PANTHER PTHR11741 253 324 4.1E-66 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 SUPERFAMILY SSF46934 6 58 1.79E-17 T 20-04-2016 IPR009060 UBA-like GO:0005515 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 Gene3D G3DSA:1.10.8.10 6 58 1.9E-25 T 20-04-2016 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 6 324 1.3E-62 T 20-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 SUPERFAMILY SSF54713 151 230 3.6E-11 T 20-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APS56_RS08175 340ea9b222bc3b9f308538d5fe01227c 324 Gene3D G3DSA:1.10.286.20 241 280 5.0E-6 T 20-04-2016 APS56_RS02640 c3ae37636bd0b519d38f542a47114483 366 SUPERFAMILY SSF159275 6 184 3.14E-50 T 20-04-2016 APS56_RS02640 c3ae37636bd0b519d38f542a47114483 366 Pfam PF06475 Putative glycolipid-binding 8 183 9.1E-50 T 20-04-2016 IPR009467 Putative glycolipid-binding protein APS56_RS09800 48a1042d2535db4b0519ac1662bf5ee6 506 Gene3D G3DSA:2.60.120.200 365 494 3.2E-7 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS09800 48a1042d2535db4b0519ac1662bf5ee6 506 Gene3D G3DSA:3.40.50.880 10 236 2.2E-41 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS09800 48a1042d2535db4b0519ac1662bf5ee6 506 PANTHER PTHR40469 1 318 7.6E-40 T 20-04-2016 APS56_RS09800 48a1042d2535db4b0519ac1662bf5ee6 506 SUPERFAMILY SSF52317 11 233 1.9E-41 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS09800 48a1042d2535db4b0519ac1662bf5ee6 506 PANTHER PTHR40469:SF1 1 318 7.6E-40 T 20-04-2016 APS56_RS09800 48a1042d2535db4b0519ac1662bf5ee6 506 SUPERFAMILY SSF49899 370 493 7.92E-7 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS09800 48a1042d2535db4b0519ac1662bf5ee6 506 Pfam PF06283 Trehalose utilisation 11 230 6.2E-61 T 20-04-2016 IPR029010 ThuA-like domain APS56_RS02570 9e1109a67ff55896ba21c0c2f346b825 152 SUPERFAMILY SSF55961 12 147 5.24E-29 T 20-04-2016 APS56_RS02570 9e1109a67ff55896ba21c0c2f346b825 152 Gene3D G3DSA:3.30.530.20 3 150 4.3E-24 T 20-04-2016 IPR023393 START-like domain APS56_RS02570 9e1109a67ff55896ba21c0c2f346b825 152 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 149 1.4E-12 T 20-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 APS56_RS11715 2ced25b7322e7c3a5dfd4f93af654af2 319 Pfam PF00691 OmpA family 198 299 1.0E-15 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS11715 2ced25b7322e7c3a5dfd4f93af654af2 319 Gene3D G3DSA:3.30.1330.60 183 307 1.3E-32 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS11715 2ced25b7322e7c3a5dfd4f93af654af2 319 PANTHER PTHR30128 179 311 3.7E-32 T 20-04-2016 APS56_RS11715 2ced25b7322e7c3a5dfd4f93af654af2 319 SUPERFAMILY SSF103088 182 305 5.36E-29 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS05480 c651317ddb8ed06c40063b697cc55fdd 221 PIRSF PIRSF026671 2 221 5.7E-66 T 20-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 APS56_RS05480 c651317ddb8ed06c40063b697cc55fdd 221 SUPERFAMILY SSF55166 21 220 7.85E-62 T 20-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APS56_RS05480 c651317ddb8ed06c40063b697cc55fdd 221 PANTHER PTHR22935 60 221 1.9E-60 T 20-04-2016 APS56_RS05480 c651317ddb8ed06c40063b697cc55fdd 221 PANTHER PTHR22935:SF67 60 221 1.9E-60 T 20-04-2016 APS56_RS05480 c651317ddb8ed06c40063b697cc55fdd 221 Gene3D G3DSA:3.30.1380.10 21 220 1.5E-69 T 20-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APS56_RS05480 c651317ddb8ed06c40063b697cc55fdd 221 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 23 219 29.74 T 20-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 APS56_RS05480 c651317ddb8ed06c40063b697cc55fdd 221 Pfam PF01427 D-ala-D-ala dipeptidase 23 220 4.2E-41 T 20-04-2016 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 APS56_RS01230 142d9c39ca38f7250eeab3ded80b3769 270 Pfam PF00149 Calcineurin-like phosphoesterase 48 212 7.4E-13 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS01230 142d9c39ca38f7250eeab3ded80b3769 270 Gene3D G3DSA:3.60.21.10 47 217 9.7E-24 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS01230 142d9c39ca38f7250eeab3ded80b3769 270 PANTHER PTHR31302:SF6 12 270 1.0E-50 T 20-04-2016 APS56_RS01230 142d9c39ca38f7250eeab3ded80b3769 270 PANTHER PTHR31302 12 270 1.0E-50 T 20-04-2016 APS56_RS01230 142d9c39ca38f7250eeab3ded80b3769 270 SUPERFAMILY SSF56300 45 261 1.9E-29 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 PANTHER PTHR32282:SF5 410 694 4.0E-150 T 20-04-2016 APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 PANTHER PTHR32282:SF5 1 334 4.0E-150 T 20-04-2016 APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 Pfam PF00905 Penicillin binding protein transpeptidase domain 419 659 7.4E-24 T 20-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 Gene3D G3DSA:1.10.3810.10 64 244 3.0E-55 T 20-04-2016 APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 PANTHER PTHR32282 410 694 4.0E-150 T 20-04-2016 APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 PANTHER PTHR32282 1 334 4.0E-150 T 20-04-2016 APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 SUPERFAMILY SSF56601 225 247 2.33E-95 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 SUPERFAMILY SSF56601 277 337 2.33E-95 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 SUPERFAMILY SSF56601 411 700 2.33E-95 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 Pfam PF00912 Transglycosylase 64 244 5.8E-51 T 20-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 Gene3D G3DSA:3.40.710.10 245 337 7.3E-100 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 Gene3D G3DSA:3.40.710.10 409 703 7.3E-100 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS11660 1d00f0c2f4337813fee55bc524721421 749 SUPERFAMILY SSF53955 55 273 2.11E-60 T 20-04-2016 IPR023346 Lysozyme-like domain APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 Gene3D G3DSA:3.40.50.2300 2 158 7.9E-33 T 20-04-2016 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 Pfam PF00072 Response regulator receiver domain 5 115 1.3E-23 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 210 3.7E-17 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 SUPERFAMILY SSF52172 1 131 3.27E-29 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 8.6E-11 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 8.6E-11 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 8.6E-11 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 PANTHER PTHR26402 3 214 3.7E-58 T 20-04-2016 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 SMART SM00421 153 210 1.5E-16 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 PANTHER PTHR26402:SF151 3 214 3.7E-58 T 20-04-2016 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 SUPERFAMILY SSF46894 144 216 1.26E-17 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 Gene3D G3DSA:1.10.10.10 159 216 1.8E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13515 60764024b3d3d9ba90b95a8b9129536c 216 SMART SM00448 3 117 6.2E-25 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 Gene3D G3DSA:2.60.40.10 354 471 7.7E-14 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 353 470 1.4E-18 T 20-04-2016 IPR032879 FixG, C-terminal immunoglobulin-like domain APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 Pfam PF13746 4Fe-4S dicluster domain 214 323 1.3E-42 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 PANTHER PTHR30176 12 353 3.0E-79 T 20-04-2016 APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 SUPERFAMILY SSF54862 169 351 2.62E-22 T 20-04-2016 APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 SUPERFAMILY SSF54862 100 120 2.62E-22 T 20-04-2016 APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 PANTHER PTHR30176:SF2 12 353 3.0E-79 T 20-04-2016 APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 270 281 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 Gene3D G3DSA:1.10.1060.10 218 278 2.2E-10 T 20-04-2016 APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 Gene3D G3DSA:3.30.70.20 279 339 4.9E-7 T 20-04-2016 APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 34 458 1.2E-128 T 20-04-2016 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021 APS56_RS07890 3fdeb8625d5d646ff9364b593017c5c4 474 Pfam PF12801 4Fe-4S binding domain 89 137 4.1E-14 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS03495 3e6e1448eb96cfb7c22577c28d5c7a04 343 PANTHER PTHR31377:SF0 3 342 2.5E-109 T 20-04-2016 APS56_RS03495 3e6e1448eb96cfb7c22577c28d5c7a04 343 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 3 341 3.1E-109 T 20-04-2016 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 APS56_RS03495 3e6e1448eb96cfb7c22577c28d5c7a04 343 Gene3D G3DSA:3.75.10.10 2 342 1.8E-115 T 20-04-2016 APS56_RS03495 3e6e1448eb96cfb7c22577c28d5c7a04 343 PANTHER PTHR31377 3 342 2.5E-109 T 20-04-2016 APS56_RS03495 3e6e1448eb96cfb7c22577c28d5c7a04 343 SUPERFAMILY SSF55909 3 342 2.68E-112 T 20-04-2016 APS56_RS15265 85bc49cebafc0076c96c89862bc76ffd 53 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 20-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15265 85bc49cebafc0076c96c89862bc76ffd 53 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 6.5E-22 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15265 85bc49cebafc0076c96c89862bc76ffd 53 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 27 3.0E-6 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15265 85bc49cebafc0076c96c89862bc76ffd 53 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 15.853 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15265 85bc49cebafc0076c96c89862bc76ffd 53 Pfam PF00468 Ribosomal protein L34 3 45 7.5E-23 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15265 85bc49cebafc0076c96c89862bc76ffd 53 PANTHER PTHR14503 1 47 2.2E-22 T 20-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS07090 9adc904451e81c08a8cfb5f705d34b92 114 SUPERFAMILY SSF50249 6 113 1.54E-39 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS07090 9adc904451e81c08a8cfb5f705d34b92 114 Gene3D G3DSA:2.40.50.140 3 113 2.8E-40 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS07090 9adc904451e81c08a8cfb5f705d34b92 114 PANTHER PTHR10302 6 113 7.9E-38 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS07090 9adc904451e81c08a8cfb5f705d34b92 114 PIRSF PIRSF002070 1 114 3.3E-36 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS07090 9adc904451e81c08a8cfb5f705d34b92 114 Hamap MF_00984 Single-stranded DNA-binding protein. 5 112 30.256 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS07090 9adc904451e81c08a8cfb5f705d34b92 114 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 111 3.1E-37 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS07090 9adc904451e81c08a8cfb5f705d34b92 114 Pfam PF00436 Single-strand binding protein family 6 107 2.4E-34 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APS56_RS01835 44ca5b97e95770869821361f3b0ae3dc 263 PANTHER PTHR10108 70 231 6.5E-48 T 20-04-2016 APS56_RS01835 44ca5b97e95770869821361f3b0ae3dc 263 PANTHER PTHR10108:SF924 70 231 6.5E-48 T 20-04-2016 APS56_RS01835 44ca5b97e95770869821361f3b0ae3dc 263 SUPERFAMILY SSF53335 67 225 1.3E-38 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01835 44ca5b97e95770869821361f3b0ae3dc 263 Pfam PF13847 Methyltransferase domain 69 195 4.0E-34 T 20-04-2016 IPR025714 Methyltransferase domain APS56_RS01835 44ca5b97e95770869821361f3b0ae3dc 263 Gene3D G3DSA:3.40.50.150 67 223 3.7E-44 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS15170 00fd070194f48000846752ea23e58fab 433 Gene3D G3DSA:1.20.1250.20 6 205 2.2E-45 T 20-04-2016 APS56_RS15170 00fd070194f48000846752ea23e58fab 433 Gene3D G3DSA:1.20.1250.20 231 426 8.7E-26 T 20-04-2016 APS56_RS15170 00fd070194f48000846752ea23e58fab 433 Pfam PF07690 Major Facilitator Superfamily 14 383 7.7E-49 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS15170 00fd070194f48000846752ea23e58fab 433 PANTHER PTHR11662 7 428 3.7E-110 T 20-04-2016 APS56_RS15170 00fd070194f48000846752ea23e58fab 433 SUPERFAMILY SSF103473 4 428 3.53E-78 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS15170 00fd070194f48000846752ea23e58fab 433 PANTHER PTHR11662:SF277 7 428 3.7E-110 T 20-04-2016 APS56_RS04560 7156851ea98f7f9267d63435c2808f9c 339 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 262 339 1.7E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS11830 1a47eafccee45f8756c9a6f3e4e16fb4 437 SUPERFAMILY SSF101960 20 429 4.97E-108 T 20-04-2016 APS56_RS11830 1a47eafccee45f8756c9a6f3e4e16fb4 437 PANTHER PTHR30508:SF0 24 436 2.1E-116 T 20-04-2016 APS56_RS11830 1a47eafccee45f8756c9a6f3e4e16fb4 437 PANTHER PTHR30508 24 436 2.1E-116 T 20-04-2016 APS56_RS11830 1a47eafccee45f8756c9a6f3e4e16fb4 437 Pfam PF01458 Uncharacterized protein family (UPF0051) 181 404 6.1E-77 T 20-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APS56_RS11830 1a47eafccee45f8756c9a6f3e4e16fb4 437 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 145 420 7.0E-86 T 20-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 APS56_RS10735 4db3c3a8a03d18783bd03d1ebe1197b9 435 PANTHER PTHR36932:SF2 29 378 8.9E-36 T 20-04-2016 APS56_RS10735 4db3c3a8a03d18783bd03d1ebe1197b9 435 PANTHER PTHR36932 29 378 8.9E-36 T 20-04-2016 APS56_RS10735 4db3c3a8a03d18783bd03d1ebe1197b9 435 SUPERFAMILY SSF56801 92 348 6.93E-14 T 20-04-2016 APS56_RS01520 a6c1e5ae0f61ef2eafc9d8e1ad516db8 222 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 36 208 2.5E-25 T 20-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APS56_RS01520 a6c1e5ae0f61ef2eafc9d8e1ad516db8 222 SUPERFAMILY SSF53098 29 208 9.18E-44 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS01520 a6c1e5ae0f61ef2eafc9d8e1ad516db8 222 PANTHER PTHR30231 1 220 4.3E-35 T 20-04-2016 APS56_RS01520 a6c1e5ae0f61ef2eafc9d8e1ad516db8 222 Pfam PF00929 Exonuclease 38 199 8.3E-28 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APS56_RS01520 a6c1e5ae0f61ef2eafc9d8e1ad516db8 222 SMART SM00479 36 208 7.0E-37 T 20-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APS56_RS01520 a6c1e5ae0f61ef2eafc9d8e1ad516db8 222 Gene3D G3DSA:3.30.420.10 32 209 1.1E-42 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS02105 4aee8141bf8b77122b2733e0cf42c2d1 259 Pfam PF02563 Polysaccharide biosynthesis/export protein 55 139 1.5E-17 T 20-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APS56_RS02105 4aee8141bf8b77122b2733e0cf42c2d1 259 Gene3D G3DSA:3.30.1950.10 58 135 2.1E-17 T 20-04-2016 APS56_RS02105 4aee8141bf8b77122b2733e0cf42c2d1 259 Pfam PF10531 SLBB domain 144 191 4.0E-9 T 20-04-2016 IPR019554 Soluble ligand binding domain APS56_RS02105 4aee8141bf8b77122b2733e0cf42c2d1 259 PANTHER PTHR33619 88 254 2.9E-40 T 20-04-2016 APS56_RS02105 4aee8141bf8b77122b2733e0cf42c2d1 259 Gene3D G3DSA:3.10.560.10 136 223 1.5E-15 T 20-04-2016 APS56_RS02300 124e0b6ae5b399166e76714e230b17a0 194 Pfam PF08281 Sigma-70, region 4 130 169 2.6E-11 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS02300 124e0b6ae5b399166e76714e230b17a0 194 Gene3D G3DSA:1.10.10.10 123 187 5.2E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02300 124e0b6ae5b399166e76714e230b17a0 194 PANTHER PTHR30173 1 188 1.0E-40 T 20-04-2016 APS56_RS02300 124e0b6ae5b399166e76714e230b17a0 194 Gene3D G3DSA:1.10.1740.10 4 105 2.6E-25 T 20-04-2016 APS56_RS02300 124e0b6ae5b399166e76714e230b17a0 194 Pfam PF04542 Sigma-70 region 2 26 95 3.7E-14 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS02300 124e0b6ae5b399166e76714e230b17a0 194 SUPERFAMILY SSF88659 119 186 5.98E-14 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS02300 124e0b6ae5b399166e76714e230b17a0 194 SUPERFAMILY SSF88946 4 100 1.26E-23 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS02300 124e0b6ae5b399166e76714e230b17a0 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 183 4.8E-26 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 86 1.1E-10 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 SMART SM00345 27 86 1.4E-12 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 SUPERFAMILY SSF46785 19 90 1.06E-14 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 PANTHER PTHR11751:SF10 116 493 8.3E-87 T 20-04-2016 APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 Gene3D G3DSA:3.40.640.10 165 380 2.7E-53 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 Gene3D G3DSA:1.10.10.10 17 87 3.8E-19 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 Pfam PF00155 Aminotransferase class I and II 166 447 1.5E-14 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 PANTHER PTHR11751 116 493 8.3E-87 T 20-04-2016 APS56_RS08950 886c24e8b7c4e08a48302e88fda0fd81 493 SUPERFAMILY SSF53383 126 489 1.27E-73 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 Gene3D G3DSA:2.160.20.10 27 517 3.3E-76 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SMART SM00710 306 330 3800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SMART SM00710 284 305 3400.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SMART SM00710 382 407 1600.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SMART SM00710 38 60 4500.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SMART SM00710 331 361 820.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SMART SM00710 220 253 1700.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SMART SM00710 131 150 3600.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 Pfam PF14592 Chondroitinase B 37 408 3.6E-56 T 20-04-2016 APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SUPERFAMILY SSF49785 659 798 1.38E-10 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 815 888 6.1E-11 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 Pfam PF13004 Putative binding domain, N-terminal 567 626 8.6E-7 T 20-04-2016 IPR024361 Bacteroidetes-Associated Carbohydrate-binding Often N-terminal KEGG: 00040+3.2.1.15|KEGG: 00500+3.2.1.15|MetaCyc: PWY-1081|UniPathway: UPA00326 APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 SUPERFAMILY SSF51126 37 479 3.35E-58 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS07995 ffe28b3b98d43077285930a60b726b5f 891 Gene3D G3DSA:2.60.120.260 650 799 1.2E-11 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 PANTHER PTHR30146:SF29 1 348 7.3E-61 T 20-04-2016 APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 SUPERFAMILY SSF47413 1 57 7.88E-12 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 SUPERFAMILY SSF53822 59 343 1.45E-35 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 Gene3D G3DSA:1.10.260.40 1 57 4.7E-17 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 8.3E-12 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 Gene3D G3DSA:3.40.50.2300 58 181 6.5E-18 T 20-04-2016 APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 SMART SM00354 1 71 1.4E-17 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 PANTHER PTHR30146 1 348 7.3E-61 T 20-04-2016 APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 Pfam PF13407 Periplasmic binding protein domain 69 325 7.4E-34 T 20-04-2016 IPR025997 Periplasmic binding protein APS56_RS14995 5c20bab5d4fe93438bb2bd006553da64 359 Gene3D G3DSA:3.40.50.2300 182 335 3.8E-25 T 20-04-2016 APS56_RS15305 9677d8ecfd2d15520f5718ddd1ebb8f2 341 Gene3D G3DSA:1.10.3470.10 5 338 2.8E-98 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APS56_RS15305 9677d8ecfd2d15520f5718ddd1ebb8f2 341 SUPERFAMILY SSF81345 6 335 4.05E-74 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APS56_RS15305 9677d8ecfd2d15520f5718ddd1ebb8f2 341 PANTHER PTHR30472:SF32 9 341 2.0E-114 T 20-04-2016 APS56_RS15305 9677d8ecfd2d15520f5718ddd1ebb8f2 341 Pfam PF01032 FecCD transport family 16 335 1.6E-83 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APS56_RS15305 9677d8ecfd2d15520f5718ddd1ebb8f2 341 PANTHER PTHR30472 9 341 2.0E-114 T 20-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APS56_RS10855 49babce8b49a080d541e8d0e9ff4b155 60 Pfam PF02416 mttA/Hcf106 family 10 59 3.5E-19 T 20-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APS56_RS10855 49babce8b49a080d541e8d0e9ff4b155 60 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 10 54 4.7E-20 T 20-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APS56_RS10855 49babce8b49a080d541e8d0e9ff4b155 60 PANTHER PTHR33162 10 60 1.1E-15 T 20-04-2016 APS56_RS10855 49babce8b49a080d541e8d0e9ff4b155 60 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 7 60 18.949 T 20-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 SUPERFAMILY SSF56988 236 316 1.15E-7 T 20-04-2016 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 Pfam PF01055 Glycosyl hydrolases family 31 332 761 4.6E-123 T 20-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 SUPERFAMILY SSF51011 678 756 6.19E-20 T 20-04-2016 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 PANTHER PTHR22762:SF86 315 835 4.9E-194 T 20-04-2016 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 PANTHER PTHR22762:SF86 28 188 4.9E-194 T 20-04-2016 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 PANTHER PTHR22762 315 835 4.9E-194 T 20-04-2016 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 SUPERFAMILY SSF51445 341 674 2.11E-58 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 PANTHER PTHR22762 28 188 4.9E-194 T 20-04-2016 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 SUPERFAMILY SSF74650 13 189 9.73E-23 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 Pfam PF17137 Domain of unknown function (DUF5110) 777 833 5.3E-13 T 20-04-2016 IPR033403 Domain of unknown function DUF5110 APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 Gene3D G3DSA:3.90.182.10 236 299 5.4E-4 T 20-04-2016 IPR011658 PA14 domain APS56_RS06005 b53db29e5a32f7d96590f55ea925c145 863 Pfam PF16338 Domain of unknown function (DUF4968) 19 107 2.7E-7 T 20-04-2016 IPR032513 Alpha-glucosidase, domain of unknown function DUF4968 APS56_RS05295 9b13c8877cb3b08d7d6327aea3fc95da 254 SUPERFAMILY SSF53335 39 187 3.16E-20 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS05505 904d7dde79af0843871a14b2b8d06640 136 SUPERFAMILY SSF55620 1 135 4.61E-47 T 20-04-2016 APS56_RS05505 904d7dde79af0843871a14b2b8d06640 136 Gene3D G3DSA:3.30.479.10 1 135 4.6E-45 T 20-04-2016 APS56_RS05505 904d7dde79af0843871a14b2b8d06640 136 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 135 3.8E-36 T 20-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APS56_RS05505 904d7dde79af0843871a14b2b8d06640 136 PIRSF PIRSF006113 1 136 1.6E-21 T 20-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APS56_RS05505 904d7dde79af0843871a14b2b8d06640 136 PANTHER PTHR12589 1 133 3.0E-50 T 20-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APS56_RS16500 0ee3cc3bcb1a40a21e03f8cd2b0b954d 630 SUPERFAMILY SSF55486 239 453 3.22E-10 T 20-04-2016 APS56_RS16500 0ee3cc3bcb1a40a21e03f8cd2b0b954d 630 Gene3D G3DSA:2.30.42.10 536 601 8.4E-8 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS16500 0ee3cc3bcb1a40a21e03f8cd2b0b954d 630 Pfam PF05299 M61 glycyl aminopeptidase 318 425 6.8E-14 T 20-04-2016 IPR007963 Peptidase M61, catalytic domain APS56_RS16500 0ee3cc3bcb1a40a21e03f8cd2b0b954d 630 SUPERFAMILY SSF50156 532 597 1.2E-7 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 Gene3D G3DSA:2.160.10.10 3 184 4.1E-53 T 20-04-2016 APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 SUPERFAMILY SSF51161 3 254 5.76E-78 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 102 136 9.4E-12 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 29 63 3.4E-8 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 4 28 0.0011 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 PIRSF PIRSF000456 1 261 2.9E-99 T 20-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 4 254 1.0E-96 T 20-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 173 254 1.1E-25 T 20-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 PANTHER PTHR23416:SF8 4 247 2.3E-109 T 20-04-2016 APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 PANTHER PTHR23416 4 247 2.3E-109 T 20-04-2016 APS56_RS02025 acd06584c13dd532e674fbbfa694fd9f 261 Gene3D G3DSA:1.20.1180.10 190 255 5.6E-21 T 20-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APS56_RS00350 2e65f4b557b514405e15b1a1d87768dc 213 PANTHER PTHR14239:SF11 1 195 2.5E-28 T 20-04-2016 APS56_RS00350 2e65f4b557b514405e15b1a1d87768dc 213 Gene3D G3DSA:3.40.50.720 1 186 4.1E-43 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00350 2e65f4b557b514405e15b1a1d87768dc 213 PANTHER PTHR14239 1 195 2.5E-28 T 20-04-2016 APS56_RS00350 2e65f4b557b514405e15b1a1d87768dc 213 SUPERFAMILY SSF51735 1 194 5.1E-32 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00350 2e65f4b557b514405e15b1a1d87768dc 213 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 94 8.9E-18 T 20-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APS56_RS16460 fd872740be53e2ef130af95a073cabcf 78 PIRSF PIRSF037031 2 78 1.7E-29 T 20-04-2016 IPR005243 Redox-active disulphide protein 2 APS56_RS16460 fd872740be53e2ef130af95a073cabcf 78 PANTHER PTHR36450 3 78 1.4E-25 T 20-04-2016 APS56_RS16460 fd872740be53e2ef130af95a073cabcf 78 SUPERFAMILY SSF52833 3 77 5.04E-18 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS16460 fd872740be53e2ef130af95a073cabcf 78 Gene3D G3DSA:3.40.30.10 4 78 6.2E-27 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS16460 fd872740be53e2ef130af95a073cabcf 78 Pfam PF13192 Thioredoxin domain 5 78 1.3E-25 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS16460 fd872740be53e2ef130af95a073cabcf 78 PANTHER PTHR36450:SF1 3 78 1.4E-25 T 20-04-2016 APS56_RS16460 fd872740be53e2ef130af95a073cabcf 78 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 4 78 7.8E-25 T 20-04-2016 IPR005243 Redox-active disulphide protein 2 APS56_RS01700 e4a3171955587af0a07dee5bffa90911 306 Pfam PF11751 Protein of unknown function (DUF3308) 21 291 4.4E-87 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS01700 e4a3171955587af0a07dee5bffa90911 306 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 8 293 9.3E-82 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS12625 392f0335e454ee61eab4c3f0cc80de3d 467 SUPERFAMILY SSF51556 4 466 8.84E-177 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS12625 392f0335e454ee61eab4c3f0cc80de3d 467 Gene3D G3DSA:3.20.20.140 6 46 4.9E-149 T 20-04-2016 APS56_RS12625 392f0335e454ee61eab4c3f0cc80de3d 467 Gene3D G3DSA:3.20.20.140 140 467 4.9E-149 T 20-04-2016 APS56_RS12625 392f0335e454ee61eab4c3f0cc80de3d 467 PANTHER PTHR30068:SF4 4 467 9.7E-228 T 20-04-2016 APS56_RS12625 392f0335e454ee61eab4c3f0cc80de3d 467 PANTHER PTHR30068 4 467 9.7E-228 T 20-04-2016 APS56_RS12625 392f0335e454ee61eab4c3f0cc80de3d 467 Pfam PF02614 Glucuronate isomerase 4 465 7.7E-208 T 20-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APS56_RS12625 392f0335e454ee61eab4c3f0cc80de3d 467 Gene3D G3DSA:1.10.2020.10 48 137 1.1E-38 T 20-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APS56_RS12625 392f0335e454ee61eab4c3f0cc80de3d 467 Hamap MF_00675 Uronate isomerase [uxaC]. 4 467 47.261 T 20-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APS56_RS09525 48e5bc88cee7b0f0961e9cf88dd01f19 249 PANTHER PTHR30269 7 249 2.2E-42 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APS56_RS09525 48e5bc88cee7b0f0961e9cf88dd01f19 249 Pfam PF01925 Sulfite exporter TauE/SafE 17 244 4.2E-25 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APS56_RS09525 48e5bc88cee7b0f0961e9cf88dd01f19 249 PANTHER PTHR30269:SF24 7 249 2.2E-42 T 20-04-2016 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 Gene3D G3DSA:3.30.1120.10 417 479 2.6E-11 T 20-04-2016 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 Pfam PF00884 Sulfatase 24 393 8.4E-53 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 PANTHER PTHR10342 187 260 3.7E-117 T 20-04-2016 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 Gene3D G3DSA:3.40.720.10 21 411 1.4E-86 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 PANTHER PTHR10342 282 480 3.7E-117 T 20-04-2016 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 PANTHER PTHR10342 1 168 3.7E-117 T 20-04-2016 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 PANTHER PTHR10342:SF207 282 480 3.7E-117 T 20-04-2016 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 PANTHER PTHR10342:SF207 1 168 3.7E-117 T 20-04-2016 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 SUPERFAMILY SSF53649 23 479 1.89E-102 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS05910 c156ce8c48437aedc8becfa09bd1dfe1 488 PANTHER PTHR10342:SF207 187 260 3.7E-117 T 20-04-2016 APS56_RS16065 b9f9b6c70c3c562a2b96eff6e3c644fa 640 Pfam PF13175 AAA ATPase domain 1 380 4.0E-56 T 20-04-2016 APS56_RS16065 b9f9b6c70c3c562a2b96eff6e3c644fa 640 Gene3D G3DSA:3.40.50.300 1 147 9.4E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16065 b9f9b6c70c3c562a2b96eff6e3c644fa 640 Gene3D G3DSA:3.40.50.300 241 404 9.4E-31 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16065 b9f9b6c70c3c562a2b96eff6e3c644fa 640 SUPERFAMILY SSF52540 227 395 6.75E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16065 b9f9b6c70c3c562a2b96eff6e3c644fa 640 SUPERFAMILY SSF52540 1 143 6.75E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 Gene3D G3DSA:3.40.47.10 3 164 1.2E-57 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 4 327 62.155 T 20-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 Gene3D G3DSA:3.40.47.10 165 328 3.9E-46 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 240 327 6.6E-30 T 20-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 188 1.2E-29 T 20-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 PANTHER PTHR34069:SF2 2 333 6.0E-122 T 20-04-2016 APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 SUPERFAMILY SSF53901 8 327 4.01E-63 T 20-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 PANTHER PTHR34069 2 333 6.0E-122 T 20-04-2016 APS56_RS11185 e7198a5667abdd74868ba7d13583374f 333 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 5 326 4.2E-107 T 20-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APS56_RS12985 a031b54a4114f6aa7ee586e6c45f44f6 2433 TIGRFAM TIGR04189 surface_SprA: cell surface protein SprA 48 2432 0.0 T 20-04-2016 IPR026377 Cell surface SprA APS56_RS12985 a031b54a4114f6aa7ee586e6c45f44f6 2433 Gene3D G3DSA:1.10.238.10 1371 1414 7.8E-4 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS12985 a031b54a4114f6aa7ee586e6c45f44f6 2433 Pfam PF14349 Motility related/secretion protein 1132 1640 1.0E-126 T 20-04-2016 IPR025684 Gliding motility protein SprA N-terminal domain APS56_RS12985 a031b54a4114f6aa7ee586e6c45f44f6 2433 Pfam PF14349 Motility related/secretion protein 58 459 1.4E-65 T 20-04-2016 IPR025684 Gliding motility protein SprA N-terminal domain APS56_RS03560 683c9220676a976dedbc8ab68cc493ac 287 Gene3D G3DSA:3.40.50.1580 22 287 4.8E-74 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APS56_RS03560 683c9220676a976dedbc8ab68cc493ac 287 Pfam PF01048 Phosphorylase superfamily 29 262 5.6E-33 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APS56_RS03560 683c9220676a976dedbc8ab68cc493ac 287 PANTHER PTHR21234:SF8 10 287 6.4E-51 T 20-04-2016 APS56_RS03560 683c9220676a976dedbc8ab68cc493ac 287 SUPERFAMILY SSF53167 15 284 1.44E-46 T 20-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APS56_RS03560 683c9220676a976dedbc8ab68cc493ac 287 PANTHER PTHR21234 10 287 6.4E-51 T 20-04-2016 IPR018017 Nucleoside phosphorylase APS56_RS09545 ad22272d564d024a35464e9f171d9b06 197 SUPERFAMILY SSF101874 71 196 1.75E-5 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS12790 db297dd9cefd161f99928687660e3684 394 Pfam PF06969 HemN C-terminal domain 297 348 7.4E-9 T 20-04-2016 IPR010723 HemN, C-terminal APS56_RS12790 db297dd9cefd161f99928687660e3684 394 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 349 8.1E-85 T 20-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- APS56_RS12790 db297dd9cefd161f99928687660e3684 394 PANTHER PTHR13932:SF5 3 353 4.1E-123 T 20-04-2016 APS56_RS12790 db297dd9cefd161f99928687660e3684 394 PANTHER PTHR13932:SF5 374 393 4.1E-123 T 20-04-2016 APS56_RS12790 db297dd9cefd161f99928687660e3684 394 SMART SM00729 1 219 9.2E-45 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS12790 db297dd9cefd161f99928687660e3684 394 SUPERFAMILY SSF102114 3 392 6.8E-97 T 20-04-2016 APS56_RS12790 db297dd9cefd161f99928687660e3684 394 PANTHER PTHR13932 3 353 4.1E-123 T 20-04-2016 APS56_RS12790 db297dd9cefd161f99928687660e3684 394 PANTHER PTHR13932 374 393 4.1E-123 T 20-04-2016 APS56_RS12790 db297dd9cefd161f99928687660e3684 394 Gene3D G3DSA:3.80.30.20 4 235 7.7E-33 T 20-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APS56_RS12790 db297dd9cefd161f99928687660e3684 394 Pfam PF04055 Radical SAM superfamily 6 173 1.9E-16 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS05135 9b9935c1d6ebdf022a595cb6e5eaae1b 95 Pfam PF02699 Preprotein translocase subunit 7 82 1.1E-24 T 20-04-2016 IPR003849 Preprotein translocase YajC APS56_RS05135 9b9935c1d6ebdf022a595cb6e5eaae1b 95 PANTHER PTHR33909:SF1 7 81 2.4E-17 T 20-04-2016 APS56_RS05135 9b9935c1d6ebdf022a595cb6e5eaae1b 95 PANTHER PTHR33909 7 81 2.4E-17 T 20-04-2016 APS56_RS05135 9b9935c1d6ebdf022a595cb6e5eaae1b 95 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 4 83 8.4E-22 T 20-04-2016 IPR003849 Preprotein translocase YajC APS56_RS05135 9b9935c1d6ebdf022a595cb6e5eaae1b 95 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 3.1E-12 T 20-04-2016 IPR003849 Preprotein translocase YajC APS56_RS05135 9b9935c1d6ebdf022a595cb6e5eaae1b 95 PRINTS PR01853 Bacterial YajC preprotein translocase signature 42 60 3.1E-12 T 20-04-2016 IPR003849 Preprotein translocase YajC APS56_RS05135 9b9935c1d6ebdf022a595cb6e5eaae1b 95 SMART SM01323 2 85 2.6E-28 T 20-04-2016 IPR003849 Preprotein translocase YajC APS56_RS00140 cd8b82edbf93d5d64218734c4ec2e072 380 PANTHER PTHR23514:SF13 6 379 4.8E-88 T 20-04-2016 APS56_RS00140 cd8b82edbf93d5d64218734c4ec2e072 380 PANTHER PTHR23514 6 379 4.8E-88 T 20-04-2016 APS56_RS00140 cd8b82edbf93d5d64218734c4ec2e072 380 SUPERFAMILY SSF103473 3 378 6.67E-43 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS00140 cd8b82edbf93d5d64218734c4ec2e072 380 Pfam PF07690 Major Facilitator Superfamily 21 262 3.1E-16 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS00140 cd8b82edbf93d5d64218734c4ec2e072 380 Gene3D G3DSA:1.20.1250.20 199 378 7.1E-16 T 20-04-2016 APS56_RS00140 cd8b82edbf93d5d64218734c4ec2e072 380 Gene3D G3DSA:1.20.1250.20 4 186 2.8E-18 T 20-04-2016 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 SUPERFAMILY SSF52304 3 137 1.7E-52 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 Gene3D G3DSA:3.40.50.9100 3 137 1.8E-55 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 20-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 138 56.084 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 Pfam PF01220 Dehydroquinase class II 3 137 2.2E-52 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 136 6.2E-52 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 PIRSF PIRSF001399 1 138 7.9E-55 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 PANTHER PTHR21272 1 135 2.3E-69 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS03305 fb29dedfe970a1d31cef0a76bfa942c8 138 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 18 138 5.0E-39 T 20-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APS56_RS01355 1b7f3980d4a2c56b1ea486a4f3df172a 112 Pfam PF11015 Protein of unknown function (DUF2853) 10 110 2.1E-46 T 20-04-2016 IPR021274 Protein of unknown function DUF2853 APS56_RS01355 1b7f3980d4a2c56b1ea486a4f3df172a 112 Gene3D G3DSA:1.10.238.120 1 112 6.4E-54 T 20-04-2016 IPR023154 Jann4075-like domain APS56_RS01355 1b7f3980d4a2c56b1ea486a4f3df172a 112 SUPERFAMILY SSF158587 1 112 4.84E-49 T 20-04-2016 IPR023154 Jann4075-like domain APS56_RS16145 957e09a0bf6ec4d74a13d22c7299c64a 127 SUPERFAMILY SSF54593 5 126 1.65E-15 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS16145 957e09a0bf6ec4d74a13d22c7299c64a 127 PANTHER PTHR33993 4 127 3.0E-42 T 20-04-2016 APS56_RS16145 957e09a0bf6ec4d74a13d22c7299c64a 127 PANTHER PTHR33993:SF4 4 127 3.0E-42 T 20-04-2016 APS56_RS16145 957e09a0bf6ec4d74a13d22c7299c64a 127 Gene3D G3DSA:3.10.180.10 7 126 3.3E-29 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS16105 56c8dd2c463d067ccba98d179a62ce1f 176 PANTHER PTHR21485 6 169 1.2E-41 T 20-04-2016 APS56_RS16105 56c8dd2c463d067ccba98d179a62ce1f 176 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 16 165 6.5E-45 T 20-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APS56_RS16105 56c8dd2c463d067ccba98d179a62ce1f 176 Gene3D G3DSA:3.40.50.1000 4 166 3.1E-39 T 20-04-2016 IPR023214 HAD-like domain APS56_RS16105 56c8dd2c463d067ccba98d179a62ce1f 176 SUPERFAMILY SSF56784 11 168 2.71E-36 T 20-04-2016 IPR023214 HAD-like domain APS56_RS16105 56c8dd2c463d067ccba98d179a62ce1f 176 PIRSF PIRSF006118 1 175 2.9E-57 T 20-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APS56_RS16105 56c8dd2c463d067ccba98d179a62ce1f 176 Pfam PF08282 haloacid dehalogenase-like hydrolase 81 153 5.0E-9 T 20-04-2016 IPR023214 HAD-like domain APS56_RS13345 0505c931c770d58fa202430743f37f47 190 Gene3D G3DSA:2.60.120.10 3 154 1.2E-27 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS13345 0505c931c770d58fa202430743f37f47 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 101 8.6E-9 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS13345 0505c931c770d58fa202430743f37f47 190 PANTHER PTHR24567 32 190 3.0E-26 T 20-04-2016 APS56_RS13345 0505c931c770d58fa202430743f37f47 190 PANTHER PTHR24567:SF33 32 190 3.0E-26 T 20-04-2016 APS56_RS13345 0505c931c770d58fa202430743f37f47 190 SUPERFAMILY SSF51206 9 122 2.36E-16 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS04610 51d53e167e510839228c24d67d88b0fd 405 SUPERFAMILY SSF75005 47 313 1.64E-15 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS04610 51d53e167e510839228c24d67d88b0fd 405 Gene3D G3DSA:2.115.10.20 49 278 1.4E-11 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 PANTHER PTHR36999 345 538 7.7E-48 T 20-04-2016 APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 PANTHER PTHR36999 557 606 7.7E-48 T 20-04-2016 APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 221 3.3E-10 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 Gene3D G3DSA:2.60.40.1120 26 99 3.3E-14 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 SUPERFAMILY SSF49464 24 109 1.12E-15 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 Pfam PF13715 CarboxypepD_reg-like domain 27 111 7.9E-18 T 20-04-2016 APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 SUPERFAMILY SSF56935 500 791 3.37E-70 T 20-04-2016 APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 SUPERFAMILY SSF56935 107 457 3.37E-70 T 20-04-2016 APS56_RS00065 aadcdb586400d0b5e850d2b2137f47a8 791 Gene3D G3DSA:2.170.130.10 106 221 1.4E-7 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 PANTHER PTHR11596:SF5 50 398 4.9E-76 T 20-04-2016 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 SMART SM00098 54 395 1.5E-26 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 PRINTS PR00113 Alkaline phosphatase signature 141 161 7.4E-30 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 PRINTS PR00113 Alkaline phosphatase signature 104 119 7.4E-30 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 PRINTS PR00113 Alkaline phosphatase signature 53 73 7.4E-30 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 PRINTS PR00113 Alkaline phosphatase signature 260 289 7.4E-30 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 Gene3D G3DSA:3.40.720.10 33 394 2.3E-94 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 ProSitePatterns PS00123 Alkaline phosphatase active site. 104 112 - T 20-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 PANTHER PTHR11596 50 398 4.9E-76 T 20-04-2016 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 Pfam PF00245 Alkaline phosphatase 353 392 8.3E-6 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 Pfam PF00245 Alkaline phosphatase 54 337 2.2E-57 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS15025 fae43f002665cacc693f0c955b2cd84f 398 SUPERFAMILY SSF53649 44 393 9.29E-93 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS14785 b85504725ca7ae239f9cd78118bc5a3d 329 Pfam PF02449 Beta-galactosidase 57 108 1.4E-5 T 20-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APS56_RS14785 b85504725ca7ae239f9cd78118bc5a3d 329 SUPERFAMILY SSF51445 52 213 4.11E-7 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS14785 b85504725ca7ae239f9cd78118bc5a3d 329 Gene3D G3DSA:3.20.20.80 56 169 2.7E-6 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 PANTHER PTHR11702 3 332 2.4E-145 T 20-04-2016 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 PANTHER PTHR11702:SF3 3 332 2.4E-145 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 164 324 2.1E-12 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 Gene3D G3DSA:3.40.50.300 159 331 5.9E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 Hamap MF_01454 GTPase Obg [obg]. 5 331 44.624 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 SUPERFAMILY SSF82051 5 161 9.29E-51 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 SUPERFAMILY SSF52540 155 331 3.83E-47 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 Pfam PF01018 GTP1/OBG 6 161 8.1E-57 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 165 185 1.9E-33 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 231 249 1.9E-33 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 186 204 1.9E-33 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 214 229 1.9E-33 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 6 330 6.1E-130 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 ProSitePatterns PS00905 GTP1/OBG family signature. 216 229 - T 20-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 Pfam PF01926 50S ribosome-binding GTPase 164 280 1.3E-21 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 PIRSF PIRSF002401 3 332 1.2E-127 T 20-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APS56_RS06550 24b5652b0270cd100b14868a3e4c7e08 332 Gene3D G3DSA:2.70.210.12 5 158 2.0E-53 T 20-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APS56_RS11695 b63a2c2a365495cedd8579f91e11b329 286 SUPERFAMILY SSF51197 7 256 3.71E-59 T 20-04-2016 APS56_RS11695 b63a2c2a365495cedd8579f91e11b329 286 Pfam PF13621 Cupin-like domain 18 227 8.0E-29 T 20-04-2016 APS56_RS11695 b63a2c2a365495cedd8579f91e11b329 286 PANTHER PTHR12461 7 223 7.0E-40 T 20-04-2016 APS56_RS11695 b63a2c2a365495cedd8579f91e11b329 286 Gene3D G3DSA:2.60.120.650 8 234 8.5E-36 T 20-04-2016 APS56_RS14770 3d85716f92e15f76a1d7c6ed736775f2 396 Gene3D G3DSA:3.90.1150.10 275 394 4.7E-29 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS14770 3d85716f92e15f76a1d7c6ed736775f2 396 PANTHER PTHR11751 11 392 5.4E-145 T 20-04-2016 APS56_RS14770 3d85716f92e15f76a1d7c6ed736775f2 396 SUPERFAMILY SSF53383 1 392 5.28E-95 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS14770 3d85716f92e15f76a1d7c6ed736775f2 396 Pfam PF00155 Aminotransferase class I and II 34 346 1.5E-52 T 20-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APS56_RS14770 3d85716f92e15f76a1d7c6ed736775f2 396 PANTHER PTHR11751:SF404 11 392 5.4E-145 T 20-04-2016 APS56_RS14770 3d85716f92e15f76a1d7c6ed736775f2 396 Gene3D G3DSA:3.40.640.10 45 274 2.0E-66 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS14770 3d85716f92e15f76a1d7c6ed736775f2 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 20-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APS56_RS13500 f614e22738ca0ca5c71d1f3da026ef01 634 SUPERFAMILY SSF50998 159 184 3.3E-12 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS13500 f614e22738ca0ca5c71d1f3da026ef01 634 SUPERFAMILY SSF50998 33 96 3.3E-12 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS13500 f614e22738ca0ca5c71d1f3da026ef01 634 SUPERFAMILY SSF50998 273 449 3.3E-12 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS13500 f614e22738ca0ca5c71d1f3da026ef01 634 Pfam PF13360 PQQ-like domain 306 442 2.5E-7 T 20-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APS56_RS13500 f614e22738ca0ca5c71d1f3da026ef01 634 Gene3D G3DSA:2.140.10.10 47 349 8.4E-12 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APS56_RS13500 f614e22738ca0ca5c71d1f3da026ef01 634 Gene3D G3DSA:2.140.10.10 388 442 8.4E-12 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 Gene3D G3DSA:3.30.1120.10 446 513 1.8E-12 T 20-04-2016 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 Gene3D G3DSA:3.40.720.10 36 196 1.3E-96 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 Gene3D G3DSA:3.40.720.10 234 432 1.3E-96 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 SUPERFAMILY SSF53649 36 513 1.6E-115 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 ProSitePatterns PS00523 Sulfatases signature 1. 85 97 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 Pfam PF16385 Domain of unknown function 417 509 1.5E-27 T 20-04-2016 IPR032158 Domain of unknown function DUF4994 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 ProSitePatterns PS00149 Sulfatases signature 2. 132 142 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 PANTHER PTHR10342 243 339 2.4E-120 T 20-04-2016 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 PANTHER PTHR10342 3 198 2.4E-120 T 20-04-2016 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 PANTHER PTHR10342 356 517 2.4E-120 T 20-04-2016 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 Pfam PF00884 Sulfatase 39 411 7.7E-61 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 PANTHER PTHR10342:SF22 243 339 2.4E-120 T 20-04-2016 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 PANTHER PTHR10342:SF22 3 198 2.4E-120 T 20-04-2016 APS56_RS04615 b28e1a29e5633a6bf5f7e73dfc2204d9 528 PANTHER PTHR10342:SF22 356 517 2.4E-120 T 20-04-2016 APS56_RS14810 e5f83f1a2c5aad335378183504430538 312 Pfam PF02274 Amidinotransferase 10 308 5.0E-77 T 20-04-2016 APS56_RS14810 e5f83f1a2c5aad335378183504430538 312 SUPERFAMILY SSF55909 5 305 4.71E-42 T 20-04-2016 APS56_RS14810 e5f83f1a2c5aad335378183504430538 312 PANTHER PTHR12737 3 312 6.4E-94 T 20-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APS56_RS14810 e5f83f1a2c5aad335378183504430538 312 PIRSF PIRSF028188 1 311 2.3E-114 T 20-04-2016 IPR014541 Predicted amidinotransferase, FN0238 type APS56_RS14810 e5f83f1a2c5aad335378183504430538 312 PANTHER PTHR12737:SF21 3 312 6.4E-94 T 20-04-2016 APS56_RS14810 e5f83f1a2c5aad335378183504430538 312 Gene3D G3DSA:3.75.10.10 7 304 2.2E-18 T 20-04-2016 APS56_RS01955 0310f2681bb783236cb4732ed32e5523 271 SMART SM00244 24 189 2.6E-12 T 20-04-2016 IPR001107 Band 7 domain APS56_RS01955 0310f2681bb783236cb4732ed32e5523 271 PANTHER PTHR10264 12 242 5.3E-23 T 20-04-2016 IPR001972 Stomatin family GO:0016020 APS56_RS01955 0310f2681bb783236cb4732ed32e5523 271 Pfam PF01145 SPFH domain / Band 7 family 28 210 9.8E-25 T 20-04-2016 IPR001107 Band 7 domain APS56_RS01955 0310f2681bb783236cb4732ed32e5523 271 SUPERFAMILY SSF117892 61 194 3.27E-20 T 20-04-2016 IPR001107 Band 7 domain APS56_RS01955 0310f2681bb783236cb4732ed32e5523 271 PANTHER PTHR10264:SF78 12 242 5.3E-23 T 20-04-2016 APS56_RS13255 c6600cc4d07dca6bdac311bc85dc255f 179 Pfam PF00588 SpoU rRNA Methylase family 25 167 1.7E-31 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APS56_RS13255 c6600cc4d07dca6bdac311bc85dc255f 179 SUPERFAMILY SSF75217 10 173 9.16E-37 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS13255 c6600cc4d07dca6bdac311bc85dc255f 179 Gene3D G3DSA:3.40.1280.10 18 174 3.2E-42 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS13255 c6600cc4d07dca6bdac311bc85dc255f 179 PANTHER PTHR12029 6 177 3.7E-78 T 20-04-2016 APS56_RS13255 c6600cc4d07dca6bdac311bc85dc255f 179 PANTHER PTHR12029:SF60 6 177 3.7E-78 T 20-04-2016 APS56_RS12295 e4b9aaaa9de7934870bb772d1d16b5a3 537 Pfam PF13205 Bacterial Ig-like domain 33 135 1.9E-16 T 20-04-2016 IPR032812 SbsA, Ig-like domain APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 Pfam PF13239 2TM domain 20 105 2.7E-21 T 20-04-2016 IPR025698 2TM domain APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 PANTHER PTHR22778 147 306 9.1E-45 T 20-04-2016 APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 Gene3D G3DSA:3.40.430.10 145 305 1.2E-60 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 PRINTS PR00070 Dihydrofolate reductase signature 237 251 1.3E-13 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 PRINTS PR00070 Dihydrofolate reductase signature 158 168 1.3E-13 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 PRINTS PR00070 Dihydrofolate reductase signature 185 196 1.3E-13 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 PRINTS PR00070 Dihydrofolate reductase signature 172 180 1.3E-13 T 20-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 PANTHER PTHR22778:SF16 147 306 9.1E-45 T 20-04-2016 APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 SUPERFAMILY SSF53597 147 306 2.42E-57 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APS56_RS08840 034be6f84f5ac12ee791f26ae743760f 306 Pfam PF00186 Dihydrofolate reductase 147 304 1.5E-61 T 20-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APS56_RS16440 972ee68972a203762e38411eb4a23e01 236 PANTHER PTHR31272:SF7 1 232 4.9E-62 T 20-04-2016 APS56_RS16440 972ee68972a203762e38411eb4a23e01 236 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 18 226 6.8E-24 T 20-04-2016 APS56_RS16440 972ee68972a203762e38411eb4a23e01 236 PANTHER PTHR31272 1 232 4.9E-62 T 20-04-2016 APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 377 391 4.6E-9 T 20-04-2016 APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 495 507 4.6E-9 T 20-04-2016 APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 346 362 4.6E-9 T 20-04-2016 APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 Gene3D G3DSA:3.40.50.150 478 646 9.6E-29 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 Gene3D G3DSA:3.40.50.150 348 442 9.6E-29 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 PANTHER PTHR33841 307 448 2.8E-12 T 20-04-2016 APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 PANTHER PTHR33841:SF1 307 448 2.8E-12 T 20-04-2016 APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 498 504 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APS56_RS02745 229d919c2ceafc989bd2c8fc2b14b040 1090 SUPERFAMILY SSF53335 183 693 4.92E-40 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS03680 2a6955b184c28edf8ac793cb46d9e16c 334 Gene3D G3DSA:3.40.1190.20 1 327 2.6E-65 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS03680 2a6955b184c28edf8ac793cb46d9e16c 334 SUPERFAMILY SSF53613 3 322 6.86E-63 T 20-04-2016 IPR029056 Ribokinase-like APS56_RS03680 2a6955b184c28edf8ac793cb46d9e16c 334 PANTHER PTHR10584 1 324 4.3E-76 T 20-04-2016 APS56_RS03680 2a6955b184c28edf8ac793cb46d9e16c 334 Pfam PF00294 pfkB family carbohydrate kinase 1 311 1.1E-27 T 20-04-2016 IPR011611 Carbohydrate kinase PfkB APS56_RS03680 2a6955b184c28edf8ac793cb46d9e16c 334 PANTHER PTHR10584:SF203 1 324 4.3E-76 T 20-04-2016 APS56_RS10705 1b3c9c84ea9587c5bf16b7643ccdbed8 325 Gene3D G3DSA:3.40.50.2000 160 324 1.3E-28 T 20-04-2016 APS56_RS10705 1b3c9c84ea9587c5bf16b7643ccdbed8 325 Gene3D G3DSA:3.40.50.2000 1 135 1.8E-17 T 20-04-2016 APS56_RS10705 1b3c9c84ea9587c5bf16b7643ccdbed8 325 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 59 267 1.7E-22 T 20-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APS56_RS10705 1b3c9c84ea9587c5bf16b7643ccdbed8 325 SUPERFAMILY SSF53756 1 325 1.63E-56 T 20-04-2016 APS56_RS10705 1b3c9c84ea9587c5bf16b7643ccdbed8 325 PANTHER PTHR30160 1 324 2.4E-40 T 20-04-2016 APS56_RS10705 1b3c9c84ea9587c5bf16b7643ccdbed8 325 PANTHER PTHR30160:SF7 1 324 2.4E-40 T 20-04-2016 APS56_RS16400 0c1bf10f2a88ebb6881bc01cec17edc8 272 PIRSF PIRSF000094 3 264 1.4E-45 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APS56_RS16400 0c1bf10f2a88ebb6881bc01cec17edc8 272 PANTHER PTHR24322 163 196 1.7E-19 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS16400 0c1bf10f2a88ebb6881bc01cec17edc8 272 PANTHER PTHR24322 15 147 1.7E-19 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS16400 0c1bf10f2a88ebb6881bc01cec17edc8 272 SUPERFAMILY SSF51735 7 258 3.96E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS16400 0c1bf10f2a88ebb6881bc01cec17edc8 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 256 7.1E-55 T 20-04-2016 APS56_RS16400 0c1bf10f2a88ebb6881bc01cec17edc8 272 PANTHER PTHR24322:SF317 163 196 1.7E-19 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APS56_RS16400 0c1bf10f2a88ebb6881bc01cec17edc8 272 PANTHER PTHR24322:SF317 15 147 1.7E-19 T 20-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APS56_RS16400 0c1bf10f2a88ebb6881bc01cec17edc8 272 Gene3D G3DSA:3.40.50.720 8 206 2.3E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02115 31ad700eb5685aaffc765baa0a86c3c3 363 Gene3D G3DSA:3.40.640.10 1 239 1.5E-91 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS02115 31ad700eb5685aaffc765baa0a86c3c3 363 SUPERFAMILY SSF53383 4 361 1.21E-94 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS02115 31ad700eb5685aaffc765baa0a86c3c3 363 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 4 357 2.7E-89 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS02115 31ad700eb5685aaffc765baa0a86c3c3 363 Gene3D G3DSA:3.90.1150.10 241 362 5.0E-39 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS02115 31ad700eb5685aaffc765baa0a86c3c3 363 PIRSF PIRSF000390 1 363 6.4E-99 T 20-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APS56_RS02115 31ad700eb5685aaffc765baa0a86c3c3 363 PANTHER PTHR30244 1 363 3.8E-129 T 20-04-2016 APS56_RS02115 31ad700eb5685aaffc765baa0a86c3c3 363 PANTHER PTHR30244:SF18 1 363 3.8E-129 T 20-04-2016 APS56_RS05735 3efa73f5b1951126929cc78f8ec3faa8 296 SUPERFAMILY SSF53448 1 260 4.29E-27 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05735 3efa73f5b1951126929cc78f8ec3faa8 296 PANTHER PTHR22916 1 202 1.7E-13 T 20-04-2016 APS56_RS05735 3efa73f5b1951126929cc78f8ec3faa8 296 Pfam PF00535 Glycosyl transferase family 2 3 157 3.3E-16 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS05735 3efa73f5b1951126929cc78f8ec3faa8 296 Gene3D G3DSA:3.90.550.10 2 229 3.2E-20 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05735 3efa73f5b1951126929cc78f8ec3faa8 296 PANTHER PTHR22916:SF34 1 202 1.7E-13 T 20-04-2016 APS56_RS15085 7a9cc51273e58e7cb555fbc670be8c73 757 Pfam PF07940 Heparinase II/III-like protein 408 664 3.7E-30 T 20-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 APS56_RS15085 7a9cc51273e58e7cb555fbc670be8c73 757 Pfam PF05426 Alginate lyase 109 335 3.0E-20 T 20-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 APS56_RS15085 7a9cc51273e58e7cb555fbc670be8c73 757 Gene3D G3DSA:1.50.10.110 40 389 2.2E-67 T 20-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 APS56_RS15085 7a9cc51273e58e7cb555fbc670be8c73 757 SUPERFAMILY SSF48230 270 352 2.65E-50 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS15085 7a9cc51273e58e7cb555fbc670be8c73 757 SUPERFAMILY SSF48230 81 243 2.65E-50 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 PANTHER PTHR23293 244 301 3.7E-75 T 20-04-2016 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 PANTHER PTHR23293 177 210 3.7E-75 T 20-04-2016 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 PANTHER PTHR23293 1 157 3.7E-75 T 20-04-2016 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 301 1.9E-128 T 20-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 PANTHER PTHR23293:SF6 244 301 3.7E-75 T 20-04-2016 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 PANTHER PTHR23293:SF6 177 210 3.7E-75 T 20-04-2016 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 PANTHER PTHR23293:SF6 1 157 3.7E-75 T 20-04-2016 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 256 1.6E-51 T 20-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 PIRSF PIRSF002936 1 301 1.6E-132 T 20-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 SUPERFAMILY SSF52402 1 209 6.05E-66 T 20-04-2016 APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 Gene3D G3DSA:3.40.50.620 243 251 2.4E-54 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS07405 921bef76c4b1a8cd5ceecc088dd7b611 301 Gene3D G3DSA:3.40.50.620 4 209 2.4E-54 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS00045 0fcc1fa05a8956db74731c45c0619618 484 PANTHER PTHR30026 1 484 6.6E-64 T 20-04-2016 APS56_RS00045 0fcc1fa05a8956db74731c45c0619618 484 Pfam PF02321 Outer membrane efflux protein 280 466 1.9E-15 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS00045 0fcc1fa05a8956db74731c45c0619618 484 Pfam PF02321 Outer membrane efflux protein 25 257 1.3E-10 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS00045 0fcc1fa05a8956db74731c45c0619618 484 Gene3D G3DSA:1.20.1600.10 124 466 4.1E-47 T 20-04-2016 APS56_RS00045 0fcc1fa05a8956db74731c45c0619618 484 Gene3D G3DSA:1.20.1600.10 16 80 4.1E-47 T 20-04-2016 APS56_RS00045 0fcc1fa05a8956db74731c45c0619618 484 SUPERFAMILY SSF56954 5 74 9.29E-58 T 20-04-2016 APS56_RS00045 0fcc1fa05a8956db74731c45c0619618 484 SUPERFAMILY SSF56954 121 466 9.29E-58 T 20-04-2016 APS56_RS00045 0fcc1fa05a8956db74731c45c0619618 484 PANTHER PTHR30026:SF7 1 484 6.6E-64 T 20-04-2016 APS56_RS10820 5129ac010087cc31c06f404550363951 182 Gene3D G3DSA:2.60.120.10 2 180 2.1E-75 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS10820 5129ac010087cc31c06f404550363951 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 5 178 5.0E-53 T 20-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APS56_RS10820 5129ac010087cc31c06f404550363951 182 SUPERFAMILY SSF51182 1 180 7.51E-71 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS10820 5129ac010087cc31c06f404550363951 182 PANTHER PTHR21047 1 182 2.3E-70 T 20-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APS56_RS10820 5129ac010087cc31c06f404550363951 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 178 1.0E-70 T 20-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APS56_RS10820 5129ac010087cc31c06f404550363951 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 177 6.8E-71 T 20-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APS56_RS10820 5129ac010087cc31c06f404550363951 182 PANTHER PTHR21047:SF2 1 182 2.3E-70 T 20-04-2016 APS56_RS15490 bc802a45c68be541160fc164674121c3 512 SUPERFAMILY SSF56935 229 511 3.05E-16 T 20-04-2016 APS56_RS15490 bc802a45c68be541160fc164674121c3 512 SUPERFAMILY SSF56935 36 126 3.05E-16 T 20-04-2016 APS56_RS15490 bc802a45c68be541160fc164674121c3 512 Gene3D G3DSA:2.40.160.60 34 154 3.0E-56 T 20-04-2016 APS56_RS15490 bc802a45c68be541160fc164674121c3 512 Gene3D G3DSA:2.40.160.60 229 511 3.0E-56 T 20-04-2016 APS56_RS15490 bc802a45c68be541160fc164674121c3 512 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 247 510 2.3E-12 T 20-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) APS56_RS12595 6c4ba72b1ea72a7d3cdec96d56075bc8 401 Gene3D G3DSA:2.40.50.100 59 93 6.3E-16 T 20-04-2016 APS56_RS12595 6c4ba72b1ea72a7d3cdec96d56075bc8 401 Gene3D G3DSA:2.40.50.100 168 199 6.3E-16 T 20-04-2016 APS56_RS12595 6c4ba72b1ea72a7d3cdec96d56075bc8 401 PANTHER PTHR30572 1 302 2.2E-87 T 20-04-2016 APS56_RS12595 6c4ba72b1ea72a7d3cdec96d56075bc8 401 PANTHER PTHR30572:SF1 1 302 2.2E-87 T 20-04-2016 APS56_RS12595 6c4ba72b1ea72a7d3cdec96d56075bc8 401 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 46 280 5.1E-28 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APS56_RS12595 6c4ba72b1ea72a7d3cdec96d56075bc8 401 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 370 6.5E-52 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APS56_RS12595 6c4ba72b1ea72a7d3cdec96d56075bc8 401 SUPERFAMILY SSF111369 48 284 5.75E-27 T 20-04-2016 APS56_RS05985 fb12097630dd817f27fa94299f0699bd 450 Gene3D G3DSA:2.160.20.10 265 332 4.4E-12 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS05985 fb12097630dd817f27fa94299f0699bd 450 Gene3D G3DSA:2.160.20.10 27 231 4.4E-12 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS05985 fb12097630dd817f27fa94299f0699bd 450 SUPERFAMILY SSF51126 179 232 1.12E-12 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS05985 fb12097630dd817f27fa94299f0699bd 450 SUPERFAMILY SSF51126 33 126 1.12E-12 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS05985 fb12097630dd817f27fa94299f0699bd 450 SUPERFAMILY SSF51126 264 339 1.12E-12 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS07330 1f250013893976c6d5ffe960df93ad1c 298 SMART SM00382 27 205 1.5E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS07330 1f250013893976c6d5ffe960df93ad1c 298 SUPERFAMILY SSF52540 3 220 9.65E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07330 1f250013893976c6d5ffe960df93ad1c 298 Gene3D G3DSA:3.40.50.300 2 220 1.6E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07330 1f250013893976c6d5ffe960df93ad1c 298 Pfam PF00005 ABC transporter 18 157 5.8E-31 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS07330 1f250013893976c6d5ffe960df93ad1c 298 PANTHER PTHR24220:SF160 4 232 2.0E-83 T 20-04-2016 APS56_RS07330 1f250013893976c6d5ffe960df93ad1c 298 PANTHER PTHR24220 4 232 2.0E-83 T 20-04-2016 APS56_RS07330 1f250013893976c6d5ffe960df93ad1c 298 TIGRFAM TIGR03522 GldA_ABC_ATP: gliding motility-associated ABC transporter ATP-binding subunit GldA 1 296 1.7E-136 T 20-04-2016 IPR019864 Gliding motility-associated ABC transporter ATP-binding subunit GldA APS56_RS12250 794c1cc4b3e4d8ec62e2179bbf5f02f1 306 SUPERFAMILY SSF103481 186 299 2.48E-6 T 20-04-2016 APS56_RS12250 794c1cc4b3e4d8ec62e2179bbf5f02f1 306 PANTHER PTHR12715 6 301 5.6E-43 T 20-04-2016 APS56_RS12250 794c1cc4b3e4d8ec62e2179bbf5f02f1 306 Pfam PF00892 EamA-like transporter family 7 139 9.0E-24 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS12250 794c1cc4b3e4d8ec62e2179bbf5f02f1 306 Pfam PF00892 EamA-like transporter family 152 296 8.6E-14 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS12250 794c1cc4b3e4d8ec62e2179bbf5f02f1 306 SUPERFAMILY SSF103481 44 143 3.53E-15 T 20-04-2016 APS56_RS14640 9292a426662d3c841a39bff8e677dd7d 118 PANTHER PTHR33993 4 116 6.5E-37 T 20-04-2016 APS56_RS14640 9292a426662d3c841a39bff8e677dd7d 118 PANTHER PTHR33993:SF1 4 116 6.5E-37 T 20-04-2016 APS56_RS14640 9292a426662d3c841a39bff8e677dd7d 118 SUPERFAMILY SSF54593 13 117 1.93E-16 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS14640 9292a426662d3c841a39bff8e677dd7d 118 Gene3D G3DSA:3.10.180.10 13 117 9.3E-20 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS07735 bec3b5c36a0d491bff3779d23acb7128 194 Pfam PF04264 YceI-like domain 49 192 7.3E-15 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS07735 bec3b5c36a0d491bff3779d23acb7128 194 SUPERFAMILY SSF101874 27 193 6.67E-19 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS07735 bec3b5c36a0d491bff3779d23acb7128 194 Gene3D G3DSA:2.40.128.110 27 193 2.7E-19 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS07735 bec3b5c36a0d491bff3779d23acb7128 194 SMART SM00867 29 194 2.4E-4 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 SUPERFAMILY SSF81464 73 153 1.8E-14 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 PANTHER PTHR22888 308 348 8.1E-42 T 20-04-2016 APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 PANTHER PTHR22888 31 267 8.1E-42 T 20-04-2016 APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 SUPERFAMILY SSF49503 312 348 4.59E-33 T 20-04-2016 IPR008972 Cupredoxin APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 SUPERFAMILY SSF49503 163 271 4.59E-33 T 20-04-2016 IPR008972 Cupredoxin APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 Gene3D G3DSA:2.60.40.420 165 271 1.9E-33 T 20-04-2016 IPR008972 Cupredoxin APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 Gene3D G3DSA:2.60.40.420 312 346 1.9E-33 T 20-04-2016 IPR008972 Cupredoxin APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 Gene3D G3DSA:1.10.287.90 74 153 7.2E-17 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 73 150 2.1E-8 T 20-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 PANTHER PTHR22888:SF2 308 348 8.1E-42 T 20-04-2016 APS56_RS12930 d8296281598d9bb14c260219f6e91214 355 PANTHER PTHR22888:SF2 31 267 8.1E-42 T 20-04-2016 APS56_RS05895 f502c615156c6178982011ee5df84e59 285 Gene3D G3DSA:3.90.850.10 62 281 8.5E-88 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS05895 f502c615156c6178982011ee5df84e59 285 PANTHER PTHR11820 1 278 3.9E-132 T 20-04-2016 APS56_RS05895 f502c615156c6178982011ee5df84e59 285 SUPERFAMILY SSF56529 63 280 6.28E-80 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS05895 f502c615156c6178982011ee5df84e59 285 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 75 277 3.2E-67 T 20-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APS56_RS05895 f502c615156c6178982011ee5df84e59 285 PANTHER PTHR11820:SF71 1 278 3.9E-132 T 20-04-2016 APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 Gene3D G3DSA:3.40.50.300 1 270 2.1E-52 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 Gene3D G3DSA:3.40.50.300 316 530 3.4E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 Pfam PF12848 ABC transporter 222 294 3.2E-18 T 20-04-2016 IPR032781 ABC-transporter extension domain APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 Pfam PF00005 ABC transporter 357 467 6.4E-8 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 Pfam PF00005 ABC transporter 18 182 6.2E-25 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 SUPERFAMILY SSF52540 2 235 2.82E-46 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 SUPERFAMILY SSF52540 379 514 3.37E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 SUPERFAMILY SSF52540 230 288 3.37E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 SMART SM00382 26 229 7.4E-11 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 PANTHER PTHR19211:SF38 1 541 4.4E-291 T 20-04-2016 APS56_RS01070 4d1c9b6d4f1e9c21623ee530a732db13 541 PANTHER PTHR19211 1 541 4.4E-291 T 20-04-2016 APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 4 121 9.5E-25 T 20-04-2016 IPR026992 Non-haem dioxygenase N-terminal domain APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 176 274 2.2E-12 T 20-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 PANTHER PTHR10209 4 310 1.7E-80 T 20-04-2016 APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 Gene3D G3DSA:2.60.120.330 4 308 1.9E-82 T 20-04-2016 IPR027443 Isopenicillin N synthase-like APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 SUPERFAMILY SSF51197 4 310 1.03E-79 T 20-04-2016 APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 PRINTS PR00682 Isopenicillin N synthase signature 27 44 2.3E-6 T 20-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 PRINTS PR00682 Isopenicillin N synthase signature 230 256 2.3E-6 T 20-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 PRINTS PR00682 Isopenicillin N synthase signature 194 215 2.3E-6 T 20-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 PRINTS PR00682 Isopenicillin N synthase signature 299 315 2.3E-6 T 20-04-2016 IPR002283 Isopenicillin N synthase GO:0005506|GO:0016491|GO:0055114 APS56_RS03545 376971e98aed8ed949b6e18242cb7048 315 PANTHER PTHR10209:SF146 4 310 1.7E-80 T 20-04-2016 APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 Pfam PF01120 Alpha-L-fucosidase 25 315 1.4E-75 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 SMART SM00812 25 366 7.2E-71 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 Gene3D G3DSA:3.20.20.80 23 317 9.2E-83 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 SUPERFAMILY SSF51445 30 317 4.14E-83 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 PANTHER PTHR10030 27 380 2.2E-57 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 PIRSF PIRSF001092 22 425 3.8E-83 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 PRINTS PR00741 Glycosyl hydrolase family 29 signature 268 289 5.4E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 PRINTS PR00741 Glycosyl hydrolase family 29 signature 301 323 5.4E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10065 e3f64e357c819b7068c4504de5e13428 435 PRINTS PR00741 Glycosyl hydrolase family 29 signature 99 115 5.4E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS08810 49b3f1032793d2939143e0dde10ac7bf 248 Gene3D G3DSA:3.40.50.620 1 246 1.8E-63 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS08810 49b3f1032793d2939143e0dde10ac7bf 248 Pfam PF01012 Electron transfer flavoprotein domain 26 205 1.5E-35 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APS56_RS08810 49b3f1032793d2939143e0dde10ac7bf 248 SUPERFAMILY SSF52402 1 242 1.17E-58 T 20-04-2016 APS56_RS08810 49b3f1032793d2939143e0dde10ac7bf 248 SMART SM00893 23 212 9.1E-35 T 20-04-2016 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: REACT_6305 APS56_RS08810 49b3f1032793d2939143e0dde10ac7bf 248 PIRSF PIRSF000090 1 248 6.0E-50 T 20-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APS56_RS08810 49b3f1032793d2939143e0dde10ac7bf 248 PANTHER PTHR21294:SF0 1 248 4.1E-54 T 20-04-2016 APS56_RS08810 49b3f1032793d2939143e0dde10ac7bf 248 PANTHER PTHR21294 1 248 4.1E-54 T 20-04-2016 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 APS56_RS14435 4628be593f9fb5c023e7ef2d7e77b064 161 PANTHER PTHR21058 18 159 8.3E-60 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS14435 4628be593f9fb5c023e7ef2d7e77b064 161 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 22 157 1.5E-45 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS14435 4628be593f9fb5c023e7ef2d7e77b064 161 SUPERFAMILY SSF52121 16 159 3.14E-51 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS14435 4628be593f9fb5c023e7ef2d7e77b064 161 Gene3D G3DSA:3.40.50.960 10 159 1.2E-56 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS14435 4628be593f9fb5c023e7ef2d7e77b064 161 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 22 158 6.7E-53 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS14435 4628be593f9fb5c023e7ef2d7e77b064 161 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 17 161 25.904 T 20-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APS56_RS05390 901943ca96a23b33fc966ff55525ad3b 281 PANTHER PTHR30413:SF8 17 279 1.6E-48 T 20-04-2016 APS56_RS05390 901943ca96a23b33fc966ff55525ad3b 281 PANTHER PTHR30413 17 279 1.6E-48 T 20-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APS56_RS05390 901943ca96a23b33fc966ff55525ad3b 281 Pfam PF01061 ABC-2 type transporter 35 232 1.0E-16 T 20-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APS56_RS07985 22edcaf22ee91ac498e19c48f893425e 243 Pfam PF00149 Calcineurin-like phosphoesterase 1 192 8.4E-17 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS07985 22edcaf22ee91ac498e19c48f893425e 243 PRINTS PR00114 Serine/threonine phosphatase family signature 109 135 3.4E-7 T 20-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 APS56_RS07985 22edcaf22ee91ac498e19c48f893425e 243 PRINTS PR00114 Serine/threonine phosphatase family signature 31 58 3.4E-7 T 20-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 APS56_RS07985 22edcaf22ee91ac498e19c48f893425e 243 PRINTS PR00114 Serine/threonine phosphatase family signature 2 29 3.4E-7 T 20-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 APS56_RS07985 22edcaf22ee91ac498e19c48f893425e 243 SUPERFAMILY SSF56300 1 221 1.41E-37 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS07985 22edcaf22ee91ac498e19c48f893425e 243 Gene3D G3DSA:3.60.21.10 1 228 6.4E-42 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS07985 22edcaf22ee91ac498e19c48f893425e 243 PANTHER PTHR24032:SF31 2 222 1.4E-22 T 20-04-2016 APS56_RS07985 22edcaf22ee91ac498e19c48f893425e 243 PANTHER PTHR24032 2 222 1.4E-22 T 20-04-2016 APS56_RS09655 b88a431fa04b73c56cf938da8ef6c786 110 SUPERFAMILY SSF51445 2 46 1.39E-12 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS09655 b88a431fa04b73c56cf938da8ef6c786 110 PANTHER PTHR10030 1 52 1.0E-16 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS09655 b88a431fa04b73c56cf938da8ef6c786 110 Gene3D G3DSA:3.20.20.80 1 46 1.7E-15 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS09655 b88a431fa04b73c56cf938da8ef6c786 110 Pfam PF01120 Alpha-L-fucosidase 1 43 6.4E-13 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10315 e4ae6cead82f461ecc7ac21a60c29417 127 Gene3D G3DSA:3.10.50.30 45 125 4.4E-18 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APS56_RS10315 e4ae6cead82f461ecc7ac21a60c29417 127 SUPERFAMILY SSF54534 47 123 8.5E-13 T 20-04-2016 APS56_RS10315 e4ae6cead82f461ecc7ac21a60c29417 127 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 48 122 1.6E-15 T 20-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 Gene3D G3DSA:3.40.50.720 19 258 5.1E-48 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 23 40 7.6E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 100 111 7.6E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 7.6E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 226 7.6E-9 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 PANTHER PTHR24320:SF45 10 311 4.9E-94 T 20-04-2016 APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 PANTHER PTHR24320 10 311 4.9E-94 T 20-04-2016 APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 Pfam PF00106 short chain dehydrogenase 22 160 6.7E-23 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS09370 f070978182a6c8ad0303baa454ba05a2 316 SUPERFAMILY SSF51735 19 263 6.2E-42 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09680 ba10a20fc1f4717e370b222809923aa0 467 Gene3D G3DSA:2.60.40.1120 33 118 9.4E-5 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS09680 ba10a20fc1f4717e370b222809923aa0 467 Gene3D G3DSA:2.160.20.10 161 426 1.3E-15 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS09680 ba10a20fc1f4717e370b222809923aa0 467 SUPERFAMILY SSF51126 156 426 5.41E-17 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09680 ba10a20fc1f4717e370b222809923aa0 467 Pfam PF13715 CarboxypepD_reg-like domain 35 113 1.5E-8 T 20-04-2016 APS56_RS09680 ba10a20fc1f4717e370b222809923aa0 467 SUPERFAMILY SSF49464 31 95 1.44E-5 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS08880 d85a635578dbcfab8d2742772e2bac0e 452 SUPERFAMILY SSF141571 160 318 4.81E-5 T 20-04-2016 APS56_RS08880 d85a635578dbcfab8d2742772e2bac0e 452 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 207 309 1.5E-37 T 20-04-2016 IPR005046 Protein of unknown function DUF285 APS56_RS08880 d85a635578dbcfab8d2742772e2bac0e 452 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 188 199 2.9E-4 T 20-04-2016 IPR011889 Bacterial surface protein 26-residue repeat APS56_RS08880 d85a635578dbcfab8d2742772e2bac0e 452 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 150 174 9.9E-6 T 20-04-2016 IPR011889 Bacterial surface protein 26-residue repeat APS56_RS08880 d85a635578dbcfab8d2742772e2bac0e 452 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 225 249 6.6E-6 T 20-04-2016 IPR011889 Bacterial surface protein 26-residue repeat APS56_RS08880 d85a635578dbcfab8d2742772e2bac0e 452 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 250 271 1.8E-5 T 20-04-2016 IPR011889 Bacterial surface protein 26-residue repeat APS56_RS08880 d85a635578dbcfab8d2742772e2bac0e 452 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 383 452 9.3E-15 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS04885 1f18c15aa772359c71dc28bbf3b3b7ee 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 52 273 2.9E-23 T 20-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APS56_RS04885 1f18c15aa772359c71dc28bbf3b3b7ee 358 SUPERFAMILY SSF111369 52 278 2.35E-28 T 20-04-2016 APS56_RS04885 1f18c15aa772359c71dc28bbf3b3b7ee 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 36 357 6.1E-65 T 20-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APS56_RS04885 1f18c15aa772359c71dc28bbf3b3b7ee 358 Gene3D G3DSA:2.40.50.100 62 94 6.5E-18 T 20-04-2016 APS56_RS04885 1f18c15aa772359c71dc28bbf3b3b7ee 358 Gene3D G3DSA:2.40.50.100 169 200 6.5E-18 T 20-04-2016 APS56_RS04885 1f18c15aa772359c71dc28bbf3b3b7ee 358 PANTHER PTHR30469 4 358 6.4E-73 T 20-04-2016 APS56_RS04885 1f18c15aa772359c71dc28bbf3b3b7ee 358 PANTHER PTHR30469:SF15 4 358 6.4E-73 T 20-04-2016 APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1521 1589 2.5E-7 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 Gene3D G3DSA:2.60.120.200 724 887 2.0E-29 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 730 885 8.3E-27 T 20-04-2016 APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 SMART SM00560 744 883 2.0E-6 T 20-04-2016 IPR006558 LamG-like jellyroll fold APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 SUPERFAMILY SSF103647 619 684 3.27E-5 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 SUPERFAMILY SSF103647 560 592 1.83E-5 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 Gene3D G3DSA:4.10.1080.10 433 434 1.5E-11 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 Gene3D G3DSA:4.10.1080.10 365 392 1.5E-11 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 Gene3D G3DSA:4.10.1080.10 564 653 1.5E-11 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 SUPERFAMILY SSF49899 724 887 1.37E-30 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS12080 c9c4f7c07adac05e3d04a2d739bd405c 1589 SUPERFAMILY SSF103647 363 392 6.67E-5 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS13970 7b666d057d636604932ef1feb95ce641 135 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 23 127 2.1E-29 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APS56_RS13970 7b666d057d636604932ef1feb95ce641 135 Gene3D G3DSA:3.90.470.10 20 130 1.7E-34 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APS56_RS13970 7b666d057d636604932ef1feb95ce641 135 Pfam PF00237 Ribosomal protein L22p/L17e 25 127 7.4E-27 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APS56_RS13970 7b666d057d636604932ef1feb95ce641 135 PANTHER PTHR13501 8 127 3.4E-31 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APS56_RS13970 7b666d057d636604932ef1feb95ce641 135 SUPERFAMILY SSF54843 16 128 6.15E-33 T 20-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APS56_RS13970 7b666d057d636604932ef1feb95ce641 135 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 18 130 24.152 T 20-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APS56_RS02620 61e6c339444eb27f8008bec26c211635 275 PANTHER PTHR10907 23 166 8.3E-27 T 20-04-2016 APS56_RS02620 61e6c339444eb27f8008bec26c211635 275 Gene3D G3DSA:3.40.50.1820 203 274 5.6E-55 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS02620 61e6c339444eb27f8008bec26c211635 275 Gene3D G3DSA:3.40.50.1820 19 170 5.6E-55 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS02620 61e6c339444eb27f8008bec26c211635 275 Pfam PF00756 Putative esterase 27 258 8.7E-24 T 20-04-2016 IPR000801 Putative esterase APS56_RS02620 61e6c339444eb27f8008bec26c211635 275 SUPERFAMILY SSF53474 19 273 6.22E-43 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS02620 61e6c339444eb27f8008bec26c211635 275 PANTHER PTHR10907:SF33 23 166 8.3E-27 T 20-04-2016 APS56_RS10895 af3757cdcf9daad47288560fbc09f2ac 286 SUPERFAMILY SSF53335 78 251 7.86E-37 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS10895 af3757cdcf9daad47288560fbc09f2ac 286 Pfam PF13489 Methyltransferase domain 76 225 6.5E-24 T 20-04-2016 APS56_RS10895 af3757cdcf9daad47288560fbc09f2ac 286 Gene3D G3DSA:3.40.50.150 83 253 1.0E-39 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS10895 af3757cdcf9daad47288560fbc09f2ac 286 PANTHER PTHR10108 89 250 6.4E-25 T 20-04-2016 APS56_RS10895 af3757cdcf9daad47288560fbc09f2ac 286 PANTHER PTHR10108:SF779 89 250 6.4E-25 T 20-04-2016 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SMART SM00421 437 494 6.3E-4 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 Pfam PF13181 Tetratricopeptide repeat 70 97 0.0035 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SUPERFAMILY SSF48452 144 248 1.44E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 Gene3D G3DSA:1.10.10.10 437 496 2.8E-8 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SUPERFAMILY SSF46894 437 495 2.14E-10 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 PANTHER PTHR10098 18 248 5.6E-27 T 20-04-2016 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SUPERFAMILY SSF48452 11 177 4.17E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 Pfam PF00196 Bacterial regulatory proteins, luxR family 455 492 2.2E-5 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 Pfam PF13424 Tetratricopeptide repeat 107 174 5.6E-11 T 20-04-2016 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 Pfam PF13424 Tetratricopeptide repeat 186 247 3.4E-10 T 20-04-2016 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SMART SM00028 225 258 280.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SMART SM00028 146 179 4.4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SMART SM00028 66 99 11.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SMART SM00028 185 218 0.024 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SMART SM00028 106 139 9.8 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 SMART SM00028 28 61 21.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 Gene3D G3DSA:1.25.40.10 122 260 3.4E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11920 ec78ec1c877c7a579daeeabc5ce2d294 497 Gene3D G3DSA:1.25.40.10 11 121 3.7E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01380 e51234a0c51bd49985292e109c424a31 121 Pfam PF12728 Helix-turn-helix domain 74 120 1.1E-9 T 20-04-2016 APS56_RS01380 e51234a0c51bd49985292e109c424a31 121 SUPERFAMILY SSF46955 74 118 2.2E-5 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS01380 e51234a0c51bd49985292e109c424a31 121 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 74 112 2.2E-10 T 20-04-2016 IPR010093 SinI-like, DNA-binding domain GO:0003677 APS56_RS05275 26ca20bc0a03a2cbdd27b47428b8cdd7 374 SUPERFAMILY SSF53756 1 369 1.88E-92 T 20-04-2016 APS56_RS05275 26ca20bc0a03a2cbdd27b47428b8cdd7 374 TIGRFAM TIGR03568 NeuC_NnaA: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 3 357 1.9E-128 T 20-04-2016 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing GO:0004553|GO:0006047 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 APS56_RS05275 26ca20bc0a03a2cbdd27b47428b8cdd7 374 Gene3D G3DSA:3.40.50.2000 205 357 3.0E-13 T 20-04-2016 APS56_RS05275 26ca20bc0a03a2cbdd27b47428b8cdd7 374 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 357 6.9E-81 T 20-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APS56_RS05275 26ca20bc0a03a2cbdd27b47428b8cdd7 374 Gene3D G3DSA:3.40.50.2000 1 204 3.6E-51 T 20-04-2016 APS56_RS15035 790f308c6b379b520fef7a5f9478eeed 313 Pfam PF04773 FecR protein 96 191 1.5E-18 T 20-04-2016 IPR006860 FecR protein APS56_RS15035 790f308c6b379b520fef7a5f9478eeed 313 Pfam PF16344 Domain of unknown function (DUF4974) 207 305 3.9E-21 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS15035 790f308c6b379b520fef7a5f9478eeed 313 PANTHER PTHR30273:SF2 15 312 2.6E-67 T 20-04-2016 APS56_RS15035 790f308c6b379b520fef7a5f9478eeed 313 PANTHER PTHR30273 15 312 2.6E-67 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS15140 e426ed422e99390264a8f21a2b88563f 379 SUPERFAMILY SSF51735 2 152 1.61E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15140 e426ed422e99390264a8f21a2b88563f 379 Gene3D G3DSA:3.30.360.10 140 368 4.4E-22 T 20-04-2016 APS56_RS15140 e426ed422e99390264a8f21a2b88563f 379 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 118 1.1E-19 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS15140 e426ed422e99390264a8f21a2b88563f 379 PANTHER PTHR22604 1 207 6.7E-49 T 20-04-2016 APS56_RS15140 e426ed422e99390264a8f21a2b88563f 379 PANTHER PTHR22604 235 368 6.7E-49 T 20-04-2016 APS56_RS15140 e426ed422e99390264a8f21a2b88563f 379 Gene3D G3DSA:3.40.50.720 1 139 2.1E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15140 e426ed422e99390264a8f21a2b88563f 379 SUPERFAMILY SSF55347 129 314 4.58E-20 T 20-04-2016 APS56_RS13235 e755ef1c0d558a4553af8607b8f01cc1 487 Gene3D G3DSA:3.30.70.1450 414 472 7.6E-8 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS13235 e755ef1c0d558a4553af8607b8f01cc1 487 Pfam PF02080 TrkA-C domain 414 473 1.6E-12 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS13235 e755ef1c0d558a4553af8607b8f01cc1 487 PANTHER PTHR32507:SF7 4 473 8.0E-193 T 20-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 APS56_RS13235 e755ef1c0d558a4553af8607b8f01cc1 487 Pfam PF00999 Sodium/hydrogen exchanger family 14 389 1.0E-50 T 20-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APS56_RS13235 e755ef1c0d558a4553af8607b8f01cc1 487 SUPERFAMILY SSF116726 406 473 1.15E-11 T 20-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APS56_RS13235 e755ef1c0d558a4553af8607b8f01cc1 487 PANTHER PTHR32507 4 473 8.0E-193 T 20-04-2016 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SUPERFAMILY SSF48452 151 374 1.64E-26 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 Pfam PF13424 Tetratricopeptide repeat 118 192 4.0E-11 T 20-04-2016 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 Pfam PF07730 Histidine kinase 450 513 2.2E-6 T 20-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SUPERFAMILY SSF81901 52 191 1.07E-12 T 20-04-2016 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 563 613 2.2E-6 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 Gene3D G3DSA:3.30.565.10 545 647 1.5E-8 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 Gene3D G3DSA:1.25.40.10 143 347 5.9E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 Gene3D G3DSA:1.25.40.10 50 142 6.1E-14 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SUPERFAMILY SSF55874 541 646 2.36E-14 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 PANTHER PTHR24421 378 648 2.8E-25 T 20-04-2016 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SMART SM00028 280 313 360.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SMART SM00028 119 152 2.8E-4 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SMART SM00028 240 273 0.87 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SMART SM00028 160 193 4.8E-6 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SMART SM00028 200 233 290.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS13510 56e2b717e7ec9374c52b047f91e556a6 648 SMART SM00028 79 112 0.44 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 238 266 0.21 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 Gene3D G3DSA:2.160.10.10 85 189 3.5E-26 T 20-04-2016 APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 Gene3D G3DSA:2.160.10.10 190 286 3.5E-22 T 20-04-2016 APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 PANTHER PTHR22572:SF117 101 274 8.3E-44 T 20-04-2016 APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 216 244 - T 20-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 PANTHER PTHR22572 101 274 8.3E-44 T 20-04-2016 APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 SUPERFAMILY SSF51161 37 293 1.45E-63 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 27 91 6.4E-11 T 20-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 201 236 1.6E-6 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02015 57272dc3bfa5bf8bd887302f2bec6b0d 312 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 139 2.7E-9 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02500 89c64e980bac61210addac0ea152dbe2 120 SUPERFAMILY SSF159888 1 117 5.1E-10 T 20-04-2016 APS56_RS02500 89c64e980bac61210addac0ea152dbe2 120 Pfam PF08818 Domain of unknown function (DU1801) 17 115 1.3E-7 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 APS56_RS05160 ca9c4214e570753bfa3e913be99af292 111 Gene3D G3DSA:2.40.50.140 3 110 9.8E-36 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS05160 ca9c4214e570753bfa3e913be99af292 111 PANTHER PTHR11586 7 107 1.1E-31 T 20-04-2016 APS56_RS05160 ca9c4214e570753bfa3e913be99af292 111 Pfam PF01588 Putative tRNA binding domain 15 108 2.9E-14 T 20-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APS56_RS05160 ca9c4214e570753bfa3e913be99af292 111 SUPERFAMILY SSF50249 5 110 4.57E-30 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS05160 ca9c4214e570753bfa3e913be99af292 111 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 7 110 3.0E-45 T 20-04-2016 IPR008231 Probable chaperone CsaA APS56_RS14815 210287a13bbc744c505ca71227017737 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 664 1.1E-12 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS14815 210287a13bbc744c505ca71227017737 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 683 1.1E-12 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS14815 210287a13bbc744c505ca71227017737 691 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 625 1.1E-12 T 20-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APS56_RS14815 210287a13bbc744c505ca71227017737 691 Gene3D G3DSA:3.30.565.10 534 688 8.7E-36 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14815 210287a13bbc744c505ca71227017737 691 SUPERFAMILY SSF48452 152 330 4.17E-19 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14815 210287a13bbc744c505ca71227017737 691 Pfam PF13424 Tetratricopeptide repeat 160 229 1.1E-7 T 20-04-2016 APS56_RS14815 210287a13bbc744c505ca71227017737 691 Gene3D G3DSA:1.10.287.130 456 526 1.9E-6 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS14815 210287a13bbc744c505ca71227017737 691 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 579 685 3.6E-21 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14815 210287a13bbc744c505ca71227017737 691 SUPERFAMILY SSF47384 450 528 6.67E-10 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS14815 210287a13bbc744c505ca71227017737 691 SUPERFAMILY SSF48452 39 155 3.04E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14815 210287a13bbc744c505ca71227017737 691 SUPERFAMILY SSF55874 520 686 9.04E-38 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14815 210287a13bbc744c505ca71227017737 691 SMART SM00388 464 530 0.0012 T 20-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APS56_RS14815 210287a13bbc744c505ca71227017737 691 PANTHER PTHR24423 443 690 8.7E-51 T 20-04-2016 APS56_RS14815 210287a13bbc744c505ca71227017737 691 SMART SM00387 574 686 7.0E-28 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS14815 210287a13bbc744c505ca71227017737 691 Gene3D G3DSA:1.25.40.10 49 141 3.3E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14815 210287a13bbc744c505ca71227017737 691 Gene3D G3DSA:1.25.40.10 156 356 6.4E-19 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14815 210287a13bbc744c505ca71227017737 691 SMART SM00028 40 73 64.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14815 210287a13bbc744c505ca71227017737 691 SMART SM00028 200 234 0.61 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14815 210287a13bbc744c505ca71227017737 691 SMART SM00028 279 312 260.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14815 210287a13bbc744c505ca71227017737 691 SMART SM00028 160 193 11.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS14815 210287a13bbc744c505ca71227017737 691 SMART SM00028 80 113 32.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 PANTHER PTHR10174:SF2 64 324 1.8E-68 T 20-04-2016 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 SUPERFAMILY SSF55347 125 311 2.02E-68 T 20-04-2016 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 310 2.3E-42 T 20-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 Gene3D G3DSA:3.40.50.720 1 138 2.6E-57 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 326 5.0E-127 T 20-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 Gene3D G3DSA:3.30.360.10 139 307 1.5E-69 T 20-04-2016 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 115 4.9E-28 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 324 33.002 T 20-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 PANTHER PTHR10174 64 324 1.8E-68 T 20-04-2016 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 SUPERFAMILY SSF51735 1 153 2.52E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 SMART SM00859 2 117 6.6E-34 T 20-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APS56_RS11240 56b1e35cf0f88e37980948a2ebead46d 329 PIRSF PIRSF000148 1 329 6.1E-119 T 20-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS07180 44c22010de9405f7eff2db23d0e3c6e2 518 TIGRFAM TIGR03517 GldM_gliding: gliding motility-associated protein GldM 1 511 4.4E-134 T 20-04-2016 IPR019859 Gliding motility-associated protein GldM APS56_RS07180 44c22010de9405f7eff2db23d0e3c6e2 518 Pfam PF12080 GldM C-terminal domain 332 498 5.9E-47 T 20-04-2016 IPR022719 Gliding motility-associated protein GldM, C-terminal APS56_RS07180 44c22010de9405f7eff2db23d0e3c6e2 518 Pfam PF12081 GldM N-terminal domain 31 219 5.7E-47 T 20-04-2016 IPR022720 Gliding motility-associated protein GldM, N-terminal APS56_RS04265 2937143ed718550c60313c8eda5dd3de 77 PANTHER PTHR37805 1 73 1.5E-28 T 20-04-2016 APS56_RS04265 2937143ed718550c60313c8eda5dd3de 77 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.1E-28 T 20-04-2016 IPR009921 Domain of unknown function DUF1456 APS56_RS04265 2937143ed718550c60313c8eda5dd3de 77 PANTHER PTHR37805:SF1 1 73 1.5E-28 T 20-04-2016 APS56_RS06845 40d06509394edecddf2b1dbe293ee3f2 83 Gene3D G3DSA:3.40.190.10 14 56 8.4E-4 T 20-04-2016 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 Hamap MF_00109 Shikimate kinase [aroK]. 1 173 22.676 T 20-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 Pfam PF01202 Shikimate kinase 9 169 2.3E-41 T 20-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 Gene3D G3DSA:3.40.50.300 1 169 2.6E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 PANTHER PTHR21087:SF0 3 169 2.1E-43 T 20-04-2016 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 PRINTS PR01100 Shikimate kinase family signature 27 40 1.1E-17 T 20-04-2016 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 PRINTS PR01100 Shikimate kinase family signature 74 83 1.1E-17 T 20-04-2016 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 PRINTS PR01100 Shikimate kinase family signature 3 18 1.1E-17 T 20-04-2016 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 PRINTS PR01100 Shikimate kinase family signature 55 63 1.1E-17 T 20-04-2016 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 PRINTS PR01100 Shikimate kinase family signature 97 114 1.1E-17 T 20-04-2016 APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 SUPERFAMILY SSF52540 1 164 8.84E-22 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04065 2295a1904c7a8bb0a5b9a129412a54ac 173 PANTHER PTHR21087 3 169 2.1E-43 T 20-04-2016 APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SMART SM00228 696 762 5.6E-6 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 Gene3D G3DSA:2.30.42.10 682 770 1.0E-12 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 Gene3D G3DSA:2.160.20.10 380 651 1.6E-36 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 Gene3D G3DSA:2.160.20.10 315 348 1.6E-36 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 Gene3D G3DSA:2.160.20.10 3 116 1.6E-36 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SUPERFAMILY SSF51126 380 570 6.57E-47 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SUPERFAMILY SSF51126 607 651 6.57E-47 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SUPERFAMILY SSF51126 292 348 6.57E-47 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SUPERFAMILY SSF51126 2 91 6.57E-47 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SMART SM00710 513 546 9800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SMART SM00710 409 431 13.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SMART SM00710 326 348 21.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SMART SM00710 381 408 2500.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SMART SM00710 302 324 2500.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 Pfam PF13229 Right handed beta helix region 296 448 9.2E-9 T 20-04-2016 APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 PANTHER PTHR36453:SF1 2 427 6.2E-36 T 20-04-2016 APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 SUPERFAMILY SSF50156 682 770 3.94E-11 T 20-04-2016 IPR001478 PDZ domain GO:0005515 APS56_RS09705 75b5a820fec88c10ef87dd6a47e5e417 771 PANTHER PTHR36453 2 427 6.2E-36 T 20-04-2016 APS56_RS12940 ecddaed067d2e966988af4066f33bc5a 1560 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1468 1560 2.0E-12 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS12940 ecddaed067d2e966988af4066f33bc5a 1560 Pfam PF13585 C-terminal domain of CHU protein family 1468 1558 7.9E-24 T 20-04-2016 APS56_RS10225 26d522ef3f8c7cc15eec946ba5e55d53 386 SUPERFAMILY SSF81345 10 272 1.03E-25 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APS56_RS10225 26d522ef3f8c7cc15eec946ba5e55d53 386 Gene3D G3DSA:1.10.3470.10 44 277 1.5E-8 T 20-04-2016 IPR029022 ABC transporter, BtuC-like APS56_RS10225 26d522ef3f8c7cc15eec946ba5e55d53 386 PANTHER PTHR30477 3 305 6.7E-103 T 20-04-2016 APS56_RS10225 26d522ef3f8c7cc15eec946ba5e55d53 386 PANTHER PTHR30477:SF8 3 305 6.7E-103 T 20-04-2016 APS56_RS10225 26d522ef3f8c7cc15eec946ba5e55d53 386 Pfam PF00950 ABC 3 transport family 10 275 3.8E-50 T 20-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 SUPERFAMILY SSF54211 146 304 2.28E-34 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 SUPERFAMILY SSF54211 9 130 6.75E-37 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 326 463 1.6E-49 T 20-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 326 466 30.888 T 20-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 Gene3D G3DSA:3.10.129.10 322 464 3.2E-53 T 20-04-2016 IPR029069 HotDog domain APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 Pfam PF07977 FabA-like domain 335 458 1.2E-30 T 20-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 Gene3D G3DSA:3.30.230.20 9 130 3.5E-42 T 20-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 8 225 1.8E-61 T 20-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 10 304 4.5E-87 T 20-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 PANTHER PTHR30272 260 468 2.3E-99 T 20-04-2016 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 SUPERFAMILY SSF54637 328 463 3.74E-43 T 20-04-2016 IPR029069 HotDog domain APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 Gene3D G3DSA:3.30.1700.10 135 308 1.2E-45 T 20-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APS56_RS02030 1c22b13d76cfade152cf90cfebed6920 468 PANTHER PTHR30272:SF1 260 468 2.3E-99 T 20-04-2016 APS56_RS11930 a8715f27778d8bcba74d4c56b7143bab 340 Pfam PF02333 Phytase 36 324 1.2E-36 T 20-04-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 APS56_RS11930 a8715f27778d8bcba74d4c56b7143bab 340 Gene3D G3DSA:2.120.10.20 20 332 1.4E-77 T 20-04-2016 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 APS56_RS11930 a8715f27778d8bcba74d4c56b7143bab 340 SUPERFAMILY SSF50956 27 328 1.26E-59 T 20-04-2016 APS56_RS11530 ca36ad4de59b85effb7ef2350d6ca085 280 SMART SM00028 102 135 7.8E-6 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11530 ca36ad4de59b85effb7ef2350d6ca085 280 SMART SM00028 65 98 20.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11530 ca36ad4de59b85effb7ef2350d6ca085 280 SMART SM00028 31 64 45.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11530 ca36ad4de59b85effb7ef2350d6ca085 280 SUPERFAMILY SSF48452 29 147 6.07E-19 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11530 ca36ad4de59b85effb7ef2350d6ca085 280 Gene3D G3DSA:1.25.40.10 30 145 5.0E-20 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11530 ca36ad4de59b85effb7ef2350d6ca085 280 PANTHER PTHR23083 34 145 1.4E-13 T 20-04-2016 APS56_RS11530 ca36ad4de59b85effb7ef2350d6ca085 280 Pfam PF13414 TPR repeat 109 145 6.3E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11530 ca36ad4de59b85effb7ef2350d6ca085 280 Pfam PF13432 Tetratricopeptide repeat 37 95 0.014 T 20-04-2016 APS56_RS14360 f51f71b619d4ebed5bae9b23341a33ea 325 Gene3D G3DSA:3.40.50.880 104 317 4.7E-40 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS14360 f51f71b619d4ebed5bae9b23341a33ea 325 Pfam PF06283 Trehalose utilisation 98 299 2.0E-26 T 20-04-2016 IPR029010 ThuA-like domain APS56_RS14360 f51f71b619d4ebed5bae9b23341a33ea 325 SUPERFAMILY SSF52317 29 173 2.52E-36 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS14360 f51f71b619d4ebed5bae9b23341a33ea 325 SUPERFAMILY SSF52317 201 313 2.52E-36 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS11225 4e5aec5d3bc30570d786eb64cab033d4 305 Pfam PF00005 ABC transporter 17 161 4.6E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS11225 4e5aec5d3bc30570d786eb64cab033d4 305 SMART SM00382 26 211 1.2E-16 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS11225 4e5aec5d3bc30570d786eb64cab033d4 305 PANTHER PTHR24220 3 240 1.9E-70 T 20-04-2016 APS56_RS11225 4e5aec5d3bc30570d786eb64cab033d4 305 Gene3D G3DSA:3.40.50.300 1 227 1.7E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11225 4e5aec5d3bc30570d786eb64cab033d4 305 SUPERFAMILY SSF52540 1 240 3.22E-60 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11225 4e5aec5d3bc30570d786eb64cab033d4 305 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS01865 6288de370fe47f108f9ef4588f390109 277 Pfam PF00691 OmpA family 156 256 2.1E-20 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01865 6288de370fe47f108f9ef4588f390109 277 Gene3D G3DSA:3.30.1330.60 136 262 1.6E-30 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01865 6288de370fe47f108f9ef4588f390109 277 SUPERFAMILY SSF103088 139 262 1.7E-28 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS01865 6288de370fe47f108f9ef4588f390109 277 PANTHER PTHR30329 137 263 1.3E-30 T 20-04-2016 APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 PANTHER PTHR10381 13 180 2.1E-85 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 PRINTS PR00127 Clp protease catalytic subunit P signature 101 120 1.6E-41 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 PRINTS PR00127 Clp protease catalytic subunit P signature 158 177 1.6E-41 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 PRINTS PR00127 Clp protease catalytic subunit P signature 10 25 1.6E-41 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 PRINTS PR00127 Clp protease catalytic subunit P signature 49 69 1.6E-41 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 PRINTS PR00127 Clp protease catalytic subunit P signature 80 97 1.6E-41 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 Gene3D G3DSA:3.90.226.10 11 180 2.9E-68 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 SUPERFAMILY SSF52096 11 180 2.13E-61 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 102 115 - T 20-04-2016 IPR033135 ClpP, histidine active site APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 Pfam PF00574 Clp protease 10 180 7.1E-67 T 20-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APS56_RS12610 eb9bafa93fa2ec8a63e18cf94ca4e7df 180 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 1 180 31.838 T 20-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APS56_RS00980 0cdb40a3dc0d84c46c5c47cc0895d09a 335 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 260 335 7.6E-16 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS00980 0cdb40a3dc0d84c46c5c47cc0895d09a 335 Gene3D G3DSA:2.60.120.200 6 188 4.4E-23 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS00980 0cdb40a3dc0d84c46c5c47cc0895d09a 335 SMART SM00560 42 184 6.4E-4 T 20-04-2016 IPR006558 LamG-like jellyroll fold APS56_RS00980 0cdb40a3dc0d84c46c5c47cc0895d09a 335 SUPERFAMILY SSF49899 11 191 2.22E-22 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS00980 0cdb40a3dc0d84c46c5c47cc0895d09a 335 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 36 182 3.4E-21 T 20-04-2016 APS56_RS08945 ac9b475f8ba09cb1759a8afd01101acb 405 Pfam PF00246 Zinc carboxypeptidase 178 285 2.1E-16 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APS56_RS08945 ac9b475f8ba09cb1759a8afd01101acb 405 PANTHER PTHR12756:SF15 202 282 1.8E-18 T 20-04-2016 APS56_RS08945 ac9b475f8ba09cb1759a8afd01101acb 405 PANTHER PTHR12756 202 282 1.8E-18 T 20-04-2016 APS56_RS08945 ac9b475f8ba09cb1759a8afd01101acb 405 Gene3D G3DSA:3.40.630.10 147 401 1.5E-31 T 20-04-2016 APS56_RS08945 ac9b475f8ba09cb1759a8afd01101acb 405 SUPERFAMILY SSF53187 158 396 2.35E-36 T 20-04-2016 APS56_RS08945 ac9b475f8ba09cb1759a8afd01101acb 405 SMART SM00631 164 405 7.3E-4 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APS56_RS02210 770081e35968d8c07a8e1a8be23f2a40 81 Pfam PF00550 Phosphopantetheine attachment site 9 75 5.5E-6 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APS56_RS02210 770081e35968d8c07a8e1a8be23f2a40 81 SUPERFAMILY SSF47336 1 78 1.7E-11 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APS56_RS02210 770081e35968d8c07a8e1a8be23f2a40 81 Gene3D G3DSA:1.10.1200.10 1 80 4.4E-11 T 20-04-2016 IPR009081 Phosphopantetheine binding ACP domain APS56_RS05060 8a9b65388c7bc04b9ce89f109954b93d 392 Gene3D G3DSA:3.30.1330.10 35 176 8.8E-15 T 20-04-2016 IPR016188 PurM-like, N-terminal domain APS56_RS05060 8a9b65388c7bc04b9ce89f109954b93d 392 PANTHER PTHR10520 37 237 1.4E-45 T 20-04-2016 APS56_RS05060 8a9b65388c7bc04b9ce89f109954b93d 392 PANTHER PTHR10520 253 373 1.4E-45 T 20-04-2016 APS56_RS05060 8a9b65388c7bc04b9ce89f109954b93d 392 Pfam PF02769 AIR synthase related protein, C-terminal domain 182 383 1.9E-7 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS05060 8a9b65388c7bc04b9ce89f109954b93d 392 Gene3D G3DSA:3.90.650.10 177 383 4.4E-43 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS05060 8a9b65388c7bc04b9ce89f109954b93d 392 SUPERFAMILY SSF55326 21 168 1.15E-12 T 20-04-2016 APS56_RS05060 8a9b65388c7bc04b9ce89f109954b93d 392 SUPERFAMILY SSF56042 177 379 3.29E-31 T 20-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APS56_RS15155 4e78360e65c48b7d7bd2427c2e9fd8e1 527 Pfam PF07980 SusD family 367 526 8.1E-33 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS15155 4e78360e65c48b7d7bd2427c2e9fd8e1 527 Gene3D G3DSA:1.25.40.10 220 442 4.8E-35 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15155 4e78360e65c48b7d7bd2427c2e9fd8e1 527 SUPERFAMILY SSF48452 18 526 7.84E-96 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15155 4e78360e65c48b7d7bd2427c2e9fd8e1 527 Pfam PF14322 Starch-binding associating with outer membrane 32 240 2.9E-16 T 20-04-2016 APS56_RS09745 0a657ed2de81170acbd4c4409eb9058f 859 PANTHER PTHR12654 633 795 4.0E-57 T 20-04-2016 APS56_RS09745 0a657ed2de81170acbd4c4409eb9058f 859 PANTHER PTHR12654 42 600 4.0E-57 T 20-04-2016 APS56_RS09745 0a657ed2de81170acbd4c4409eb9058f 859 Pfam PF12215 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 42 365 8.4E-57 T 20-04-2016 IPR024462 Glycosyl-hydrolase family 116, N-terminal KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45 APS56_RS09745 0a657ed2de81170acbd4c4409eb9058f 859 Gene3D G3DSA:1.50.10.10 474 725 9.6E-4 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS09745 0a657ed2de81170acbd4c4409eb9058f 859 Pfam PF04685 Glycosyl-hydrolase family 116, catalytic region 482 776 7.2E-41 T 20-04-2016 IPR006775 Glycosyl-hydrolase family 116, catalytic region GO:0004553 KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45 APS56_RS09745 0a657ed2de81170acbd4c4409eb9058f 859 PANTHER PTHR12654:SF0 633 795 4.0E-57 T 20-04-2016 APS56_RS09745 0a657ed2de81170acbd4c4409eb9058f 859 PANTHER PTHR12654:SF0 42 600 4.0E-57 T 20-04-2016 APS56_RS09745 0a657ed2de81170acbd4c4409eb9058f 859 SUPERFAMILY SSF48208 488 775 1.66E-19 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS13140 298ea6dac4b56fda7faa6d3e9e91904c 294 Gene3D G3DSA:3.40.50.10330 1 152 1.2E-34 T 20-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APS56_RS13140 298ea6dac4b56fda7faa6d3e9e91904c 294 Gene3D G3DSA:2.60.200.30 153 264 1.3E-41 T 20-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APS56_RS13140 298ea6dac4b56fda7faa6d3e9e91904c 294 SUPERFAMILY SSF111331 2 291 8.24E-79 T 20-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APS56_RS13140 298ea6dac4b56fda7faa6d3e9e91904c 294 Pfam PF01513 ATP-NAD kinase 48 272 2.8E-57 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APS56_RS13140 298ea6dac4b56fda7faa6d3e9e91904c 294 PANTHER PTHR20275 1 294 6.0E-84 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APS56_RS13140 298ea6dac4b56fda7faa6d3e9e91904c 294 Hamap MF_00361 NAD kinase [nadK]. 1 288 30.215 T 20-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APS56_RS03430 dc604df402c08992059bc22b0c14f672 386 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 262 282 - T 20-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APS56_RS03430 dc604df402c08992059bc22b0c14f672 386 SUPERFAMILY SSF56796 1 383 7.98E-103 T 20-04-2016 APS56_RS03430 dc604df402c08992059bc22b0c14f672 386 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 358 5.5E-89 T 20-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APS56_RS03430 dc604df402c08992059bc22b0c14f672 386 PANTHER PTHR11496:SF65 1 381 6.7E-172 T 20-04-2016 APS56_RS03430 dc604df402c08992059bc22b0c14f672 386 PANTHER PTHR11496 1 381 6.7E-172 T 20-04-2016 APS56_RS03430 dc604df402c08992059bc22b0c14f672 386 Gene3D G3DSA:1.20.1090.10 183 385 9.8E-49 T 20-04-2016 APS56_RS03430 dc604df402c08992059bc22b0c14f672 386 Gene3D G3DSA:3.40.50.1970 1 182 3.5E-54 T 20-04-2016 APS56_RS03430 dc604df402c08992059bc22b0c14f672 386 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 20-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 Gene3D G3DSA:2.170.130.10 223 338 5.7E-24 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 305 334 3.1E-16 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 133 1123 5.2E-274 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 Gene3D G3DSA:2.60.40.1120 134 222 3.9E-11 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 Gene3D G3DSA:2.40.170.20 423 881 7.4E-22 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 Gene3D G3DSA:2.40.170.20 953 997 7.4E-22 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 Pfam PF13715 CarboxypepD_reg-like domain 134 215 2.7E-15 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 SUPERFAMILY SSF56935 954 998 5.95E-92 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 SUPERFAMILY SSF56935 1042 1123 5.95E-92 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 SUPERFAMILY SSF56935 211 352 5.95E-92 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 SUPERFAMILY SSF56935 417 881 5.95E-92 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 PANTHER PTHR11532 561 640 7.4E-266 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 PANTHER PTHR11532 671 1121 7.4E-266 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 PANTHER PTHR11532 130 471 7.4E-266 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 PANTHER PTHR11532:SF57 561 640 7.4E-266 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 PANTHER PTHR11532:SF57 671 1121 7.4E-266 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 PANTHER PTHR11532:SF57 130 471 7.4E-266 T 20-04-2016 APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 SUPERFAMILY SSF49464 132 213 2.22E-16 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15595 d5762d48960834a8de4002cfc375cd99 1123 Pfam PF07715 TonB-dependent Receptor Plug Domain 223 328 5.5E-23 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS02225 8213e3de29f92f747983ae270752583a 206 PANTHER PTHR30576:SF8 1 189 6.4E-77 T 20-04-2016 APS56_RS02225 8213e3de29f92f747983ae270752583a 206 Pfam PF02397 Bacterial sugar transferase 7 181 4.0E-57 T 20-04-2016 IPR003362 Bacterial sugar transferase APS56_RS02225 8213e3de29f92f747983ae270752583a 206 PANTHER PTHR30576 1 189 6.4E-77 T 20-04-2016 APS56_RS12825 8a0d24bc53a787786a627a67c342e2f7 92 SUPERFAMILY SSF52091 11 77 3.73E-8 T 20-04-2016 IPR002645 STAS domain APS56_RS12825 8a0d24bc53a787786a627a67c342e2f7 92 Gene3D G3DSA:3.30.750.24 12 78 9.6E-7 T 20-04-2016 IPR002645 STAS domain APS56_RS06165 bac61f90ffad1236a1311e23962ae65f 517 SUPERFAMILY SSF82153 126 308 1.02E-13 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06165 bac61f90ffad1236a1311e23962ae65f 517 PANTHER PTHR10900 2 308 1.3E-13 T 20-04-2016 APS56_RS06165 bac61f90ffad1236a1311e23962ae65f 517 Gene3D G3DSA:2.30.180.10 153 307 7.2E-10 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06165 bac61f90ffad1236a1311e23962ae65f 517 Gene3D G3DSA:2.30.180.10 2 147 4.9E-19 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06165 bac61f90ffad1236a1311e23962ae65f 517 SUPERFAMILY SSF82153 2 146 3.79E-18 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06165 bac61f90ffad1236a1311e23962ae65f 517 Pfam PF02469 Fasciclin domain 13 146 5.0E-11 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06165 bac61f90ffad1236a1311e23962ae65f 517 Pfam PF02469 Fasciclin domain 160 307 2.8E-8 T 20-04-2016 IPR000782 FAS1 domain APS56_RS00525 a41dc11030ce727ad4ec1b55a60d0d18 222 Gene3D G3DSA:3.20.20.70 3 221 9.1E-62 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS00525 a41dc11030ce727ad4ec1b55a60d0d18 222 PANTHER PTHR30246 1 222 2.8E-72 T 20-04-2016 APS56_RS00525 a41dc11030ce727ad4ec1b55a60d0d18 222 Pfam PF01081 KDPG and KHG aldolase 10 208 1.8E-32 T 20-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APS56_RS00525 a41dc11030ce727ad4ec1b55a60d0d18 222 SUPERFAMILY SSF51569 5 218 1.19E-54 T 20-04-2016 APS56_RS00525 a41dc11030ce727ad4ec1b55a60d0d18 222 PANTHER PTHR30246:SF4 1 222 2.8E-72 T 20-04-2016 APS56_RS01310 aa81668e10a034a582277b0cdccdadd3 450 Pfam PF14092 Domain of unknown function (DUF4270) 61 393 4.5E-28 T 20-04-2016 IPR025366 Protein of unknown function DUF4270 APS56_RS08210 666d7fad3894fd04cd45dce337827554 273 PANTHER PTHR34138 1 260 5.6E-28 T 20-04-2016 APS56_RS08210 666d7fad3894fd04cd45dce337827554 273 PANTHER PTHR34138:SF1 1 260 5.6E-28 T 20-04-2016 APS56_RS08210 666d7fad3894fd04cd45dce337827554 273 Pfam PF04085 rod shape-determining protein MreC 109 256 2.0E-33 T 20-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APS56_RS07230 6aa2bafa16747f65e5c3dc49bab6c258 117 PANTHER PTHR34182 4 112 7.7E-15 T 20-04-2016 APS56_RS07230 6aa2bafa16747f65e5c3dc49bab6c258 117 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 5 73 5.4E-20 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APS56_RS07230 6aa2bafa16747f65e5c3dc49bab6c258 117 PRINTS PR01651 Protein-export SecG membrane protein signature 56 78 4.1E-9 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APS56_RS07230 6aa2bafa16747f65e5c3dc49bab6c258 117 PRINTS PR01651 Protein-export SecG membrane protein signature 5 25 4.1E-9 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APS56_RS07230 6aa2bafa16747f65e5c3dc49bab6c258 117 PRINTS PR01651 Protein-export SecG membrane protein signature 25 39 4.1E-9 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APS56_RS07230 6aa2bafa16747f65e5c3dc49bab6c258 117 PRINTS PR01651 Protein-export SecG membrane protein signature 40 56 4.1E-9 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APS56_RS07230 6aa2bafa16747f65e5c3dc49bab6c258 117 Pfam PF03840 Preprotein translocase SecG subunit 6 73 3.7E-18 T 20-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 SUPERFAMILY SSF52540 235 384 1.47E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 SUPERFAMILY SSF52540 81 207 1.47E-82 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 SUPERFAMILY SSF50615 4 79 9.42E-22 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 PANTHER PTHR15184 5 206 8.0E-304 T 20-04-2016 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 PANTHER PTHR15184 228 502 8.0E-304 T 20-04-2016 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 PANTHER PTHR15184:SF8 5 206 8.0E-304 T 20-04-2016 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 PANTHER PTHR15184:SF8 228 502 8.0E-304 T 20-04-2016 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 77 3.2E-20 T 20-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 SUPERFAMILY SSF47917 384 497 1.1E-47 T 20-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 Hamap MF_01347 ATP synthase subunit beta [atpB]. 3 498 56.031 T 20-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 Gene3D G3DSA:1.10.1140.10 384 501 3.0E-49 T 20-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 SMART SM00382 148 365 5.0E-6 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 Gene3D G3DSA:3.40.50.300 81 382 1.0E-103 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 136 380 4.2E-60 T 20-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 Gene3D G3DSA:2.40.10.170 3 79 2.1E-29 T 20-04-2016 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 371 380 - T 20-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS12025 a64a3e6f595ed2ab715e5bf6f12d1225 502 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 5 498 3.4E-233 T 20-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APS56_RS06035 caa30d2ea409ca3a4c7e27f1b1d02af8 307 PANTHER PTHR23024 48 307 1.1E-20 T 20-04-2016 APS56_RS06035 caa30d2ea409ca3a4c7e27f1b1d02af8 307 Pfam PF07859 alpha/beta hydrolase fold 67 283 5.4E-13 T 20-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APS56_RS06035 caa30d2ea409ca3a4c7e27f1b1d02af8 307 SUPERFAMILY SSF53474 33 303 5.7E-37 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06035 caa30d2ea409ca3a4c7e27f1b1d02af8 307 Gene3D G3DSA:3.40.50.1820 34 301 8.0E-44 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06035 caa30d2ea409ca3a4c7e27f1b1d02af8 307 PANTHER PTHR23024:SF202 48 307 1.1E-20 T 20-04-2016 APS56_RS07125 18697a34a5850c036b3f6718042ca409 420 Pfam PF07805 HipA-like N-terminal domain 185 256 8.2E-12 T 20-04-2016 IPR012894 HipA, N-terminal subdomain 2 APS56_RS07125 18697a34a5850c036b3f6718042ca409 420 PANTHER PTHR37419 183 414 1.9E-19 T 20-04-2016 APS56_RS07125 18697a34a5850c036b3f6718042ca409 420 Pfam PF07804 HipA-like C-terminal domain 262 396 5.2E-33 T 20-04-2016 IPR012893 HipA-like, C-terminal APS56_RS07125 18697a34a5850c036b3f6718042ca409 420 PANTHER PTHR37419:SF2 183 414 1.9E-19 T 20-04-2016 APS56_RS09160 e350fb4d0cd4c8c68fc40e6651fa7028 650 Gene3D G3DSA:2.130.10.10 85 522 1.2E-115 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS09160 e350fb4d0cd4c8c68fc40e6651fa7028 650 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 579 628 - T 20-04-2016 IPR001505 Copper centre Cu(A) GO:0005507 APS56_RS09160 e350fb4d0cd4c8c68fc40e6651fa7028 650 TIGRFAM TIGR04246 nitrous_NosZ_Gp: nitrous-oxide reductase, Sec-dependent 35 636 1.2E-282 T 20-04-2016 IPR026468 Nitrous-oxide reductase, Sec-dependent APS56_RS09160 e350fb4d0cd4c8c68fc40e6651fa7028 650 Gene3D G3DSA:2.60.40.420 524 634 8.2E-30 T 20-04-2016 IPR008972 Cupredoxin APS56_RS09160 e350fb4d0cd4c8c68fc40e6651fa7028 650 SUPERFAMILY SSF49503 531 636 2.89E-20 T 20-04-2016 IPR008972 Cupredoxin APS56_RS09160 e350fb4d0cd4c8c68fc40e6651fa7028 650 SUPERFAMILY SSF50974 38 509 8.76E-78 T 20-04-2016 IPR011045 Nitrous oxide reductase, N-terminal APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 Gene3D G3DSA:2.170.130.10 126 218 1.3E-12 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 Gene3D G3DSA:2.60.40.1120 22 107 3.1E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 SUPERFAMILY SSF49464 21 98 2.51E-12 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 SUPERFAMILY SSF56935 126 776 4.58E-59 T 20-04-2016 APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 Gene3D G3DSA:2.40.170.20 797 818 2.1E-32 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 Gene3D G3DSA:2.40.170.20 219 756 2.1E-32 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 Pfam PF14905 Outer membrane protein beta-barrel family 391 814 6.3E-75 T 20-04-2016 APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 Pfam PF07715 TonB-dependent Receptor Plug Domain 129 217 1.2E-9 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09335 4a8e6cdbc9e786c0d0abee2ce82753f6 835 Pfam PF13620 Carboxypeptidase regulatory-like domain 21 96 1.1E-12 T 20-04-2016 APS56_RS15045 8c8faf8a2e06f4f2e9fabf12ac5e7420 479 Gene3D G3DSA:3.40.309.10 262 441 7.5E-64 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APS56_RS15045 8c8faf8a2e06f4f2e9fabf12ac5e7420 479 SUPERFAMILY SSF53720 3 478 1.15E-152 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APS56_RS15045 8c8faf8a2e06f4f2e9fabf12ac5e7420 479 Gene3D G3DSA:3.40.605.10 3 261 1.2E-84 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APS56_RS15045 8c8faf8a2e06f4f2e9fabf12ac5e7420 479 Pfam PF00171 Aldehyde dehydrogenase family 13 474 1.4E-156 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APS56_RS15045 8c8faf8a2e06f4f2e9fabf12ac5e7420 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APS56_RS15045 8c8faf8a2e06f4f2e9fabf12ac5e7420 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 20-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APS56_RS15045 8c8faf8a2e06f4f2e9fabf12ac5e7420 479 PANTHER PTHR11699 7 478 4.4E-191 T 20-04-2016 APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 Gene3D G3DSA:3.40.50.720 4 255 8.7E-87 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.4E-12 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.4E-12 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.4E-12 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PANTHER PTHR24321 6 256 2.9E-68 T 20-04-2016 APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PANTHER PTHR24321:SF6 6 256 2.9E-68 T 20-04-2016 APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 SUPERFAMILY SSF51735 7 255 5.41E-82 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 6.9E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.9E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 6.9E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.9E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.9E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.9E-42 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS05900 7a66df4124608596ffb4b7a33b7cbb39 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 254 1.6E-60 T 20-04-2016 APS56_RS14150 034a3c203f40205596b87c8de5455ce9 254 Gene3D G3DSA:2.120.10.30 71 248 1.0E-8 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS14150 034a3c203f40205596b87c8de5455ce9 254 SUPERFAMILY SSF63825 58 251 1.83E-11 T 20-04-2016 APS56_RS05850 0ba5ebb640caa6e3570c18ff0a4339d3 169 Pfam PF13202 EF hand 73 93 0.015 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS05850 0ba5ebb640caa6e3570c18ff0a4339d3 169 Pfam PF13202 EF hand 47 61 0.078 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS05850 0ba5ebb640caa6e3570c18ff0a4339d3 169 Gene3D G3DSA:1.10.238.10 38 125 9.8E-11 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS05850 0ba5ebb640caa6e3570c18ff0a4339d3 169 ProSitePatterns PS00018 EF-hand calcium-binding domain. 78 90 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS05850 0ba5ebb640caa6e3570c18ff0a4339d3 169 SMART SM00054 131 159 2.7 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS05850 0ba5ebb640caa6e3570c18ff0a4339d3 169 SMART SM00054 69 97 2.1 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS05850 0ba5ebb640caa6e3570c18ff0a4339d3 169 SUPERFAMILY SSF47473 45 158 5.86E-11 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS05850 0ba5ebb640caa6e3570c18ff0a4339d3 169 Gene3D G3DSA:1.10.238.10 126 167 2.1E-4 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS15225 2a8f120a5fc0457ce92453d7b093e042 305 Gene3D G3DSA:2.120.10.30 98 300 2.7E-11 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS15225 2a8f120a5fc0457ce92453d7b093e042 305 SUPERFAMILY SSF82171 37 300 8.63E-15 T 20-04-2016 APS56_RS15225 2a8f120a5fc0457ce92453d7b093e042 305 Pfam PF07676 WD40-like Beta Propeller Repeat 98 112 0.12 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS15225 2a8f120a5fc0457ce92453d7b093e042 305 Pfam PF07676 WD40-like Beta Propeller Repeat 163 181 0.0015 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS15225 2a8f120a5fc0457ce92453d7b093e042 305 Pfam PF07676 WD40-like Beta Propeller Repeat 211 246 0.0024 T 20-04-2016 IPR011659 WD40-like Beta Propeller APS56_RS03750 116e0f4fe2785917491e447ed42a412a 418 Pfam PF13372 Alginate export 24 338 1.8E-9 T 20-04-2016 IPR025388 Alginate export domain UniPathway: UPA00286 APS56_RS03385 9fe39e57188b6a4dbacb47e7a2c48173 565 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 557 3.1E-259 T 20-04-2016 IPR019899 Sodium/solute symporter, VC2705 subfamily APS56_RS03385 9fe39e57188b6a4dbacb47e7a2c48173 565 Pfam PF00474 Sodium:solute symporter family 33 304 1.4E-35 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS03385 9fe39e57188b6a4dbacb47e7a2c48173 565 Pfam PF00474 Sodium:solute symporter family 371 486 2.5E-18 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS03385 9fe39e57188b6a4dbacb47e7a2c48173 565 PANTHER PTHR11819 4 309 4.1E-217 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS03385 9fe39e57188b6a4dbacb47e7a2c48173 565 PANTHER PTHR11819 336 563 4.1E-217 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS03385 9fe39e57188b6a4dbacb47e7a2c48173 565 PANTHER PTHR11819:SF159 4 309 4.1E-217 T 20-04-2016 APS56_RS03385 9fe39e57188b6a4dbacb47e7a2c48173 565 PANTHER PTHR11819:SF159 336 563 4.1E-217 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 198 228 6.8E-18 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 Gene3D G3DSA:2.170.130.10 115 226 1.8E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 PANTHER PTHR11532 793 1015 3.8E-251 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 PANTHER PTHR11532 1 368 3.8E-251 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 PANTHER PTHR11532 558 776 3.8E-251 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 PANTHER PTHR11532 439 527 3.8E-251 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 SUPERFAMILY SSF56935 845 889 9.52E-85 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 SUPERFAMILY SSF56935 426 766 9.52E-85 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 SUPERFAMILY SSF56935 920 990 9.52E-85 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 SUPERFAMILY SSF56935 298 387 9.52E-85 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 SUPERFAMILY SSF56935 101 246 9.52E-85 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 222 3.7E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 SUPERFAMILY SSF49464 26 104 4.84E-17 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 26 1015 1.4E-263 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 Pfam PF13715 CarboxypepD_reg-like domain 27 106 2.0E-17 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 Gene3D G3DSA:2.40.170.20 854 1015 3.2E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 Gene3D G3DSA:2.40.170.20 227 246 3.2E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 Gene3D G3DSA:2.40.170.20 307 791 3.2E-53 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 PANTHER PTHR11532:SF57 793 1015 3.8E-251 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 PANTHER PTHR11532:SF57 1 368 3.8E-251 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 PANTHER PTHR11532:SF57 558 776 3.8E-251 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 PANTHER PTHR11532:SF57 439 527 3.8E-251 T 20-04-2016 APS56_RS06340 cb6b6a5613ed2f6a98b0bf37cad0068b 1017 Gene3D G3DSA:2.60.40.1120 27 110 1.6E-11 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS06975 939afffc47e7316f87ead33ef84ae100 220 Gene3D G3DSA:3.40.50.300 87 142 2.5E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06975 939afffc47e7316f87ead33ef84ae100 220 Gene3D G3DSA:3.40.50.300 51 86 4.7E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06975 939afffc47e7316f87ead33ef84ae100 220 SUPERFAMILY SSF52540 48 189 3.4E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06975 939afffc47e7316f87ead33ef84ae100 220 Gene3D G3DSA:3.40.50.300 148 197 1.0E-5 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15870 f13870618c7a91859804354660c131e0 153 PIRSF PIRSF005859 2 153 3.9E-28 T 20-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 APS56_RS15870 f13870618c7a91859804354660c131e0 153 Pfam PF03073 TspO/MBR family 10 150 1.4E-29 T 20-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 APS56_RS15870 f13870618c7a91859804354660c131e0 153 PANTHER PTHR10057 1 153 7.2E-16 T 20-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 PANTHER PTHR10851:SF0 1 215 4.7E-101 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 11 215 35.425 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 174 215 1.3E-19 T 20-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 45 119 4.9E-18 T 20-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 4 215 3.3E-80 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 Gene3D G3DSA:2.30.110.10 20 215 5.0E-74 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 184 197 - T 20-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 PANTHER PTHR10851 1 215 4.7E-101 T 20-04-2016 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 PIRSF PIRSF000190 1 215 2.4E-72 T 20-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APS56_RS01675 003fd30fff2f18ff20418cbb524438be 215 SUPERFAMILY SSF50475 20 215 2.06E-59 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 Gene3D G3DSA:1.10.287.70 19 227 1.7E-54 T 20-04-2016 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 PRINTS PR00169 Potassium channel signature 53 76 4.5E-34 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 PRINTS PR00169 Potassium channel signature 171 193 4.5E-34 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 PRINTS PR00169 Potassium channel signature 11 39 4.5E-34 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 PRINTS PR00169 Potassium channel signature 200 226 4.5E-34 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 PRINTS PR00169 Potassium channel signature 140 163 4.5E-34 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 PRINTS PR00169 Potassium channel signature 79 99 4.5E-34 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 PANTHER PTHR11537:SF14 15 224 1.0E-64 T 20-04-2016 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 SUPERFAMILY SSF81324 14 227 2.14E-54 T 20-04-2016 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 PANTHER PTHR11537 15 224 1.0E-64 T 20-04-2016 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 APS56_RS06545 e31613b7a0dfb1fc240d0e4cd813302d 236 Pfam PF00520 Ion transport protein 18 227 8.7E-38 T 20-04-2016 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 APS56_RS12425 2db57e9fc9dbaed42ae05bcc83d3b87b 209 Pfam PF01810 LysE type translocator 16 197 3.4E-8 T 20-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APS56_RS04710 96962ff569dbce7feab24f8b822e2ecb 135 SUPERFAMILY SSF47413 6 75 1.46E-13 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS04710 96962ff569dbce7feab24f8b822e2ecb 135 SMART SM00530 13 67 2.5E-11 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS04710 96962ff569dbce7feab24f8b822e2ecb 135 PANTHER PTHR10245 9 73 3.9E-22 T 20-04-2016 APS56_RS04710 96962ff569dbce7feab24f8b822e2ecb 135 Gene3D G3DSA:1.10.260.40 10 73 2.9E-16 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS04710 96962ff569dbce7feab24f8b822e2ecb 135 Pfam PF01381 Helix-turn-helix 15 64 9.5E-13 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS04710 96962ff569dbce7feab24f8b822e2ecb 135 PANTHER PTHR10245:SF58 9 73 3.9E-22 T 20-04-2016 APS56_RS04920 42f54cf30c72a36535088f984bc91bda 263 PANTHER PTHR30269 1 95 2.4E-37 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APS56_RS04920 42f54cf30c72a36535088f984bc91bda 263 PANTHER PTHR30269 112 262 2.4E-37 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APS56_RS04920 42f54cf30c72a36535088f984bc91bda 263 PANTHER PTHR30269:SF14 1 95 2.4E-37 T 20-04-2016 APS56_RS04920 42f54cf30c72a36535088f984bc91bda 263 PANTHER PTHR30269:SF14 112 262 2.4E-37 T 20-04-2016 APS56_RS04920 42f54cf30c72a36535088f984bc91bda 263 Pfam PF01925 Sulfite exporter TauE/SafE 9 257 3.3E-46 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APS56_RS15780 1e59b00dba4491093bf40ffa13df5665 509 Gene3D G3DSA:1.25.40.10 362 447 4.1E-33 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15780 1e59b00dba4491093bf40ffa13df5665 509 Gene3D G3DSA:1.25.40.10 198 306 4.1E-33 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15780 1e59b00dba4491093bf40ffa13df5665 509 Pfam PF07980 SusD family 276 507 2.6E-44 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS15780 1e59b00dba4491093bf40ffa13df5665 509 Pfam PF14322 Starch-binding associating with outer membrane 22 215 5.6E-15 T 20-04-2016 APS56_RS15780 1e59b00dba4491093bf40ffa13df5665 509 SUPERFAMILY SSF48452 17 507 1.26E-106 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS00345 cf4ca312c7fb887e56d549cb22576e3c 339 Pfam PF01594 Domain of unknown function DUF20 13 326 1.2E-44 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APS56_RS00345 cf4ca312c7fb887e56d549cb22576e3c 339 PANTHER PTHR21716 2 329 2.1E-48 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APS56_RS13200 a0fdea0a54a89e092fda86b2f29a67a6 344 Gene3D G3DSA:2.60.40.1120 32 90 5.0E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS13200 a0fdea0a54a89e092fda86b2f29a67a6 344 SUPERFAMILY SSF49464 32 116 7.98E-13 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS13200 a0fdea0a54a89e092fda86b2f29a67a6 344 Pfam PF13715 CarboxypepD_reg-like domain 33 118 1.2E-12 T 20-04-2016 APS56_RS12500 6fd4724be1196cd0e2f6234849a9307f 109 PANTHER PTHR23426 4 105 6.2E-19 T 20-04-2016 APS56_RS12500 6fd4724be1196cd0e2f6234849a9307f 109 SUPERFAMILY SSF54292 5 105 4.33E-20 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS12500 6fd4724be1196cd0e2f6234849a9307f 109 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 28 95 6.9E-6 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS12500 6fd4724be1196cd0e2f6234849a9307f 109 Gene3D G3DSA:3.10.20.30 4 105 3.5E-27 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS06570 cdd81e57bd408988834a0b137a5dfc51 680 PANTHER PTHR11804:SF8 1 679 7.7E-261 T 20-04-2016 APS56_RS06570 cdd81e57bd408988834a0b137a5dfc51 680 Pfam PF01432 Peptidase family M3 228 676 1.1E-141 T 20-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APS56_RS06570 cdd81e57bd408988834a0b137a5dfc51 680 PANTHER PTHR11804 1 679 7.7E-261 T 20-04-2016 APS56_RS06570 cdd81e57bd408988834a0b137a5dfc51 680 SUPERFAMILY SSF55486 7 676 7.99E-196 T 20-04-2016 APS56_RS06570 cdd81e57bd408988834a0b137a5dfc51 680 Gene3D G3DSA:1.10.1370.10 504 677 9.3E-129 T 20-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APS56_RS06570 cdd81e57bd408988834a0b137a5dfc51 680 Gene3D G3DSA:1.10.1370.10 145 350 9.3E-129 T 20-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APS56_RS06570 cdd81e57bd408988834a0b137a5dfc51 680 Gene3D G3DSA:3.40.390.10 360 503 9.9E-56 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS06570 cdd81e57bd408988834a0b137a5dfc51 680 Gene3D G3DSA:1.20.1050.40 13 144 6.5E-31 T 20-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APS56_RS16545 8309e6802d723f634832b8e00e9d23d5 113 Gene3D G3DSA:1.20.120.160 3 75 1.1E-12 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APS56_RS16545 8309e6802d723f634832b8e00e9d23d5 113 SUPERFAMILY SSF47226 10 68 2.88E-11 T 20-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APS56_RS04525 9b07428b96741c3bc4f8d0115f627827 921 SUPERFAMILY SSF56935 404 784 9.61E-17 T 20-04-2016 APS56_RS04525 9b07428b96741c3bc4f8d0115f627827 921 SUPERFAMILY SSF56935 814 890 9.61E-17 T 20-04-2016 APS56_RS04525 9b07428b96741c3bc4f8d0115f627827 921 SUPERFAMILY SSF56935 132 342 9.61E-17 T 20-04-2016 APS56_RS04525 9b07428b96741c3bc4f8d0115f627827 921 Pfam PF13715 CarboxypepD_reg-like domain 24 115 2.5E-9 T 20-04-2016 APS56_RS04525 9b07428b96741c3bc4f8d0115f627827 921 Gene3D G3DSA:2.60.40.1120 23 115 9.3E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS04525 9b07428b96741c3bc4f8d0115f627827 921 SUPERFAMILY SSF49464 22 116 2.55E-9 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS04525 9b07428b96741c3bc4f8d0115f627827 921 Pfam PF14905 Outer membrane protein beta-barrel family 443 888 5.6E-20 T 20-04-2016 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 20-04-2016 IPR031157 Tr-type G domain, conserved site APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 PRINTS PR00315 GTP-binding elongation factor signature 5 18 2.0E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 PRINTS PR00315 GTP-binding elongation factor signature 137 146 2.0E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 PRINTS PR00315 GTP-binding elongation factor signature 100 111 2.0E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 PRINTS PR00315 GTP-binding elongation factor signature 64 72 2.0E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 PRINTS PR00315 GTP-binding elongation factor signature 84 94 2.0E-13 T 20-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 SUPERFAMILY SSF50447 220 309 7.29E-18 T 20-04-2016 IPR009000 Translation protein, beta-barrel domain APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 SUPERFAMILY SSF50465 313 414 8.15E-28 T 20-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 SUPERFAMILY SSF52540 4 212 1.03E-53 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 Gene3D G3DSA:2.40.30.10 314 414 2.2E-11 T 20-04-2016 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 PANTHER PTHR23115 6 304 4.5E-52 T 20-04-2016 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 Pfam PF00009 Elongation factor Tu GTP binding domain 3 202 6.2E-43 T 20-04-2016 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 4 414 2.0E-149 T 20-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 Gene3D G3DSA:3.40.50.300 3 210 8.7E-62 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07400 6c1d90c555b20d80a15aee4457ec4102 415 Gene3D G3DSA:2.40.30.10 222 307 9.7E-13 T 20-04-2016 APS56_RS15610 e0e7013ea30616685d82f47f672ae4f7 137 SUPERFAMILY SSF52172 5 130 5.83E-29 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS15610 e0e7013ea30616685d82f47f672ae4f7 137 SMART SM00448 5 122 1.6E-24 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15610 e0e7013ea30616685d82f47f672ae4f7 137 Pfam PF00072 Response regulator receiver domain 7 122 1.2E-21 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15610 e0e7013ea30616685d82f47f672ae4f7 137 Gene3D G3DSA:3.40.50.2300 5 130 9.3E-32 T 20-04-2016 APS56_RS15610 e0e7013ea30616685d82f47f672ae4f7 137 PANTHER PTHR26402 5 126 9.5E-29 T 20-04-2016 APS56_RS01485 67ad20b4b9d9a5f405a5535eb0960b79 243 SUPERFAMILY SSF55008 1 58 5.89E-14 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS01485 67ad20b4b9d9a5f405a5535eb0960b79 243 Pfam PF00403 Heavy-metal-associated domain 6 58 1.0E-11 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS01485 67ad20b4b9d9a5f405a5535eb0960b79 243 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 20-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APS56_RS01485 67ad20b4b9d9a5f405a5535eb0960b79 243 Gene3D G3DSA:3.30.70.100 1 58 9.7E-17 T 20-04-2016 APS56_RS11080 27537ef392508da8ac126bfb6920d805 177 PANTHER PTHR38030:SF2 1 173 1.2E-61 T 20-04-2016 APS56_RS11080 27537ef392508da8ac126bfb6920d805 177 Pfam PF12724 Flavodoxin domain 7 153 1.2E-42 T 20-04-2016 IPR026816 Flavodoxin domain APS56_RS11080 27537ef392508da8ac126bfb6920d805 177 PANTHER PTHR38030 1 173 1.2E-61 T 20-04-2016 APS56_RS11080 27537ef392508da8ac126bfb6920d805 177 SUPERFAMILY SSF52218 4 168 5.33E-26 T 20-04-2016 IPR029039 Flavoprotein-like domain APS56_RS11080 27537ef392508da8ac126bfb6920d805 177 Gene3D G3DSA:3.40.50.360 3 176 6.9E-16 T 20-04-2016 IPR029039 Flavoprotein-like domain APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.1 T 20-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 3.5E-83 T 20-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 SMART SM01240 7 344 2.7E-138 T 20-04-2016 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 PIRSF PIRSF000235 1 346 4.7E-190 T 20-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 20-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 PANTHER PTHR11911:SF66 1 163 1.3E-211 T 20-04-2016 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 PANTHER PTHR11911:SF66 181 345 1.3E-211 T 20-04-2016 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 Gene3D G3DSA:3.20.20.70 3 343 1.2E-112 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 SUPERFAMILY SSF51412 5 335 5.63E-104 T 20-04-2016 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 2.8E-187 T 20-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 PANTHER PTHR11911 1 163 1.3E-211 T 20-04-2016 APS56_RS03675 137b776fea073bc39dbd6fb4f45a80dd 346 PANTHER PTHR11911 181 345 1.3E-211 T 20-04-2016 APS56_RS00475 7d08c0bf6591acb6e2ab7652d77a1650 239 PANTHER PTHR30294:SF5 1 230 2.2E-45 T 20-04-2016 APS56_RS00475 7d08c0bf6591acb6e2ab7652d77a1650 239 TIGRFAM TIGR03518 ABC_perm_GldF: gliding motility-associated ABC transporter permease protein GldF 1 236 1.1E-110 T 20-04-2016 IPR019860 Gliding motility-associated ABC transporter permease protein GldF APS56_RS00475 7d08c0bf6591acb6e2ab7652d77a1650 239 Pfam PF12679 ABC-2 family transporter protein 63 223 6.5E-14 T 20-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 APS56_RS00475 7d08c0bf6591acb6e2ab7652d77a1650 239 PANTHER PTHR30294 1 230 2.2E-45 T 20-04-2016 APS56_RS02840 72831a38d7f5b6aef443c4c75d6acfb9 290 PIRSF PIRSF006232 2 290 6.1E-83 T 20-04-2016 IPR012093 Pirin APS56_RS02840 72831a38d7f5b6aef443c4c75d6acfb9 290 Pfam PF02678 Pirin 22 129 1.7E-29 T 20-04-2016 IPR003829 Pirin, N-terminal domain APS56_RS02840 72831a38d7f5b6aef443c4c75d6acfb9 290 PANTHER PTHR13903 1 286 4.5E-123 T 20-04-2016 IPR012093 Pirin APS56_RS02840 72831a38d7f5b6aef443c4c75d6acfb9 290 Pfam PF05726 Pirin C-terminal cupin domain 185 286 6.7E-30 T 20-04-2016 IPR008778 Pirin, C-terminal domain APS56_RS02840 72831a38d7f5b6aef443c4c75d6acfb9 290 Gene3D G3DSA:2.60.120.10 11 259 6.2E-72 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS02840 72831a38d7f5b6aef443c4c75d6acfb9 290 PANTHER PTHR13903:SF12 1 286 4.5E-123 T 20-04-2016 APS56_RS02840 72831a38d7f5b6aef443c4c75d6acfb9 290 SUPERFAMILY SSF51182 8 288 6.23E-74 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS00785 b61b00118840dbbefa1b5ce85bddb74f 223 Gene3D G3DSA:3.20.20.10 1 222 3.4E-74 T 20-04-2016 IPR029066 PLP-binding barrel APS56_RS00785 b61b00118840dbbefa1b5ce85bddb74f 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 219 3.2E-60 T 20-04-2016 IPR011078 Uncharacterised protein family UPF0001 APS56_RS00785 b61b00118840dbbefa1b5ce85bddb74f 223 SUPERFAMILY SSF51419 1 217 3.66E-70 T 20-04-2016 IPR029066 PLP-binding barrel APS56_RS00785 b61b00118840dbbefa1b5ce85bddb74f 223 PANTHER PTHR10146 15 222 1.0E-80 T 20-04-2016 IPR011078 Uncharacterised protein family UPF0001 APS56_RS00785 b61b00118840dbbefa1b5ce85bddb74f 223 Pfam PF01168 Alanine racemase, N-terminal domain 2 219 8.6E-24 T 20-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APS56_RS00785 b61b00118840dbbefa1b5ce85bddb74f 223 PIRSF PIRSF004848 1 223 7.5E-73 T 20-04-2016 IPR011078 Uncharacterised protein family UPF0001 APS56_RS07590 43078281f76d67db8fd67005519aefed 190 SUPERFAMILY SSF51206 15 118 2.75E-15 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS07590 43078281f76d67db8fd67005519aefed 190 PANTHER PTHR24567:SF33 13 190 5.5E-29 T 20-04-2016 APS56_RS07590 43078281f76d67db8fd67005519aefed 190 PANTHER PTHR24567 13 190 5.5E-29 T 20-04-2016 APS56_RS07590 43078281f76d67db8fd67005519aefed 190 Pfam PF00027 Cyclic nucleotide-binding domain 29 117 3.4E-9 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS07590 43078281f76d67db8fd67005519aefed 190 Gene3D G3DSA:2.60.120.10 2 155 2.5E-31 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS04905 6219ac8e33140fffdba91378f9c13e04 209 SUPERFAMILY SSF51206 9 146 6.81E-25 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS04905 6219ac8e33140fffdba91378f9c13e04 209 Pfam PF00027 Cyclic nucleotide-binding domain 29 116 3.5E-7 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS04905 6219ac8e33140fffdba91378f9c13e04 209 Gene3D G3DSA:2.60.120.10 8 145 1.4E-20 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS04905 6219ac8e33140fffdba91378f9c13e04 209 PANTHER PTHR24567 1 209 1.7E-27 T 20-04-2016 APS56_RS04905 6219ac8e33140fffdba91378f9c13e04 209 SMART SM00419 162 209 1.5E-4 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS04905 6219ac8e33140fffdba91378f9c13e04 209 Gene3D G3DSA:1.10.10.10 149 208 3.8E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS04905 6219ac8e33140fffdba91378f9c13e04 209 SUPERFAMILY SSF46785 144 208 1.08E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS04905 6219ac8e33140fffdba91378f9c13e04 209 Pfam PF13545 Crp-like helix-turn-helix domain 165 208 3.4E-8 T 20-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APS56_RS07195 90cc44974aa5f7d711b94ae96e985ee7 388 PANTHER PTHR11358 45 299 3.6E-13 T 20-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APS56_RS07195 90cc44974aa5f7d711b94ae96e985ee7 388 Pfam PF00491 Arginase family 81 297 9.1E-15 T 20-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APS56_RS07195 90cc44974aa5f7d711b94ae96e985ee7 388 SUPERFAMILY SSF52768 30 303 5.94E-56 T 20-04-2016 APS56_RS07195 90cc44974aa5f7d711b94ae96e985ee7 388 PANTHER PTHR11358:SF26 45 299 3.6E-13 T 20-04-2016 APS56_RS07195 90cc44974aa5f7d711b94ae96e985ee7 388 Gene3D G3DSA:3.40.800.10 40 302 2.5E-32 T 20-04-2016 IPR023696 Ureohydrolase domain APS56_RS13550 f75780fe0265d64d327403f06c00a465 451 Pfam PF14135 Domain of unknown function (DUF4302) 13 258 4.2E-39 T 20-04-2016 IPR025396 Protein of unknown function DUF4302 APS56_RS11255 a521ceea4ab455967fc32c1a5399a389 215 Pfam PF00265 Thymidine kinase 14 185 4.5E-49 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APS56_RS11255 a521ceea4ab455967fc32c1a5399a389 215 SUPERFAMILY SSF52540 13 146 2.34E-44 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11255 a521ceea4ab455967fc32c1a5399a389 215 Gene3D G3DSA:3.30.60.20 147 189 3.1E-9 T 20-04-2016 APS56_RS11255 a521ceea4ab455967fc32c1a5399a389 215 PANTHER PTHR11441 11 198 7.3E-81 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APS56_RS11255 a521ceea4ab455967fc32c1a5399a389 215 Hamap MF_00124 Thymidine kinase [tdk]. 13 189 30.196 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APS56_RS11255 a521ceea4ab455967fc32c1a5399a389 215 PIRSF PIRSF035805 11 200 4.3E-56 T 20-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APS56_RS11255 a521ceea4ab455967fc32c1a5399a389 215 SUPERFAMILY SSF57716 147 192 4.28E-8 T 20-04-2016 APS56_RS08730 7413aca2b6b8dcf9bf7821a38356a84f 209 Gene3D G3DSA:2.40.128.110 38 168 4.0E-5 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS08730 7413aca2b6b8dcf9bf7821a38356a84f 209 Pfam PF04264 YceI-like domain 40 204 7.7E-12 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS08730 7413aca2b6b8dcf9bf7821a38356a84f 209 SUPERFAMILY SSF101874 37 167 6.54E-5 T 20-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APS56_RS14195 44954bbacb463574320e1fa2c2d41b6b 510 PANTHER PTHR30121:SF3 28 465 3.8E-148 T 20-04-2016 APS56_RS14195 44954bbacb463574320e1fa2c2d41b6b 510 Gene3D G3DSA:3.40.50.300 228 399 7.9E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14195 44954bbacb463574320e1fa2c2d41b6b 510 Gene3D G3DSA:3.40.50.300 29 111 7.9E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14195 44954bbacb463574320e1fa2c2d41b6b 510 SUPERFAMILY SSF52540 30 407 3.1E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14195 44954bbacb463574320e1fa2c2d41b6b 510 Pfam PF05872 Bacterial protein of unknown function (DUF853) 36 478 2.1E-175 T 20-04-2016 IPR033186 Helicase HerA-like C-terminal APS56_RS14195 44954bbacb463574320e1fa2c2d41b6b 510 PANTHER PTHR30121 28 465 3.8E-148 T 20-04-2016 APS56_RS01415 6fde69d1a64eafcfd7f9a76a2d231bf5 102 SUPERFAMILY SSF47413 1 64 2.17E-11 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS01415 6fde69d1a64eafcfd7f9a76a2d231bf5 102 Gene3D G3DSA:1.10.260.40 1 62 9.2E-12 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS01415 6fde69d1a64eafcfd7f9a76a2d231bf5 102 SMART SM00530 6 61 7.9E-8 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS01415 6fde69d1a64eafcfd7f9a76a2d231bf5 102 Pfam PF13560 Helix-turn-helix domain 2 61 7.9E-11 T 20-04-2016 APS56_RS13020 7acf9bd0793f4c155117c642b6619228 193 PANTHER PTHR11403 19 193 7.1E-23 T 20-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 APS56_RS13020 7acf9bd0793f4c155117c642b6619228 193 Pfam PF00510 Cytochrome c oxidase subunit III 31 191 8.1E-16 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APS56_RS13020 7acf9bd0793f4c155117c642b6619228 193 SUPERFAMILY SSF81452 3 191 1.19E-36 T 20-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APS56_RS13020 7acf9bd0793f4c155117c642b6619228 193 Gene3D G3DSA:1.20.120.80 14 192 1.5E-40 T 20-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 APS56_RS13020 7acf9bd0793f4c155117c642b6619228 193 PANTHER PTHR11403:SF0 19 193 7.1E-23 T 20-04-2016 APS56_RS12735 19ff31024fde03d283987368106f8669 360 SUPERFAMILY SSF56112 3 349 1.01E-25 T 20-04-2016 IPR011009 Protein kinase-like domain APS56_RS12735 19ff31024fde03d283987368106f8669 360 Pfam PF01636 Phosphotransferase enzyme family 23 262 5.2E-14 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase APS56_RS12735 19ff31024fde03d283987368106f8669 360 Gene3D G3DSA:3.90.1200.10 129 347 8.9E-13 T 20-04-2016 APS56_RS13860 2589789fda2d7a533335f1d167820d8c 232 PANTHER PTHR30471:SF3 5 232 1.8E-85 T 20-04-2016 APS56_RS13860 2589789fda2d7a533335f1d167820d8c 232 Gene3D G3DSA:3.40.140.10 108 231 8.5E-42 T 20-04-2016 APS56_RS13860 2589789fda2d7a533335f1d167820d8c 232 PANTHER PTHR30471 5 232 1.8E-85 T 20-04-2016 APS56_RS13860 2589789fda2d7a533335f1d167820d8c 232 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 181 186 - T 20-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APS56_RS13860 2589789fda2d7a533335f1d167820d8c 232 TIGRFAM TIGR00608 radc: DNA repair protein RadC 18 231 6.3E-57 T 20-04-2016 IPR001405 RadC protein APS56_RS13860 2589789fda2d7a533335f1d167820d8c 232 Pfam PF04002 RadC-like JAB domain 111 230 1.6E-39 T 20-04-2016 IPR025657 RadC-like JAB domain APS56_RS10590 98872b8612fab4e7b6e2d7fbf5e57037 246 Gene3D G3DSA:3.40.1130.10 68 233 9.6E-23 T 20-04-2016 APS56_RS10590 98872b8612fab4e7b6e2d7fbf5e57037 246 SMART SM00563 77 191 8.6E-22 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS10590 98872b8612fab4e7b6e2d7fbf5e57037 246 Pfam PF01553 Acyltransferase 68 187 1.8E-20 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS10590 98872b8612fab4e7b6e2d7fbf5e57037 246 SUPERFAMILY SSF69593 9 241 1.02E-32 T 20-04-2016 APS56_RS10590 98872b8612fab4e7b6e2d7fbf5e57037 246 PANTHER PTHR10434 3 245 1.6E-40 T 20-04-2016 APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 Pfam PF13662 Toprim domain 82 171 7.0E-23 T 20-04-2016 IPR006171 Toprim domain APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 87.6 T 20-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 TIGRFAM TIGR00615 recR: recombination protein RecR 5 196 6.0E-69 T 20-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 20-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 SUPERFAMILY SSF111304 5 199 7.19E-69 T 20-04-2016 IPR023627 Recombination protein RecR APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 PANTHER PTHR30446:SF0 2 201 1.5E-104 T 20-04-2016 APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 SMART SM00493 81 166 6.8E-8 T 20-04-2016 IPR006171 Toprim domain APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 Pfam PF02132 RecR protein 40 79 7.6E-15 T 20-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger APS56_RS16520 3435ce6d01654e0ac78667e3afe80215 205 PANTHER PTHR30446 2 201 1.5E-104 T 20-04-2016 APS56_RS02560 166ac38e0999c03969fa8896442b74b1 140 SUPERFAMILY SSF54909 50 133 6.97E-9 T 20-04-2016 IPR011008 Dimeric alpha-beta barrel APS56_RS02560 166ac38e0999c03969fa8896442b74b1 140 Gene3D G3DSA:3.30.70.900 2 139 1.9E-36 T 20-04-2016 APS56_RS09330 60e4dda705215647f04af3044d64cec5 237 Gene3D G3DSA:1.25.40.10 86 225 6.9E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09330 60e4dda705215647f04af3044d64cec5 237 SUPERFAMILY SSF48452 85 160 6.64E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09330 60e4dda705215647f04af3044d64cec5 237 SUPERFAMILY SSF48452 195 211 6.64E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10905 69c55055dbaa6bf454eba1f0f0921365 136 Pfam PF02130 Uncharacterized protein family UPF0054 12 133 3.3E-28 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APS56_RS10905 69c55055dbaa6bf454eba1f0f0921365 136 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 136 16.896 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APS56_RS10905 69c55055dbaa6bf454eba1f0f0921365 136 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 35 134 1.2E-29 T 20-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APS56_RS10905 69c55055dbaa6bf454eba1f0f0921365 136 SUPERFAMILY SSF55486 5 135 1.56E-36 T 20-04-2016 APS56_RS10905 69c55055dbaa6bf454eba1f0f0921365 136 PANTHER PTHR22881 14 135 4.0E-13 T 20-04-2016 APS56_RS10905 69c55055dbaa6bf454eba1f0f0921365 136 Gene3D G3DSA:3.40.390.30 5 134 1.7E-34 T 20-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APS56_RS10470 7b42b29ef8b8eeadaad9a77a60cbf60c 340 SUPERFAMILY SSF51726 2 338 3.66E-117 T 20-04-2016 APS56_RS10470 7b42b29ef8b8eeadaad9a77a60cbf60c 340 PANTHER PTHR21091:SF2 3 340 2.6E-146 T 20-04-2016 APS56_RS10470 7b42b29ef8b8eeadaad9a77a60cbf60c 340 Gene3D G3DSA:3.20.20.210 2 339 7.9E-145 T 20-04-2016 APS56_RS10470 7b42b29ef8b8eeadaad9a77a60cbf60c 340 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 1 338 7.9E-132 T 20-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10470 7b42b29ef8b8eeadaad9a77a60cbf60c 340 PANTHER PTHR21091 3 340 2.6E-146 T 20-04-2016 APS56_RS10470 7b42b29ef8b8eeadaad9a77a60cbf60c 340 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 19 28 - T 20-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10470 7b42b29ef8b8eeadaad9a77a60cbf60c 340 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 6 337 8.1E-129 T 20-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS10470 7b42b29ef8b8eeadaad9a77a60cbf60c 340 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 3 339 45.035 T 20-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APS56_RS11630 f0c913956d9b828d6f9e679c35f2beb7 271 SUPERFAMILY SSF52402 147 269 6.07E-5 T 20-04-2016 APS56_RS11630 f0c913956d9b828d6f9e679c35f2beb7 271 Gene3D G3DSA:3.40.50.620 2 138 9.1E-15 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS11630 f0c913956d9b828d6f9e679c35f2beb7 271 SUPERFAMILY SSF52402 1 149 6.42E-13 T 20-04-2016 APS56_RS11630 f0c913956d9b828d6f9e679c35f2beb7 271 Pfam PF00582 Universal stress protein family 2 138 2.6E-8 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 9 409 1.8E-195 T 20-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 267 - T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 Gene3D G3DSA:3.40.640.10 64 313 8.0E-82 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 Gene3D G3DSA:3.90.1150.10 314 410 1.7E-38 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 Gene3D G3DSA:3.90.1150.10 6 63 1.7E-38 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 PANTHER PTHR11986:SF18 4 414 7.5E-249 T 20-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 PANTHER PTHR11986 4 414 7.5E-249 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 SUPERFAMILY SSF53383 20 410 4.75E-118 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS00325 841bbd0b53be0fb0826777d23340028f 414 Pfam PF00202 Aminotransferase class-III 21 409 3.7E-117 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS15425 80b3be2892d47b02e79c550366a5fdc8 567 Pfam PF10592 AIPR protein 256 526 3.3E-45 T 20-04-2016 IPR018891 Abortive bacteriophage infection, resistance APS56_RS09530 e5073cb4a6f90141103945a1725d8927 311 SUPERFAMILY SSF51735 96 289 3.56E-46 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09530 e5073cb4a6f90141103945a1725d8927 311 PANTHER PTHR10996 1 308 2.2E-86 T 20-04-2016 APS56_RS09530 e5073cb4a6f90141103945a1725d8927 311 Gene3D G3DSA:3.40.50.720 1 108 2.7E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09530 e5073cb4a6f90141103945a1725d8927 311 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 288 4.8E-49 T 20-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APS56_RS09530 e5073cb4a6f90141103945a1725d8927 311 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 307 3.5E-23 T 20-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APS56_RS09530 e5073cb4a6f90141103945a1725d8927 311 Gene3D G3DSA:3.40.50.720 109 288 4.0E-57 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS09530 e5073cb4a6f90141103945a1725d8927 311 SUPERFAMILY SSF52283 1 130 3.02E-29 T 20-04-2016 APS56_RS08305 0f4216100c0f4cb1efb0d045d2a2b45e 186 Gene3D G3DSA:1.10.10.60 127 174 1.4E-12 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS08305 0f4216100c0f4cb1efb0d045d2a2b45e 186 SMART SM00342 89 173 9.0E-12 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS08305 0f4216100c0f4cb1efb0d045d2a2b45e 186 Pfam PF12833 Helix-turn-helix domain 96 174 9.5E-15 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS08305 0f4216100c0f4cb1efb0d045d2a2b45e 186 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 127 169 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS08305 0f4216100c0f4cb1efb0d045d2a2b45e 186 PANTHER PTHR11019 91 181 1.6E-17 T 20-04-2016 APS56_RS08305 0f4216100c0f4cb1efb0d045d2a2b45e 186 SUPERFAMILY SSF46689 127 174 9.41E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 PANTHER PTHR30173 5 192 8.5E-42 T 20-04-2016 APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 TIGRFAM TIGR02985 Sig70_bacteroi1: RNA polymerase sigma-70 factor, Bacteroides expansion family 1 21 175 1.3E-40 T 20-04-2016 IPR014327 RNA polymerase sigma-70, Bacteroidetes type APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 174 3.4E-20 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 SUPERFAMILY SSF88946 6 104 3.22E-17 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 Gene3D G3DSA:1.10.1740.10 5 111 2.5E-17 T 20-04-2016 APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 PANTHER PTHR30173:SF20 5 192 8.5E-42 T 20-04-2016 APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 SUPERFAMILY SSF88659 122 175 1.59E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 Gene3D G3DSA:1.10.10.10 112 176 3.6E-14 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 Pfam PF04542 Sigma-70 region 2 36 89 9.5E-6 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS09850 44b3964de8ef6bd75c989b6304ab577b 192 Pfam PF08281 Sigma-70, region 4 125 169 3.8E-11 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS08265 12b47e31c06536a3e8043df453332440 117 Gene3D G3DSA:3.30.70.100 20 87 4.0E-11 T 20-04-2016 APS56_RS08265 12b47e31c06536a3e8043df453332440 117 SUPERFAMILY SSF55008 18 88 3.93E-11 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS08265 12b47e31c06536a3e8043df453332440 117 Pfam PF00403 Heavy-metal-associated domain 28 86 2.5E-6 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.6E-36 T 20-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 7.3E-31 T 20-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 Gene3D G3DSA:1.10.150.20 138 179 1.1E-7 T 20-04-2016 APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 PANTHER PTHR21349 1 123 5.5E-40 T 20-04-2016 APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 SUPERFAMILY SSF141091 1 101 1.44E-34 T 20-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 Gene3D G3DSA:2.40.50.140 68 129 1.8E-4 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 24.754 T 20-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 20-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS11910 7053bb5e197ff213cbbbcad50bfb9db7 223 Pfam PF14520 Helix-hairpin-helix domain 141 179 3.0E-6 T 20-04-2016 APS56_RS06885 58dddffd9e1f3688cdce1477f115a320 229 Pfam PF13280 WYL domain 145 228 4.0E-13 T 20-04-2016 IPR026881 WYL domain APS56_RS06885 58dddffd9e1f3688cdce1477f115a320 229 SUPERFAMILY SSF46785 11 67 1.13E-9 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06885 58dddffd9e1f3688cdce1477f115a320 229 PANTHER PTHR34580:SF3 1 228 2.8E-38 T 20-04-2016 APS56_RS06885 58dddffd9e1f3688cdce1477f115a320 229 PANTHER PTHR34580 1 228 2.8E-38 T 20-04-2016 APS56_RS06885 58dddffd9e1f3688cdce1477f115a320 229 Gene3D G3DSA:1.10.10.10 5 68 5.2E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06885 58dddffd9e1f3688cdce1477f115a320 229 Pfam PF08279 HTH domain 12 64 1.6E-12 T 20-04-2016 IPR013196 Helix-turn-helix, type 11 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 SUPERFAMILY SSF103088 336 455 5.76E-37 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 Gene3D G3DSA:3.30.1330.60 335 456 8.7E-41 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 Pfam PF00691 OmpA family 355 450 5.0E-24 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 SUPERFAMILY SSF103647 253 329 9.02E-10 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 SUPERFAMILY SSF103647 200 273 1.31E-9 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 PANTHER PTHR30128 331 457 4.1E-48 T 20-04-2016 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 439 458 4.8E-6 T 20-04-2016 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 401 418 4.8E-6 T 20-04-2016 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 419 438 4.8E-6 T 20-04-2016 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 PRINTS PR01021 OMPA domain signature 401 417 7.7E-13 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 PRINTS PR01021 OMPA domain signature 386 401 7.7E-13 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 PRINTS PR01021 OMPA domain signature 356 378 7.7E-13 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 Pfam PF02412 Thrombospondin type 3 repeat 255 272 0.0051 T 20-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 Pfam PF02412 Thrombospondin type 3 repeat 228 245 0.003 T 20-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 Pfam PF02412 Thrombospondin type 3 repeat 282 300 0.014 T 20-04-2016 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: REACT_16888 APS56_RS11370 279a2e7d04da0e08b7be06ca01bcde36 458 Gene3D G3DSA:4.10.1080.10 200 330 1.7E-16 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS14100 b87d933414e53957f68c05555a3ff9d6 88 Gene3D G3DSA:1.20.80.10 6 84 2.3E-13 T 20-04-2016 IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle APS56_RS14100 b87d933414e53957f68c05555a3ff9d6 88 Pfam PF00887 Acyl CoA binding protein 9 82 1.6E-11 T 20-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 APS56_RS14100 b87d933414e53957f68c05555a3ff9d6 88 SUPERFAMILY SSF47027 6 83 1.31E-16 T 20-04-2016 IPR000582 Acyl-CoA-binding protein, ACBP GO:0000062 APS56_RS11665 4195c21150013f33d7a34b1961910a10 191 Pfam PF00578 AhpC/TSA family 23 163 5.5E-32 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS11665 4195c21150013f33d7a34b1961910a10 191 PANTHER PTHR10681:SF70 144 187 5.2E-48 T 20-04-2016 APS56_RS11665 4195c21150013f33d7a34b1961910a10 191 PANTHER PTHR10681:SF70 23 128 5.2E-48 T 20-04-2016 APS56_RS11665 4195c21150013f33d7a34b1961910a10 191 PANTHER PTHR10681 144 187 5.2E-48 T 20-04-2016 APS56_RS11665 4195c21150013f33d7a34b1961910a10 191 PANTHER PTHR10681 23 128 5.2E-48 T 20-04-2016 APS56_RS11665 4195c21150013f33d7a34b1961910a10 191 Gene3D G3DSA:3.40.30.10 19 188 4.5E-34 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS11665 4195c21150013f33d7a34b1961910a10 191 SUPERFAMILY SSF52833 20 187 2.54E-35 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS02410 bec3959122c017e70ba168b1ecc2a009 102 SUPERFAMILY SSF52833 2 99 5.18E-22 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS02410 bec3959122c017e70ba168b1ecc2a009 102 PANTHER PTHR10438 1 102 3.5E-19 T 20-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APS56_RS02410 bec3959122c017e70ba168b1ecc2a009 102 Gene3D G3DSA:3.40.30.10 2 101 1.8E-22 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS02410 bec3959122c017e70ba168b1ecc2a009 102 Pfam PF00085 Thioredoxin 3 99 4.3E-19 T 20-04-2016 IPR013766 Thioredoxin domain GO:0045454 APS56_RS02730 c7e532cf2e0780ce866547194d9385bb 201 SUPERFAMILY SSF52540 27 148 1.05E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02730 c7e532cf2e0780ce866547194d9385bb 201 Gene3D G3DSA:3.40.50.300 70 186 1.0E-7 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02730 c7e532cf2e0780ce866547194d9385bb 201 Gene3D G3DSA:3.40.50.300 22 69 1.9E-9 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 Pfam PF13715 CarboxypepD_reg-like domain 29 107 6.0E-18 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 SUPERFAMILY SSF49464 28 106 2.22E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 SUPERFAMILY SSF56935 401 630 5.04E-84 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 SUPERFAMILY SSF56935 106 249 5.04E-84 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 SUPERFAMILY SSF56935 657 759 5.04E-84 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 SUPERFAMILY SSF56935 839 882 5.04E-84 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 SUPERFAMILY SSF56935 298 369 5.04E-84 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 SUPERFAMILY SSF56935 922 1011 5.04E-84 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 Gene3D G3DSA:2.170.130.10 117 224 3.6E-23 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 Gene3D G3DSA:2.60.40.1120 29 116 1.5E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 Pfam PF07715 TonB-dependent Receptor Plug Domain 115 221 9.7E-24 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 PANTHER PTHR11532 431 1009 2.0E-255 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 PANTHER PTHR11532 1 345 2.0E-255 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 197 227 1.7E-16 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 Gene3D G3DSA:2.40.170.20 300 776 2.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 Gene3D G3DSA:2.40.170.20 225 241 2.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 Gene3D G3DSA:2.40.170.20 847 872 2.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 Gene3D G3DSA:2.40.170.20 911 1011 2.2E-48 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 PANTHER PTHR11532:SF57 431 1009 2.0E-255 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 PANTHER PTHR11532:SF57 1 345 2.0E-255 T 20-04-2016 APS56_RS11345 dcf737c25019598c42b7c916939ce53c 1011 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 28 1011 8.1E-269 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS07505 c184be81f821fc65a1dfc22419211b04 392 Gene3D G3DSA:3.40.50.620 2 170 4.7E-41 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS07505 c184be81f821fc65a1dfc22419211b04 392 Pfam PF00764 Arginosuccinate synthase 5 386 2.5E-79 T 20-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07505 c184be81f821fc65a1dfc22419211b04 392 PANTHER PTHR11587 1 391 1.2E-101 T 20-04-2016 APS56_RS07505 c184be81f821fc65a1dfc22419211b04 392 Gene3D G3DSA:3.90.1260.10 171 391 1.2E-51 T 20-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07505 c184be81f821fc65a1dfc22419211b04 392 SUPERFAMILY SSF69864 170 390 7.85E-52 T 20-04-2016 APS56_RS07505 c184be81f821fc65a1dfc22419211b04 392 SUPERFAMILY SSF52402 1 183 1.7E-38 T 20-04-2016 APS56_RS07505 c184be81f821fc65a1dfc22419211b04 392 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 7 15 - T 20-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APS56_RS07505 c184be81f821fc65a1dfc22419211b04 392 PANTHER PTHR11587:SF2 1 391 1.2E-101 T 20-04-2016 APS56_RS13090 67e3c24580c6987748ac484d05116076 120 Pfam PF06993 Protein of unknown function (DUF1304) 10 113 2.9E-38 T 20-04-2016 IPR009732 Protein of unknown function DUF1304 APS56_RS13090 67e3c24580c6987748ac484d05116076 120 PANTHER PTHR38446:SF1 2 118 4.5E-29 T 20-04-2016 APS56_RS13090 67e3c24580c6987748ac484d05116076 120 PANTHER PTHR38446 2 118 4.5E-29 T 20-04-2016 APS56_RS14775 fd28a0b7be2b9fba37e341108d792d15 141 Pfam PF07610 Protein of unknown function (DUF1573) 48 91 1.1E-21 T 20-04-2016 IPR011467 Protein of unknown function DUF1573 APS56_RS14775 fd28a0b7be2b9fba37e341108d792d15 141 PANTHER PTHR37833:SF1 1 123 1.6E-20 T 20-04-2016 APS56_RS14775 fd28a0b7be2b9fba37e341108d792d15 141 Gene3D G3DSA:2.60.40.360 24 120 4.3E-23 T 20-04-2016 IPR008962 PapD-like APS56_RS14775 fd28a0b7be2b9fba37e341108d792d15 141 PANTHER PTHR37833 1 123 1.6E-20 T 20-04-2016 APS56_RS05245 3537f9566eede6c7bda99c5d8e9f628b 373 PANTHER PTHR12526:SF1 202 366 3.1E-21 T 20-04-2016 APS56_RS05245 3537f9566eede6c7bda99c5d8e9f628b 373 Gene3D G3DSA:3.40.50.2000 201 351 1.0E-11 T 20-04-2016 APS56_RS05245 3537f9566eede6c7bda99c5d8e9f628b 373 PANTHER PTHR12526 202 366 3.1E-21 T 20-04-2016 APS56_RS05245 3537f9566eede6c7bda99c5d8e9f628b 373 Pfam PF00534 Glycosyl transferases group 1 186 353 1.3E-20 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS05245 3537f9566eede6c7bda99c5d8e9f628b 373 SUPERFAMILY SSF53756 60 370 1.57E-35 T 20-04-2016 APS56_RS14465 ab5faa4d62a59ff04901adbd05ed71af 341 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 103 319 1.0E-15 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS14465 ab5faa4d62a59ff04901adbd05ed71af 341 SUPERFAMILY SSF56219 97 337 6.94E-36 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS14465 ab5faa4d62a59ff04901adbd05ed71af 341 Gene3D G3DSA:3.60.10.10 97 337 2.8E-16 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS04945 061c15e0df990e9299e45b87dcbe4679 249 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 39.554 T 20-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APS56_RS04945 061c15e0df990e9299e45b87dcbe4679 249 PANTHER PTHR21139 1 248 8.9E-121 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APS56_RS04945 061c15e0df990e9299e45b87dcbe4679 249 Pfam PF00121 Triosephosphate isomerase 4 246 3.1E-94 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APS56_RS04945 061c15e0df990e9299e45b87dcbe4679 249 Gene3D G3DSA:3.20.20.70 1 248 7.6E-105 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS04945 061c15e0df990e9299e45b87dcbe4679 249 SUPERFAMILY SSF51351 1 248 5.63E-93 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APS56_RS04945 061c15e0df990e9299e45b87dcbe4679 249 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.9E-63 T 20-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APS56_RS04945 061c15e0df990e9299e45b87dcbe4679 249 ProSitePatterns PS00171 Triosephosphate isomerase active site. 164 174 - T 20-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APS56_RS07250 85705e3ade76ec9704ec8e56fb877aa3 252 Pfam PF12833 Helix-turn-helix domain 172 249 8.7E-20 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS07250 85705e3ade76ec9704ec8e56fb877aa3 252 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 233 249 3.7E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS07250 85705e3ade76ec9704ec8e56fb877aa3 252 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 218 233 3.7E-6 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS07250 85705e3ade76ec9704ec8e56fb877aa3 252 Gene3D G3DSA:1.10.10.60 201 250 4.1E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS07250 85705e3ade76ec9704ec8e56fb877aa3 252 PANTHER PTHR11019 95 248 4.7E-24 T 20-04-2016 APS56_RS07250 85705e3ade76ec9704ec8e56fb877aa3 252 PANTHER PTHR11019:SF45 95 248 4.7E-24 T 20-04-2016 APS56_RS07250 85705e3ade76ec9704ec8e56fb877aa3 252 SMART SM00342 166 249 4.2E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS07250 85705e3ade76ec9704ec8e56fb877aa3 252 SUPERFAMILY SSF46689 204 249 6.72E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS13060 2083b7c8a10b318ba88bb74af8dc08f5 409 PANTHER PTHR30572 1 409 2.6E-64 T 20-04-2016 APS56_RS13060 2083b7c8a10b318ba88bb74af8dc08f5 409 Pfam PF02687 FtsX-like permease family 285 402 7.1E-17 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS13060 2083b7c8a10b318ba88bb74af8dc08f5 409 Pfam PF12704 MacB-like periplasmic core domain 21 232 2.9E-21 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APS56_RS13000 236872d6b4bb86ee2e2e2d85acecd066 240 SUPERFAMILY SSF74653 169 236 1.57E-7 T 20-04-2016 APS56_RS13000 236872d6b4bb86ee2e2e2d85acecd066 240 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 167 237 3.7E-8 T 20-04-2016 IPR006260 TonB, C-terminal GO:0006810 APS56_RS09400 f70872a5441ecaf0a31f156c9fef6ee1 201 Gene3D G3DSA:3.50.50.60 1 187 5.7E-18 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09400 f70872a5441ecaf0a31f156c9fef6ee1 201 SUPERFAMILY SSF51905 1 186 2.78E-17 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS09400 f70872a5441ecaf0a31f156c9fef6ee1 201 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 133 2.3E-7 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS00575 7e57d9d40473a21fb743991c75921d86 636 Gene3D G3DSA:3.60.21.10 217 419 6.2E-27 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS00575 7e57d9d40473a21fb743991c75921d86 636 Gene3D G3DSA:3.60.21.10 23 139 6.2E-27 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS00575 7e57d9d40473a21fb743991c75921d86 636 SUPERFAMILY SSF56300 24 151 1.04E-24 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS00575 7e57d9d40473a21fb743991c75921d86 636 SUPERFAMILY SSF56300 229 421 1.04E-24 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS00575 7e57d9d40473a21fb743991c75921d86 636 Pfam PF00149 Calcineurin-like phosphoesterase 26 376 1.5E-10 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 PANTHER PTHR20852 120 413 2.1E-74 T 20-04-2016 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 Pfam PF12437 Glutamine synthetase type III N terminal 27 185 3.7E-77 T 20-04-2016 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 PANTHER PTHR20852:SF14 120 413 2.1E-74 T 20-04-2016 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 SUPERFAMILY SSF55931 176 409 1.18E-69 T 20-04-2016 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 SUPERFAMILY SSF55931 455 602 1.18E-69 T 20-04-2016 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 SMART SM01230 186 473 3.7E-43 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 330 345 - T 20-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 Pfam PF00120 Glutamine synthetase, catalytic domain 206 372 7.9E-18 T 20-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 Gene3D G3DSA:3.30.590.10 193 409 4.5E-84 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APS56_RS05070 b934e2acee6d76e8ef0db515c89f3da3 728 Gene3D G3DSA:3.30.590.10 455 596 4.5E-84 T 20-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APS56_RS02590 d43466e1c590888773ef4c787cde121f 194 Pfam PF08818 Domain of unknown function (DU1801) 14 111 6.5E-13 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 APS56_RS02590 d43466e1c590888773ef4c787cde121f 194 SUPERFAMILY SSF159888 3 122 2.88E-22 T 20-04-2016 APS56_RS02590 d43466e1c590888773ef4c787cde121f 194 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 127 186 6.9E-20 T 20-04-2016 APS56_RS02590 d43466e1c590888773ef4c787cde121f 194 PIRSF PIRSF021308 1 192 3.2E-89 T 20-04-2016 IPR016786 Uncharacterised protein YdeI, bacterial APS56_RS09040 fe37f44a34a8adbaad2cd11635b488df 316 SUPERFAMILY SSF51430 3 302 1.57E-33 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS09040 fe37f44a34a8adbaad2cd11635b488df 316 Gene3D G3DSA:3.20.20.100 1 299 3.3E-29 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS09040 fe37f44a34a8adbaad2cd11635b488df 316 PANTHER PTHR11732 1 310 1.7E-62 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APS56_RS09040 fe37f44a34a8adbaad2cd11635b488df 316 Pfam PF00248 Aldo/keto reductase family 4 298 4.8E-27 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS09040 fe37f44a34a8adbaad2cd11635b488df 316 PANTHER PTHR11732:SF2 1 310 1.7E-62 T 20-04-2016 APS56_RS13205 d93a3c6ebbaa6d1b011022b409ad933b 895 Pfam PF13502 AsmA-like C-terminal region 562 786 4.5E-39 T 20-04-2016 IPR032712 AsmA-like, C-terminal APS56_RS01640 5f95afe62966b04cc7c08b17360e8534 124 Gene3D G3DSA:3.10.350.10 72 122 8.3E-11 T 20-04-2016 IPR018392 LysM domain APS56_RS01640 5f95afe62966b04cc7c08b17360e8534 124 SUPERFAMILY SSF54106 72 122 2.09E-7 T 20-04-2016 IPR018392 LysM domain APS56_RS01640 5f95afe62966b04cc7c08b17360e8534 124 SMART SM00257 73 122 1.6E-11 T 20-04-2016 IPR018392 LysM domain APS56_RS01640 5f95afe62966b04cc7c08b17360e8534 124 Pfam PF01476 LysM domain 74 122 2.5E-9 T 20-04-2016 IPR018392 LysM domain APS56_RS16490 42005095478435da4a174f71140ddd41 640 PANTHER PTHR37464 2 318 2.2E-23 T 20-04-2016 APS56_RS16490 42005095478435da4a174f71140ddd41 640 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 1 77 6.6E-18 T 20-04-2016 IPR011933 Double transmembrane domain APS56_RS16490 42005095478435da4a174f71140ddd41 640 Pfam PF07584 Aerotolerance regulator N-terminal 1 76 2.3E-18 T 20-04-2016 IPR024163 Aerotolerance regulator, N-terminal APS56_RS16490 42005095478435da4a174f71140ddd41 640 PANTHER PTHR37464:SF1 2 318 2.2E-23 T 20-04-2016 APS56_RS12020 9509b311a3c1e2feda8a7014c6b001a0 97 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 97 2.3E-18 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS12020 9509b311a3c1e2feda8a7014c6b001a0 97 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 6 78 6.0E-10 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS12020 9509b311a3c1e2feda8a7014c6b001a0 97 Gene3D G3DSA:2.60.15.10 1 97 2.7E-26 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS12020 9509b311a3c1e2feda8a7014c6b001a0 97 SUPERFAMILY SSF51344 1 57 1.96E-13 T 20-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APS56_RS04835 d8c674458163ef2dc6ad173a1f8f7ba2 957 Gene3D G3DSA:1.50.10.10 475 558 1.3E-4 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS04835 d8c674458163ef2dc6ad173a1f8f7ba2 957 SUPERFAMILY SSF48208 434 559 1.07E-5 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS04835 d8c674458163ef2dc6ad173a1f8f7ba2 957 SUPERFAMILY SSF48208 332 401 1.07E-5 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS13405 ef727ed2fa9339bf21a8c286212d46e4 262 Pfam PF02540 NAD synthase 7 249 3.6E-50 T 20-04-2016 IPR022310 NAD/GMP synthase APS56_RS13405 ef727ed2fa9339bf21a8c286212d46e4 262 Gene3D G3DSA:3.40.50.620 2 255 2.8E-66 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS13405 ef727ed2fa9339bf21a8c286212d46e4 262 SUPERFAMILY SSF52402 3 256 1.91E-60 T 20-04-2016 APS56_RS13405 ef727ed2fa9339bf21a8c286212d46e4 262 TIGRFAM TIGR00552 nadE: NAD+ synthetase 3 252 1.3E-52 T 20-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APS56_RS13405 ef727ed2fa9339bf21a8c286212d46e4 262 PANTHER PTHR23090 4 254 1.4E-42 T 20-04-2016 APS56_RS09970 35edf512b17cee790952e0564dc6f7d1 674 Pfam PF14322 Starch-binding associating with outer membrane 31 243 2.8E-14 T 20-04-2016 APS56_RS09970 35edf512b17cee790952e0564dc6f7d1 674 Pfam PF07980 SusD family 354 674 4.6E-48 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS09970 35edf512b17cee790952e0564dc6f7d1 674 SUPERFAMILY SSF48452 27 403 1.8E-105 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09970 35edf512b17cee790952e0564dc6f7d1 674 SUPERFAMILY SSF48452 439 674 1.8E-105 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09970 35edf512b17cee790952e0564dc6f7d1 674 Gene3D G3DSA:1.25.40.10 375 383 8.6E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09970 35edf512b17cee790952e0564dc6f7d1 674 Gene3D G3DSA:1.25.40.10 497 601 8.6E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09970 35edf512b17cee790952e0564dc6f7d1 674 Gene3D G3DSA:1.25.40.10 226 336 8.6E-27 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 PANTHER PTHR12815 26 486 5.2E-119 T 20-04-2016 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 Pfam PF01103 Surface antigen 503 869 4.1E-25 T 20-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 Pfam PF07244 Surface antigen variable number repeat 384 458 3.3E-9 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 Pfam PF07244 Surface antigen variable number repeat 205 292 5.0E-10 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 Pfam PF07244 Surface antigen variable number repeat 295 380 4.7E-12 T 20-04-2016 IPR010827 Surface antigen variable number GO:0019867 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 Gene3D G3DSA:2.40.160.50 697 869 1.2E-64 T 20-04-2016 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 Gene3D G3DSA:2.40.160.50 434 665 1.2E-64 T 20-04-2016 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 PANTHER PTHR12815 695 869 5.2E-119 T 20-04-2016 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 PANTHER PTHR12815 502 649 5.2E-119 T 20-04-2016 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 PIRSF PIRSF006076 11 869 4.7E-182 T 20-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 PANTHER PTHR12815:SF11 695 869 5.2E-119 T 20-04-2016 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 PANTHER PTHR12815:SF11 26 486 5.2E-119 T 20-04-2016 APS56_RS13125 4cc54f91fcebbaf58126a44bb7bb3258 869 PANTHER PTHR12815:SF11 502 649 5.2E-119 T 20-04-2016 APS56_RS08195 0f43a63f4e4bd5d34f29886505a37a8e 425 PANTHER PTHR30474:SF1 3 203 6.8E-114 T 20-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APS56_RS08195 0f43a63f4e4bd5d34f29886505a37a8e 425 PANTHER PTHR30474:SF1 253 421 6.8E-114 T 20-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APS56_RS08195 0f43a63f4e4bd5d34f29886505a37a8e 425 PANTHER PTHR30474 3 203 6.8E-114 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APS56_RS08195 0f43a63f4e4bd5d34f29886505a37a8e 425 PANTHER PTHR30474 253 421 6.8E-114 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APS56_RS08195 0f43a63f4e4bd5d34f29886505a37a8e 425 Pfam PF01098 Cell cycle protein 191 420 1.9E-45 T 20-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APS56_RS07495 ab5a1f2a32cca080aede9c48f07403fa 374 PANTHER PTHR11986 6 374 2.0E-129 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS07495 ab5a1f2a32cca080aede9c48f07403fa 374 Gene3D G3DSA:3.90.1150.10 272 374 1.2E-27 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS07495 ab5a1f2a32cca080aede9c48f07403fa 374 Pfam PF00202 Aminotransferase class-III 15 374 6.5E-91 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS07495 ab5a1f2a32cca080aede9c48f07403fa 374 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 205 242 - T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS07495 ab5a1f2a32cca080aede9c48f07403fa 374 SUPERFAMILY SSF53383 4 374 1.4E-99 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS07495 ab5a1f2a32cca080aede9c48f07403fa 374 PANTHER PTHR11986:SF79 6 374 2.0E-129 T 20-04-2016 APS56_RS07495 ab5a1f2a32cca080aede9c48f07403fa 374 Gene3D G3DSA:3.40.640.10 46 271 4.9E-76 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS07375 d1896daa71648b83b1471b739af4b4f6 246 SUPERFAMILY SSF51161 40 234 4.02E-43 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS07375 d1896daa71648b83b1471b739af4b4f6 246 Gene3D G3DSA:2.160.10.10 117 240 3.2E-27 T 20-04-2016 APS56_RS07375 d1896daa71648b83b1471b739af4b4f6 246 PANTHER PTHR23416 61 230 3.0E-69 T 20-04-2016 APS56_RS07375 d1896daa71648b83b1471b739af4b4f6 246 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 186 221 1.0E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS07375 d1896daa71648b83b1471b739af4b4f6 246 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 136 173 7.1E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS07375 d1896daa71648b83b1471b739af4b4f6 246 Gene3D G3DSA:1.10.3130.10 34 116 1.5E-26 T 20-04-2016 APS56_RS07375 d1896daa71648b83b1471b739af4b4f6 246 PANTHER PTHR23416:SF65 61 230 3.0E-69 T 20-04-2016 APS56_RS16485 69913191de111e774a1e0550e38a46ea 417 PANTHER PTHR11647 1 405 1.6E-104 T 20-04-2016 APS56_RS16485 69913191de111e774a1e0550e38a46ea 417 PANTHER PTHR11647:SF70 1 405 1.6E-104 T 20-04-2016 APS56_RS16485 69913191de111e774a1e0550e38a46ea 417 Gene3D G3DSA:3.20.20.140 75 400 4.6E-70 T 20-04-2016 APS56_RS16485 69913191de111e774a1e0550e38a46ea 417 SUPERFAMILY SSF51556 57 348 4.82E-76 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS16485 69913191de111e774a1e0550e38a46ea 417 SUPERFAMILY SSF51338 361 415 1.58E-12 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS16485 69913191de111e774a1e0550e38a46ea 417 SUPERFAMILY SSF51338 1 56 1.58E-12 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS16485 69913191de111e774a1e0550e38a46ea 417 Gene3D G3DSA:2.30.40.10 1 74 1.3E-14 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS16485 69913191de111e774a1e0550e38a46ea 417 Pfam PF01979 Amidohydrolase family 53 350 2.7E-7 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PIRSF PIRSF500210 2 335 1.0E-123 T 20-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PANTHER PTHR11556 7 335 8.8E-172 T 20-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 Gene3D G3DSA:3.40.190.80 201 332 1.3E-55 T 20-04-2016 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 6 333 41.612 T 20-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 20-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 7 198 2.4E-71 T 20-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 Gene3D G3DSA:3.30.540.10 6 200 1.4E-75 T 20-04-2016 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PIRSF PIRSF000904 2 335 1.4E-121 T 20-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 153 176 7.2E-71 T 20-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 184 207 7.2E-71 T 20-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 210 237 7.2E-71 T 20-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 31 58 7.2E-71 T 20-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 7.2E-71 T 20-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 68 94 7.2E-71 T 20-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APS56_RS09495 86749a80268ca3592585a7acb0a67f98 335 SUPERFAMILY SSF56655 3 331 3.93E-109 T 20-04-2016 APS56_RS14610 43e14d5e3926d1f60d2fd482eedecf6c 490 Pfam PF07980 SusD family 265 460 3.4E-20 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS14610 43e14d5e3926d1f60d2fd482eedecf6c 490 SUPERFAMILY SSF48452 18 489 1.18E-83 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14610 43e14d5e3926d1f60d2fd482eedecf6c 490 Gene3D G3DSA:1.25.40.10 204 308 1.2E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14610 43e14d5e3926d1f60d2fd482eedecf6c 490 Gene3D G3DSA:1.25.40.10 341 430 1.2E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS14610 43e14d5e3926d1f60d2fd482eedecf6c 490 Pfam PF14322 Starch-binding associating with outer membrane 31 224 3.4E-11 T 20-04-2016 APS56_RS12445 ccc1d21c1882dacdd8a226b2424ee727 79 Pfam PF01106 NifU-like domain 10 76 4.9E-26 T 20-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APS56_RS12445 ccc1d21c1882dacdd8a226b2424ee727 79 PANTHER PTHR11178 9 78 3.2E-21 T 20-04-2016 APS56_RS12445 ccc1d21c1882dacdd8a226b2424ee727 79 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 76 7.0E-15 T 20-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APS56_RS12445 ccc1d21c1882dacdd8a226b2424ee727 79 SUPERFAMILY SSF117916 3 78 3.27E-23 T 20-04-2016 APS56_RS16290 7bdeb5e897603b5eeec47a0510d53e34 221 Gene3D G3DSA:1.10.530.10 78 112 8.5E-5 T 20-04-2016 APS56_RS16290 7bdeb5e897603b5eeec47a0510d53e34 221 SUPERFAMILY SSF53955 78 199 5.81E-7 T 20-04-2016 IPR023346 Lysozyme-like domain APS56_RS00950 320e03a9459bfcd21ec632d29f56066b 850 SUPERFAMILY SSF53187 45 337 6.28E-48 T 20-04-2016 APS56_RS00950 320e03a9459bfcd21ec632d29f56066b 850 Gene3D G3DSA:3.40.630.10 49 317 3.7E-27 T 20-04-2016 APS56_RS00950 320e03a9459bfcd21ec632d29f56066b 850 SUPERFAMILY SSF52317 619 844 1.68E-11 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS00950 320e03a9459bfcd21ec632d29f56066b 850 SMART SM00631 51 367 5.5E-4 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APS56_RS00950 320e03a9459bfcd21ec632d29f56066b 850 Pfam PF00246 Zinc carboxypeptidase 58 354 3.6E-19 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APS56_RS11000 c963101e03348257ce2b877b19c6d26e 104 SUPERFAMILY SSF160574 38 98 2.22E-6 T 20-04-2016 APS56_RS16175 1c307c9180a81bebeefeb5b8a45459d1 107 Pfam PF02575 YbaB/EbfC DNA-binding family 9 97 1.4E-19 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APS56_RS16175 1c307c9180a81bebeefeb5b8a45459d1 107 Gene3D G3DSA:3.30.1310.10 1 93 2.2E-30 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APS56_RS16175 1c307c9180a81bebeefeb5b8a45459d1 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 6.0E-17 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APS56_RS16175 1c307c9180a81bebeefeb5b8a45459d1 107 PIRSF PIRSF004555 1 106 7.4E-20 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APS56_RS16175 1c307c9180a81bebeefeb5b8a45459d1 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 95 16.068 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APS56_RS16175 1c307c9180a81bebeefeb5b8a45459d1 107 SUPERFAMILY SSF82607 5 92 4.71E-17 T 20-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APS56_RS05715 4a8c5d796dcc8f7d26e657e7c2cf67ef 194 SUPERFAMILY SSF54001 121 160 1.83E-5 T 20-04-2016 APS56_RS05715 4a8c5d796dcc8f7d26e657e7c2cf67ef 194 SUPERFAMILY SSF54001 39 87 1.83E-5 T 20-04-2016 APS56_RS05715 4a8c5d796dcc8f7d26e657e7c2cf67ef 194 PIRSF PIRSF011444 4 194 1.2E-72 T 20-04-2016 IPR009706 Protein of unknown function DUF1287 APS56_RS05715 4a8c5d796dcc8f7d26e657e7c2cf67ef 194 Pfam PF06940 Domain of unknown function (DUF1287) 29 191 1.5E-69 T 20-04-2016 IPR009706 Protein of unknown function DUF1287 APS56_RS05715 4a8c5d796dcc8f7d26e657e7c2cf67ef 194 Gene3D G3DSA:3.90.1720.10 45 89 1.7E-7 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS05715 4a8c5d796dcc8f7d26e657e7c2cf67ef 194 Gene3D G3DSA:3.90.1720.10 125 179 1.7E-7 T 20-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS05715 4a8c5d796dcc8f7d26e657e7c2cf67ef 194 ProDom PD357862 YIJF PERIPLASMIC ECS4873 PRECURSOR CC1379 SIGNAL DOMAIN PM0035 27 191 4.0E-47 T 20-04-2016 IPR009706 Protein of unknown function DUF1287 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 PANTHER PTHR10229:SF0 10 383 5.3E-155 T 20-04-2016 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 Gene3D G3DSA:3.40.50.300 200 383 2.9E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 Pfam PF01926 50S ribosome-binding GTPase 201 319 1.6E-22 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 Pfam PF16360 GTP-binding GTPase Middle Region 118 196 2.1E-30 T 20-04-2016 IPR032305 GTP-binding protein, middle domain APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 PIRSF PIRSF006809 2 392 1.6E-133 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 SUPERFAMILY SSF52540 199 383 1.52E-42 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 200 344 4.9E-13 T 20-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 202 222 3.7E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 268 286 3.7E-9 T 20-04-2016 IPR006073 GTP binding domain GO:0005525 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 Hamap MF_00900 GTPase HflX [hflX]. 31 388 43.643 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 11 377 1.1E-129 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 Pfam PF13167 GTP-binding GTPase N-terminal 29 116 5.5E-30 T 20-04-2016 IPR025121 GTPase HflX, N-terminal APS56_RS11655 b4df03f4a50bdc38d644b3527b6b74eb 403 PANTHER PTHR10229 10 383 5.3E-155 T 20-04-2016 IPR016496 GTPase HflX GO:0005525 APS56_RS14725 beefc71511d74623a140ff95504496c4 293 TIGRFAM TIGR00510 lipA: lipoyl synthase 12 290 1.1E-106 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APS56_RS14725 beefc71511d74623a140ff95504496c4 293 PANTHER PTHR10949 13 288 6.2E-152 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APS56_RS14725 beefc71511d74623a140ff95504496c4 293 Pfam PF04055 Radical SAM superfamily 69 228 1.7E-15 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS14725 beefc71511d74623a140ff95504496c4 293 SMART SM00729 63 270 3.0E-9 T 20-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APS56_RS14725 beefc71511d74623a140ff95504496c4 293 SUPERFAMILY SSF102114 27 288 5.62E-54 T 20-04-2016 APS56_RS14725 beefc71511d74623a140ff95504496c4 293 Hamap MF_00206 Lipoyl synthase [lipA]. 1 293 128.026 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APS56_RS14725 beefc71511d74623a140ff95504496c4 293 PIRSF PIRSF005963 1 293 3.3E-128 T 20-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APS56_RS14725 beefc71511d74623a140ff95504496c4 293 Gene3D G3DSA:3.20.20.70 31 290 6.2E-61 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS05800 004f21b453498eefcb55677c5d464ea4 122 Pfam PF08818 Domain of unknown function (DU1801) 14 107 3.4E-11 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 APS56_RS05800 004f21b453498eefcb55677c5d464ea4 122 SUPERFAMILY SSF159888 12 114 3.14E-18 T 20-04-2016 APS56_RS04475 2001c4549a234fb3fefd7facc4f48ba8 121 PANTHER PTHR28259 1 121 2.5E-38 T 20-04-2016 APS56_RS04475 2001c4549a234fb3fefd7facc4f48ba8 121 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 121 18.515 T 20-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APS56_RS04475 2001c4549a234fb3fefd7facc4f48ba8 121 TIGRFAM TIGR00494 crcB: protein CrcB 5 119 1.0E-29 T 20-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APS56_RS04475 2001c4549a234fb3fefd7facc4f48ba8 121 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 116 2.1E-25 T 20-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 322 340 - T 20-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 130 144 2.2E-18 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 176 189 2.2E-18 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 31 47 2.2E-18 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 SUPERFAMILY SSF53335 30 343 7.32E-97 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 32 340 1.1E-78 T 20-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 Pfam PF00145 C-5 cytosine-specific DNA methylase 30 340 3.9E-81 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 Gene3D G3DSA:3.40.50.150 27 225 5.5E-72 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 PANTHER PTHR10629 27 347 6.6E-79 T 20-04-2016 APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 91 103 - T 20-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 APS56_RS00210 deed7c6e70db661c86d91a76758891f3 350 Gene3D G3DSA:3.90.120.10 263 328 9.2E-10 T 20-04-2016 APS56_RS06325 53e135394ad4eac2aa05dc4b9cbf003b 412 TIGRFAM TIGR00937 2A51: chromate efflux transporter 23 405 1.5E-73 T 20-04-2016 IPR014047 Chromate transporter, long chain APS56_RS06325 53e135394ad4eac2aa05dc4b9cbf003b 412 PIRSF PIRSF004810 2 411 4.6E-89 T 20-04-2016 IPR014047 Chromate transporter, long chain APS56_RS06325 53e135394ad4eac2aa05dc4b9cbf003b 412 PANTHER PTHR33567 1 409 7.5E-75 T 20-04-2016 APS56_RS06325 53e135394ad4eac2aa05dc4b9cbf003b 412 Pfam PF02417 Chromate transporter 19 183 3.0E-33 T 20-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 APS56_RS06325 53e135394ad4eac2aa05dc4b9cbf003b 412 Pfam PF02417 Chromate transporter 243 405 1.2E-41 T 20-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 APS56_RS07580 98958403660dc444898b61594f92be7c 407 Pfam PF11288 Protein of unknown function (DUF3089) 90 268 8.7E-37 T 20-04-2016 IPR021440 Protein of unknown function DUF3089 APS56_RS07580 98958403660dc444898b61594f92be7c 407 SUPERFAMILY SSF53474 167 227 2.05E-5 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS07580 98958403660dc444898b61594f92be7c 407 Gene3D G3DSA:3.40.50.1820 133 208 2.7E-4 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 PANTHER PTHR13710:SF81 516 570 8.0E-159 T 20-04-2016 APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 PANTHER PTHR13710:SF81 6 340 8.0E-159 T 20-04-2016 APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 SMART SM00487 13 209 1.3E-31 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 Pfam PF00270 DEAD/DEAH box helicase 19 181 1.7E-18 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 PANTHER PTHR13710 516 570 8.0E-159 T 20-04-2016 APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 PANTHER PTHR13710 6 340 8.0E-159 T 20-04-2016 APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 Gene3D G3DSA:3.40.50.300 194 354 1.6E-37 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 Gene3D G3DSA:3.40.50.300 5 191 1.0E-50 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 SMART SM00490 240 321 1.1E-24 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 Pfam PF16124 RecQ zinc-binding 511 564 4.3E-10 T 20-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 Pfam PF00271 Helicase conserved C-terminal domain 219 321 8.0E-21 T 20-04-2016 IPR001650 Helicase, C-terminal APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 404 3.2E-111 T 20-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 SUPERFAMILY SSF52540 56 336 7.34E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15835 2c2c792565bc0005549c5cffebb22b0b 634 Gene3D G3DSA:1.10.10.10 517 571 1.6E-12 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05085 ab4db4a276463dce7e85da63909bf574 314 PANTHER PTHR10846 18 307 4.7E-45 T 20-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 APS56_RS05085 ab4db4a276463dce7e85da63909bf574 314 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 305 7.3E-68 T 20-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 APS56_RS05085 ab4db4a276463dce7e85da63909bf574 314 Pfam PF01699 Sodium/calcium exchanger protein 167 311 4.8E-27 T 20-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APS56_RS05085 ab4db4a276463dce7e85da63909bf574 314 Pfam PF01699 Sodium/calcium exchanger protein 2 143 1.5E-26 T 20-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 182 201 - T 20-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 PIRSF PIRSF000525 1 354 5.9E-124 T 20-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 Gene3D G3DSA:3.90.1150.10 253 353 1.1E-30 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 SUPERFAMILY SSF53383 2 351 1.72E-97 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 1 354 42.726 T 20-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 PANTHER PTHR21152:SF1 4 353 5.8E-135 T 20-04-2016 APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 PANTHER PTHR21152 4 353 5.8E-135 T 20-04-2016 APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 Gene3D G3DSA:3.40.640.10 16 250 3.3E-86 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS00695 aa74a7ffff4b67a7974f4bd2744964c3 354 Pfam PF00266 Aminotransferase class-V 5 342 6.0E-38 T 20-04-2016 IPR000192 Aminotransferase class V domain APS56_RS00145 ce06d18cb60e822cf7535232b1e64e56 279 PANTHER PTHR30329 128 277 1.2E-27 T 20-04-2016 APS56_RS00145 ce06d18cb60e822cf7535232b1e64e56 279 Pfam PF00691 OmpA family 151 250 2.3E-22 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS00145 ce06d18cb60e822cf7535232b1e64e56 279 SUPERFAMILY SSF103088 131 256 1.7E-30 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS00145 ce06d18cb60e822cf7535232b1e64e56 279 Gene3D G3DSA:3.30.1330.60 131 256 5.1E-31 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 SUPERFAMILY SSF56024 262 456 1.37E-39 T 20-04-2016 APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 PANTHER PTHR21248 11 473 4.8E-96 T 20-04-2016 APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 SUPERFAMILY SSF56024 91 304 6.8E-48 T 20-04-2016 APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 Gene3D G3DSA:3.30.870.10 110 300 5.2E-44 T 20-04-2016 APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 SMART SM00155 386 413 0.0017 T 20-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 SMART SM00155 210 237 0.0068 T 20-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 PANTHER PTHR21248:SF5 11 473 4.8E-96 T 20-04-2016 APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 Pfam PF13396 Phospholipase_D-nuclease N-terminal 11 52 8.9E-8 T 20-04-2016 IPR027379 Cardiolipin synthase N-terminal APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 Gene3D G3DSA:3.30.870.10 301 439 6.2E-31 T 20-04-2016 APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 Pfam PF13091 PLD-like domain 315 438 3.1E-26 T 20-04-2016 IPR025202 Phospholipase D-like domain APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 Pfam PF13091 PLD-like domain 128 246 2.0E-11 T 20-04-2016 IPR025202 Phospholipase D-like domain APS56_RS00415 54d2ae032e5765a9c1d573049c54af74 473 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 4 473 1.1E-125 T 20-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 Gene3D G3DSA:3.40.720.10 34 256 1.7E-116 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 Gene3D G3DSA:3.40.720.10 310 441 1.7E-116 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 PANTHER PTHR10342 5 233 3.4E-167 T 20-04-2016 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 PANTHER PTHR10342 313 545 3.4E-167 T 20-04-2016 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 Pfam PF16347 Domain of unknown function (DUF4976) 425 526 2.4E-43 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 PANTHER PTHR10342:SF237 5 233 3.4E-167 T 20-04-2016 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 PANTHER PTHR10342:SF237 313 545 3.4E-167 T 20-04-2016 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 Pfam PF00884 Sulfatase 37 421 3.1E-64 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 SUPERFAMILY SSF53649 322 526 8.77E-127 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 SUPERFAMILY SSF53649 35 268 8.77E-127 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 Gene3D G3DSA:3.30.1120.10 451 534 2.2E-18 T 20-04-2016 APS56_RS06090 b7695f995d4f9b322a89265b171cbf15 553 ProSitePatterns PS00523 Sulfatases signature 1. 83 95 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS16570 83fb0721da4e87b86f778bc5a03d1e0e 354 Gene3D G3DSA:3.40.710.10 51 330 1.1E-27 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS16570 83fb0721da4e87b86f778bc5a03d1e0e 354 PANTHER PTHR22935 70 277 3.9E-12 T 20-04-2016 APS56_RS16570 83fb0721da4e87b86f778bc5a03d1e0e 354 SUPERFAMILY SSF56601 6 351 2.31E-57 T 20-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APS56_RS16570 83fb0721da4e87b86f778bc5a03d1e0e 354 Pfam PF00144 Beta-lactamase 70 325 4.1E-21 T 20-04-2016 IPR001466 Beta-lactamase-related APS56_RS07450 83f05047a2f842fc6d7f4261f85765b6 372 SMART SM01329 4 347 2.3E-157 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS07450 83f05047a2f842fc6d7f4261f85765b6 372 PANTHER PTHR11835 4 359 9.6E-155 T 20-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APS56_RS07450 83f05047a2f842fc6d7f4261f85765b6 372 PANTHER PTHR11835:SF35 4 359 9.6E-155 T 20-04-2016 APS56_RS07450 83f05047a2f842fc6d7f4261f85765b6 372 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 344 8.6E-126 T 20-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APS56_RS07450 83f05047a2f842fc6d7f4261f85765b6 372 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 347 9.0E-117 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS07450 83f05047a2f842fc6d7f4261f85765b6 372 Gene3D G3DSA:3.40.718.10 2 351 9.6E-115 T 20-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APS56_RS07450 83f05047a2f842fc6d7f4261f85765b6 372 SUPERFAMILY SSF53659 1 350 1.06E-109 T 20-04-2016 APS56_RS04205 d0c411caa192446155f428d1edd3d2b1 370 Gene3D G3DSA:3.40.50.2000 154 338 2.0E-16 T 20-04-2016 APS56_RS04205 d0c411caa192446155f428d1edd3d2b1 370 SUPERFAMILY SSF53756 3 368 1.18E-60 T 20-04-2016 APS56_RS04205 d0c411caa192446155f428d1edd3d2b1 370 PANTHER PTHR12526 1 368 6.8E-40 T 20-04-2016 APS56_RS04205 d0c411caa192446155f428d1edd3d2b1 370 Pfam PF00534 Glycosyl transferases group 1 179 342 7.6E-24 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS04205 d0c411caa192446155f428d1edd3d2b1 370 Pfam PF13439 Glycosyltransferase Family 4 12 166 1.1E-10 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS06275 280089beeccea1209621e8883f2d21dd 379 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 313 379 3.3E-11 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 SUPERFAMILY SSF52540 1 336 1.23E-41 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 PANTHER PTHR32182 1 356 1.7E-48 T 20-04-2016 APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 PANTHER PTHR32182:SF0 1 356 1.7E-48 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 20-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 Gene3D G3DSA:3.40.50.300 1 189 3.1E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 Gene3D G3DSA:3.40.50.300 235 344 3.1E-32 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 75.979 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 348 1.0E-78 T 20-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 350 3.9E-14 T 20-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APS56_RS14425 ac3c0a5e9fa6ae266545b348d7223840 359 ProSitePatterns PS00618 RecF protein signature 2. 303 321 - T 20-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APS56_RS12065 65656d0bec4c3a06015f016ae333610d 323 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 15 318 2.0E-15 T 20-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APS56_RS12065 65656d0bec4c3a06015f016ae333610d 323 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 11 303 9.6E-33 T 20-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APS56_RS12065 65656d0bec4c3a06015f016ae333610d 323 PANTHER PTHR39087 7 321 2.9E-14 T 20-04-2016 APS56_RS00275 2a8448d1821a3897880d839c3f13c73a 166 PANTHER PTHR23091 1 165 5.9E-18 T 20-04-2016 APS56_RS00275 2a8448d1821a3897880d839c3f13c73a 166 SUPERFAMILY SSF55729 1 155 3.09E-27 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS00275 2a8448d1821a3897880d839c3f13c73a 166 Pfam PF13673 Acetyltransferase (GNAT) domain 38 149 6.2E-16 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS00275 2a8448d1821a3897880d839c3f13c73a 166 Gene3D G3DSA:3.40.630.30 3 152 3.5E-29 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS02630 0b0f2bdb5cf62eafe8e8f568748c650d 136 SUPERFAMILY SSF55298 7 135 1.32E-23 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APS56_RS02630 0b0f2bdb5cf62eafe8e8f568748c650d 136 Gene3D G3DSA:3.30.1330.40 2 135 7.9E-32 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APS56_RS02630 0b0f2bdb5cf62eafe8e8f568748c650d 136 Pfam PF01042 Endoribonuclease L-PSP 18 131 1.8E-16 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family APS56_RS02630 0b0f2bdb5cf62eafe8e8f568748c650d 136 PANTHER PTHR11803 2 135 5.3E-22 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family APS56_RS00770 402e930d0ad17101afa6c585dcfb42cf 151 Gene3D G3DSA:2.130.10.10 4 74 5.4E-4 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS00770 402e930d0ad17101afa6c585dcfb42cf 151 SUPERFAMILY SSF63825 4 92 3.4E-7 T 20-04-2016 APS56_RS00770 402e930d0ad17101afa6c585dcfb42cf 151 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 84 150 4.6E-11 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS00910 c7eee5876e5cd1c51efdb0c17106ad51 194 PANTHER PTHR41729 3 194 3.6E-62 T 20-04-2016 APS56_RS00910 c7eee5876e5cd1c51efdb0c17106ad51 194 PANTHER PTHR41729:SF1 3 194 3.6E-62 T 20-04-2016 APS56_RS00910 c7eee5876e5cd1c51efdb0c17106ad51 194 Pfam PF13875 Domain of unknown function (DUF4202) 8 188 4.7E-69 T 20-04-2016 IPR025255 Protein of unknown function DUF4202 APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 Pfam PF16384 Domain of unknown function 327 584 1.2E-7 T 20-04-2016 IPR032156 Domain of unknown function DUF4993 APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 Pfam PF02469 Fasciclin domain 634 771 1.2E-5 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 Pfam PF02469 Fasciclin domain 47 121 3.0E-5 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 SUPERFAMILY SSF82153 634 716 6.54E-5 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 Gene3D G3DSA:2.30.180.10 605 771 2.4E-5 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 Gene3D G3DSA:2.30.180.10 36 156 1.2E-17 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 Gene3D G3DSA:2.30.180.10 205 236 1.2E-17 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 SUPERFAMILY SSF82153 210 239 7.59E-14 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06180 2f81074974ff521f98f6f6fd6be2ea0f 772 SUPERFAMILY SSF82153 35 140 7.59E-14 T 20-04-2016 IPR000782 FAS1 domain APS56_RS16410 de28199862baa0d73c4559e73c5efa63 319 Pfam PF07949 YbbR-like protein 143 215 4.0E-6 T 20-04-2016 IPR012505 YbbR-like APS56_RS16020 1313c1363c17ec147381ab999b085a0a 175 Pfam PF14300 Domain of unknown function (DUF4375) 55 173 5.0E-31 T 20-04-2016 IPR025402 Domain of unknown function DUF4375 APS56_RS16075 1313c1363c17ec147381ab999b085a0a 175 Pfam PF14300 Domain of unknown function (DUF4375) 55 173 5.0E-31 T 20-04-2016 IPR025402 Domain of unknown function DUF4375 APS56_RS03865 56670ef308474f4701ec28dc64c40ee6 112 PANTHER PTHR21011 1 95 1.9E-24 T 20-04-2016 APS56_RS03865 56670ef308474f4701ec28dc64c40ee6 112 Pfam PF01250 Ribosomal protein S6 3 91 6.9E-27 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS03865 56670ef308474f4701ec28dc64c40ee6 112 Gene3D G3DSA:3.30.70.60 1 98 5.7E-33 T 20-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APS56_RS03865 56670ef308474f4701ec28dc64c40ee6 112 SUPERFAMILY SSF54995 1 98 1.7E-31 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS03865 56670ef308474f4701ec28dc64c40ee6 112 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.4E-23 T 20-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS03865 56670ef308474f4701ec28dc64c40ee6 112 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 19.177 T 20-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APS56_RS03865 56670ef308474f4701ec28dc64c40ee6 112 PANTHER PTHR21011:SF1 1 95 1.9E-24 T 20-04-2016 APS56_RS08745 d49f4fbb3ef89c6a29f97db8c5685059 530 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 302 313 - T 20-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APS56_RS08745 d49f4fbb3ef89c6a29f97db8c5685059 530 PANTHER PTHR11699:SF69 7 530 3.8E-232 T 20-04-2016 APS56_RS08745 d49f4fbb3ef89c6a29f97db8c5685059 530 SUPERFAMILY SSF53720 22 500 1.57E-95 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APS56_RS08745 d49f4fbb3ef89c6a29f97db8c5685059 530 Gene3D G3DSA:3.40.605.10 23 288 6.2E-52 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APS56_RS08745 d49f4fbb3ef89c6a29f97db8c5685059 530 PANTHER PTHR11699 7 530 3.8E-232 T 20-04-2016 APS56_RS08745 d49f4fbb3ef89c6a29f97db8c5685059 530 Gene3D G3DSA:3.40.309.10 289 475 2.0E-44 T 20-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APS56_RS08745 d49f4fbb3ef89c6a29f97db8c5685059 530 Pfam PF00171 Aldehyde dehydrogenase family 41 495 9.4E-93 T 20-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APS56_RS00515 27b5f9c4f81ea915f56a94ee742dd4c1 129 PANTHER PTHR31793 4 129 8.6E-15 T 20-04-2016 APS56_RS00515 27b5f9c4f81ea915f56a94ee742dd4c1 129 SUPERFAMILY SSF54637 3 128 2.93E-32 T 20-04-2016 IPR029069 HotDog domain APS56_RS00515 27b5f9c4f81ea915f56a94ee742dd4c1 129 Pfam PF01643 Acyl-ACP thioesterase 2 37 3.4E-6 T 20-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 APS56_RS00515 27b5f9c4f81ea915f56a94ee742dd4c1 129 Pfam PF01643 Acyl-ACP thioesterase 50 127 6.0E-9 T 20-04-2016 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 APS56_RS00515 27b5f9c4f81ea915f56a94ee742dd4c1 129 Gene3D G3DSA:3.10.129.10 2 128 1.2E-27 T 20-04-2016 IPR029069 HotDog domain APS56_RS06910 46c2647411a3454b84b33d6ca3715f3b 70 Pfam PF14117 Domain of unknown function (DUF4287) 2 66 4.6E-26 T 20-04-2016 IPR025629 Protein of unknown function DUF4287 APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 2.5E-17 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 2.5E-17 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 2.5E-17 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.5E-17 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 SMART SM00418 6 88 1.4E-25 T 20-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 Gene3D G3DSA:1.10.10.10 4 85 5.0E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 PANTHER PTHR33154 1 96 1.2E-23 T 20-04-2016 APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 SUPERFAMILY SSF46785 2 85 2.9E-24 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05680 59c056441f4473067f86b426b9d518aa 111 Pfam PF12840 Helix-turn-helix domain 7 66 4.6E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS01370 35d79d37dabe5751c4ab9f6164f8a50a 370 Pfam PF14289 Domain of unknown function (DUF4369) 16 117 1.9E-17 T 20-04-2016 IPR025380 Domain of unknown function DUF4369 APS56_RS01370 35d79d37dabe5751c4ab9f6164f8a50a 370 Pfam PF00578 AhpC/TSA family 233 353 3.5E-25 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS01370 35d79d37dabe5751c4ab9f6164f8a50a 370 Gene3D G3DSA:3.40.30.10 231 367 3.8E-50 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS01370 35d79d37dabe5751c4ab9f6164f8a50a 370 SUPERFAMILY SSF52833 229 369 1.16E-32 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS01370 35d79d37dabe5751c4ab9f6164f8a50a 370 ProSitePatterns PS00194 Thioredoxin family active site. 261 279 - T 20-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APS56_RS01370 35d79d37dabe5751c4ab9f6164f8a50a 370 PANTHER PTHR13871 239 357 2.3E-25 T 20-04-2016 APS56_RS14500 fd56be40a2bd760de041ceb5b0e4ff78 254 PANTHER PTHR13696:SF52 1 253 5.5E-88 T 20-04-2016 APS56_RS14500 fd56be40a2bd760de041ceb5b0e4ff78 254 PANTHER PTHR13696 1 253 5.5E-88 T 20-04-2016 APS56_RS14500 fd56be40a2bd760de041ceb5b0e4ff78 254 Gene3D G3DSA:3.40.50.300 3 252 4.1E-71 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14500 fd56be40a2bd760de041ceb5b0e4ff78 254 Pfam PF13614 AAA domain 2 178 5.8E-67 T 20-04-2016 IPR025669 AAA domain APS56_RS14500 fd56be40a2bd760de041ceb5b0e4ff78 254 SUPERFAMILY SSF52540 1 252 3.81E-65 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS14095 bc1394e45094a4fb2861ab5a04e0db1b 305 PANTHER PTHR12737 82 304 3.2E-17 T 20-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 APS56_RS14095 bc1394e45094a4fb2861ab5a04e0db1b 305 Gene3D G3DSA:3.75.10.10 5 304 1.2E-54 T 20-04-2016 APS56_RS14095 bc1394e45094a4fb2861ab5a04e0db1b 305 Pfam PF02274 Amidinotransferase 82 304 3.5E-17 T 20-04-2016 APS56_RS14095 bc1394e45094a4fb2861ab5a04e0db1b 305 SUPERFAMILY SSF55909 6 305 6.67E-42 T 20-04-2016 APS56_RS10745 91945f2596739cacc85fcd6c3b4e2c14 450 PANTHER PTHR30576:SF0 21 450 2.0E-106 T 20-04-2016 APS56_RS10745 91945f2596739cacc85fcd6c3b4e2c14 450 Pfam PF13727 CoA-binding domain 58 222 2.8E-10 T 20-04-2016 APS56_RS10745 91945f2596739cacc85fcd6c3b4e2c14 450 PANTHER PTHR30576 21 450 2.0E-106 T 20-04-2016 APS56_RS10745 91945f2596739cacc85fcd6c3b4e2c14 450 Pfam PF02397 Bacterial sugar transferase 259 443 8.6E-57 T 20-04-2016 IPR003362 Bacterial sugar transferase APS56_RS10745 91945f2596739cacc85fcd6c3b4e2c14 450 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 447 1.8E-112 T 20-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APS56_RS10745 91945f2596739cacc85fcd6c3b4e2c14 450 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 450 3.0E-125 T 20-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 APS56_RS09790 7052f79d3f749180f4afffead4842649 218 SUPERFAMILY SSF52266 26 217 1.25E-26 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS09790 7052f79d3f749180f4afffead4842649 218 Gene3D G3DSA:3.40.50.1110 26 217 1.7E-25 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS09790 7052f79d3f749180f4afffead4842649 218 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 27 208 3.7E-14 T 20-04-2016 IPR001087 GDSL lipase/esterase GO:0016788 APS56_RS03565 87e96a69059338825182802b71c192e7 284 Pfam PF09084 NMT1/THI5 like 18 212 2.9E-5 T 20-04-2016 IPR015168 SsuA/THI5-like APS56_RS03565 87e96a69059338825182802b71c192e7 284 SUPERFAMILY SSF53850 3 222 1.54E-25 T 20-04-2016 APS56_RS03565 87e96a69059338825182802b71c192e7 284 PANTHER PTHR30024 3 264 1.1E-49 T 20-04-2016 APS56_RS03565 87e96a69059338825182802b71c192e7 284 Gene3D G3DSA:3.40.190.10 89 208 2.9E-7 T 20-04-2016 APS56_RS03565 87e96a69059338825182802b71c192e7 284 PANTHER PTHR30024:SF1 3 264 1.1E-49 T 20-04-2016 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 SUPERFAMILY SSF47203 243 389 2.26E-42 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 Gene3D G3DSA:1.10.540.10 8 133 3.5E-40 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 SUPERFAMILY SSF56645 6 237 7.59E-76 T 20-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 19 131 6.4E-34 T 20-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 Gene3D G3DSA:1.20.140.10 226 388 2.1E-48 T 20-04-2016 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 PANTHER PTHR10909 9 392 8.0E-180 T 20-04-2016 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 Gene3D G3DSA:2.40.110.10 134 225 1.5E-32 T 20-04-2016 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 383 1.4E-33 T 20-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 PANTHER PTHR10909:SF152 9 392 8.0E-180 T 20-04-2016 APS56_RS12525 a4e555b3a733d8195082c9afd3332b1f 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 135 226 1.2E-20 T 20-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APS56_RS01020 27f77bdf20033fa381f28145a0ebc79d 449 Pfam PF07586 Protein of unknown function (DUF1552) 45 355 6.0E-77 T 20-04-2016 IPR011447 Protein of unknown function DUF1552 APS56_RS03725 6ff710f6b0d28625c59dd5314ebc107d 281 PANTHER PTHR18866 145 256 4.4E-12 T 20-04-2016 APS56_RS03725 6ff710f6b0d28625c59dd5314ebc107d 281 PANTHER PTHR18866:SF74 145 256 4.4E-12 T 20-04-2016 APS56_RS03725 6ff710f6b0d28625c59dd5314ebc107d 281 Pfam PF02626 Allophanate hydrolase subunit 2 24 279 1.3E-62 T 20-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APS56_RS03725 6ff710f6b0d28625c59dd5314ebc107d 281 SMART SM00797 23 280 4.1E-43 T 20-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF49464 16 97 3.66E-14 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 Gene3D G3DSA:2.60.40.1120 18 107 2.1E-10 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 Pfam PF07715 TonB-dependent Receptor Plug Domain 107 214 1.2E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 18 1034 4.6E-231 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 PANTHER PTHR11532 552 1032 1.3E-231 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 Gene3D G3DSA:2.170.130.10 108 223 3.0E-15 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF56935 697 798 1.05E-58 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF56935 579 669 1.05E-58 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF56935 880 914 1.05E-58 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF56935 533 545 1.05E-58 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF56935 426 481 1.05E-58 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF56935 309 387 1.05E-58 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF56935 97 242 1.05E-58 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 SUPERFAMILY SSF56935 951 1001 1.05E-58 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 PANTHER PTHR11532:SF57 7 405 1.3E-231 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 PANTHER PTHR11532:SF57 552 1032 1.3E-231 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 PANTHER PTHR11532 7 405 1.3E-231 T 20-04-2016 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 190 220 2.2E-17 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS15550 59ab506fb3bb85f27dfb893ff7c33b4e 1034 Pfam PF13715 CarboxypepD_reg-like domain 18 99 1.5E-13 T 20-04-2016 APS56_RS09515 322e2993593f51c0cc16e6bc2ab411c2 120 PANTHER PTHR34980 1 117 4.3E-24 T 20-04-2016 APS56_RS09515 322e2993593f51c0cc16e6bc2ab411c2 120 Pfam PF05656 Protein of unknown function (DUF805) 11 107 5.1E-29 T 20-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APS56_RS09515 322e2993593f51c0cc16e6bc2ab411c2 120 PANTHER PTHR34980:SF2 1 117 4.3E-24 T 20-04-2016 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 Pfam PF14310 Fibronectin type III-like domain 672 740 1.2E-18 T 20-04-2016 IPR026891 Fibronectin type III-like domain APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 410 635 7.1E-42 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PANTHER PTHR30620:SF37 86 753 1.2E-228 T 20-04-2016 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PANTHER PTHR30620:SF37 7 59 1.2E-228 T 20-04-2016 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PANTHER PTHR30620 86 753 1.2E-228 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PANTHER PTHR30620 7 59 1.2E-228 T 20-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PRINTS PR00133 Glycosyl hydrolase family 3 signature 114 130 4.2E-17 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PRINTS PR00133 Glycosyl hydrolase family 3 signature 137 156 4.2E-17 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PRINTS PR00133 Glycosyl hydrolase family 3 signature 292 310 4.2E-17 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PRINTS PR00133 Glycosyl hydrolase family 3 signature 221 237 4.2E-17 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 PRINTS PR00133 Glycosyl hydrolase family 3 signature 183 199 4.2E-17 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 Gene3D G3DSA:3.20.20.300 24 392 5.0E-101 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 Gene3D G3DSA:3.40.50.1700 397 638 2.3E-51 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 SUPERFAMILY SSF51445 24 409 2.95E-92 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 44 371 9.9E-59 T 20-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 SUPERFAMILY SSF52279 410 638 1.44E-40 T 20-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APS56_RS06025 c518759d59efbad2b51b5d9a4e9123ea 753 SMART SM01217 672 741 3.1E-28 T 20-04-2016 IPR026891 Fibronectin type III-like domain APS56_RS02330 66c706c8bd9bee48a8bcac7d4b188e3c 137 Pfam PF04134 Protein of unknown function, DUF393 11 121 3.0E-29 T 20-04-2016 IPR007263 Protein of unknown function DUF393 APS56_RS02330 66c706c8bd9bee48a8bcac7d4b188e3c 137 PANTHER PTHR33639 8 137 4.5E-42 T 20-04-2016 APS56_RS10645 b529d1680c8055d2ebfbaa191ff6f678 144 Pfam PF00692 dUTPase 12 142 3.9E-32 T 20-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APS56_RS10645 b529d1680c8055d2ebfbaa191ff6f678 144 Gene3D G3DSA:2.70.40.10 6 143 1.4E-52 T 20-04-2016 IPR029054 dUTPase-like APS56_RS10645 b529d1680c8055d2ebfbaa191ff6f678 144 SUPERFAMILY SSF51283 6 143 7.59E-49 T 20-04-2016 IPR029054 dUTPase-like APS56_RS10645 b529d1680c8055d2ebfbaa191ff6f678 144 PANTHER PTHR11241 1 143 6.8E-54 T 20-04-2016 APS56_RS10645 b529d1680c8055d2ebfbaa191ff6f678 144 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 143 32.134 T 20-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APS56_RS10645 b529d1680c8055d2ebfbaa191ff6f678 144 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 142 7.8E-53 T 20-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APS56_RS06200 6a76606886750d96fd3e54b38bdbd6b5 434 PANTHER PTHR36932:SF1 73 417 3.7E-16 T 20-04-2016 APS56_RS06200 6a76606886750d96fd3e54b38bdbd6b5 434 PANTHER PTHR36932 73 417 3.7E-16 T 20-04-2016 APS56_RS06200 6a76606886750d96fd3e54b38bdbd6b5 434 SUPERFAMILY SSF56801 102 377 6.28E-12 T 20-04-2016 APS56_RS14380 8412600c2e1fbb9f0715cb9c466f4107 309 PANTHER PTHR30589 1 191 1.3E-44 T 20-04-2016 APS56_RS14380 8412600c2e1fbb9f0715cb9c466f4107 309 PANTHER PTHR30589 211 302 1.3E-44 T 20-04-2016 APS56_RS14380 8412600c2e1fbb9f0715cb9c466f4107 309 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 16 300 2.3E-61 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APS56_RS14380 8412600c2e1fbb9f0715cb9c466f4107 309 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 9 306 15.049 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APS56_RS14380 8412600c2e1fbb9f0715cb9c466f4107 309 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 16 306 3.2E-42 T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APS56_RS14380 8412600c2e1fbb9f0715cb9c466f4107 309 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 150 162 - T 20-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 PANTHER PTHR33706 397 501 1.3E-25 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 PANTHER PTHR33706 8 347 1.3E-25 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 SUPERFAMILY SSF82185 230 349 5.1E-19 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Pfam PF07661 MORN repeat variant 158 178 0.0011 T 20-04-2016 IPR011652 MORN variant APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Pfam PF07661 MORN repeat variant 425 445 1.4E-4 T 20-04-2016 IPR011652 MORN variant APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Pfam PF07661 MORN repeat variant 453 473 0.018 T 20-04-2016 IPR011652 MORN variant APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Pfam PF07661 MORN repeat variant 257 275 1.4 T 20-04-2016 IPR011652 MORN variant APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Pfam PF07661 MORN repeat variant 230 252 0.79 T 20-04-2016 IPR011652 MORN variant APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Pfam PF07661 MORN repeat variant 134 155 0.78 T 20-04-2016 IPR011652 MORN variant APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Pfam PF07661 MORN repeat variant 328 349 7.3E-4 T 20-04-2016 IPR011652 MORN variant APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Pfam PF07661 MORN repeat variant 401 421 2.2E-4 T 20-04-2016 IPR011652 MORN variant APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 SUPERFAMILY SSF82185 382 488 2.22E-13 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 SUPERFAMILY SSF82185 134 244 1.28E-14 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 PANTHER PTHR33706:SF1 397 501 1.3E-25 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 PANTHER PTHR33706:SF1 8 347 1.3E-25 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Gene3D G3DSA:2.20.110.10 379 498 1.2E-8 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Gene3D G3DSA:2.20.110.10 134 242 2.5E-7 T 20-04-2016 APS56_RS00305 b2dce7d9b4eac204891e9fc83020e623 506 Gene3D G3DSA:2.20.110.10 243 352 1.3E-11 T 20-04-2016 APS56_RS01305 0c5180140fdfbd6d16cee5b3ba58ab39 416 SUPERFAMILY SSF56935 47 391 5.86E-16 T 20-04-2016 APS56_RS01305 0c5180140fdfbd6d16cee5b3ba58ab39 416 Gene3D G3DSA:2.40.160.60 48 404 1.6E-24 T 20-04-2016 APS56_RS10825 828bce64afcbbe81533a7581340b1d26 285 SUPERFAMILY SSF53448 1 284 4.51E-84 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS10825 828bce64afcbbe81533a7581340b1d26 285 PANTHER PTHR22572 2 268 1.6E-154 T 20-04-2016 APS56_RS10825 828bce64afcbbe81533a7581340b1d26 285 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 284 2.0E-141 T 20-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APS56_RS10825 828bce64afcbbe81533a7581340b1d26 285 Gene3D G3DSA:3.90.550.10 1 261 4.2E-67 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS10825 828bce64afcbbe81533a7581340b1d26 285 PANTHER PTHR22572:SF105 2 268 1.6E-154 T 20-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APS56_RS10825 828bce64afcbbe81533a7581340b1d26 285 Pfam PF00483 Nucleotidyl transferase 2 236 5.8E-68 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 PRINTS PR00741 Glycosyl hydrolase family 29 signature 302 323 1.7E-16 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 PRINTS PR00741 Glycosyl hydrolase family 29 signature 117 133 1.7E-16 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 PRINTS PR00741 Glycosyl hydrolase family 29 signature 335 357 1.7E-16 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 PANTHER PTHR10030 33 393 6.8E-79 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 Gene3D G3DSA:3.20.20.80 37 352 5.4E-103 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 SMART SM00812 29 396 2.4E-128 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 Pfam PF01120 Alpha-L-fucosidase 34 349 1.4E-96 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 PIRSF PIRSF001092 1 453 1.7E-123 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS13370 78ef78e73555a2e1c36ee10fa0426381 455 SUPERFAMILY SSF51445 37 352 4.32E-98 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 SMART SM00710 385 411 8600.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 SMART SM00710 564 586 5600.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 SMART SM00710 153 202 3600.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 SMART SM00710 324 346 57.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 SMART SM00710 243 265 28.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 SMART SM00710 116 147 7700.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 699 772 1.1E-13 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 SUPERFAMILY SSF51126 323 446 1.45E-21 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09920 4e1dbfdce19fe21e98893370cdeb4961 772 SUPERFAMILY SSF51126 37 279 1.45E-21 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS11540 eebf1617181d66c3036202f5a1ea5f2f 249 SMART SM00028 20 53 9.9 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11540 eebf1617181d66c3036202f5a1ea5f2f 249 SMART SM00028 54 87 3.3E-6 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS11540 eebf1617181d66c3036202f5a1ea5f2f 249 SUPERFAMILY SSF48452 21 97 1.09E-15 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11540 eebf1617181d66c3036202f5a1ea5f2f 249 Gene3D G3DSA:1.25.40.10 22 100 3.3E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS11540 eebf1617181d66c3036202f5a1ea5f2f 249 SMART SM00287 187 249 3.1E-5 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APS56_RS11540 eebf1617181d66c3036202f5a1ea5f2f 249 Pfam PF08239 Bacterial SH3 domain 198 246 4.4E-9 T 20-04-2016 IPR003646 SH3-like domain, bacterial-type APS56_RS11540 eebf1617181d66c3036202f5a1ea5f2f 249 Pfam PF00515 Tetratricopeptide repeat 54 87 2.2E-7 T 20-04-2016 IPR001440 Tetratricopeptide repeat 1 GO:0005515 APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 SUPERFAMILY SSF49464 30 122 6.41E-11 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 SUPERFAMILY SSF56935 145 783 1.72E-76 T 20-04-2016 APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 PANTHER PTHR30069 29 612 1.0E-19 T 20-04-2016 APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 Gene3D G3DSA:2.60.40.1120 32 93 1.0E-8 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 Gene3D G3DSA:2.40.170.20 230 783 2.0E-43 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 Pfam PF07715 TonB-dependent Receptor Plug Domain 150 228 3.7E-9 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 Gene3D G3DSA:2.170.130.10 151 229 1.2E-11 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 Pfam PF14905 Outer membrane protein beta-barrel family 382 781 7.6E-97 T 20-04-2016 APS56_RS08710 06f8570a56eef4425ca2a6b89fd71100 798 Pfam PF13715 CarboxypepD_reg-like domain 33 123 6.6E-11 T 20-04-2016 APS56_RS03475 69b11b43ca3b9417920fb4a4133f92f7 332 PANTHER PTHR40031:SF1 2 323 1.2E-35 T 20-04-2016 APS56_RS03475 69b11b43ca3b9417920fb4a4133f92f7 332 PANTHER PTHR40031 2 323 1.2E-35 T 20-04-2016 APS56_RS03475 69b11b43ca3b9417920fb4a4133f92f7 332 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 173 5.0E-32 T 20-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase APS56_RS06360 029d4a7d66e1062091d5cd6e4aa1baab 212 Pfam PF16011 Carbohydrate-binding family 9 26 211 1.1E-58 T 20-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 APS56_RS06360 029d4a7d66e1062091d5cd6e4aa1baab 212 SUPERFAMILY SSF49344 33 211 2.2E-16 T 20-04-2016 APS56_RS06360 029d4a7d66e1062091d5cd6e4aa1baab 212 Gene3D G3DSA:2.60.40.1190 30 211 2.6E-15 T 20-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 PANTHER PTHR10657 337 594 5.7E-26 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 PANTHER PTHR10657 1 170 5.7E-26 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 SUPERFAMILY SSF54534 346 455 2.94E-21 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 Pfam PF13616 PPIC-type PPIASE domain 335 455 4.8E-35 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 Pfam PF13145 PPIC-type PPIASE domain 581 665 8.1E-7 T 20-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 Gene3D G3DSA:3.10.50.40 581 679 1.9E-6 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 Gene3D G3DSA:3.10.50.40 345 458 3.3E-28 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 Pfam PF13623 SurA N-terminal domain 4 138 5.3E-34 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 PANTHER PTHR10657:SF11 337 594 5.7E-26 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 PANTHER PTHR10657:SF11 1 170 5.7E-26 T 20-04-2016 APS56_RS08580 fde993176cc13a0496032139ef994b92 708 SUPERFAMILY SSF109998 207 245 2.28E-11 T 20-04-2016 IPR027304 Trigger factor/SurA domain APS56_RS08580 fde993176cc13a0496032139ef994b92 708 SUPERFAMILY SSF109998 43 168 2.28E-11 T 20-04-2016 IPR027304 Trigger factor/SurA domain APS56_RS09570 6c3fc6ace3c2536bee9f1fd7bdc27210 107 Pfam PF14114 Domain of unknown function (DUF4286) 3 97 2.6E-32 T 20-04-2016 IPR025563 Protein of unknown function DUF4286 APS56_RS14975 30200433d60f9f77979a63417c6970e2 132 SMART SM00450 30 127 3.9E-20 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS14975 30200433d60f9f77979a63417c6970e2 132 SUPERFAMILY SSF52821 8 129 1.83E-29 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS14975 30200433d60f9f77979a63417c6970e2 132 Gene3D G3DSA:3.40.250.10 12 130 1.1E-29 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS14975 30200433d60f9f77979a63417c6970e2 132 PANTHER PTHR12231 47 126 2.6E-13 T 20-04-2016 APS56_RS14975 30200433d60f9f77979a63417c6970e2 132 Pfam PF00581 Rhodanese-like domain 32 123 7.6E-16 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS02645 6d7245679e002bd0e9e2d6c866aaddaf 192 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 20-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APS56_RS02645 6d7245679e002bd0e9e2d6c866aaddaf 192 Gene3D G3DSA:2.160.10.10 8 189 1.0E-50 T 20-04-2016 APS56_RS02645 6d7245679e002bd0e9e2d6c866aaddaf 192 PANTHER PTHR23416 11 192 1.9E-51 T 20-04-2016 APS56_RS02645 6d7245679e002bd0e9e2d6c866aaddaf 192 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 77 110 9.4E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02645 6d7245679e002bd0e9e2d6c866aaddaf 192 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 130 165 2.7E-10 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS02645 6d7245679e002bd0e9e2d6c866aaddaf 192 PANTHER PTHR23416:SF58 11 192 1.9E-51 T 20-04-2016 APS56_RS02645 6d7245679e002bd0e9e2d6c866aaddaf 192 SUPERFAMILY SSF51161 54 187 3.88E-44 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS05775 a5d893cc409e5d1a65be948aa1b7f62f 309 SUPERFAMILY SSF52266 206 302 1.22E-6 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS05775 a5d893cc409e5d1a65be948aa1b7f62f 309 Gene3D G3DSA:3.40.50.1110 206 297 6.1E-6 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS10650 7df12029c0d3bd3205ef585dc4936fcd 475 PANTHER PTHR30250 1 475 8.6E-26 T 20-04-2016 APS56_RS10650 7df12029c0d3bd3205ef585dc4936fcd 475 PANTHER PTHR30250:SF8 1 475 8.6E-26 T 20-04-2016 APS56_RS10650 7df12029c0d3bd3205ef585dc4936fcd 475 Pfam PF01943 Polysaccharide biosynthesis protein 8 272 5.7E-13 T 20-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APS56_RS10650 7df12029c0d3bd3205ef585dc4936fcd 475 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 357 461 1.5E-8 T 20-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain APS56_RS15145 2a8d52800ca32ca1a80f71e0e5d81d9c 582 Pfam PF00474 Sodium:solute symporter family 33 424 3.7E-31 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS15145 2a8d52800ca32ca1a80f71e0e5d81d9c 582 PANTHER PTHR11819 1 440 6.5E-45 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS03780 356b8d07b25f669066b51ba8cf4d9f4b 367 Gene3D G3DSA:3.40.250.10 266 349 1.4E-14 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS03780 356b8d07b25f669066b51ba8cf4d9f4b 367 PANTHER PTHR10953 1 337 1.1E-92 T 20-04-2016 APS56_RS03780 356b8d07b25f669066b51ba8cf4d9f4b 367 Pfam PF00899 ThiF family 4 234 1.3E-65 T 20-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APS56_RS03780 356b8d07b25f669066b51ba8cf4d9f4b 367 PANTHER PTHR10953:SF153 1 337 1.1E-92 T 20-04-2016 APS56_RS03780 356b8d07b25f669066b51ba8cf4d9f4b 367 SUPERFAMILY SSF69572 2 328 3.14E-91 T 20-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APS56_RS03780 356b8d07b25f669066b51ba8cf4d9f4b 367 Gene3D G3DSA:3.40.50.720 2 236 4.5E-73 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 Pfam PF14905 Outer membrane protein beta-barrel family 437 894 2.0E-19 T 20-04-2016 APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 SUPERFAMILY SSF56935 462 525 2.33E-24 T 20-04-2016 APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 SUPERFAMILY SSF56935 589 792 2.33E-24 T 20-04-2016 APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 SUPERFAMILY SSF56935 830 896 2.33E-24 T 20-04-2016 APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 SUPERFAMILY SSF56935 109 414 2.33E-24 T 20-04-2016 APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 SUPERFAMILY SSF49464 23 116 7.59E-11 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 Gene3D G3DSA:2.170.130.10 132 205 1.4E-4 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 Pfam PF13715 CarboxypepD_reg-like domain 25 118 4.7E-13 T 20-04-2016 APS56_RS13455 da6993b7deb626ad94b4a96d951840df 916 Gene3D G3DSA:2.60.40.1120 24 98 7.0E-6 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS08415 4d00a26ac0e0f575cb4bfe14ef3f639b 139 SMART SM00116 89 136 1.3E-11 T 20-04-2016 IPR000644 CBS domain APS56_RS08415 4d00a26ac0e0f575cb4bfe14ef3f639b 139 SMART SM00116 14 61 6.2E-11 T 20-04-2016 IPR000644 CBS domain APS56_RS08415 4d00a26ac0e0f575cb4bfe14ef3f639b 139 SUPERFAMILY SSF54631 3 137 5.61E-31 T 20-04-2016 APS56_RS08415 4d00a26ac0e0f575cb4bfe14ef3f639b 139 Pfam PF00571 CBS domain 8 58 4.4E-12 T 20-04-2016 IPR000644 CBS domain APS56_RS08415 4d00a26ac0e0f575cb4bfe14ef3f639b 139 Pfam PF00571 CBS domain 83 136 1.4E-13 T 20-04-2016 IPR000644 CBS domain APS56_RS08415 4d00a26ac0e0f575cb4bfe14ef3f639b 139 PANTHER PTHR11911 1 135 2.9E-22 T 20-04-2016 APS56_RS08415 4d00a26ac0e0f575cb4bfe14ef3f639b 139 Gene3D G3DSA:3.10.580.10 7 137 2.5E-30 T 20-04-2016 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 PANTHER PTHR11808 265 424 3.3E-214 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 PANTHER PTHR11808 4 235 3.3E-214 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 Gene3D G3DSA:3.40.640.10 5 286 3.9E-110 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 Gene3D G3DSA:3.90.1150.10 288 424 9.9E-49 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 SUPERFAMILY SSF53383 5 421 4.26E-116 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 PIRSF PIRSF001434 1 424 2.0E-126 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 PANTHER PTHR11808:SF12 265 424 3.3E-214 T 20-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 PANTHER PTHR11808:SF12 4 235 3.3E-214 T 20-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 5 421 4.1E-188 T 20-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 APS56_RS07435 c7a901db9626877c13bdcc20e7abe1fb 424 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 421 5.6E-135 T 20-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 SMART SM00710 258 284 96.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 SMART SM00710 289 310 560.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 SMART SM00710 203 225 1400.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 SMART SM00710 235 257 0.92 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 SUPERFAMILY SSF51126 87 408 3.14E-30 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 237 269 7.9E-6 T 20-04-2016 IPR022441 Parallel beta-helix repeat-2 APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 Pfam PF13229 Right handed beta helix region 188 350 2.1E-18 T 20-04-2016 APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 Gene3D G3DSA:2.160.20.10 86 173 1.4E-19 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS01910 ad3428d9389803b84258b5e16fac914a 469 Gene3D G3DSA:2.160.20.10 217 445 1.4E-19 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS07825 44280cee7cb1f344399de22275c5a510 425 PANTHER PTHR12526 22 140 4.1E-61 T 20-04-2016 APS56_RS07825 44280cee7cb1f344399de22275c5a510 425 PANTHER PTHR12526 157 418 4.1E-61 T 20-04-2016 APS56_RS07825 44280cee7cb1f344399de22275c5a510 425 Gene3D G3DSA:3.40.50.2000 190 372 2.4E-30 T 20-04-2016 APS56_RS07825 44280cee7cb1f344399de22275c5a510 425 SUPERFAMILY SSF53756 22 416 7.46E-80 T 20-04-2016 APS56_RS07825 44280cee7cb1f344399de22275c5a510 425 Pfam PF13439 Glycosyltransferase Family 4 25 210 2.0E-22 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS07825 44280cee7cb1f344399de22275c5a510 425 Pfam PF00534 Glycosyl transferases group 1 220 384 1.3E-31 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 Gene3D G3DSA:3.30.1120.10 405 512 6.0E-10 T 20-04-2016 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 Pfam PF00884 Sulfatase 38 386 3.8E-69 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 PANTHER PTHR10342 1 450 7.4E-128 T 20-04-2016 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 PANTHER PTHR10342 477 513 7.4E-128 T 20-04-2016 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 PANTHER PTHR10342:SF199 477 513 7.4E-128 T 20-04-2016 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 SUPERFAMILY SSF53649 38 445 3.34E-113 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 SUPERFAMILY SSF53649 481 513 3.34E-113 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 PANTHER PTHR10342:SF199 1 450 7.4E-128 T 20-04-2016 APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 ProSitePatterns PS00149 Sulfatases signature 2. 132 142 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09755 0d1c09c9f1301055880d1ea5c514ad5d 514 Gene3D G3DSA:3.40.720.10 36 404 1.1E-101 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS04770 f297f375bf342d17773b83afbf7e779f 439 PANTHER PTHR40111 137 433 1.5E-34 T 20-04-2016 APS56_RS04770 f297f375bf342d17773b83afbf7e779f 439 PANTHER PTHR40111:SF1 137 433 1.5E-34 T 20-04-2016 APS56_RS04770 f297f375bf342d17773b83afbf7e779f 439 Gene3D G3DSA:3.40.50.1820 127 429 3.9E-50 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS04770 f297f375bf342d17773b83afbf7e779f 439 SUPERFAMILY SSF53474 146 430 1.11E-20 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS04770 f297f375bf342d17773b83afbf7e779f 439 Pfam PF05448 Acetyl xylan esterase (AXE1) 131 409 1.8E-42 T 20-04-2016 IPR008391 Acetyl xylan esterase APS56_RS01425 25a9c840bf93a722dac02091bab068bc 703 Gene3D G3DSA:3.30.420.10 470 703 1.0E-60 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS01425 25a9c840bf93a722dac02091bab068bc 703 SUPERFAMILY SSF53098 279 703 6.32E-39 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS01425 25a9c840bf93a722dac02091bab068bc 703 Gene3D G3DSA:3.40.50.2300 272 467 1.8E-31 T 20-04-2016 APS56_RS01425 25a9c840bf93a722dac02091bab068bc 703 Pfam PF02171 Piwi domain 408 686 1.5E-10 T 20-04-2016 IPR003165 Piwi domain GO:0003676 APS56_RS01425 25a9c840bf93a722dac02091bab068bc 703 SMART SM00950 399 690 6.1E-5 T 20-04-2016 IPR003165 Piwi domain GO:0003676 APS56_RS05320 17e2dfb1ad9a31c09c845221ed4222d6 297 Gene3D G3DSA:3.90.550.10 3 245 3.1E-18 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05320 17e2dfb1ad9a31c09c845221ed4222d6 297 SUPERFAMILY SSF53448 3 230 8.44E-22 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05320 17e2dfb1ad9a31c09c845221ed4222d6 297 Pfam PF00535 Glycosyl transferase family 2 4 148 9.2E-12 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS11245 9a0b952336ece412a3a123cb03542fe9 133 SUPERFAMILY SSF81330 10 128 1.96E-28 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS11245 9a0b952336ece412a3a123cb03542fe9 133 PANTHER PTHR30266 1 133 9.8E-41 T 20-04-2016 APS56_RS11245 9a0b952336ece412a3a123cb03542fe9 133 PANTHER PTHR30266:SF2 1 133 9.8E-41 T 20-04-2016 APS56_RS11245 9a0b952336ece412a3a123cb03542fe9 133 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 132 7.0E-34 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS11245 9a0b952336ece412a3a123cb03542fe9 133 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 132 8.1E-39 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS11245 9a0b952336ece412a3a123cb03542fe9 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 3.2E-12 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS11245 9a0b952336ece412a3a123cb03542fe9 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 86 94 3.2E-12 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS11245 9a0b952336ece412a3a123cb03542fe9 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 95 104 3.2E-12 T 20-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APS56_RS10960 2a8b150f43118fc89261c6b558aef2fc 303 PANTHER PTHR11562:SF17 3 299 4.1E-95 T 20-04-2016 APS56_RS10960 2a8b150f43118fc89261c6b558aef2fc 303 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 17 290 1.1E-78 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APS56_RS10960 2a8b150f43118fc89261c6b558aef2fc 303 SUPERFAMILY SSF161111 13 210 1.57E-53 T 20-04-2016 APS56_RS10960 2a8b150f43118fc89261c6b558aef2fc 303 Gene3D G3DSA:3.30.70.1350 219 290 8.1E-7 T 20-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APS56_RS10960 2a8b150f43118fc89261c6b558aef2fc 303 Pfam PF01545 Cation efflux family 19 210 7.8E-50 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APS56_RS10960 2a8b150f43118fc89261c6b558aef2fc 303 SUPERFAMILY SSF160240 214 291 2.62E-13 T 20-04-2016 APS56_RS10960 2a8b150f43118fc89261c6b558aef2fc 303 PANTHER PTHR11562 3 299 4.1E-95 T 20-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APS56_RS10960 2a8b150f43118fc89261c6b558aef2fc 303 Gene3D G3DSA:1.20.1510.10 17 210 2.1E-54 T 20-04-2016 IPR027469 Cation efflux protein transmembrane domain APS56_RS10160 9cb4ee9c66d5fe1f9de734ece119b252 393 Pfam PF12833 Helix-turn-helix domain 304 384 3.0E-11 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS10160 9cb4ee9c66d5fe1f9de734ece119b252 393 SMART SM00342 297 383 4.3E-8 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS10160 9cb4ee9c66d5fe1f9de734ece119b252 393 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 334 379 - T 20-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APS56_RS10160 9cb4ee9c66d5fe1f9de734ece119b252 393 SUPERFAMILY SSF46689 333 384 2.64E-6 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10160 9cb4ee9c66d5fe1f9de734ece119b252 393 Gene3D G3DSA:1.10.10.60 334 386 1.7E-9 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 PANTHER PTHR21666 146 483 6.1E-71 T 20-04-2016 APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 Pfam PF01476 LysM domain 472 515 6.7E-15 T 20-04-2016 IPR018392 LysM domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 Pfam PF01476 LysM domain 402 443 4.8E-13 T 20-04-2016 IPR018392 LysM domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 SUPERFAMILY SSF54106 469 515 1.19E-10 T 20-04-2016 IPR018392 LysM domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 SMART SM00257 401 444 7.6E-14 T 20-04-2016 IPR018392 LysM domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 SMART SM00257 471 515 5.1E-15 T 20-04-2016 IPR018392 LysM domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 Gene3D G3DSA:3.10.350.10 469 515 6.7E-19 T 20-04-2016 IPR018392 LysM domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 Gene3D G3DSA:3.10.350.10 400 445 4.6E-18 T 20-04-2016 IPR018392 LysM domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 Pfam PF01464 Transglycosylase SLT domain 161 262 2.9E-27 T 20-04-2016 IPR008258 Transglycosylase SLT domain 1 APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 PANTHER PTHR21666:SF178 146 483 6.1E-71 T 20-04-2016 APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 173 201 - T 20-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 SUPERFAMILY SSF53955 139 292 1.41E-37 T 20-04-2016 IPR023346 Lysozyme-like domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 SUPERFAMILY SSF54106 400 444 4.84E-11 T 20-04-2016 IPR018392 LysM domain APS56_RS10865 071b9b1b5857b666309897cdd4b53188 517 Gene3D G3DSA:1.10.530.10 151 303 6.6E-44 T 20-04-2016 APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 165 224 1.8E-8 T 20-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 31 103 1.1E-23 T 20-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 TIGRFAM TIGR00444 mazG: MazG family protein 18 255 1.8E-83 T 20-04-2016 IPR011551 NTP pyrophosphohydrolase MazG APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 SUPERFAMILY SSF101386 135 232 1.01E-24 T 20-04-2016 APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 Gene3D G3DSA:1.10.287.1080 8 75 4.7E-9 T 20-04-2016 APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 Gene3D G3DSA:1.10.287.1080 131 220 2.8E-14 T 20-04-2016 APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 PANTHER PTHR30522 1 256 1.8E-109 T 20-04-2016 APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 PANTHER PTHR30522:SF0 1 256 1.8E-109 T 20-04-2016 IPR011551 NTP pyrophosphohydrolase MazG APS56_RS04000 d884089a1e68654f57af9ade3bf6853b 257 SUPERFAMILY SSF101386 10 109 2.45E-22 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 Gene3D G3DSA:3.30.70.20 918 966 6.2E-15 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 Gene3D G3DSA:3.30.70.20 821 917 1.8E-36 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 Gene3D G3DSA:3.30.70.20 996 1077 1.8E-36 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 Gene3D G3DSA:3.40.50.740 385 491 1.6E-12 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 SUPERFAMILY SSF50692 633 728 7.46E-5 T 20-04-2016 IPR009010 Aspartate decarboxylase-like domain APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 TIGRFAM TIGR04519 MoCo_extend_TAT: MoCo/4Fe-4S cofactor protein extended Tat translocation domain 5 57 2.0E-17 T 20-04-2016 IPR030948 MoCo/4Fe-4S cofactor protein extended Tat translocation domain APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 SUPERFAMILY SSF53706 107 490 6.11E-17 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 PANTHER PTHR11938 1026 1064 4.3E-28 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 PANTHER PTHR11938 901 965 4.3E-28 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 PANTHER PTHR11938 820 855 4.3E-28 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 PANTHER PTHR11938 992 1010 4.3E-28 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 SUPERFAMILY SSF54862 822 873 1.26E-43 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 SUPERFAMILY SSF54862 903 965 1.26E-43 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 SUPERFAMILY SSF54862 995 1078 1.26E-43 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 PANTHER PTHR11938:SF86 1026 1064 4.3E-28 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 PANTHER PTHR11938:SF86 901 965 4.3E-28 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 PANTHER PTHR11938:SF86 820 855 4.3E-28 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 PANTHER PTHR11938:SF86 992 1010 4.3E-28 T 20-04-2016 APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 Pfam PF12838 4Fe-4S dicluster domain 945 1040 1.0E-7 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 Pfam PF12838 4Fe-4S dicluster domain 829 930 6.6E-11 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS12905 81683e3d2212f5d1bdd5736e2b43fa55 1087 Gene3D G3DSA:2.40.40.20 631 731 6.5E-8 T 20-04-2016 APS56_RS06000 fb7557016f006bee472acabecbcf90da 460 SUPERFAMILY SSF51126 36 323 5.91E-9 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS12120 f998076c0be859a64c6987d1aa9c2eee 291 PANTHER PTHR21621 1 288 2.3E-103 T 20-04-2016 APS56_RS12120 f998076c0be859a64c6987d1aa9c2eee 291 Pfam PF08443 RimK-like ATP-grasp domain 98 286 8.9E-63 T 20-04-2016 IPR013651 ATP-grasp fold, RimK-type APS56_RS12120 f998076c0be859a64c6987d1aa9c2eee 291 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 3 286 8.8E-79 T 20-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 APS56_RS12120 f998076c0be859a64c6987d1aa9c2eee 291 SUPERFAMILY SSF56059 98 288 5.4E-47 T 20-04-2016 APS56_RS12120 f998076c0be859a64c6987d1aa9c2eee 291 PANTHER PTHR21621:SF0 1 288 2.3E-103 T 20-04-2016 APS56_RS12120 f998076c0be859a64c6987d1aa9c2eee 291 Gene3D G3DSA:3.30.470.20 175 276 2.5E-33 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS12120 f998076c0be859a64c6987d1aa9c2eee 291 Gene3D G3DSA:3.30.1490.20 103 174 6.2E-9 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS12120 f998076c0be859a64c6987d1aa9c2eee 291 Gene3D G3DSA:3.40.50.20 5 102 2.9E-17 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 SUPERFAMILY SSF48179 364 460 2.89E-14 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 PANTHER PTHR23309:SF2 4 479 1.7E-110 T 20-04-2016 APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 206 1.2E-43 T 20-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 Gene3D G3DSA:3.90.226.10 504 635 3.9E-23 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 PANTHER PTHR23309 4 479 1.7E-110 T 20-04-2016 APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 SUPERFAMILY SSF52096 486 799 3.78E-40 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 Gene3D G3DSA:3.40.50.720 3 210 3.3E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 SUPERFAMILY SSF48179 207 318 4.0E-20 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 Gene3D G3DSA:1.10.1040.10 388 441 1.0E-8 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 Pfam PF00378 Enoyl-CoA hydratase/isomerase 498 630 2.4E-11 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 SUPERFAMILY SSF51735 4 207 6.94E-45 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 209 308 6.5E-13 T 20-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APS56_RS07795 7cae246e508c394e4f5b1f4b6b54e2c1 802 Gene3D G3DSA:1.10.1040.10 211 309 2.5E-17 T 20-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APS56_RS04435 895c4d0073ab251b64b18e0b2dece746 213 PANTHER PTHR30212:SF2 1 208 2.5E-49 T 20-04-2016 APS56_RS04435 895c4d0073ab251b64b18e0b2dece746 213 PANTHER PTHR30212 1 208 2.5E-49 T 20-04-2016 APS56_RS04435 895c4d0073ab251b64b18e0b2dece746 213 Pfam PF03473 MOSC domain 48 160 3.7E-17 T 20-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APS56_RS04435 895c4d0073ab251b64b18e0b2dece746 213 Gene3D G3DSA:2.40.33.20 1 210 4.0E-63 T 20-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like APS56_RS04435 895c4d0073ab251b64b18e0b2dece746 213 SUPERFAMILY SSF50800 2 211 8.89E-53 T 20-04-2016 IPR011037 Pyruvate kinase-like, insert domain APS56_RS14395 9caccf229de38ae422efe01f9ab792e4 339 SUPERFAMILY SSF64182 17 320 1.7E-62 T 20-04-2016 APS56_RS14395 9caccf229de38ae422efe01f9ab792e4 339 Pfam PF02272 DHHA1 domain 271 322 6.0E-7 T 20-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APS56_RS14395 9caccf229de38ae422efe01f9ab792e4 339 Pfam PF01368 DHH family 18 169 8.7E-21 T 20-04-2016 IPR001667 DDH domain APS56_RS14395 9caccf229de38ae422efe01f9ab792e4 339 Gene3D G3DSA:3.90.1640.10 17 208 3.4E-34 T 20-04-2016 APS56_RS04910 caf3c85fa84a974f9447bb93a406bc54 186 Pfam PF04143 Sulphur transport 116 174 1.4E-12 T 20-04-2016 IPR007272 Sulphur transport domain APS56_RS04910 caf3c85fa84a974f9447bb93a406bc54 186 PANTHER PTHR30574 107 186 1.4E-24 T 20-04-2016 APS56_RS04910 caf3c85fa84a974f9447bb93a406bc54 186 PANTHER PTHR30574 1 76 1.4E-24 T 20-04-2016 APS56_RS06920 974a4d01f63feb0a3dabe9c41941a26f 166 SUPERFAMILY SSF55961 12 161 7.7E-34 T 20-04-2016 APS56_RS06920 974a4d01f63feb0a3dabe9c41941a26f 166 Gene3D G3DSA:3.30.530.20 6 161 9.0E-39 T 20-04-2016 IPR023393 START-like domain APS56_RS06920 974a4d01f63feb0a3dabe9c41941a26f 166 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 24 161 6.4E-16 T 20-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 APS56_RS06920 974a4d01f63feb0a3dabe9c41941a26f 166 PANTHER PTHR36929 14 166 4.4E-23 T 20-04-2016 APS56_RS06920 974a4d01f63feb0a3dabe9c41941a26f 166 PANTHER PTHR36929:SF1 14 166 4.4E-23 T 20-04-2016 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 Pfam PF02938 GAD domain 311 400 1.2E-11 T 20-04-2016 IPR029351 GAD domain APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 SUPERFAMILY SSF50249 2 110 3.43E-30 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 SUPERFAMILY SSF55261 291 415 6.76E-30 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 Gene3D G3DSA:3.30.1360.30 279 409 1.4E-37 T 20-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 PANTHER PTHR22594:SF5 366 568 1.2E-231 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 PANTHER PTHR22594:SF5 1 299 1.2E-231 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 515 529 1.0E-25 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 1.0E-25 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 1.0E-25 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 PRINTS PR01042 Aspartyl-tRNA synthetase signature 471 487 1.0E-25 T 20-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 560 33.88 T 20-04-2016 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 583 4.6E-215 T 20-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 PANTHER PTHR22594 366 568 1.2E-231 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 PANTHER PTHR22594 1 299 1.2E-231 T 20-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 Gene3D G3DSA:3.30.930.10 137 278 1.6E-105 T 20-04-2016 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 Gene3D G3DSA:3.30.930.10 410 581 1.6E-105 T 20-04-2016 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 SUPERFAMILY SSF55681 421 580 2.39E-98 T 20-04-2016 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 SUPERFAMILY SSF55681 115 294 2.39E-98 T 20-04-2016 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 4.3E-11 T 20-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 554 3.0E-103 T 20-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APS56_RS09240 372b847dee4cdb653dbf24385e6256bc 584 Gene3D G3DSA:2.40.50.140 1 106 3.4E-34 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS03155 45dd3b102a59180469c379f5bbce728c 194 Pfam PF00293 NUDIX domain 45 166 1.1E-11 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APS56_RS03155 45dd3b102a59180469c379f5bbce728c 194 PANTHER PTHR11839 13 190 1.0E-46 T 20-04-2016 APS56_RS03155 45dd3b102a59180469c379f5bbce728c 194 Gene3D G3DSA:3.90.79.10 5 190 2.6E-56 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS03155 45dd3b102a59180469c379f5bbce728c 194 SUPERFAMILY SSF55811 13 191 2.98E-46 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS03155 45dd3b102a59180469c379f5bbce728c 194 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 9 188 6.4E-50 T 20-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 APS56_RS12805 3a52e6aab66a7d674eec36faf4c35350 120 SUPERFAMILY SSF142906 1 119 3.14E-41 T 20-04-2016 APS56_RS12805 3a52e6aab66a7d674eec36faf4c35350 120 Pfam PF04237 YjbR 11 105 1.1E-27 T 20-04-2016 IPR007351 Uncharacterised protein YjbR APS56_RS12805 3a52e6aab66a7d674eec36faf4c35350 120 PANTHER PTHR35145 1 120 2.1E-38 T 20-04-2016 APS56_RS06155 ae4429f43557ddaf7436154ec582e6fa 456 Pfam PF02469 Fasciclin domain 6 119 7.0E-16 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06155 ae4429f43557ddaf7436154ec582e6fa 456 SMART SM00554 30 122 1.2E-5 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06155 ae4429f43557ddaf7436154ec582e6fa 456 Gene3D G3DSA:2.30.180.10 1 119 1.2E-21 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06155 ae4429f43557ddaf7436154ec582e6fa 456 SUPERFAMILY SSF82153 1 120 1.03E-20 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06155 ae4429f43557ddaf7436154ec582e6fa 456 PANTHER PTHR10900 426 449 2.5E-12 T 20-04-2016 APS56_RS06155 ae4429f43557ddaf7436154ec582e6fa 456 PANTHER PTHR10900 1 122 2.5E-12 T 20-04-2016 APS56_RS04855 262d70988eec1076754c7050acd74a23 136 Gene3D G3DSA:3.90.110.10 37 94 3.7E-4 T 20-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APS56_RS16330 d459078b70ba1063808e3dc3a801bb0a 151 Gene3D G3DSA:2.60.40.10 37 103 1.4E-6 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS16330 d459078b70ba1063808e3dc3a801bb0a 151 Pfam PF03168 Late embryogenesis abundant protein 50 142 9.8E-7 T 20-04-2016 IPR004864 Late embryogenesis abundant protein, LEA-14 APS56_RS16330 d459078b70ba1063808e3dc3a801bb0a 151 SUPERFAMILY SSF117070 11 133 1.31E-5 T 20-04-2016 APS56_RS16445 c9db18d2ca92e6d2282d53edeb88285f 145 Gene3D G3DSA:3.40.30.10 26 114 4.2E-5 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS10695 19ae4d8a3e5814a1b48e1f8ef4b3087d 856 Pfam PF13181 Tetratricopeptide repeat 232 263 0.0019 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS10695 19ae4d8a3e5814a1b48e1f8ef4b3087d 856 SUPERFAMILY SSF48452 116 338 1.66E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10695 19ae4d8a3e5814a1b48e1f8ef4b3087d 856 Gene3D G3DSA:1.25.40.10 156 269 1.4E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10695 19ae4d8a3e5814a1b48e1f8ef4b3087d 856 Gene3D G3DSA:1.25.40.10 559 616 4.4E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS10695 19ae4d8a3e5814a1b48e1f8ef4b3087d 856 Gene3D G3DSA:1.25.40.10 301 352 4.4E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03425 2a736eb699bc1380c67d4a3c9d5161dd 210 PANTHER PTHR23026:SF101 1 210 4.2E-34 T 20-04-2016 APS56_RS03425 2a736eb699bc1380c67d4a3c9d5161dd 210 PANTHER PTHR23026 1 210 4.2E-34 T 20-04-2016 APS56_RS03425 2a736eb699bc1380c67d4a3c9d5161dd 210 SUPERFAMILY SSF55469 1 208 2.09E-52 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APS56_RS03425 2a736eb699bc1380c67d4a3c9d5161dd 210 Gene3D G3DSA:3.40.109.10 1 209 1.1E-55 T 20-04-2016 IPR000415 Nitroreductase-like GO:0016491 APS56_RS03425 2a736eb699bc1380c67d4a3c9d5161dd 210 Pfam PF00881 Nitroreductase family 9 184 1.7E-22 T 20-04-2016 IPR029479 Nitroreductase APS56_RS01210 45885c7ba88b4dd5e5f19f7db3809cc5 359 Pfam PF09561 HpaII restriction endonuclease 5 357 8.3E-136 T 20-04-2016 IPR019062 Restriction endonuclease, type II, HpaII APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 SUPERFAMILY SSF48600 267 357 2.14E-23 T 20-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 SUPERFAMILY SSF51569 17 262 6.14E-66 T 20-04-2016 APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 PANTHER PTHR21057 17 275 1.0E-79 T 20-04-2016 APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 SMART SM00830 277 357 4.9E-23 T 20-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 Gene3D G3DSA:3.20.20.70 17 261 4.8E-64 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 Gene3D G3DSA:1.20.59.10 263 355 3.1E-22 T 20-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 PANTHER PTHR21057:SF7 17 275 1.0E-79 T 20-04-2016 APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 Pfam PF01817 Chorismate mutase type II 277 355 3.8E-19 T 20-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APS56_RS07310 3eb4d1a16591a951bf38d79c2ffbfc8f 360 Pfam PF00793 DAHP synthetase I family 19 255 1.1E-35 T 20-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APS56_RS05370 3410f6615561b5c2751541eac83b164a 221 PANTHER PTHR23416:SF23 1 214 7.8E-28 T 20-04-2016 APS56_RS05370 3410f6615561b5c2751541eac83b164a 221 PANTHER PTHR23416 1 214 7.8E-28 T 20-04-2016 APS56_RS05370 3410f6615561b5c2751541eac83b164a 221 Gene3D G3DSA:2.160.10.10 95 217 4.6E-28 T 20-04-2016 APS56_RS05370 3410f6615561b5c2751541eac83b164a 221 SUPERFAMILY SSF51161 2 210 9.84E-34 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS05370 3410f6615561b5c2751541eac83b164a 221 Gene3D G3DSA:3.40.50.20 1 85 9.3E-9 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS05370 3410f6615561b5c2751541eac83b164a 221 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 4 208 2.7E-48 T 20-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 Gene3D G3DSA:3.40.50.720 3 253 2.8E-73 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.2E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.2E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.2E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.2E-35 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PANTHER PTHR24322 161 192 5.1E-50 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PANTHER PTHR24322 14 144 5.1E-50 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 SUPERFAMILY SSF51735 9 254 9.66E-72 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 1.7E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 1.7E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.7E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS15130 7f479c9690f245c3d6da0b07c3762c09 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 253 4.5E-60 T 20-04-2016 APS56_RS05350 7700ace22406e485e5f46587e34b8f97 309 Gene3D G3DSA:3.90.550.10 6 240 6.6E-47 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05350 7700ace22406e485e5f46587e34b8f97 309 PANTHER PTHR22916 6 239 8.8E-41 T 20-04-2016 APS56_RS05350 7700ace22406e485e5f46587e34b8f97 309 SUPERFAMILY SSF53448 6 221 6.19E-47 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05350 7700ace22406e485e5f46587e34b8f97 309 Pfam PF00535 Glycosyl transferase family 2 8 158 1.5E-34 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PRINTS PR00412 Epoxide hydrolase signature 139 152 8.8E-6 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PRINTS PR00412 Epoxide hydrolase signature 94 109 8.8E-6 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PRINTS PR00412 Epoxide hydrolase signature 308 330 8.8E-6 T 20-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 Gene3D G3DSA:3.40.50.1820 39 332 2.1E-69 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 Pfam PF00561 alpha/beta hydrolase fold 70 319 1.8E-23 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PANTHER PTHR10992 1 280 1.9E-67 T 20-04-2016 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PANTHER PTHR10992 296 333 1.9E-67 T 20-04-2016 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 109 4.7E-12 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 153 166 4.7E-12 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 261 275 4.7E-12 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 4.7E-12 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PANTHER PTHR10992:SF771 1 280 1.9E-67 T 20-04-2016 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 PANTHER PTHR10992:SF771 296 333 1.9E-67 T 20-04-2016 APS56_RS01135 4359faf6e0f9d0f66b3297fbac5861d1 333 SUPERFAMILY SSF53474 43 332 2.55E-61 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS07730 595820791e91f9abef411a57272b5434 420 SUPERFAMILY SSF56935 292 420 3.97E-13 T 20-04-2016 APS56_RS07730 595820791e91f9abef411a57272b5434 420 SUPERFAMILY SSF56935 48 263 3.97E-13 T 20-04-2016 APS56_RS07730 595820791e91f9abef411a57272b5434 420 Gene3D G3DSA:2.40.160.10 38 226 4.8E-6 T 20-04-2016 IPR023614 Porin domain APS56_RS03020 e44c73fd12f1824365a9838ddc7c796a 464 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 67 260 3.4E-36 T 20-04-2016 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain APS56_RS03020 e44c73fd12f1824365a9838ddc7c796a 464 Gene3D G3DSA:3.20.20.80 48 401 1.6E-97 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS03020 e44c73fd12f1824365a9838ddc7c796a 464 SUPERFAMILY SSF51445 67 402 3.4E-60 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS03020 e44c73fd12f1824365a9838ddc7c796a 464 PRINTS PR00843 Glycosyl hydrolase family 30 signature 57 77 9.1E-15 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS03020 e44c73fd12f1824365a9838ddc7c796a 464 PRINTS PR00843 Glycosyl hydrolase family 30 signature 194 211 9.1E-15 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS03020 e44c73fd12f1824365a9838ddc7c796a 464 PRINTS PR00843 Glycosyl hydrolase family 30 signature 92 118 9.1E-15 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS03020 e44c73fd12f1824365a9838ddc7c796a 464 PRINTS PR00843 Glycosyl hydrolase family 30 signature 120 148 9.1E-15 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS03020 e44c73fd12f1824365a9838ddc7c796a 464 PANTHER PTHR11069 53 456 1.3E-69 T 20-04-2016 IPR001139 Glycoside hydrolase family 30 GO:0004348|GO:0006665 APS56_RS07410 93fbd4b972b6e1a5a87272add693be43 206 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 44 184 3.3E-17 T 20-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APS56_RS07410 93fbd4b972b6e1a5a87272add693be43 206 PANTHER PTHR23293:SF5 1 184 2.6E-24 T 20-04-2016 APS56_RS07410 93fbd4b972b6e1a5a87272add693be43 206 PANTHER PTHR23293 1 184 2.6E-24 T 20-04-2016 APS56_RS07410 93fbd4b972b6e1a5a87272add693be43 206 SUPERFAMILY SSF52402 6 190 6.77E-35 T 20-04-2016 APS56_RS07410 93fbd4b972b6e1a5a87272add693be43 206 Gene3D G3DSA:3.40.50.620 4 185 6.7E-33 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS16560 2a07cdfe90ae0f12aa82d82b5883df7d 60 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 60 15.436 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS16560 2a07cdfe90ae0f12aa82d82b5883df7d 60 SUPERFAMILY SSF57829 3 60 2.44E-16 T 20-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APS56_RS16560 2a07cdfe90ae0f12aa82d82b5883df7d 60 PANTHER PTHR15238 1 60 1.7E-24 T 20-04-2016 APS56_RS16560 2a07cdfe90ae0f12aa82d82b5883df7d 60 PANTHER PTHR15238:SF3 1 60 1.7E-24 T 20-04-2016 APS56_RS16560 2a07cdfe90ae0f12aa82d82b5883df7d 60 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 60 1.2E-18 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS16560 2a07cdfe90ae0f12aa82d82b5883df7d 60 Pfam PF00471 Ribosomal protein L33 8 60 1.1E-20 T 20-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS04935 33056a75a9f9b72b033eae5022f2760d 276 PANTHER PTHR18895 36 272 3.0E-37 T 20-04-2016 APS56_RS04935 33056a75a9f9b72b033eae5022f2760d 276 SUPERFAMILY SSF53335 47 272 2.67E-36 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS04935 33056a75a9f9b72b033eae5022f2760d 276 PIRSF PIRSF000401 11 276 2.8E-44 T 20-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APS56_RS04935 33056a75a9f9b72b033eae5022f2760d 276 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 40 274 1.0E-44 T 20-04-2016 APS56_RS04935 33056a75a9f9b72b033eae5022f2760d 276 PANTHER PTHR18895:SF3 36 272 3.0E-37 T 20-04-2016 APS56_RS04935 33056a75a9f9b72b033eae5022f2760d 276 Gene3D G3DSA:3.40.50.150 84 271 2.4E-38 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS06460 2edc895205378f69532cf3e6b36680b6 233 PANTHER PTHR30335:SF1 1 190 2.9E-99 T 20-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APS56_RS06460 2edc895205378f69532cf3e6b36680b6 233 PANTHER PTHR30335 1 190 2.9E-99 T 20-04-2016 APS56_RS06460 2edc895205378f69532cf3e6b36680b6 233 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 1 187 4.5E-82 T 20-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APS56_RS06460 2edc895205378f69532cf3e6b36680b6 233 Pfam PF02508 Rnf-Nqr subunit, membrane protein 1 187 6.2E-54 T 20-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 Pfam PF00072 Response regulator receiver domain 4 115 1.7E-30 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 PANTHER PTHR32071 3 371 1.6E-170 T 20-04-2016 APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 SMART SM00382 161 304 7.7E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 20-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 SUPERFAMILY SSF52172 1 185 1.35E-45 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 SMART SM00448 2 115 6.8E-37 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 Gene3D G3DSA:3.40.50.2300 1 127 1.4E-40 T 20-04-2016 APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 Gene3D G3DSA:1.10.8.60 314 376 2.4E-22 T 20-04-2016 APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 Pfam PF00158 Sigma-54 interaction domain 141 307 8.8E-69 T 20-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 Gene3D G3DSA:3.40.50.300 139 312 7.1E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04305 d5d136e426f24bbccd2d20265d6dfbfb 387 SUPERFAMILY SSF52540 140 376 6.23E-69 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02670 8784790f810c161c27f9e438da105808 252 Gene3D G3DSA:3.40.50.150 32 200 1.6E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02670 8784790f810c161c27f9e438da105808 252 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 133 147 - T 20-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APS56_RS02670 8784790f810c161c27f9e438da105808 252 SUPERFAMILY SSF53335 14 195 6.97E-43 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS02670 8784790f810c161c27f9e438da105808 252 Pfam PF08241 Methyltransferase domain 47 143 4.4E-25 T 20-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APS56_RS02670 8784790f810c161c27f9e438da105808 252 PANTHER PTHR10108 27 195 1.2E-37 T 20-04-2016 APS56_RS10215 3cbd09a71341dab2edeab8764457ebc0 245 Gene3D G3DSA:3.40.50.300 4 237 1.1E-61 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10215 3cbd09a71341dab2edeab8764457ebc0 245 PANTHER PTHR24220 8 236 6.5E-125 T 20-04-2016 APS56_RS10215 3cbd09a71341dab2edeab8764457ebc0 245 SMART SM00382 31 216 7.3E-12 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS10215 3cbd09a71341dab2edeab8764457ebc0 245 SUPERFAMILY SSF52540 3 234 5.33E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10215 3cbd09a71341dab2edeab8764457ebc0 245 Pfam PF00005 ABC transporter 24 167 9.5E-30 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS10215 3cbd09a71341dab2edeab8764457ebc0 245 PANTHER PTHR24220:SF581 8 236 6.5E-125 T 20-04-2016 APS56_RS10215 3cbd09a71341dab2edeab8764457ebc0 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS05230 479dca333015a46da392e04e933d44f8 336 SUPERFAMILY SSF53756 11 335 4.08E-52 T 20-04-2016 APS56_RS05230 479dca333015a46da392e04e933d44f8 336 Pfam PF00534 Glycosyl transferases group 1 161 316 2.6E-25 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS05230 479dca333015a46da392e04e933d44f8 336 Gene3D G3DSA:3.40.50.2000 175 315 2.9E-16 T 20-04-2016 APS56_RS05230 479dca333015a46da392e04e933d44f8 336 PANTHER PTHR12526 23 335 5.1E-32 T 20-04-2016 APS56_RS02190 ccfa0571559ae189bf916ebd207ee1a3 383 PANTHER PTHR12526 177 316 5.6E-32 T 20-04-2016 APS56_RS02190 ccfa0571559ae189bf916ebd207ee1a3 383 Gene3D G3DSA:3.40.50.2000 178 318 1.6E-20 T 20-04-2016 APS56_RS02190 ccfa0571559ae189bf916ebd207ee1a3 383 Pfam PF00534 Glycosyl transferases group 1 203 317 4.5E-25 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS02190 ccfa0571559ae189bf916ebd207ee1a3 383 SUPERFAMILY SSF53756 9 378 7.46E-48 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 1021 7.2E-237 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 SUPERFAMILY SSF49464 23 103 9.68E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 208 238 6.1E-19 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 SUPERFAMILY SSF56935 451 792 3.89E-82 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 SUPERFAMILY SSF56935 860 904 3.89E-82 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 SUPERFAMILY SSF56935 937 1008 3.89E-82 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 SUPERFAMILY SSF56935 101 256 3.89E-82 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 SUPERFAMILY SSF56935 332 420 3.89E-82 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 Pfam PF07715 TonB-dependent Receptor Plug Domain 114 232 9.6E-18 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 Gene3D G3DSA:2.40.170.20 341 804 1.4E-47 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 Gene3D G3DSA:2.40.170.20 234 255 1.4E-47 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 Gene3D G3DSA:2.40.170.20 931 1019 1.4E-47 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 Gene3D G3DSA:2.40.170.20 869 894 1.4E-47 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 Gene3D G3DSA:2.170.130.10 108 233 3.7E-17 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 PANTHER PTHR11532 328 386 6.5E-216 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 PANTHER PTHR11532 1 297 6.5E-216 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 PANTHER PTHR11532 483 1020 6.5E-216 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 PANTHER PTHR11532:SF57 328 386 6.5E-216 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 PANTHER PTHR11532:SF57 1 297 6.5E-216 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 PANTHER PTHR11532:SF57 483 1020 6.5E-216 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 Pfam PF13715 CarboxypepD_reg-like domain 25 105 2.5E-17 T 20-04-2016 APS56_RS10085 14e0dc8df8a6efe7132948969f718f12 1022 Gene3D G3DSA:2.60.40.1120 25 107 1.9E-10 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS10600 99f3403f4c83d79ee0e985b706e85862 367 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 281 2.9E-61 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APS56_RS10600 99f3403f4c83d79ee0e985b706e85862 367 SUPERFAMILY SSF102405 84 276 5.04E-24 T 20-04-2016 APS56_RS10600 99f3403f4c83d79ee0e985b706e85862 367 Gene3D G3DSA:1.10.150.20 15 69 5.4E-7 T 20-04-2016 APS56_RS10600 99f3403f4c83d79ee0e985b706e85862 367 SUPERFAMILY SSF47781 3 60 8.9E-10 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APS56_RS10600 99f3403f4c83d79ee0e985b706e85862 367 Pfam PF02481 DNA recombination-mediator protein A 74 280 6.2E-68 T 20-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APS56_RS10600 99f3403f4c83d79ee0e985b706e85862 367 PANTHER PTHR32039:SF8 7 366 1.4E-79 T 20-04-2016 APS56_RS10600 99f3403f4c83d79ee0e985b706e85862 367 PANTHER PTHR32039 7 366 1.4E-79 T 20-04-2016 APS56_RS10600 99f3403f4c83d79ee0e985b706e85862 367 Gene3D G3DSA:3.40.50.450 115 239 1.2E-5 T 20-04-2016 APS56_RS09540 0f99d2747289754fff2c2f1a7a90595c 334 PIRSF PIRSF006268 4 332 1.6E-65 T 20-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APS56_RS09540 0f99d2747289754fff2c2f1a7a90595c 334 Pfam PF02424 ApbE family 57 302 3.9E-56 T 20-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APS56_RS09540 0f99d2747289754fff2c2f1a7a90595c 334 PANTHER PTHR30040:SF2 35 334 2.0E-61 T 20-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APS56_RS09540 0f99d2747289754fff2c2f1a7a90595c 334 SUPERFAMILY SSF143631 32 316 2.88E-62 T 20-04-2016 IPR003374 ApbE-like domain APS56_RS09540 0f99d2747289754fff2c2f1a7a90595c 334 PANTHER PTHR30040 35 334 2.0E-61 T 20-04-2016 APS56_RS12565 c4de76f2ac9b9f29bebb9cc5b794e7bc 99 SUPERFAMILY SSF47473 28 96 7.12E-7 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS12565 c4de76f2ac9b9f29bebb9cc5b794e7bc 99 Gene3D G3DSA:1.10.238.10 32 94 6.0E-5 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS15190 54f418cf5518b9e578316ebc5f2a3ca0 180 SUPERFAMILY SSF88659 118 177 3.92E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15190 54f418cf5518b9e578316ebc5f2a3ca0 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 176 3.0E-26 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15190 54f418cf5518b9e578316ebc5f2a3ca0 180 Pfam PF04542 Sigma-70 region 2 24 91 9.2E-13 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15190 54f418cf5518b9e578316ebc5f2a3ca0 180 Gene3D G3DSA:1.10.1740.10 3 100 1.5E-27 T 20-04-2016 APS56_RS15190 54f418cf5518b9e578316ebc5f2a3ca0 180 Gene3D G3DSA:1.10.10.10 115 177 1.6E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS15190 54f418cf5518b9e578316ebc5f2a3ca0 180 PANTHER PTHR30173 21 177 3.8E-33 T 20-04-2016 APS56_RS15190 54f418cf5518b9e578316ebc5f2a3ca0 180 SUPERFAMILY SSF88946 3 100 3.66E-22 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15190 54f418cf5518b9e578316ebc5f2a3ca0 180 Pfam PF08281 Sigma-70, region 4 122 173 6.1E-12 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15795 fa0743db2b7a6c15ce97117cb0e569af 221 SMART SM00448 3 129 0.0083 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15795 fa0743db2b7a6c15ce97117cb0e569af 221 SUPERFAMILY SSF52172 4 145 3.7E-10 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS15795 fa0743db2b7a6c15ce97117cb0e569af 221 Pfam PF00072 Response regulator receiver domain 5 128 2.8E-9 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15795 fa0743db2b7a6c15ce97117cb0e569af 221 Gene3D G3DSA:3.40.50.2300 4 146 1.4E-14 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 195 225 1.2E-15 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 PANTHER PTHR11532 421 459 4.3E-256 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 PANTHER PTHR11532 495 524 4.3E-256 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 PANTHER PTHR11532 552 1021 4.3E-256 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 PANTHER PTHR11532 2 358 4.3E-256 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Pfam PF13715 CarboxypepD_reg-like domain 24 104 2.0E-16 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 23 1023 6.4E-263 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Gene3D G3DSA:2.40.170.20 269 270 2.9E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Gene3D G3DSA:2.40.170.20 307 777 2.9E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Gene3D G3DSA:2.40.170.20 862 911 2.9E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Gene3D G3DSA:2.40.170.20 943 1005 2.9E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Gene3D G3DSA:2.40.170.20 222 232 2.9E-52 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 SUPERFAMILY SSF49464 23 103 3.79E-17 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 219 4.9E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Gene3D G3DSA:2.60.40.1120 23 113 6.6E-13 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 PANTHER PTHR11532:SF57 421 459 4.3E-256 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 PANTHER PTHR11532:SF57 495 524 4.3E-256 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 PANTHER PTHR11532:SF57 552 1021 4.3E-256 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 PANTHER PTHR11532:SF57 2 358 4.3E-256 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Pfam PF00593 TonB dependent receptor 596 997 5.5E-20 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 SUPERFAMILY SSF56935 102 243 5.49E-90 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 SUPERFAMILY SSF56935 936 1003 5.49E-90 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 SUPERFAMILY SSF56935 417 763 5.49E-90 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 SUPERFAMILY SSF56935 853 897 5.49E-90 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 SUPERFAMILY SSF56935 298 387 5.49E-90 T 20-04-2016 APS56_RS04805 914cc95c11c963103d1f2ce572e80a3a 1023 Gene3D G3DSA:2.170.130.10 114 221 8.9E-21 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS09630 dd63e3190f4f3b02b3447dcedd6817f6 454 PANTHER PTHR22953:SF0 23 446 4.0E-42 T 20-04-2016 APS56_RS09630 dd63e3190f4f3b02b3447dcedd6817f6 454 SUPERFAMILY SSF56300 138 403 1.61E-44 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS09630 dd63e3190f4f3b02b3447dcedd6817f6 454 Gene3D G3DSA:3.60.21.10 135 404 8.4E-50 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS09630 dd63e3190f4f3b02b3447dcedd6817f6 454 Gene3D G3DSA:2.60.40.380 35 133 1.2E-13 T 20-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 APS56_RS09630 dd63e3190f4f3b02b3447dcedd6817f6 454 SUPERFAMILY SSF49363 34 132 1.01E-12 T 20-04-2016 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 APS56_RS09630 dd63e3190f4f3b02b3447dcedd6817f6 454 Pfam PF16656 Purple acid Phosphatase, N-terminal domain 35 131 3.3E-16 T 20-04-2016 IPR015914 Purple acid phosphatase, N-terminal GO:0003993|GO:0046872 APS56_RS09630 dd63e3190f4f3b02b3447dcedd6817f6 454 PANTHER PTHR22953 23 446 4.0E-42 T 20-04-2016 APS56_RS09630 dd63e3190f4f3b02b3447dcedd6817f6 454 Pfam PF00149 Calcineurin-like phosphoesterase 139 333 4.5E-20 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS07850 bc4f8959e4b0de32e5ceed288614a865 279 SUPERFAMILY SSF52402 1 158 7.2E-20 T 20-04-2016 APS56_RS07850 bc4f8959e4b0de32e5ceed288614a865 279 Gene3D G3DSA:3.40.50.620 3 148 2.2E-16 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS07850 bc4f8959e4b0de32e5ceed288614a865 279 PRINTS PR01438 Universal stress protein signature 1 19 2.6E-5 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS07850 bc4f8959e4b0de32e5ceed288614a865 279 PRINTS PR01438 Universal stress protein signature 107 119 2.6E-5 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS07850 bc4f8959e4b0de32e5ceed288614a865 279 PRINTS PR01438 Universal stress protein signature 125 147 2.6E-5 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS07850 bc4f8959e4b0de32e5ceed288614a865 279 Pfam PF00582 Universal stress protein family 2 147 6.7E-10 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.214 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.3E-19 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.3E-19 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.3E-19 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 20-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 SUPERFAMILY SSF143034 2 62 4.19E-22 T 20-04-2016 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 PANTHER PTHR33343 1 62 4.2E-25 T 20-04-2016 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 5.7E-27 T 20-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APS56_RS16630 7ea74d6c821cdbae386ca5cfc45b5663 65 Pfam PF01632 Ribosomal protein L35 2 62 7.5E-26 T 20-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS02060 fde620186f26bbcdd9c8dad3c6737f87 796 Gene3D G3DSA:2.40.170.20 196 769 1.5E-29 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS02060 fde620186f26bbcdd9c8dad3c6737f87 796 Pfam PF13715 CarboxypepD_reg-like domain 10 90 2.1E-13 T 20-04-2016 APS56_RS02060 fde620186f26bbcdd9c8dad3c6737f87 796 SUPERFAMILY SSF49464 9 80 9.61E-13 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS02060 fde620186f26bbcdd9c8dad3c6737f87 796 SUPERFAMILY SSF56935 123 769 2.23E-44 T 20-04-2016 APS56_RS02060 fde620186f26bbcdd9c8dad3c6737f87 796 Gene3D G3DSA:2.60.40.1120 9 79 1.1E-10 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS02060 fde620186f26bbcdd9c8dad3c6737f87 796 Pfam PF14905 Outer membrane protein beta-barrel family 359 767 1.9E-89 T 20-04-2016 APS56_RS15880 e7b2071bd5a9b0936439c0aea9420617 281 Gene3D G3DSA:1.25.40.10 194 257 6.1E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15880 e7b2071bd5a9b0936439c0aea9420617 281 SUPERFAMILY SSF48452 192 264 6.45E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15880 e7b2071bd5a9b0936439c0aea9420617 281 Pfam PF11138 Protein of unknown function (DUF2911) 27 172 1.2E-50 T 20-04-2016 IPR021314 Protein of unknown function DUF2911 APS56_RS03225 22d831bb18bf69d8fc0db05fe483a407 117 Pfam PF13102 Phage integrase SAM-like domain 11 104 1.5E-15 T 20-04-2016 IPR025269 Phage integrase SAM-like domain APS56_RS05905 aa0dccc69e3903e0ef9bc1113257ff49 553 Pfam PF08666 SAF domain 14 84 6.0E-7 T 20-04-2016 IPR013974 SAF domain APS56_RS05905 aa0dccc69e3903e0ef9bc1113257ff49 553 SMART SM00858 14 85 9.1E-7 T 20-04-2016 IPR013974 SAF domain APS56_RS05905 aa0dccc69e3903e0ef9bc1113257ff49 553 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 113 551 7.9E-154 T 20-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 APS56_RS05905 aa0dccc69e3903e0ef9bc1113257ff49 553 PANTHER PTHR30536 5 155 1.1E-137 T 20-04-2016 APS56_RS05905 aa0dccc69e3903e0ef9bc1113257ff49 553 PANTHER PTHR30536 184 553 1.1E-137 T 20-04-2016 APS56_RS05905 aa0dccc69e3903e0ef9bc1113257ff49 553 PANTHER PTHR30536:SF5 5 155 1.1E-137 T 20-04-2016 APS56_RS05905 aa0dccc69e3903e0ef9bc1113257ff49 553 PANTHER PTHR30536:SF5 184 553 1.1E-137 T 20-04-2016 APS56_RS13610 a85335e25d25a8c9ef8c86675020fc47 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 19 282 1.8E-16 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS13610 a85335e25d25a8c9ef8c86675020fc47 303 PIRSF PIRSF006278 2 299 1.4E-72 T 20-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase APS56_RS13610 a85335e25d25a8c9ef8c86675020fc47 303 SUPERFAMILY SSF53686 17 293 9.6E-56 T 20-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APS56_RS13610 a85335e25d25a8c9ef8c86675020fc47 303 PANTHER PTHR10314 16 290 4.7E-41 T 20-04-2016 APS56_RS13610 a85335e25d25a8c9ef8c86675020fc47 303 PANTHER PTHR10314:SF79 16 290 4.7E-41 T 20-04-2016 APS56_RS13610 a85335e25d25a8c9ef8c86675020fc47 303 Gene3D G3DSA:3.40.50.1100 102 296 1.7E-55 T 20-04-2016 APS56_RS09600 591575bb6557d5635c6432706ac862af 912 Pfam PF13688 Metallo-peptidase family M12 208 402 1.0E-28 T 20-04-2016 APS56_RS09600 591575bb6557d5635c6432706ac862af 912 SUPERFAMILY SSF55486 241 434 2.75E-23 T 20-04-2016 APS56_RS09600 591575bb6557d5635c6432706ac862af 912 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 836 911 2.7E-14 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS09600 591575bb6557d5635c6432706ac862af 912 SUPERFAMILY SSF49785 690 817 5.95E-11 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS09600 591575bb6557d5635c6432706ac862af 912 Pfam PF01483 Proprotein convertase P-domain 710 815 4.1E-11 T 20-04-2016 IPR002884 Proprotein convertase, P GO:0004252|GO:0006508 APS56_RS09600 591575bb6557d5635c6432706ac862af 912 Gene3D G3DSA:2.60.120.260 698 818 1.4E-8 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS09600 591575bb6557d5635c6432706ac862af 912 Gene3D G3DSA:2.60.120.380 840 900 6.0E-4 T 20-04-2016 APS56_RS09600 591575bb6557d5635c6432706ac862af 912 Gene3D G3DSA:3.40.390.10 239 434 2.8E-14 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS10185 d8591cdd31a52e03c44c8f345e9aaba4 75 PANTHER PTHR33238 4 72 4.8E-12 T 20-04-2016 APS56_RS10185 d8591cdd31a52e03c44c8f345e9aaba4 75 SUPERFAMILY SSF50037 5 73 5.04E-16 T 20-04-2016 IPR008988 Transcriptional repressor, C-terminal APS56_RS10185 d8591cdd31a52e03c44c8f345e9aaba4 75 SMART SM00899 3 74 8.8E-11 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APS56_RS10185 d8591cdd31a52e03c44c8f345e9aaba4 75 Pfam PF04023 FeoA domain 4 73 4.5E-14 T 20-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APS56_RS06575 97351069f001868b59b271b27598cf71 184 Pfam PF08281 Sigma-70, region 4 123 174 1.4E-8 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06575 97351069f001868b59b271b27598cf71 184 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 178 2.3E-24 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06575 97351069f001868b59b271b27598cf71 184 Gene3D G3DSA:1.10.1740.10 10 98 5.8E-17 T 20-04-2016 APS56_RS06575 97351069f001868b59b271b27598cf71 184 Pfam PF04542 Sigma-70 region 2 14 77 8.3E-12 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06575 97351069f001868b59b271b27598cf71 184 SUPERFAMILY SSF88659 94 182 4.91E-11 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06575 97351069f001868b59b271b27598cf71 184 SUPERFAMILY SSF88946 9 79 2.2E-15 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06575 97351069f001868b59b271b27598cf71 184 PANTHER PTHR30173 9 183 3.1E-29 T 20-04-2016 APS56_RS06575 97351069f001868b59b271b27598cf71 184 Gene3D G3DSA:1.10.10.10 117 181 1.5E-9 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS05420 b5b2af6ba8ce447a9b91aa889aed4be1 257 Gene3D G3DSA:3.40.50.150 88 249 3.4E-23 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS05420 b5b2af6ba8ce447a9b91aa889aed4be1 257 SUPERFAMILY SSF53335 91 249 5.94E-21 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS05420 b5b2af6ba8ce447a9b91aa889aed4be1 257 Pfam PF13578 Methyltransferase domain 109 211 2.8E-14 T 20-04-2016 APS56_RS03280 1e6973047a27cbd54780388711f3c90f 272 Gene3D G3DSA:3.30.2010.10 86 150 1.2E-11 T 20-04-2016 APS56_RS03280 1e6973047a27cbd54780388711f3c90f 272 Pfam PF01435 Peptidase family M48 91 253 6.9E-33 T 20-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APS56_RS03280 1e6973047a27cbd54780388711f3c90f 272 PANTHER PTHR22726 2 264 7.1E-62 T 20-04-2016 APS56_RS00465 393e2f28da6b698a5d030457f186cedc 569 Pfam PF09822 ABC-type uncharacterized transport system 43 326 1.5E-71 T 20-04-2016 IPR019196 ABC-type uncharacterised transport system APS56_RS00465 393e2f28da6b698a5d030457f186cedc 569 TIGRFAM TIGR03521 GldG: gliding-associated putative ABC transporter substrate-binding component GldG 21 568 5.4E-224 T 20-04-2016 IPR019863 Gliding-associated putative ABC transporter substrate-binding GldG APS56_RS06775 c57b7003f16cf7f73b7e4df7811e91f3 322 PANTHER PTHR24220 6 223 6.2E-120 T 20-04-2016 APS56_RS06775 c57b7003f16cf7f73b7e4df7811e91f3 322 SUPERFAMILY SSF52540 3 223 8.2E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06775 c57b7003f16cf7f73b7e4df7811e91f3 322 Pfam PF00005 ABC transporter 21 163 1.7E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS06775 c57b7003f16cf7f73b7e4df7811e91f3 322 SMART SM00382 29 227 2.9E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS06775 c57b7003f16cf7f73b7e4df7811e91f3 322 PANTHER PTHR24220:SF480 6 223 6.2E-120 T 20-04-2016 APS56_RS06775 c57b7003f16cf7f73b7e4df7811e91f3 322 Gene3D G3DSA:3.40.50.300 2 225 4.3E-66 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06040 3bf05106e74fdeee38768d1573edc8f5 914 SUPERFAMILY SSF48230 160 414 2.2E-18 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS07750 6927ddce0a354886237da32e2679f17f 187 SUPERFAMILY SSF69118 1 182 2.56E-45 T 20-04-2016 IPR029032 AhpD-like APS56_RS07750 6927ddce0a354886237da32e2679f17f 187 PANTHER PTHR35446 1 186 9.1E-61 T 20-04-2016 APS56_RS07750 6927ddce0a354886237da32e2679f17f 187 Gene3D G3DSA:1.20.1290.10 138 179 9.1E-23 T 20-04-2016 IPR029032 AhpD-like APS56_RS07750 6927ddce0a354886237da32e2679f17f 187 Gene3D G3DSA:1.20.1290.10 1 88 9.1E-23 T 20-04-2016 IPR029032 AhpD-like APS56_RS07750 6927ddce0a354886237da32e2679f17f 187 PANTHER PTHR35446:SF1 1 186 9.1E-61 T 20-04-2016 APS56_RS09875 d8dc9fa0dc03c3d853f02cdd527fe60c 258 PANTHER PTHR31988:SF1 30 255 5.5E-45 T 20-04-2016 APS56_RS09875 d8dc9fa0dc03c3d853f02cdd527fe60c 258 PANTHER PTHR31988 30 255 5.5E-45 T 20-04-2016 APS56_RS09875 d8dc9fa0dc03c3d853f02cdd527fe60c 258 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 132 208 1.6E-10 T 20-04-2016 IPR005181 Sialate O-acetylesterase domain APS56_RS09875 d8dc9fa0dc03c3d853f02cdd527fe60c 258 SUPERFAMILY SSF52266 32 255 2.47E-58 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS13910 3259a88104fff139a5822ef61f56da68 471 Gene3D G3DSA:1.25.40.10 227 278 2.8E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13910 3259a88104fff139a5822ef61f56da68 471 Gene3D G3DSA:1.25.40.10 325 412 2.8E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13910 3259a88104fff139a5822ef61f56da68 471 Pfam PF07980 SusD family 194 414 2.3E-6 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS13910 3259a88104fff139a5822ef61f56da68 471 SUPERFAMILY SSF48452 5 429 4.05E-19 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04220 1ad8aced57a7c1394a1cf326a43c89f7 337 Pfam PF02628 Cytochrome oxidase assembly protein 10 328 6.3E-106 T 20-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 APS56_RS04220 1ad8aced57a7c1394a1cf326a43c89f7 337 PANTHER PTHR23289:SF2 2 337 5.7E-128 T 20-04-2016 APS56_RS04220 1ad8aced57a7c1394a1cf326a43c89f7 337 PANTHER PTHR23289 2 337 5.7E-128 T 20-04-2016 APS56_RS04220 1ad8aced57a7c1394a1cf326a43c89f7 337 Hamap MF_01665 Heme A synthase [ctaA]. 5 337 23.695 T 20-04-2016 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 APS56_RS05690 0a5540133f5b7689b0b76f35a1731843 67 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 2 66 2.2E-11 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS01610 3e1245f065070294209704aee3abf4ea 231 Gene3D G3DSA:3.40.50.300 4 224 4.3E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01610 3e1245f065070294209704aee3abf4ea 231 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 221 1.3E-70 T 20-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APS56_RS01610 3e1245f065070294209704aee3abf4ea 231 Pfam PF02224 Cytidylate kinase 7 224 1.3E-69 T 20-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APS56_RS01610 3e1245f065070294209704aee3abf4ea 231 PANTHER PTHR21299 7 231 2.0E-60 T 20-04-2016 APS56_RS01610 3e1245f065070294209704aee3abf4ea 231 SUPERFAMILY SSF52540 5 227 1.02E-45 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01610 3e1245f065070294209704aee3abf4ea 231 Hamap MF_00238 Cytidylate kinase [cmk]. 5 228 33.235 T 20-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APS56_RS08735 654c6362c151e479db320647af25f6df 124 SUPERFAMILY SSF159888 6 110 7.59E-11 T 20-04-2016 APS56_RS08735 654c6362c151e479db320647af25f6df 124 Pfam PF08818 Domain of unknown function (DU1801) 16 109 7.0E-8 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 APS56_RS09185 60412108fc863cf2a3bcddaf0d5dc6c3 235 SUPERFAMILY SSF52540 2 219 2.33E-55 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS09185 60412108fc863cf2a3bcddaf0d5dc6c3 235 SMART SM00382 26 211 1.8E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS09185 60412108fc863cf2a3bcddaf0d5dc6c3 235 Gene3D G3DSA:3.40.50.300 1 220 1.5E-57 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS09185 60412108fc863cf2a3bcddaf0d5dc6c3 235 Pfam PF00005 ABC transporter 17 154 2.0E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS09185 60412108fc863cf2a3bcddaf0d5dc6c3 235 PANTHER PTHR24220 3 229 6.2E-69 T 20-04-2016 APS56_RS09185 60412108fc863cf2a3bcddaf0d5dc6c3 235 PANTHER PTHR24220:SF160 3 229 6.2E-69 T 20-04-2016 APS56_RS06380 aa28d3ef90ba92e571715f0e6feeb773 259 PANTHER PTHR22726 1 250 9.3E-69 T 20-04-2016 APS56_RS06380 aa28d3ef90ba92e571715f0e6feeb773 259 Gene3D G3DSA:3.30.2010.10 72 152 2.8E-14 T 20-04-2016 APS56_RS06380 aa28d3ef90ba92e571715f0e6feeb773 259 Pfam PF01435 Peptidase family M48 99 247 1.8E-24 T 20-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APS56_RS06380 aa28d3ef90ba92e571715f0e6feeb773 259 PANTHER PTHR22726:SF9 1 250 9.3E-69 T 20-04-2016 APS56_RS04595 e95dd2b80fcf3c028785791eed61ec7e 459 ProSitePatterns PS00523 Sulfatases signature 1. 84 96 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS04595 e95dd2b80fcf3c028785791eed61ec7e 459 Gene3D G3DSA:3.40.720.10 36 362 6.9E-119 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS04595 e95dd2b80fcf3c028785791eed61ec7e 459 Pfam PF00884 Sulfatase 39 347 6.7E-81 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS04595 e95dd2b80fcf3c028785791eed61ec7e 459 SUPERFAMILY SSF53649 36 448 5.23E-132 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS04595 e95dd2b80fcf3c028785791eed61ec7e 459 Gene3D G3DSA:3.30.1120.10 363 449 5.3E-15 T 20-04-2016 APS56_RS04595 e95dd2b80fcf3c028785791eed61ec7e 459 ProSitePatterns PS00149 Sulfatases signature 2. 132 142 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS04595 e95dd2b80fcf3c028785791eed61ec7e 459 PANTHER PTHR10342 6 450 4.3E-156 T 20-04-2016 APS56_RS04595 e95dd2b80fcf3c028785791eed61ec7e 459 PANTHER PTHR10342:SF199 6 450 4.3E-156 T 20-04-2016 APS56_RS05210 b7176e0d17cfe3b9c16559279c88f28b 245 Pfam PF01066 CDP-alcohol phosphatidyltransferase 5 68 2.5E-15 T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APS56_RS05210 b7176e0d17cfe3b9c16559279c88f28b 245 PANTHER PTHR15362 5 85 4.4E-21 T 20-04-2016 APS56_RS05210 b7176e0d17cfe3b9c16559279c88f28b 245 PANTHER PTHR15362 106 245 4.4E-21 T 20-04-2016 APS56_RS05210 b7176e0d17cfe3b9c16559279c88f28b 245 PANTHER PTHR15362:SF5 5 85 4.4E-21 T 20-04-2016 APS56_RS05210 b7176e0d17cfe3b9c16559279c88f28b 245 PANTHER PTHR15362:SF5 106 245 4.4E-21 T 20-04-2016 APS56_RS05210 b7176e0d17cfe3b9c16559279c88f28b 245 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 46 68 - T 20-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APS56_RS03685 b7665a6bbf13dad613139dcd045b37e9 1108 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1106 0.0 T 20-04-2016 IPR018667 Domain of unknown function DUF2126 APS56_RS03685 b7665a6bbf13dad613139dcd045b37e9 1108 SUPERFAMILY SSF54001 9 337 1.37E-71 T 20-04-2016 APS56_RS03685 b7665a6bbf13dad613139dcd045b37e9 1108 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 7 82 2.5E-27 T 20-04-2016 IPR013589 Bacterial transglutaminase-like, N-terminal APS56_RS03685 b7665a6bbf13dad613139dcd045b37e9 1108 PANTHER PTHR33490:SF1 1 471 2.2E-218 T 20-04-2016 APS56_RS03685 b7665a6bbf13dad613139dcd045b37e9 1108 Gene3D G3DSA:3.90.260.10 176 253 4.7E-12 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS03685 b7665a6bbf13dad613139dcd045b37e9 1108 SMART SM00460 172 248 5.9E-21 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS03685 b7665a6bbf13dad613139dcd045b37e9 1108 Pfam PF01841 Transglutaminase-like superfamily 150 246 1.0E-18 T 20-04-2016 IPR002931 Transglutaminase-like APS56_RS03685 b7665a6bbf13dad613139dcd045b37e9 1108 PANTHER PTHR33490 1 471 2.2E-218 T 20-04-2016 APS56_RS08965 ab6d3843bcaee3755470eca771ce575b 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 127 3.6E-6 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS56_RS08965 ab6d3843bcaee3755470eca771ce575b 139 PANTHER PTHR39434 1 139 2.5E-43 T 20-04-2016 APS56_RS08965 ab6d3843bcaee3755470eca771ce575b 139 PANTHER PTHR39434:SF1 1 139 2.5E-43 T 20-04-2016 APS56_RS08965 ab6d3843bcaee3755470eca771ce575b 139 Gene3D G3DSA:3.10.180.10 5 134 3.7E-26 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS08965 ab6d3843bcaee3755470eca771ce575b 139 SUPERFAMILY SSF54593 2 129 3.58E-23 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06115 3b703af6b01a47a29203f4f1576e0ff3 416 PANTHER PTHR10342 1 398 7.6E-111 T 20-04-2016 APS56_RS06115 3b703af6b01a47a29203f4f1576e0ff3 416 Gene3D G3DSA:3.30.1120.10 299 398 1.2E-11 T 20-04-2016 APS56_RS06115 3b703af6b01a47a29203f4f1576e0ff3 416 ProSitePatterns PS00149 Sulfatases signature 2. 63 73 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS06115 3b703af6b01a47a29203f4f1576e0ff3 416 Gene3D G3DSA:3.40.720.10 1 298 1.4E-76 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06115 3b703af6b01a47a29203f4f1576e0ff3 416 PANTHER PTHR10342:SF199 1 398 7.6E-111 T 20-04-2016 APS56_RS06115 3b703af6b01a47a29203f4f1576e0ff3 416 ProSitePatterns PS00523 Sulfatases signature 1. 9 21 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS06115 3b703af6b01a47a29203f4f1576e0ff3 416 SUPERFAMILY SSF53649 1 398 3.78E-84 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06115 3b703af6b01a47a29203f4f1576e0ff3 416 Pfam PF00884 Sulfatase 1 285 1.2E-56 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS12700 a3660ba3a5b37e23f26ec35c93e5a49c 512 SUPERFAMILY SSF51126 41 351 8.28E-53 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS12700 a3660ba3a5b37e23f26ec35c93e5a49c 512 PANTHER PTHR31683:SF9 44 284 2.3E-106 T 20-04-2016 APS56_RS12700 a3660ba3a5b37e23f26ec35c93e5a49c 512 Gene3D G3DSA:2.160.20.10 379 408 2.0E-55 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS12700 a3660ba3a5b37e23f26ec35c93e5a49c 512 Gene3D G3DSA:2.160.20.10 38 336 2.0E-55 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS12700 a3660ba3a5b37e23f26ec35c93e5a49c 512 PANTHER PTHR31683 44 284 2.3E-106 T 20-04-2016 APS56_RS04145 26eb4a41313eeeb70b1c080855441202 381 Pfam PF05834 Lycopene cyclase protein 8 374 2.0E-53 T 20-04-2016 APS56_RS04145 26eb4a41313eeeb70b1c080855441202 381 SUPERFAMILY SSF51905 6 51 2.63E-7 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04145 26eb4a41313eeeb70b1c080855441202 381 SUPERFAMILY SSF51905 85 182 2.63E-7 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04145 26eb4a41313eeeb70b1c080855441202 381 Gene3D G3DSA:3.50.50.60 5 142 1.1E-5 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS16100 b4ec2bf6282d7d3171d2460b701544b8 291 PANTHER PTHR11048:SF27 23 283 4.9E-22 T 20-04-2016 APS56_RS16100 b4ec2bf6282d7d3171d2460b701544b8 291 PANTHER PTHR11048 23 283 4.9E-22 T 20-04-2016 APS56_RS16100 b4ec2bf6282d7d3171d2460b701544b8 291 Pfam PF01040 UbiA prenyltransferase family 21 250 2.9E-27 T 20-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APS56_RS08605 b6b97b86fbc519d075994327d0095928 436 Gene3D G3DSA:2.40.160.60 41 410 1.9E-20 T 20-04-2016 APS56_RS08605 b6b97b86fbc519d075994327d0095928 436 SUPERFAMILY SSF56935 47 343 2.2E-5 T 20-04-2016 APS56_RS04460 9696bf24a79cd49492194793668a1164 128 SUPERFAMILY SSF101386 35 89 9.91E-5 T 20-04-2016 APS56_RS04460 9696bf24a79cd49492194793668a1164 128 Gene3D G3DSA:1.10.3420.10 2 126 5.7E-42 T 20-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain APS56_RS04460 9696bf24a79cd49492194793668a1164 128 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 8 93 2.8E-22 T 20-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APS56_RS02755 b7c8368c7d773c6f7131b88cc968108c 139 SUPERFAMILY SSF116734 29 133 5.89E-5 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 PANTHER PTHR11532 1 415 1.7E-238 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 PANTHER PTHR11532 475 985 1.7E-238 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 PANTHER PTHR11532:SF57 1 415 1.7E-238 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 PANTHER PTHR11532:SF57 475 985 1.7E-238 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 Gene3D G3DSA:2.170.130.10 113 230 1.4E-23 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 Pfam PF13715 CarboxypepD_reg-like domain 25 105 8.2E-15 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 Gene3D G3DSA:2.40.170.20 828 987 2.1E-57 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 Gene3D G3DSA:2.40.170.20 231 264 2.1E-57 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 Gene3D G3DSA:2.40.170.20 298 765 2.1E-57 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 TIGRFAM TIGR04057 SusC_RagA_signa: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region 204 234 6.0E-19 T 20-04-2016 IPR023997 TonB-dependent outer membrane protein SusC/RagA, conserved site UniPathway: UPA00153 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 Pfam PF07715 TonB-dependent Receptor Plug Domain 113 228 7.0E-23 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 TIGRFAM TIGR04056 OMP_RagA_SusC: TonB-linked outer membrane protein, SusC/RagA family 24 987 2.4E-238 T 20-04-2016 IPR023996 TonB-dependent outer membrane protein, SusC/RagA UniPathway: UPA00153 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 SUPERFAMILY SSF49464 24 103 3.53E-14 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 SUPERFAMILY SSF56935 289 758 1.88E-97 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 SUPERFAMILY SSF56935 101 252 1.88E-97 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 SUPERFAMILY SSF56935 819 863 1.88E-97 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 SUPERFAMILY SSF56935 891 987 1.88E-97 T 20-04-2016 APS56_RS00585 d2e90231e02ea2d63a3de07f83c5a014 987 Gene3D G3DSA:2.60.40.1120 25 112 3.0E-9 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS14010 d2a11d7e4c191be6aa39c8601c396076 89 SUPERFAMILY SSF57716 2 89 1.35E-32 T 20-04-2016 APS56_RS14010 d2a11d7e4c191be6aa39c8601c396076 89 Gene3D G3DSA:4.10.830.10 35 89 4.1E-30 T 20-04-2016 APS56_RS14010 d2a11d7e4c191be6aa39c8601c396076 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 24.909 T 20-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid APS56_RS14010 d2a11d7e4c191be6aa39c8601c396076 89 PANTHER PTHR19836 1 89 9.6E-49 T 20-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS14010 d2a11d7e4c191be6aa39c8601c396076 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 20-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 APS56_RS14010 d2a11d7e4c191be6aa39c8601c396076 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 1.3E-27 T 20-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS05770 e2526509d6d5874f5ebf4af68eb68df7 315 SUPERFAMILY SSF55729 155 304 3.6E-11 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS05770 e2526509d6d5874f5ebf4af68eb68df7 315 Gene3D G3DSA:3.40.630.30 154 300 2.5E-6 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS10810 cbc9c39b9dde427a97d466ab3458b79b 379 PANTHER PTHR18964 3 379 1.7E-182 T 20-04-2016 APS56_RS10810 cbc9c39b9dde427a97d466ab3458b79b 379 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 377 7.5E-147 T 20-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APS56_RS10810 cbc9c39b9dde427a97d466ab3458b79b 379 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 30 375 3.6E-118 T 20-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APS56_RS10810 cbc9c39b9dde427a97d466ab3458b79b 379 Gene3D G3DSA:3.40.50.2000 2 212 1.7E-82 T 20-04-2016 APS56_RS10810 cbc9c39b9dde427a97d466ab3458b79b 379 PANTHER PTHR18964:SF2 3 379 1.7E-182 T 20-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APS56_RS10810 cbc9c39b9dde427a97d466ab3458b79b 379 SUPERFAMILY SSF53756 4 377 8.07E-132 T 20-04-2016 APS56_RS10810 cbc9c39b9dde427a97d466ab3458b79b 379 Gene3D G3DSA:3.40.50.2000 213 376 3.0E-64 T 20-04-2016 APS56_RS15125 4892b7e5791cf6b95c08bc2545d79747 447 SUPERFAMILY SSF48452 15 446 7.97E-81 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15125 4892b7e5791cf6b95c08bc2545d79747 447 Pfam PF14322 Starch-binding associating with outer membrane 92 205 5.3E-16 T 20-04-2016 APS56_RS15125 4892b7e5791cf6b95c08bc2545d79747 447 Pfam PF07980 SusD family 317 446 4.2E-27 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS15125 4892b7e5791cf6b95c08bc2545d79747 447 Gene3D G3DSA:1.25.40.10 188 396 1.9E-22 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS05760 8c6a93f5164beb8e044bed2b8035408d 428 PANTHER PTHR30250:SF9 1 423 1.5E-30 T 20-04-2016 APS56_RS05760 8c6a93f5164beb8e044bed2b8035408d 428 PANTHER PTHR30250 1 423 1.5E-30 T 20-04-2016 APS56_RS11310 045210d7f4d2457e42b4c666635092bb 150 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 145 1.7E-31 T 20-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APS56_RS11310 045210d7f4d2457e42b4c666635092bb 150 Gene3D G3DSA:3.30.479.10 3 145 2.4E-36 T 20-04-2016 APS56_RS11310 045210d7f4d2457e42b4c666635092bb 150 PANTHER PTHR12589 4 150 1.4E-28 T 20-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APS56_RS11310 045210d7f4d2457e42b4c666635092bb 150 SUPERFAMILY SSF55620 3 145 6.12E-35 T 20-04-2016 APS56_RS07710 fbc09fb39b359a3e7d7968848300b2fe 114 SUPERFAMILY SSF46785 9 102 1.08E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07710 fbc09fb39b359a3e7d7968848300b2fe 114 Gene3D G3DSA:1.10.10.10 4 109 1.3E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07710 fbc09fb39b359a3e7d7968848300b2fe 114 PANTHER PTHR33169:SF3 1 102 3.2E-28 T 20-04-2016 APS56_RS07710 fbc09fb39b359a3e7d7968848300b2fe 114 PANTHER PTHR33169 1 102 3.2E-28 T 20-04-2016 APS56_RS07710 fbc09fb39b359a3e7d7968848300b2fe 114 Pfam PF03551 Transcriptional regulator PadR-like family 19 89 1.2E-17 T 20-04-2016 IPR005149 Transcription regulator PadR, N-terminal APS56_RS11555 b151428a0db4a75070f871ea457e8e52 353 Pfam PF14064 HmuY protein 50 194 1.4E-11 T 20-04-2016 IPR025921 HmuY protein APS56_RS11555 b151428a0db4a75070f871ea457e8e52 353 Pfam PF14064 HmuY protein 216 349 4.1E-14 T 20-04-2016 IPR025921 HmuY protein APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 SUPERFAMILY SSF55120 2 245 8.78E-72 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 PANTHER PTHR11142:SF0 2 244 1.5E-70 T 20-04-2016 APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 Gene3D G3DSA:3.30.70.660 106 239 2.9E-36 T 20-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 236 7.0E-53 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 Pfam PF01416 tRNA pseudouridine synthase 148 242 4.1E-20 T 20-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 Gene3D G3DSA:3.30.70.580 2 104 3.1E-33 T 20-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 241 30.07 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 PANTHER PTHR11142 2 244 1.5E-70 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS04990 45c75d60f30b7c1e3be857ebc5f3ff34 247 PIRSF PIRSF001430 1 247 7.5E-74 T 20-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS08015 0ab12b047ccaade5fdd4f46b33358f7c 230 SUPERFAMILY SSF53448 2 207 1.13E-29 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS08015 0ab12b047ccaade5fdd4f46b33358f7c 230 Pfam PF00535 Glycosyl transferase family 2 6 145 9.3E-18 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS08015 0ab12b047ccaade5fdd4f46b33358f7c 230 Gene3D G3DSA:3.90.550.10 2 116 1.3E-13 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS08015 0ab12b047ccaade5fdd4f46b33358f7c 230 PANTHER PTHR10859 6 224 2.8E-38 T 20-04-2016 APS56_RS09590 ef8ef02774f09e1bf9a04a3f5ab3497a 438 SMART SM00752 7 266 2.2E-30 T 20-04-2016 IPR011020 HTTM APS56_RS09590 ef8ef02774f09e1bf9a04a3f5ab3497a 438 PANTHER PTHR12639:SF7 5 433 1.2E-68 T 20-04-2016 APS56_RS09590 ef8ef02774f09e1bf9a04a3f5ab3497a 438 PANTHER PTHR12639 5 433 1.2E-68 T 20-04-2016 IPR007782 Vitamin K-dependent gamma-carboxylase GO:0008488|GO:0017187 KEGG: 00130+4.1.1.90 APS56_RS09590 ef8ef02774f09e1bf9a04a3f5ab3497a 438 Pfam PF05090 Vitamin K-dependent gamma-carboxylase 17 433 2.3E-149 T 20-04-2016 IPR007782 Vitamin K-dependent gamma-carboxylase GO:0008488|GO:0017187 KEGG: 00130+4.1.1.90 APS56_RS05465 557f7b6f01592b8d6519c696d45ffebb 339 Pfam PF04173 TQO small subunit DoxD 15 176 3.3E-53 T 20-04-2016 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 APS56_RS05465 557f7b6f01592b8d6519c696d45ffebb 339 PIRSF PIRSF037390 5 339 4.5E-127 T 20-04-2016 IPR017192 Thiosulphate:quinone oxidoreductase, fused subunit DoxA/ DoxD APS56_RS05465 557f7b6f01592b8d6519c696d45ffebb 339 Pfam PF07680 TQO small subunit DoxA 205 334 2.2E-51 T 20-04-2016 IPR011636 Thiosulphate:quinone oxidoreductase small subunit DoxA KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 APS56_RS12515 d02b0273fdd2b175ee20f9143192152b 300 Gene3D G3DSA:3.60.21.10 25 171 3.9E-20 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS12515 d02b0273fdd2b175ee20f9143192152b 300 Gene3D G3DSA:3.60.21.10 210 263 3.9E-20 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS12515 d02b0273fdd2b175ee20f9143192152b 300 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 25 253 1.0E-6 T 20-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APS56_RS12515 d02b0273fdd2b175ee20f9143192152b 300 SUPERFAMILY SSF56300 25 110 2.81E-19 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS12515 d02b0273fdd2b175ee20f9143192152b 300 SUPERFAMILY SSF56300 210 281 2.81E-19 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS12515 d02b0273fdd2b175ee20f9143192152b 300 SUPERFAMILY SSF56300 141 171 2.81E-19 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS02195 4587caef51214e62aeb39739af1b831c 378 SUPERFAMILY SSF53756 21 376 2.37E-55 T 20-04-2016 APS56_RS02195 4587caef51214e62aeb39739af1b831c 378 Pfam PF13477 Glycosyl transferase 4-like 23 142 9.7E-11 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS02195 4587caef51214e62aeb39739af1b831c 378 Pfam PF00534 Glycosyl transferases group 1 190 347 1.3E-26 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS02195 4587caef51214e62aeb39739af1b831c 378 PANTHER PTHR12526:SF374 150 377 1.6E-30 T 20-04-2016 APS56_RS02195 4587caef51214e62aeb39739af1b831c 378 PANTHER PTHR12526 150 377 1.6E-30 T 20-04-2016 APS56_RS02195 4587caef51214e62aeb39739af1b831c 378 Gene3D G3DSA:3.40.50.2000 180 350 1.7E-20 T 20-04-2016 APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 SUPERFAMILY SSF46689 5 55 6.72E-8 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 SMART SM00871 132 287 9.5E-16 T 20-04-2016 IPR010499 Bacterial transcription activator, effector binding APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 PANTHER PTHR11019 5 112 1.9E-26 T 20-04-2016 APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 Gene3D G3DSA:1.10.10.60 2 57 1.9E-15 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 SUPERFAMILY SSF46689 57 107 6.27E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 SUPERFAMILY SSF55136 158 286 1.66E-14 T 20-04-2016 IPR011256 Regulatory factor, effector binding domain APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 Pfam PF14526 Integron-associated effector binding protein 145 286 7.8E-17 T 20-04-2016 IPR029441 Integron-associated effector binding protein APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 SMART SM00342 21 104 3.9E-23 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 Gene3D G3DSA:3.20.80.10 133 287 5.2E-21 T 20-04-2016 IPR011256 Regulatory factor, effector binding domain APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 Pfam PF12833 Helix-turn-helix domain 29 101 7.4E-18 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS14660 e69236c2cd81930a3efcaf65c71e9911 287 Gene3D G3DSA:1.10.10.60 58 105 2.9E-17 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS06410 a176f321ba6710a39f03772dbb37702c 122 PANTHER PTHR10584 1 67 2.8E-16 T 20-04-2016 APS56_RS06410 a176f321ba6710a39f03772dbb37702c 122 PANTHER PTHR10584:SF191 1 67 2.8E-16 T 20-04-2016 APS56_RS06410 a176f321ba6710a39f03772dbb37702c 122 Pfam PF04241 Protein of unknown function (DUF423) 20 107 1.4E-26 T 20-04-2016 IPR006696 Protein of unknown function DUF423 APS56_RS06085 385e4f8cabf11165a0b523d8694f768a 852 SUPERFAMILY SSF48230 113 384 2.11E-9 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS12995 4f45585115eaf19b3600a56b1d18800a 125 Pfam PF04892 VanZ like family 34 115 1.5E-9 T 20-04-2016 IPR006976 VanZ-like APS56_RS12995 4f45585115eaf19b3600a56b1d18800a 125 PANTHER PTHR28008 4 110 5.8E-12 T 20-04-2016 APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 Pfam PF01170 Putative RNA methylase family UPF0020 165 369 1.1E-40 T 20-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 Pfam PF02926 THUMP domain 35 156 2.2E-10 T 20-04-2016 IPR004114 THUMP domain GO:0003723 APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 Gene3D G3DSA:3.40.50.150 254 368 1.2E-22 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 Gene3D G3DSA:3.40.50.150 150 217 1.2E-22 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 SUPERFAMILY SSF53335 257 375 6.01E-40 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 SUPERFAMILY SSF53335 143 220 6.01E-40 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 SMART SM00981 59 157 3.2E-17 T 20-04-2016 IPR004114 THUMP domain GO:0003723 APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 PANTHER PTHR14911:SF13 254 372 1.3E-63 T 20-04-2016 APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 PANTHER PTHR14911:SF13 1 215 1.3E-63 T 20-04-2016 APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 198 209 - T 20-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 PANTHER PTHR14911 254 372 1.3E-63 T 20-04-2016 APS56_RS00295 2582efe7691769cbdf1d24b397012814 386 PANTHER PTHR14911 1 215 1.3E-63 T 20-04-2016 APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 SMART SM00347 23 123 2.2E-15 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 Gene3D G3DSA:1.10.10.10 10 140 1.1E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 PANTHER PTHR33164 1 147 2.4E-19 T 20-04-2016 APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 2.1E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 2.1E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 2.1E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 2.1E-6 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 20-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 Pfam PF01047 MarR family 32 88 2.2E-12 T 20-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APS56_RS07790 6c121ca34f9d096d1a779245dcfc40ad 148 SUPERFAMILY SSF46785 6 139 6.64E-26 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 Gene3D G3DSA:3.30.1120.10 436 512 3.3E-18 T 20-04-2016 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 ProSitePatterns PS00523 Sulfatases signature 1. 78 90 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 Pfam PF16347 Domain of unknown function (DUF4976) 411 511 5.4E-43 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 PANTHER PTHR10342 285 530 1.8E-172 T 20-04-2016 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 PANTHER PTHR10342 2 228 1.8E-172 T 20-04-2016 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 Pfam PF00884 Sulfatase 32 408 7.8E-64 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 Gene3D G3DSA:3.40.720.10 30 263 7.0E-116 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 Gene3D G3DSA:3.40.720.10 308 426 7.0E-116 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 SUPERFAMILY SSF53649 30 263 1.89E-126 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 SUPERFAMILY SSF53649 308 511 1.89E-126 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 PANTHER PTHR10342:SF237 285 530 1.8E-172 T 20-04-2016 APS56_RS03035 ccced3e39bac3c21092c5e9f2ba3022e 531 PANTHER PTHR10342:SF237 2 228 1.8E-172 T 20-04-2016 APS56_RS14730 98001251d055d3c596252ea8c42c9e64 403 Pfam PF01566 Natural resistance-associated macrophage protein 26 369 4.0E-16 T 20-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 SUPERFAMILY SSF53822 64 348 1.31E-28 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 Pfam PF13407 Periplasmic binding protein domain 78 324 5.9E-22 T 20-04-2016 IPR025997 Periplasmic binding protein APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 SUPERFAMILY SSF47413 7 63 1.69E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 54 1.5E-16 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 PANTHER PTHR30146 7 349 9.1E-47 T 20-04-2016 APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 Gene3D G3DSA:1.10.260.40 10 57 7.5E-21 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 SMART SM00354 7 77 7.6E-20 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 Gene3D G3DSA:3.40.50.2300 58 181 8.3E-12 T 20-04-2016 APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 Gene3D G3DSA:3.40.50.2300 182 340 2.1E-15 T 20-04-2016 APS56_RS06355 d00b282ff648979c5b8808ccb499d4e6 350 PANTHER PTHR30146:SF29 7 349 9.1E-47 T 20-04-2016 APS56_RS14905 dc4964a81d82b4d9394d7cbf1e76b0fa 319 Pfam PF01261 Xylose isomerase-like TIM barrel 60 257 3.0E-15 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS14905 dc4964a81d82b4d9394d7cbf1e76b0fa 319 SUPERFAMILY SSF51658 36 281 5.53E-28 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS14905 dc4964a81d82b4d9394d7cbf1e76b0fa 319 Gene3D G3DSA:3.20.20.150 50 315 4.7E-30 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS10415 19bd16309230cc161e819798add4e8ed 828 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 753 827 1.1E-9 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS10415 19bd16309230cc161e819798add4e8ed 828 SUPERFAMILY SSF49742 425 554 4.39E-18 T 20-04-2016 IPR008977 PHM/PNGase F domain GO:0003824 APS56_RS10415 19bd16309230cc161e819798add4e8ed 828 Gene3D G3DSA:2.60.120.230 459 552 4.8E-18 T 20-04-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 APS56_RS10415 19bd16309230cc161e819798add4e8ed 828 Gene3D G3DSA:2.60.120.230 583 687 4.5E-14 T 20-04-2016 IPR014784 Copper type II, ascorbate-dependent monooxygenase-like, C-terminal GO:0016715|GO:0055114 APS56_RS10415 19bd16309230cc161e819798add4e8ed 828 Pfam PF09113 Peptide-N-glycosidase F, C terminal 582 676 2.9E-11 T 20-04-2016 IPR015197 Peptide-N-glycosidase F, C-terminal APS56_RS10415 19bd16309230cc161e819798add4e8ed 828 Pfam PF09112 Peptide-N-glycosidase F, N terminal 494 547 9.3E-7 T 20-04-2016 IPR015196 Peptide-N-glycosidase F, N-terminal APS56_RS10415 19bd16309230cc161e819798add4e8ed 828 SUPERFAMILY SSF49742 557 688 6.28E-12 T 20-04-2016 IPR008977 PHM/PNGase F domain GO:0003824 APS56_RS07650 4483b84d11a25b50ed927b64059c4244 443 PANTHER PTHR33608:SF3 1 443 3.5E-116 T 20-04-2016 APS56_RS07650 4483b84d11a25b50ed927b64059c4244 443 PANTHER PTHR33608 1 443 3.5E-116 T 20-04-2016 APS56_RS07650 4483b84d11a25b50ed927b64059c4244 443 Pfam PF01882 Protein of unknown function DUF58 199 283 4.9E-18 T 20-04-2016 IPR002881 Domain of unknown function DUF58 APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Pfam PF13573 SprB repeat 2914 2942 1.4E-7 T 20-04-2016 IPR025667 SprB repeat APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Pfam PF13573 SprB repeat 2456 2490 4.3E-6 T 20-04-2016 IPR025667 SprB repeat APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Pfam PF13573 SprB repeat 2383 2406 9.2E-6 T 20-04-2016 IPR025667 SprB repeat APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Pfam PF13573 SprB repeat 1670 1706 3.2E-5 T 20-04-2016 IPR025667 SprB repeat APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Pfam PF13573 SprB repeat 3167 3199 2.5E-8 T 20-04-2016 IPR025667 SprB repeat APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Pfam PF13573 SprB repeat 2820 2857 1.5E-6 T 20-04-2016 IPR025667 SprB repeat APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Pfam PF13585 C-terminal domain of CHU protein family 3482 3549 6.8E-10 T 20-04-2016 APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Gene3D G3DSA:2.60.40.10 906 953 9.2E-5 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 Pfam PF01345 Domain of unknown function DUF11 463 502 1.3E-6 T 20-04-2016 IPR001434 Domain of unknown function DUF11 APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 3482 3562 2.5E-19 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS01005 936b788434b76f9b7fe4e28afe6fe886 3562 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 463 502 1.5E-8 T 20-04-2016 IPR001434 Domain of unknown function DUF11 APS56_RS10305 cf1df1be969e6f78dcced468e7800e10 555 Gene3D G3DSA:3.40.50.1110 95 262 1.8E-5 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS10305 cf1df1be969e6f78dcced468e7800e10 555 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 488 554 9.5E-11 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS10305 cf1df1be969e6f78dcced468e7800e10 555 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 153 264 2.6E-9 T 20-04-2016 IPR005181 Sialate O-acetylesterase domain APS56_RS10305 cf1df1be969e6f78dcced468e7800e10 555 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 28 133 1.2E-5 T 20-04-2016 IPR005181 Sialate O-acetylesterase domain APS56_RS10305 cf1df1be969e6f78dcced468e7800e10 555 PANTHER PTHR31988 26 283 1.9E-35 T 20-04-2016 APS56_RS10305 cf1df1be969e6f78dcced468e7800e10 555 SUPERFAMILY SSF52266 28 279 2.14E-48 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS10305 cf1df1be969e6f78dcced468e7800e10 555 PANTHER PTHR31988:SF1 26 283 1.9E-35 T 20-04-2016 APS56_RS05860 0860fa7d2583ebcfa0bd242111914be1 255 PANTHER PTHR30289 62 234 6.4E-12 T 20-04-2016 APS56_RS05860 0860fa7d2583ebcfa0bd242111914be1 255 Pfam PF14240 YHYH protein 112 206 1.8E-8 T 20-04-2016 IPR025924 YHYH domain APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 SUPERFAMILY SSF52402 1 143 1.93E-33 T 20-04-2016 APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 PANTHER PTHR31964 1 142 3.5E-30 T 20-04-2016 APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 PRINTS PR01438 Universal stress protein signature 118 140 1.1E-18 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 PRINTS PR01438 Universal stress protein signature 100 112 1.1E-18 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 PRINTS PR01438 Universal stress protein signature 1 19 1.1E-18 T 20-04-2016 IPR006015 Universal stress protein A APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 Pfam PF00582 Universal stress protein family 1 140 2.2E-29 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 Pfam PF00582 Universal stress protein family 148 275 9.3E-15 T 20-04-2016 IPR006016 UspA GO:0006950 APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 Gene3D G3DSA:3.40.50.620 1 141 4.5E-32 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 Gene3D G3DSA:3.40.50.620 147 276 1.4E-18 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 PANTHER PTHR31964:SF26 1 142 3.5E-30 T 20-04-2016 APS56_RS08715 6be1df3202d8d48d61b1365070186274 277 SUPERFAMILY SSF52402 151 276 2.26E-20 T 20-04-2016 APS56_RS11985 41f36a2b7eb7ff5cce8bc061fc03dd18 598 Pfam PF03929 PepSY-associated TM region 12 440 1.6E-47 T 20-04-2016 IPR005625 PepSY-associated TM protein APS56_RS11985 41f36a2b7eb7ff5cce8bc061fc03dd18 598 PANTHER PTHR34219 195 582 3.1E-43 T 20-04-2016 APS56_RS01010 062413477b09be46e4987c6062a605f5 326 Pfam PF11751 Protein of unknown function (DUF3308) 21 308 6.9E-69 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS01010 062413477b09be46e4987c6062a605f5 326 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 3 311 1.6E-61 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS03275 195fa3213f9a49688f077eb1788dcf65 431 Pfam PF11700 Vacuole effluxer Atg22 like 8 427 7.2E-75 T 20-04-2016 IPR024671 Autophagy-related protein 22-like APS56_RS03275 195fa3213f9a49688f077eb1788dcf65 431 SUPERFAMILY SSF103473 14 429 1.01E-26 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS03275 195fa3213f9a49688f077eb1788dcf65 431 PANTHER PTHR23519 1 427 2.3E-47 T 20-04-2016 APS56_RS03275 195fa3213f9a49688f077eb1788dcf65 431 Gene3D G3DSA:1.20.1250.20 249 429 1.3E-15 T 20-04-2016 APS56_RS03275 195fa3213f9a49688f077eb1788dcf65 431 Gene3D G3DSA:1.20.1250.20 52 204 5.1E-5 T 20-04-2016 APS56_RS02215 e2796f6e0dafb1558b587fc1e8dc1c22 283 SUPERFAMILY SSF53328 4 183 4.58E-26 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS02215 e2796f6e0dafb1558b587fc1e8dc1c22 283 Pfam PF00551 Formyl transferase 56 155 4.0E-11 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS02215 e2796f6e0dafb1558b587fc1e8dc1c22 283 Pfam PF02911 Formyl transferase, C-terminal domain 198 279 4.9E-5 T 20-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS02215 e2796f6e0dafb1558b587fc1e8dc1c22 283 Gene3D G3DSA:3.40.50.170 43 206 4.6E-22 T 20-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APS56_RS15260 6fb1bcf91932364db53a75c9b6e7048f 191 Gene3D G3DSA:1.25.40.10 51 167 2.3E-7 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15260 6fb1bcf91932364db53a75c9b6e7048f 191 SUPERFAMILY SSF81901 52 152 1.24E-8 T 20-04-2016 APS56_RS03835 8972b1e671a70617c941acaa187072e1 220 SMART SM00382 26 217 2.0E-9 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS03835 8972b1e671a70617c941acaa187072e1 220 PANTHER PTHR24220:SF111 3 218 8.4E-97 T 20-04-2016 APS56_RS03835 8972b1e671a70617c941acaa187072e1 220 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS03835 8972b1e671a70617c941acaa187072e1 220 SUPERFAMILY SSF52540 1 219 1.77E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03835 8972b1e671a70617c941acaa187072e1 220 Pfam PF00005 ABC transporter 17 168 1.7E-27 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS03835 8972b1e671a70617c941acaa187072e1 220 PANTHER PTHR24220 3 218 8.4E-97 T 20-04-2016 APS56_RS03835 8972b1e671a70617c941acaa187072e1 220 Gene3D G3DSA:3.40.50.300 1 219 1.2E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 Gene3D G3DSA:3.20.20.120 120 368 4.4E-77 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 Gene3D G3DSA:3.30.390.10 1 119 3.5E-48 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 SUPERFAMILY SSF51604 98 389 1.44E-72 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 PANTHER PTHR13794 183 405 2.0E-199 T 20-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 PANTHER PTHR13794 1 148 2.0E-199 T 20-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 SMART SM00922 128 259 2.1E-11 T 20-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 110 9.1E-29 T 20-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 SUPERFAMILY SSF54826 1 114 3.54E-32 T 20-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 PANTHER PTHR13794:SF61 183 405 2.0E-199 T 20-04-2016 APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 PANTHER PTHR13794:SF61 1 148 2.0E-199 T 20-04-2016 APS56_RS15115 e4c3d61448bf4063217d9ecb7ca67cb8 405 Pfam PF13378 Enolase C-terminal domain-like 196 380 1.2E-40 T 20-04-2016 IPR029065 Enolase C-terminal domain-like APS56_RS00360 0a7fe12e049fb0d2efe8fa6ffa79cc49 148 SUPERFAMILY SSF52172 6 134 1.42E-23 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS00360 0a7fe12e049fb0d2efe8fa6ffa79cc49 148 Gene3D G3DSA:3.40.50.2300 4 129 1.2E-26 T 20-04-2016 APS56_RS00360 0a7fe12e049fb0d2efe8fa6ffa79cc49 148 Pfam PF00072 Response regulator receiver domain 8 124 6.9E-18 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS00360 0a7fe12e049fb0d2efe8fa6ffa79cc49 148 PANTHER PTHR26402 6 114 2.5E-20 T 20-04-2016 APS56_RS00360 0a7fe12e049fb0d2efe8fa6ffa79cc49 148 SMART SM00448 6 124 2.4E-15 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS10120 94de78f8a3f34d83561fe158fd157ac5 800 SUPERFAMILY SSF56935 314 799 4.03E-88 T 20-04-2016 APS56_RS10120 94de78f8a3f34d83561fe158fd157ac5 800 SUPERFAMILY SSF56935 89 280 4.03E-88 T 20-04-2016 APS56_RS10120 94de78f8a3f34d83561fe158fd157ac5 800 Gene3D G3DSA:2.40.170.20 219 799 1.1E-58 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10120 94de78f8a3f34d83561fe158fd157ac5 800 Pfam PF00593 TonB dependent receptor 536 799 6.9E-23 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10120 94de78f8a3f34d83561fe158fd157ac5 800 Pfam PF07715 TonB-dependent Receptor Plug Domain 109 216 2.3E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10120 94de78f8a3f34d83561fe158fd157ac5 800 Gene3D G3DSA:2.170.130.10 89 218 3.4E-30 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS10120 94de78f8a3f34d83561fe158fd157ac5 800 PANTHER PTHR32552 311 800 2.6E-27 T 20-04-2016 APS56_RS10120 94de78f8a3f34d83561fe158fd157ac5 800 PANTHER PTHR32552 95 280 2.6E-27 T 20-04-2016 APS56_RS00375 0791a1ec8b268958ad7a9fbd85f0d78b 145 SUPERFAMILY SSF50475 14 142 1.38E-23 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APS56_RS00375 0791a1ec8b268958ad7a9fbd85f0d78b 145 PANTHER PTHR34818 11 139 1.5E-22 T 20-04-2016 APS56_RS00375 0791a1ec8b268958ad7a9fbd85f0d78b 145 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 12 144 2.6E-36 T 20-04-2016 APS56_RS00375 0791a1ec8b268958ad7a9fbd85f0d78b 145 Gene3D G3DSA:2.30.110.10 11 143 1.5E-35 T 20-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 PANTHER PTHR22935 216 516 5.0E-16 T 20-04-2016 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 Gene3D G3DSA:2.30.40.10 443 511 3.7E-6 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 PANTHER PTHR22935:SF55 216 516 5.0E-16 T 20-04-2016 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 SUPERFAMILY SSF51338 26 83 1.71E-19 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 SUPERFAMILY SSF51338 457 508 1.71E-19 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 Pfam PF07969 Amidohydrolase family 71 255 4.8E-15 T 20-04-2016 IPR013108 Amidohydrolase 3 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 Gene3D G3DSA:3.20.20.140 88 289 4.5E-82 T 20-04-2016 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 Gene3D G3DSA:3.20.20.140 385 442 4.5E-82 T 20-04-2016 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 Gene3D G3DSA:2.30.40.10 28 87 1.1E-14 T 20-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 SUPERFAMILY SSF51556 83 297 9.8E-61 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS08920 08cd3ba654e31ec78b1ad4c2ebd3f2d2 519 SUPERFAMILY SSF51556 334 457 9.8E-61 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS14535 5ea7ba0c6b14fbcf2a284bee545ea4ae 109 Pfam PF04977 Septum formation initiator 22 97 2.2E-12 T 20-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 APS56_RS10290 38e04c1a15b85bb44c31d602684abedf 260 Pfam PF03724 META domain 153 256 6.5E-24 T 20-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ APS56_RS10290 38e04c1a15b85bb44c31d602684abedf 260 Pfam PF04170 NlpE N-terminal domain 56 138 3.0E-27 T 20-04-2016 IPR007298 Copper resistance lipoprotein NlpE APS56_RS10290 38e04c1a15b85bb44c31d602684abedf 260 PANTHER PTHR35535 155 245 8.7E-18 T 20-04-2016 APS56_RS05740 0ec03b3838d075c0e4b55d301799abfa 312 Gene3D G3DSA:3.90.550.10 3 232 1.5E-53 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05740 0ec03b3838d075c0e4b55d301799abfa 312 Pfam PF00535 Glycosyl transferase family 2 6 170 9.8E-34 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS05740 0ec03b3838d075c0e4b55d301799abfa 312 SUPERFAMILY SSF53448 3 230 1.69E-58 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05740 0ec03b3838d075c0e4b55d301799abfa 312 PANTHER PTHR22916 2 228 9.8E-26 T 20-04-2016 APS56_RS05740 0ec03b3838d075c0e4b55d301799abfa 312 PANTHER PTHR22916:SF26 2 228 9.8E-26 T 20-04-2016 APS56_RS13820 438074605e2ac0c4268a3eabebbc7a09 765 SUPERFAMILY SSF55486 348 585 1.03E-36 T 20-04-2016 APS56_RS13820 438074605e2ac0c4268a3eabebbc7a09 765 Gene3D G3DSA:1.10.390.10 443 585 2.0E-15 T 20-04-2016 APS56_RS13820 438074605e2ac0c4268a3eabebbc7a09 765 PANTHER PTHR11533 305 584 1.7E-36 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APS56_RS13820 438074605e2ac0c4268a3eabebbc7a09 765 PANTHER PTHR11533 8 122 1.7E-36 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APS56_RS13820 438074605e2ac0c4268a3eabebbc7a09 765 PANTHER PTHR11533 154 268 1.7E-36 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APS56_RS13820 438074605e2ac0c4268a3eabebbc7a09 765 PANTHER PTHR11533:SF163 305 584 1.7E-36 T 20-04-2016 APS56_RS13820 438074605e2ac0c4268a3eabebbc7a09 765 PANTHER PTHR11533:SF163 8 122 1.7E-36 T 20-04-2016 APS56_RS13820 438074605e2ac0c4268a3eabebbc7a09 765 PANTHER PTHR11533:SF163 154 268 1.7E-36 T 20-04-2016 APS56_RS15250 1e7dca4817a483c069d6655e4d94d5f6 306 Gene3D G3DSA:1.10.530.10 89 241 8.5E-38 T 20-04-2016 APS56_RS15250 1e7dca4817a483c069d6655e4d94d5f6 306 SUPERFAMILY SSF53955 74 231 1.11E-29 T 20-04-2016 IPR023346 Lysozyme-like domain APS56_RS15250 1e7dca4817a483c069d6655e4d94d5f6 306 PANTHER PTHR21666 1 297 9.0E-59 T 20-04-2016 APS56_RS15250 1e7dca4817a483c069d6655e4d94d5f6 306 Pfam PF01464 Transglycosylase SLT domain 101 201 2.4E-19 T 20-04-2016 IPR008258 Transglycosylase SLT domain 1 APS56_RS15250 1e7dca4817a483c069d6655e4d94d5f6 306 PANTHER PTHR21666:SF182 1 297 9.0E-59 T 20-04-2016 APS56_RS05410 23f5547a142b699d672fc827d0b21b3e 266 Gene3D G3DSA:3.30.1950.10 54 147 7.8E-13 T 20-04-2016 APS56_RS05410 23f5547a142b699d672fc827d0b21b3e 266 Pfam PF02563 Polysaccharide biosynthesis/export protein 46 144 8.6E-17 T 20-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APS56_RS05410 23f5547a142b699d672fc827d0b21b3e 266 Gene3D G3DSA:3.10.560.10 148 229 1.1E-10 T 20-04-2016 APS56_RS05410 23f5547a142b699d672fc827d0b21b3e 266 PANTHER PTHR33619 49 69 3.2E-29 T 20-04-2016 APS56_RS05410 23f5547a142b699d672fc827d0b21b3e 266 PANTHER PTHR33619 94 256 3.2E-29 T 20-04-2016 APS56_RS15750 14d3ca62311d1f6dd8dc5eb675812ad2 312 PANTHER PTHR24220 7 243 3.4E-73 T 20-04-2016 APS56_RS15750 14d3ca62311d1f6dd8dc5eb675812ad2 312 Pfam PF00005 ABC transporter 22 165 2.0E-29 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS15750 14d3ca62311d1f6dd8dc5eb675812ad2 312 Gene3D G3DSA:3.40.50.300 4 233 3.9E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS15750 14d3ca62311d1f6dd8dc5eb675812ad2 312 SMART SM00382 30 212 7.2E-10 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS15750 14d3ca62311d1f6dd8dc5eb675812ad2 312 SUPERFAMILY SSF52540 5 223 1.03E-58 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01790 42424cffae7203046930c9578d38b6d8 475 SUPERFAMILY SSF52540 415 471 1.84E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01790 42424cffae7203046930c9578d38b6d8 475 SUPERFAMILY SSF52540 20 362 1.84E-40 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01790 42424cffae7203046930c9578d38b6d8 475 Pfam PF13538 UvrD-like helicase C-terminal domain 416 465 4.7E-19 T 20-04-2016 IPR027785 UvrD-like helicase C-terminal domain APS56_RS01790 42424cffae7203046930c9578d38b6d8 475 Gene3D G3DSA:3.40.50.300 11 215 9.9E-25 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01790 42424cffae7203046930c9578d38b6d8 475 Gene3D G3DSA:3.40.50.300 418 469 5.3E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01790 42424cffae7203046930c9578d38b6d8 475 Gene3D G3DSA:3.40.50.300 240 287 5.3E-12 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS01790 42424cffae7203046930c9578d38b6d8 475 Pfam PF13604 AAA domain 37 220 5.8E-23 T 20-04-2016 APS56_RS08040 251da189960b90e057d670a34be09d50 422 Gene3D G3DSA:3.40.1080.10 1 171 3.8E-63 T 20-04-2016 APS56_RS08040 251da189960b90e057d670a34be09d50 422 PANTHER PTHR21432 1 416 9.7E-197 T 20-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 APS56_RS08040 251da189960b90e057d670a34be09d50 422 SUPERFAMILY SSF100950 176 411 1.74E-66 T 20-04-2016 APS56_RS08040 251da189960b90e057d670a34be09d50 422 Gene3D G3DSA:3.40.810.20 176 414 1.5E-47 T 20-04-2016 APS56_RS08040 251da189960b90e057d670a34be09d50 422 SUPERFAMILY SSF100950 1 211 5.23E-45 T 20-04-2016 APS56_RS08040 251da189960b90e057d670a34be09d50 422 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 260 411 1.3E-62 T 20-04-2016 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain APS56_RS08040 251da189960b90e057d670a34be09d50 422 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 3 169 5.6E-19 T 20-04-2016 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 APS56_RS08040 251da189960b90e057d670a34be09d50 422 PANTHER PTHR21432:SF18 1 416 9.7E-197 T 20-04-2016 APS56_RS16605 5b078ff9161104338f3e23700cde38c0 317 PIRSF PIRSF002849 1 317 9.3E-120 T 20-04-2016 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted APS56_RS16605 5b078ff9161104338f3e23700cde38c0 317 Gene3D G3DSA:1.10.8.300 204 316 5.6E-33 T 20-04-2016 APS56_RS16605 5b078ff9161104338f3e23700cde38c0 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 44 173 1.3E-62 T 20-04-2016 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 APS56_RS16605 5b078ff9161104338f3e23700cde38c0 317 PANTHER PTHR11603 1 314 1.7E-131 T 20-04-2016 APS56_RS16605 5b078ff9161104338f3e23700cde38c0 317 SUPERFAMILY SSF52540 10 295 1.73E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS16605 5b078ff9161104338f3e23700cde38c0 317 PANTHER PTHR11603:SF156 1 314 1.7E-131 T 20-04-2016 APS56_RS16605 5b078ff9161104338f3e23700cde38c0 317 Gene3D G3DSA:3.40.50.300 26 189 1.9E-43 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 PIRSF PIRSF037892 1 536 2.4E-216 T 20-04-2016 IPR017308 Peptidase S8A, subtilisin-related, bacteroidetes APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 458 468 - T 20-04-2016 IPR023828 Peptidase S8, subtilisin, Ser-active site APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 Pfam PF00082 Subtilase family 80 493 4.8E-47 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 291 301 - T 20-04-2016 IPR022398 Peptidase S8, subtilisin, His-active site APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 PANTHER PTHR10795 65 102 2.9E-48 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 PANTHER PTHR10795 259 493 2.9E-48 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 SUPERFAMILY SSF52743 291 529 1.63E-68 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 SUPERFAMILY SSF52743 64 138 1.63E-68 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 Gene3D G3DSA:3.40.50.200 267 534 5.5E-78 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 Gene3D G3DSA:3.40.50.200 44 106 5.5E-78 T 20-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 85 96 - T 20-04-2016 IPR023827 Peptidase S8, subtilisin, Asp-active site APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 PRINTS PR00723 Subtilisin serine protease family (S8) signature 80 99 2.2E-19 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 PRINTS PR00723 Subtilisin serine protease family (S8) signature 287 300 2.2E-19 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 PRINTS PR00723 Subtilisin serine protease family (S8) signature 457 473 2.2E-19 T 20-04-2016 IPR015500 Peptidase S8, subtilisin-related APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 PANTHER PTHR10795:SF419 65 102 2.9E-48 T 20-04-2016 APS56_RS11060 56dd25386ab27d540dd19c615d067533 536 PANTHER PTHR10795:SF419 259 493 2.9E-48 T 20-04-2016 APS56_RS04030 7560c7b7c8b39f5303522d5074e82ad2 298 PANTHER PTHR22911 7 287 5.4E-54 T 20-04-2016 APS56_RS04030 7560c7b7c8b39f5303522d5074e82ad2 298 Pfam PF00892 EamA-like transporter family 145 285 3.5E-11 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS04030 7560c7b7c8b39f5303522d5074e82ad2 298 SUPERFAMILY SSF103481 181 286 6.02E-7 T 20-04-2016 APS56_RS04030 7560c7b7c8b39f5303522d5074e82ad2 298 PANTHER PTHR22911:SF71 7 287 5.4E-54 T 20-04-2016 APS56_RS07820 1c3d736f0f19b3b5bd9de009e65b09a6 190 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 126 183 8.5E-20 T 20-04-2016 APS56_RS05890 d8c128b11fbeeee57287737e92f94ccc 277 Gene3D G3DSA:3.20.20.140 2 275 4.0E-68 T 20-04-2016 APS56_RS05890 d8c128b11fbeeee57287737e92f94ccc 277 SUPERFAMILY SSF51556 3 275 9.46E-66 T 20-04-2016 IPR032466 Metal-dependent hydrolase APS56_RS05890 d8c128b11fbeeee57287737e92f94ccc 277 PANTHER PTHR21240 1 277 8.7E-70 T 20-04-2016 APS56_RS05890 d8c128b11fbeeee57287737e92f94ccc 277 PANTHER PTHR21240:SF1 1 277 8.7E-70 T 20-04-2016 APS56_RS05890 d8c128b11fbeeee57287737e92f94ccc 277 Pfam PF04909 Amidohydrolase 3 275 3.3E-39 T 20-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 Pfam PF01967 MoaC family 1 135 2.2E-40 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 SMART SM00852 150 293 3.2E-21 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 Gene3D G3DSA:3.30.70.640 1 139 8.5E-44 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 SUPERFAMILY SSF53218 147 298 3.4E-41 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 1 137 1.1E-42 T 20-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 Gene3D G3DSA:3.40.980.10 145 299 3.2E-46 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 147 287 1.2E-30 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 PIRSF PIRSF036594 1 303 6.9E-80 T 20-04-2016 IPR012247 Bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA GO:0006777 UniPathway: UPA00344 APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 SUPERFAMILY SSF55040 1 138 1.57E-43 T 20-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 PANTHER PTHR10192 140 301 2.0E-51 T 20-04-2016 APS56_RS03790 a895c65b56fa35a6bbf7fc3b8b815b35 303 Pfam PF00994 Probable molybdopterin binding domain 150 290 5.8E-29 T 20-04-2016 IPR001453 MoaB/Mog domain APS56_RS15295 dd788b012302629fd304ba10ab3d5f75 460 PANTHER PTHR30563 81 460 4.4E-98 T 20-04-2016 APS56_RS15295 dd788b012302629fd304ba10ab3d5f75 460 Pfam PF02646 RmuC family 152 447 2.4E-104 T 20-04-2016 IPR003798 DNA recombination RmuC APS56_RS07255 bfffbc70928f5a643d9ac68530cc9137 380 Pfam PF07690 Major Facilitator Superfamily 13 342 8.8E-40 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS07255 bfffbc70928f5a643d9ac68530cc9137 380 PANTHER PTHR23501 3 345 3.2E-32 T 20-04-2016 APS56_RS07255 bfffbc70928f5a643d9ac68530cc9137 380 SUPERFAMILY SSF103473 9 377 1.23E-47 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS07255 bfffbc70928f5a643d9ac68530cc9137 380 Gene3D G3DSA:1.20.1250.20 202 376 4.9E-16 T 20-04-2016 APS56_RS07255 bfffbc70928f5a643d9ac68530cc9137 380 Gene3D G3DSA:1.20.1250.20 10 190 8.2E-24 T 20-04-2016 APS56_RS16205 2448c830cfdc846638d4d9f1f6ca0c69 93 Pfam PF16118 Domain of unknown function (DUF4834) 13 92 2.9E-9 T 20-04-2016 IPR032272 Protein of unknown function DUF4834 APS56_RS03610 2175f66335b961576183613a20880f9e 97 PANTHER PTHR12599 1 93 6.2E-30 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APS56_RS03610 2175f66335b961576183613a20880f9e 97 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 1 92 20.772 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APS56_RS03610 2175f66335b961576183613a20880f9e 97 Gene3D G3DSA:3.30.1360.20 2 92 4.3E-31 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APS56_RS03610 2175f66335b961576183613a20880f9e 97 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 3 91 3.6E-29 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APS56_RS03610 2175f66335b961576183613a20880f9e 97 SUPERFAMILY SSF55248 1 92 5.76E-31 T 20-04-2016 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 190 1.0E-44 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 PANTHER PTHR11071 37 187 3.0E-59 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 266 369 2.6E-16 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 SUPERFAMILY SSF50891 33 192 1.31E-55 T 20-04-2016 IPR029000 Cyclophilin-like domain APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 79 96 - T 20-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 Gene3D G3DSA:3.10.50.40 220 372 6.9E-28 T 20-04-2016 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 Gene3D G3DSA:2.40.100.10 17 197 1.1E-58 T 20-04-2016 IPR029000 Cyclophilin-like domain APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 SUPERFAMILY SSF54534 184 370 1.0E-24 T 20-04-2016 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 61 5.6E-24 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 152 167 5.6E-24 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 96 5.6E-24 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 5.6E-24 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS14385 ff9ecd31e1bb2a37aaa2a32fbcbd4a97 373 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 124 139 5.6E-24 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS05600 532fa19f182eeb3df164e5bc25f11924 296 Gene3D G3DSA:1.10.443.10 109 286 2.5E-46 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS05600 532fa19f182eeb3df164e5bc25f11924 296 Pfam PF00589 Phage integrase family 114 278 3.5E-37 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS05600 532fa19f182eeb3df164e5bc25f11924 296 SUPERFAMILY SSF56349 7 286 6.47E-49 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS05600 532fa19f182eeb3df164e5bc25f11924 296 PANTHER PTHR30349 6 296 4.1E-71 T 20-04-2016 APS56_RS05600 532fa19f182eeb3df164e5bc25f11924 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 84 3.2E-15 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APS56_RS05600 532fa19f182eeb3df164e5bc25f11924 296 PANTHER PTHR30349:SF5 6 296 4.1E-71 T 20-04-2016 APS56_RS05600 532fa19f182eeb3df164e5bc25f11924 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 294 27.392 T 20-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APS56_RS05600 532fa19f182eeb3df164e5bc25f11924 296 Gene3D G3DSA:1.10.150.130 6 96 2.0E-19 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal APS56_RS07585 d057d88d93c26ae2b0b44b19607e28a8 240 Pfam PF00487 Fatty acid desaturase 7 224 3.2E-16 T 20-04-2016 IPR005804 Fatty acid desaturase domain GO:0006629 APS56_RS07585 d057d88d93c26ae2b0b44b19607e28a8 240 PANTHER PTHR11351:SF34 1 238 4.9E-39 T 20-04-2016 APS56_RS07585 d057d88d93c26ae2b0b44b19607e28a8 240 PANTHER PTHR11351 1 238 4.9E-39 T 20-04-2016 APS56_RS15320 b474d3e8a79e83886c28d975b3dd89f8 360 SUPERFAMILY SSF63825 94 342 1.67E-16 T 20-04-2016 APS56_RS15320 b474d3e8a79e83886c28d975b3dd89f8 360 Gene3D G3DSA:2.130.10.10 89 340 1.2E-16 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS15385 8ef8259d3cc9d7f811a0a3dc1270c102 236 SUPERFAMILY SSF52218 10 200 8.85E-29 T 20-04-2016 IPR029039 Flavoprotein-like domain APS56_RS15385 8ef8259d3cc9d7f811a0a3dc1270c102 236 PANTHER PTHR10204:SF48 9 224 1.6E-23 T 20-04-2016 APS56_RS15385 8ef8259d3cc9d7f811a0a3dc1270c102 236 PANTHER PTHR10204 9 224 1.6E-23 T 20-04-2016 APS56_RS15385 8ef8259d3cc9d7f811a0a3dc1270c102 236 Gene3D G3DSA:3.40.50.360 12 172 1.7E-16 T 20-04-2016 IPR029039 Flavoprotein-like domain APS56_RS15385 8ef8259d3cc9d7f811a0a3dc1270c102 236 Pfam PF03358 NADPH-dependent FMN reductase 13 153 2.0E-12 T 20-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 20-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 PANTHER PTHR24960 64 113 1.4E-18 T 20-04-2016 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 PANTHER PTHR24960 1 44 1.4E-18 T 20-04-2016 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 SUPERFAMILY SSF54862 64 103 7.33E-15 T 20-04-2016 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 SUPERFAMILY SSF54862 4 29 7.33E-15 T 20-04-2016 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 PANTHER PTHR24960:SF38 64 113 1.4E-18 T 20-04-2016 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 PANTHER PTHR24960:SF38 1 44 1.4E-18 T 20-04-2016 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 Gene3D G3DSA:3.30.70.20 63 108 1.1E-14 T 20-04-2016 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 Gene3D G3DSA:3.30.70.20 3 28 1.1E-14 T 20-04-2016 APS56_RS00705 02aaeffa907668c8b06265ab8be04578 117 Pfam PF12838 4Fe-4S dicluster domain 9 91 5.1E-8 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS04840 a4a4d2075802d35f9f75e8f108561f5d 99 Pfam PF12762 ISXO2-like transposase domain 1 99 2.9E-21 T 20-04-2016 IPR024445 ISXO2-like transposase domain APS56_RS04840 a4a4d2075802d35f9f75e8f108561f5d 99 SMART SM01126 1 99 0.0023 T 20-04-2016 IPR024445 ISXO2-like transposase domain APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 PANTHER PTHR33280:SF2 1 83 9.1E-30 T 20-04-2016 APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 SUPERFAMILY SSF143800 1 80 5.49E-20 T 20-04-2016 APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.1E-19 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 PANTHER PTHR33280 1 83 9.1E-30 T 20-04-2016 APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 PRINTS PR01249 Ribosomal protein L31 signature 2 19 2.2E-14 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 PRINTS PR01249 Ribosomal protein L31 signature 45 60 2.2E-14 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 PRINTS PR01249 Ribosomal protein L31 signature 60 78 2.2E-14 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS15215 cd1062c83309258c75fae18825f4f6c1 83 Pfam PF01197 Ribosomal protein L31 1 79 1.7E-27 T 20-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03215 073ba5f190774637344e26130e9ea8c4 128 SUPERFAMILY SSF54637 5 119 1.1E-23 T 20-04-2016 IPR029069 HotDog domain APS56_RS03215 073ba5f190774637344e26130e9ea8c4 128 Gene3D G3DSA:3.10.129.10 3 115 1.9E-23 T 20-04-2016 IPR029069 HotDog domain APS56_RS03215 073ba5f190774637344e26130e9ea8c4 128 PANTHER PTHR11049:SF13 1 110 2.3E-49 T 20-04-2016 APS56_RS03215 073ba5f190774637344e26130e9ea8c4 128 PANTHER PTHR11049 1 110 2.3E-49 T 20-04-2016 APS56_RS03215 073ba5f190774637344e26130e9ea8c4 128 Pfam PF03061 Thioesterase superfamily 17 91 1.2E-15 T 20-04-2016 IPR006683 Thioesterase domain APS56_RS14145 cb920c256fc83638afa28fb431cf367d 193 PRINTS PR00502 NUDIX hydrolase family signature 106 121 3.7E-6 T 20-04-2016 IPR020476 NUDIX hydrolase APS56_RS14145 cb920c256fc83638afa28fb431cf367d 193 PRINTS PR00502 NUDIX hydrolase family signature 92 106 3.7E-6 T 20-04-2016 IPR020476 NUDIX hydrolase APS56_RS14145 cb920c256fc83638afa28fb431cf367d 193 Gene3D G3DSA:3.90.79.10 73 192 2.3E-23 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS14145 cb920c256fc83638afa28fb431cf367d 193 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 20-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APS56_RS14145 cb920c256fc83638afa28fb431cf367d 193 SUPERFAMILY SSF55811 67 183 1.35E-24 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS14145 cb920c256fc83638afa28fb431cf367d 193 PANTHER PTHR22769 76 178 6.1E-17 T 20-04-2016 APS56_RS14145 cb920c256fc83638afa28fb431cf367d 193 Pfam PF00293 NUDIX domain 76 183 9.6E-19 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APS56_RS09125 12b5b2906346817683856449f46e7ba4 149 Gene3D G3DSA:2.40.70.10 26 131 7.2E-5 T 20-04-2016 IPR021109 Aspartic peptidase domain APS56_RS09125 12b5b2906346817683856449f46e7ba4 149 Pfam PF13650 Aspartyl protease 30 128 2.0E-12 T 20-04-2016 APS56_RS09125 12b5b2906346817683856449f46e7ba4 149 SUPERFAMILY SSF50630 21 137 3.13E-11 T 20-04-2016 IPR021109 Aspartic peptidase domain APS56_RS16455 38f0f5f43d040ee4ce566c6ec569a120 135 Pfam PF02566 OsmC-like protein 36 126 4.8E-9 T 20-04-2016 IPR003718 OsmC/Ohr family APS56_RS16455 38f0f5f43d040ee4ce566c6ec569a120 135 SUPERFAMILY SSF82784 3 129 5.63E-13 T 20-04-2016 IPR003718 OsmC/Ohr family APS56_RS16455 38f0f5f43d040ee4ce566c6ec569a120 135 Gene3D G3DSA:3.30.300.20 33 132 7.4E-8 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS08570 95026791fecc62d11f419bba05594f30 440 PANTHER PTHR10572:SF6 4 401 1.2E-116 T 20-04-2016 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 35 397 2.7E-99 T 20-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 Gene3D G3DSA:3.90.770.10 4 118 5.4E-82 T 20-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 Gene3D G3DSA:3.90.770.10 247 386 5.4E-82 T 20-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 PANTHER PTHR10572 4 401 1.2E-116 T 20-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 SUPERFAMILY SSF55035 115 231 4.18E-20 T 20-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 1 397 1.0E-89 T 20-04-2016 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 325 346 6.2E-7 T 20-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 79 99 6.2E-7 T 20-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 175 193 6.2E-7 T 20-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 52 73 6.2E-7 T 20-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 Gene3D G3DSA:3.30.70.420 119 230 1.3E-25 T 20-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 SUPERFAMILY SSF56542 5 121 2.22E-86 T 20-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS08570 95026791fecc62d11f419bba05594f30 440 SUPERFAMILY SSF56542 242 434 2.22E-86 T 20-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 APS56_RS01895 f96cc7e2968a1be1342b62b83fb68dc2 810 Gene3D G3DSA:3.40.390.10 244 523 1.1E-18 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS01895 f96cc7e2968a1be1342b62b83fb68dc2 810 PANTHER PTHR38478 1 787 4.7E-145 T 20-04-2016 APS56_RS01895 f96cc7e2968a1be1342b62b83fb68dc2 810 Pfam PF17162 Domain of unknown function (DUF5118) 49 96 2.5E-16 T 20-04-2016 IPR033428 Domain of unknown function DUF5118 APS56_RS01895 f96cc7e2968a1be1342b62b83fb68dc2 810 Pfam PF16313 Met-zincin 432 735 1.8E-100 T 20-04-2016 IPR032534 Domian of unknown function DUF4953 APS56_RS01895 f96cc7e2968a1be1342b62b83fb68dc2 810 Pfam PF17148 Domain of unknown function (DUF5117) 109 297 6.2E-56 T 20-04-2016 IPR033413 Domain of unknown function DUF5117 APS56_RS01895 f96cc7e2968a1be1342b62b83fb68dc2 810 SUPERFAMILY SSF55486 239 520 5.87E-24 T 20-04-2016 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.9E-8 T 20-04-2016 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.9E-8 T 20-04-2016 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 303 1.9E-8 T 20-04-2016 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 SUPERFAMILY SSF51905 4 184 2.33E-28 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 PANTHER PTHR10632 5 112 6.7E-18 T 20-04-2016 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 8.2E-45 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 PANTHER PTHR10632:SF8 5 112 6.7E-18 T 20-04-2016 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 Gene3D G3DSA:3.50.50.60 106 331 1.6E-22 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 SUPERFAMILY SSF51905 153 334 5.18E-18 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 Gene3D G3DSA:3.50.50.60 4 105 8.5E-21 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.3E-7 T 20-04-2016 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 1.3E-7 T 20-04-2016 APS56_RS14925 104d9d06196fbee7416b0e1fb85a4b96 426 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 303 1.3E-7 T 20-04-2016 APS56_RS09280 8505448cbb3633fedf9b1c9303e7ac26 215 Pfam PF10677 Protein of unknown function (DUF2490) 21 207 1.7E-50 T 20-04-2016 IPR019619 Protein of unknown function DUF2490 APS56_RS09280 8505448cbb3633fedf9b1c9303e7ac26 215 SUPERFAMILY SSF56935 22 202 2.61E-5 T 20-04-2016 APS56_RS05620 865cdb613175cc51e8b0de465dc180a1 289 SUPERFAMILY SSF47781 216 286 1.33E-13 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APS56_RS05620 865cdb613175cc51e8b0de465dc180a1 289 SUPERFAMILY SSF47781 153 219 4.45E-12 T 20-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APS56_RS05620 865cdb613175cc51e8b0de465dc180a1 289 Gene3D G3DSA:1.10.150.280 214 285 4.4E-13 T 20-04-2016 APS56_RS05620 865cdb613175cc51e8b0de465dc180a1 289 Gene3D G3DSA:1.10.150.280 146 213 7.6E-10 T 20-04-2016 APS56_RS05620 865cdb613175cc51e8b0de465dc180a1 289 Pfam PF12836 Helix-hairpin-helix motif 157 217 1.6E-12 T 20-04-2016 APS56_RS05620 865cdb613175cc51e8b0de465dc180a1 289 Pfam PF12836 Helix-hairpin-helix motif 224 286 6.2E-13 T 20-04-2016 APS56_RS03890 9903c9329942a0c11ab3e01252648f04 317 Pfam PF03631 Virulence factor BrkB 50 307 3.2E-48 T 20-04-2016 IPR017039 Virulence factor BrkB APS56_RS03890 9903c9329942a0c11ab3e01252648f04 317 PANTHER PTHR30213 55 307 1.6E-34 T 20-04-2016 APS56_RS03890 9903c9329942a0c11ab3e01252648f04 317 PIRSF PIRSF035875 33 317 4.7E-50 T 20-04-2016 IPR017039 Virulence factor BrkB APS56_RS03890 9903c9329942a0c11ab3e01252648f04 317 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 49 307 6.5E-21 T 20-04-2016 IPR017039 Virulence factor BrkB APS56_RS03890 9903c9329942a0c11ab3e01252648f04 317 PANTHER PTHR30213:SF1 55 307 1.6E-34 T 20-04-2016 APS56_RS03410 f7ef70110b4781e716da7c16cba72d62 130 SUPERFAMILY SSF54637 13 120 5.17E-22 T 20-04-2016 IPR029069 HotDog domain APS56_RS03410 f7ef70110b4781e716da7c16cba72d62 130 Pfam PF03061 Thioesterase superfamily 44 113 1.0E-5 T 20-04-2016 IPR006683 Thioesterase domain APS56_RS03410 f7ef70110b4781e716da7c16cba72d62 130 Gene3D G3DSA:3.10.129.10 4 128 6.9E-31 T 20-04-2016 IPR029069 HotDog domain APS56_RS00905 6936dca0e626d72e263a131a85eddc63 125 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 18 121 2.1E-33 T 20-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 APS56_RS00905 6936dca0e626d72e263a131a85eddc63 125 SUPERFAMILY SSF50022 17 124 9.82E-34 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APS56_RS00905 6936dca0e626d72e263a131a85eddc63 125 PANTHER PTHR21496 19 121 1.5E-15 T 20-04-2016 APS56_RS00905 6936dca0e626d72e263a131a85eddc63 125 Pfam PF13806 Rieske-like [2Fe-2S] domain 18 121 8.5E-27 T 20-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 APS56_RS00905 6936dca0e626d72e263a131a85eddc63 125 Gene3D G3DSA:2.102.10.10 17 123 1.8E-38 T 20-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 SUPERFAMILY SSF51905 4 311 1.81E-52 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 108 126 2.3E-35 T 20-04-2016 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 2.3E-35 T 20-04-2016 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 2.3E-35 T 20-04-2016 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 2.3E-35 T 20-04-2016 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 2.3E-35 T 20-04-2016 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 Gene3D G3DSA:3.50.50.60 129 245 8.4E-31 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 Gene3D G3DSA:3.50.50.60 8 128 1.0E-34 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PANTHER PTHR22912:SF48 1 314 3.7E-143 T 20-04-2016 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 311 2.0E-115 T 20-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 300 4.3E-45 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 42 57 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 292 311 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 133 145 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 109 117 4.7E-76 T 20-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APS56_RS15005 40c5deffbea8aca8d10400d60700a51c 326 PANTHER PTHR22912 1 314 3.7E-143 T 20-04-2016 APS56_RS16235 31c58afd01013633ca0f93a59ff4c152 137 Pfam PF14302 Domain of unknown function (DUF4377) 54 133 1.1E-20 T 20-04-2016 IPR025485 Domain of unknown function DUF4377 APS56_RS11970 efdacf55ef9d491efa9c39ec13dcfbe7 147 PANTHER PTHR33516 9 146 2.2E-39 T 20-04-2016 APS56_RS11970 efdacf55ef9d491efa9c39ec13dcfbe7 147 PANTHER PTHR33516:SF1 9 146 2.2E-39 T 20-04-2016 APS56_RS11970 efdacf55ef9d491efa9c39ec13dcfbe7 147 SUPERFAMILY SSF51306 28 144 3.14E-34 T 20-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APS56_RS11970 efdacf55ef9d491efa9c39ec13dcfbe7 147 Pfam PF00717 Peptidase S24-like 62 129 6.3E-12 T 20-04-2016 IPR019759 Peptidase S24/S26A/S26B APS56_RS11970 efdacf55ef9d491efa9c39ec13dcfbe7 147 Gene3D G3DSA:2.10.109.10 32 146 1.1E-44 T 20-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APS56_RS11970 efdacf55ef9d491efa9c39ec13dcfbe7 147 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 59 69 2.3E-8 T 20-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APS56_RS11970 efdacf55ef9d491efa9c39ec13dcfbe7 147 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 98 110 2.3E-8 T 20-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APS56_RS11970 efdacf55ef9d491efa9c39ec13dcfbe7 147 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 70 81 2.3E-8 T 20-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APS56_RS05305 c6a09809659d4cd57cf687721ed8f506 336 SUPERFAMILY SSF53448 184 245 2.7E-14 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05305 c6a09809659d4cd57cf687721ed8f506 336 SUPERFAMILY SSF53448 22 153 2.7E-14 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05305 c6a09809659d4cd57cf687721ed8f506 336 Gene3D G3DSA:3.90.550.10 22 142 1.1E-10 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05305 c6a09809659d4cd57cf687721ed8f506 336 Pfam PF00535 Glycosyl transferase family 2 39 157 1.1E-8 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS03850 c3d5a1717c614049b85f70819a380e33 254 TIGRFAM TIGR02757 TIGR02757: TIGR02757 family protein 22 250 3.8E-71 T 20-04-2016 IPR014127 Conserved hypothetical protein CHP02757 APS56_RS03850 c3d5a1717c614049b85f70819a380e33 254 Pfam PF09674 Protein of unknown function (DUF2400) 26 250 3.0E-89 T 20-04-2016 IPR014127 Conserved hypothetical protein CHP02757 APS56_RS10230 8838b5c0fd4466ed10649fdc21e3a6bb 119 Gene3D G3DSA:3.40.1350.10 11 117 1.8E-29 T 20-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APS56_RS10230 8838b5c0fd4466ed10649fdc21e3a6bb 119 PANTHER PTHR34039 1 119 7.8E-27 T 20-04-2016 APS56_RS10230 8838b5c0fd4466ed10649fdc21e3a6bb 119 PANTHER PTHR34039:SF1 1 119 7.8E-27 T 20-04-2016 APS56_RS10230 8838b5c0fd4466ed10649fdc21e3a6bb 119 SUPERFAMILY SSF52980 9 107 1.07E-25 T 20-04-2016 IPR011335 Restriction endonuclease type II-like APS56_RS10230 8838b5c0fd4466ed10649fdc21e3a6bb 119 Pfam PF02021 Uncharacterised protein family UPF0102 11 100 4.5E-24 T 20-04-2016 IPR003509 Uncharacterised protein family UPF0102 APS56_RS10230 8838b5c0fd4466ed10649fdc21e3a6bb 119 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 113 19.094 T 20-04-2016 IPR003509 Uncharacterised protein family UPF0102 APS56_RS09825 204a74762945c945bc53044c33bd85bc 460 SUPERFAMILY SSF53649 26 440 5.63E-133 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09825 204a74762945c945bc53044c33bd85bc 460 Pfam PF00884 Sulfatase 28 350 4.1E-81 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09825 204a74762945c945bc53044c33bd85bc 460 Gene3D G3DSA:3.40.720.10 25 366 2.4E-121 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09825 204a74762945c945bc53044c33bd85bc 460 PANTHER PTHR10342 3 442 1.1E-164 T 20-04-2016 APS56_RS09825 204a74762945c945bc53044c33bd85bc 460 Gene3D G3DSA:3.30.1120.10 367 440 2.2E-12 T 20-04-2016 APS56_RS09825 204a74762945c945bc53044c33bd85bc 460 ProSitePatterns PS00523 Sulfatases signature 1. 74 86 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09825 204a74762945c945bc53044c33bd85bc 460 PANTHER PTHR10342:SF199 3 442 1.1E-164 T 20-04-2016 APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 15 428 2.6E-152 T 20-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 Pfam PF07690 Major Facilitator Superfamily 26 382 5.5E-20 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 PANTHER PTHR23514:SF11 1 176 4.2E-177 T 20-04-2016 APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 PANTHER PTHR23514:SF11 195 428 4.2E-177 T 20-04-2016 APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 SUPERFAMILY SSF103473 8 431 4.58E-33 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 PANTHER PTHR23514 1 176 4.2E-177 T 20-04-2016 APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 PANTHER PTHR23514 195 428 4.2E-177 T 20-04-2016 APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 Gene3D G3DSA:1.20.1250.20 242 430 2.7E-5 T 20-04-2016 APS56_RS05880 1ccee740a2e9547595ddf049842b57b6 443 Gene3D G3DSA:1.20.1250.20 18 226 5.4E-15 T 20-04-2016 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 SUPERFAMILY SSF53649 23 380 2.04E-125 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 SUPERFAMILY SSF53649 409 452 2.04E-125 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 PANTHER PTHR10342 1 471 4.5E-152 T 20-04-2016 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 Gene3D G3DSA:3.40.720.10 22 340 1.1E-107 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 Pfam PF14707 C-terminal region of aryl-sulfatase 350 451 5.5E-13 T 20-04-2016 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 Gene3D G3DSA:3.30.1120.10 341 449 8.3E-17 T 20-04-2016 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 PANTHER PTHR10342:SF199 1 471 4.5E-152 T 20-04-2016 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 Pfam PF00884 Sulfatase 25 326 5.8E-73 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09725 989b3101603e279a9a6129e4f6d10e44 472 ProSitePatterns PS00523 Sulfatases signature 1. 71 83 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 PANTHER PTHR39425 195 298 1.1E-42 T 20-04-2016 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 PANTHER PTHR39425 319 389 1.1E-42 T 20-04-2016 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 Gene3D G3DSA:1.10.760.10 36 128 8.4E-18 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 Pfam PF00034 Cytochrome c 36 128 1.7E-11 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 Gene3D G3DSA:3.90.10.10 242 295 2.3E-8 T 20-04-2016 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 Gene3D G3DSA:3.90.10.10 335 431 9.9E-13 T 20-04-2016 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 SUPERFAMILY SSF46626 15 127 1.81E-21 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 PANTHER PTHR39425:SF1 195 298 1.1E-42 T 20-04-2016 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 PANTHER PTHR39425:SF1 319 389 1.1E-42 T 20-04-2016 APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 SUPERFAMILY SSF48695 209 408 2.73E-40 T 20-04-2016 IPR011031 Multihaem cytochrome APS56_RS12900 c9ed4d7f2e46878ef9e8b33b3270fed1 432 Pfam PF14522 Cytochrome c7 and related cytochrome c 345 432 9.4E-10 T 20-04-2016 APS56_RS00700 e369f075c4fc5349900e1af4d4d177c4 352 Pfam PF05893 Acyl-CoA reductase (LuxC) 53 233 4.4E-6 T 20-04-2016 IPR008670 Acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723|UniPathway: UPA00569 APS56_RS00700 e369f075c4fc5349900e1af4d4d177c4 352 SUPERFAMILY SSF53720 93 252 3.65E-8 T 20-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APS56_RS00700 e369f075c4fc5349900e1af4d4d177c4 352 Gene3D G3DSA:3.40.605.10 82 230 6.4E-4 T 20-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APS56_RS12325 1facb8ce2ddf32b22918a997dc2e1a59 214 Pfam PF14093 Domain of unknown function (DUF4271) 11 211 3.6E-40 T 20-04-2016 IPR025367 Protein of unknown function DUF4271 APS56_RS14830 46b1b4065b949b7a07510ae76ff38a86 553 SUPERFAMILY SSF52091 436 518 1.53E-8 T 20-04-2016 IPR002645 STAS domain APS56_RS14830 46b1b4065b949b7a07510ae76ff38a86 553 PANTHER PTHR11814 11 515 1.1E-137 T 20-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APS56_RS14830 46b1b4065b949b7a07510ae76ff38a86 553 Pfam PF00916 Sulfate permease family 13 396 4.8E-50 T 20-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APS56_RS14830 46b1b4065b949b7a07510ae76ff38a86 553 PANTHER PTHR11814:SF76 11 515 1.1E-137 T 20-04-2016 APS56_RS14830 46b1b4065b949b7a07510ae76ff38a86 553 Gene3D G3DSA:3.30.750.24 436 518 7.4E-6 T 20-04-2016 IPR002645 STAS domain APS56_RS02575 ce6b31e9f1b20a985e2574f54b1d9c23 125 Pfam PF13564 DoxX-like family 11 111 1.4E-23 T 20-04-2016 IPR032808 DoxX family APS56_RS02575 ce6b31e9f1b20a985e2574f54b1d9c23 125 PIRSF PIRSF030066 1 125 3.0E-46 T 20-04-2016 IPR016944 Uncharacterised conserved protein UCP030066 APS56_RS03720 4823e2cfd29b9f113cd905498d385b72 247 Pfam PF01791 DeoC/LacD family aldolase 8 174 8.4E-15 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APS56_RS03720 4823e2cfd29b9f113cd905498d385b72 247 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 29.978 T 20-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APS56_RS03720 4823e2cfd29b9f113cd905498d385b72 247 Gene3D G3DSA:3.20.20.70 2 204 8.5E-75 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS03720 4823e2cfd29b9f113cd905498d385b72 247 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 205 4.1E-73 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APS56_RS03720 4823e2cfd29b9f113cd905498d385b72 247 SMART SM01133 2 213 1.3E-67 T 20-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APS56_RS03720 4823e2cfd29b9f113cd905498d385b72 247 SUPERFAMILY SSF51569 1 204 4.29E-68 T 20-04-2016 APS56_RS03720 4823e2cfd29b9f113cd905498d385b72 247 PIRSF PIRSF001357 1 221 2.5E-65 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APS56_RS03720 4823e2cfd29b9f113cd905498d385b72 247 PANTHER PTHR10889 1 224 5.3E-85 T 20-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APS56_RS02250 1a9702140dad496511e6109dcb02968b 483 PANTHER PTHR13285:SF24 1 450 9.0E-117 T 20-04-2016 APS56_RS02250 1a9702140dad496511e6109dcb02968b 483 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 153 350 2.7E-28 T 20-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT APS56_RS02250 1a9702140dad496511e6109dcb02968b 483 PIRSF PIRSF016636 1 483 4.6E-143 T 20-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB APS56_RS02250 1a9702140dad496511e6109dcb02968b 483 PIRSF PIRSF500217 1 483 7.6E-145 T 20-04-2016 IPR028362 Alginate O-acetyltransferase AlgI GO:0042121 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00286 APS56_RS02250 1a9702140dad496511e6109dcb02968b 483 PANTHER PTHR13285 1 450 9.0E-117 T 20-04-2016 APS56_RS08905 5a8ff630f4ce249fa1c4bd90db4221a4 412 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 42 207 3.6E-44 T 20-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 APS56_RS08905 5a8ff630f4ce249fa1c4bd90db4221a4 412 PANTHER PTHR23417 129 139 1.6E-45 T 20-04-2016 APS56_RS08905 5a8ff630f4ce249fa1c4bd90db4221a4 412 PANTHER PTHR23417:SF2 45 110 1.6E-45 T 20-04-2016 APS56_RS08905 5a8ff630f4ce249fa1c4bd90db4221a4 412 PANTHER PTHR23417:SF2 190 409 1.6E-45 T 20-04-2016 APS56_RS08905 5a8ff630f4ce249fa1c4bd90db4221a4 412 PANTHER PTHR23417:SF2 129 139 1.6E-45 T 20-04-2016 APS56_RS08905 5a8ff630f4ce249fa1c4bd90db4221a4 412 PANTHER PTHR23417 45 110 1.6E-45 T 20-04-2016 APS56_RS08905 5a8ff630f4ce249fa1c4bd90db4221a4 412 PANTHER PTHR23417 190 409 1.6E-45 T 20-04-2016 APS56_RS10045 e7dffb199634bad2a2ddb469c1c83ce1 174 Pfam PF11188 Protein of unknown function (DUF2975) 58 174 1.0E-12 T 20-04-2016 IPR021354 Protein of unknown function DUF2975 APS56_RS05855 da605eda26b24db5197174f3f091449c 380 Pfam PF13202 EF hand 348 367 3.7E-7 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS05855 da605eda26b24db5197174f3f091449c 380 Pfam PF13202 EF hand 321 339 0.006 T 20-04-2016 IPR002048 EF-hand domain GO:0005509 APS56_RS05855 da605eda26b24db5197174f3f091449c 380 ProSitePatterns PS00018 EF-hand calcium-binding domain. 352 364 - T 20-04-2016 IPR018247 EF-Hand 1, calcium-binding site APS56_RS05855 da605eda26b24db5197174f3f091449c 380 Gene3D G3DSA:1.10.238.10 318 367 5.5E-7 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS05855 da605eda26b24db5197174f3f091449c 380 Pfam PF14240 YHYH protein 101 289 1.9E-52 T 20-04-2016 IPR025924 YHYH domain APS56_RS05855 da605eda26b24db5197174f3f091449c 380 SUPERFAMILY SSF47473 320 367 9.48E-9 T 20-04-2016 IPR011992 EF-hand domain pair APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 Gene3D G3DSA:3.30.1270.10 79 133 5.4E-34 T 20-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 Gene3D G3DSA:3.30.1270.10 209 235 5.4E-34 T 20-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 Gene3D G3DSA:3.30.70.980 134 200 1.2E-28 T 20-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 Pfam PF01709 Transcriptional regulator 5 234 9.9E-78 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 4.4E-76 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 SUPERFAMILY SSF75625 1 235 4.97E-80 T 20-04-2016 IPR029072 YebC-like APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 Gene3D G3DSA:1.10.10.200 1 78 1.5E-28 T 20-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 236 28.448 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APS56_RS03615 ecccfa1b4b23a46f319c5af86c05c830 239 PANTHER PTHR12532 1 238 5.4E-84 T 20-04-2016 IPR002876 Transcriptional regulator TACO1-like APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 Gene3D G3DSA:3.50.50.60 372 379 1.0E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 Gene3D G3DSA:3.50.50.60 14 294 1.0E-43 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 399 504 1.2E-18 T 20-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 31 5.2E-27 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 5.2E-27 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 48 60 5.2E-27 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 334 340 5.2E-27 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 93 105 5.2E-27 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 32 42 5.2E-27 T 20-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 Pfam PF01266 FAD dependent oxidoreductase 20 376 1.3E-42 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 SUPERFAMILY SSF54373 246 340 1.96E-7 T 20-04-2016 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 SUPERFAMILY SSF51905 12 123 6.48E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 SUPERFAMILY SSF51905 154 239 6.48E-35 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS04550 fce7446fb385100cf95f0822a5afcb09 526 PANTHER PTHR11985 18 516 1.5E-218 T 20-04-2016 APS56_RS03325 8da7ce4062f22593ac77e1c0a28feffb 97 Pfam PF05164 Cell division protein ZapA 7 90 2.0E-20 T 20-04-2016 IPR007838 Cell division protein ZapA-like APS56_RS03325 8da7ce4062f22593ac77e1c0a28feffb 97 Pfam PF05527 Domain of unknown function (DUF758) 39 96 1.2E-4 T 20-04-2016 IPR008477 Protein of unknown function DUF758 APS56_RS03325 8da7ce4062f22593ac77e1c0a28feffb 97 SUPERFAMILY SSF102829 7 94 2.09E-14 T 20-04-2016 IPR007838 Cell division protein ZapA-like APS56_RS12370 79fae60b20d934a3ae81984d25f65d1e 163 PANTHER PTHR35011 6 153 4.0E-27 T 20-04-2016 APS56_RS12370 79fae60b20d934a3ae81984d25f65d1e 163 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 155 1.5E-30 T 20-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component APS56_RS12370 79fae60b20d934a3ae81984d25f65d1e 163 PANTHER PTHR35011:SF2 6 153 4.0E-27 T 20-04-2016 APS56_RS13435 59a51e1793ee32228645404d450d484d 240 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 149 237 1.2E-26 T 20-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APS56_RS13435 59a51e1793ee32228645404d450d484d 240 PANTHER PTHR10516 57 77 1.1E-55 T 20-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APS56_RS13435 59a51e1793ee32228645404d450d484d 240 PANTHER PTHR10516 119 240 1.1E-55 T 20-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APS56_RS13435 59a51e1793ee32228645404d450d484d 240 SUPERFAMILY SSF54534 30 239 1.1E-54 T 20-04-2016 APS56_RS13435 59a51e1793ee32228645404d450d484d 240 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 21 141 1.8E-26 T 20-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APS56_RS13435 59a51e1793ee32228645404d450d484d 240 PANTHER PTHR10516:SF320 57 77 1.1E-55 T 20-04-2016 APS56_RS13435 59a51e1793ee32228645404d450d484d 240 PANTHER PTHR10516:SF320 119 240 1.1E-55 T 20-04-2016 APS56_RS13435 59a51e1793ee32228645404d450d484d 240 Gene3D G3DSA:3.10.50.40 125 239 1.2E-44 T 20-04-2016 APS56_RS13435 59a51e1793ee32228645404d450d484d 240 Gene3D G3DSA:1.10.287.460 25 124 2.0E-23 T 20-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 PIRSF PIRSF000726 1 439 1.2E-94 T 20-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 SUPERFAMILY SSF53633 1 289 6.81E-68 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 Pfam PF00696 Amino acid kinase family 2 275 8.0E-41 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 Gene3D G3DSA:3.40.1160.10 1 46 8.2E-58 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 Gene3D G3DSA:3.40.1160.10 103 291 8.2E-58 T 20-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 PANTHER PTHR21499 3 436 5.9E-120 T 20-04-2016 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 435 2.5E-88 T 20-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 20-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 PANTHER PTHR21499:SF3 3 436 5.9E-120 T 20-04-2016 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 SUPERFAMILY SSF55021 364 435 1.14E-8 T 20-04-2016 APS56_RS11760 45ac1332d7a74ca1e924f2b8c14ae70b 440 SUPERFAMILY SSF55021 295 381 6.49E-18 T 20-04-2016 APS56_RS01580 daed29bdfbb7166d7b9f00415fe5701d 198 PANTHER PTHR38764:SF1 2 195 9.1E-44 T 20-04-2016 APS56_RS01580 daed29bdfbb7166d7b9f00415fe5701d 198 Pfam PF04336 Protein of unknown function, DUF479 81 184 8.4E-35 T 20-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APS56_RS01580 daed29bdfbb7166d7b9f00415fe5701d 198 PANTHER PTHR38764 2 195 9.1E-44 T 20-04-2016 APS56_RS01580 daed29bdfbb7166d7b9f00415fe5701d 198 PIRSF PIRSF011489 1 195 2.2E-54 T 20-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APS56_RS16470 dc79a3642ead7462239581327581b9bd 127 Pfam PF08695 Cytochrome oxidase complex assembly protein 1 27 124 2.3E-5 T 20-04-2016 IPR014807 Cytochrome oxidase assembly protein 1 APS56_RS05435 b8d4a5f9def4dd84d47e30678ae12b45 73 Pfam PF11387 Protein of unknown function (DUF2795) 11 56 5.7E-17 T 20-04-2016 IPR021527 Protein of unknown function DUF2795 APS56_RS13585 fb78e25f45d1c5eb8bdb95101e59bda7 204 Pfam PF14014 Protein of unknown function (DUF4230) 40 185 2.9E-22 T 20-04-2016 IPR025324 Protein of unknown function DUF4230 APS56_RS14675 325c98e407f5aa7feb1e29a848a3f7fe 190 Pfam PF00027 Cyclic nucleotide-binding domain 30 116 6.3E-14 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS14675 325c98e407f5aa7feb1e29a848a3f7fe 190 PANTHER PTHR24567 12 190 1.4E-36 T 20-04-2016 APS56_RS14675 325c98e407f5aa7feb1e29a848a3f7fe 190 Gene3D G3DSA:2.60.120.10 4 153 1.4E-39 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS14675 325c98e407f5aa7feb1e29a848a3f7fe 190 SUPERFAMILY SSF51206 14 141 1.2E-25 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS14675 325c98e407f5aa7feb1e29a848a3f7fe 190 PANTHER PTHR24567:SF33 12 190 1.4E-36 T 20-04-2016 APS56_RS14675 325c98e407f5aa7feb1e29a848a3f7fe 190 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 36 52 - T 20-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site APS56_RS02835 694b944565a9f1090782e59c2d18017d 387 Gene3D G3DSA:1.10.3210.10 12 124 7.3E-19 T 20-04-2016 IPR006674 HD domain APS56_RS02835 694b944565a9f1090782e59c2d18017d 387 SUPERFAMILY SSF109604 6 191 2.8E-30 T 20-04-2016 APS56_RS02835 694b944565a9f1090782e59c2d18017d 387 Pfam PF01966 HD domain 29 125 7.7E-9 T 20-04-2016 IPR006674 HD domain APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 PANTHER PTHR10342 2 112 2.3E-142 T 20-04-2016 APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 PANTHER PTHR10342 130 483 2.3E-142 T 20-04-2016 APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 Gene3D G3DSA:3.30.1120.10 368 457 8.0E-22 T 20-04-2016 APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 ProSitePatterns PS00523 Sulfatases signature 1. 52 64 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 Pfam PF00884 Sulfatase 7 352 1.2E-68 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 ProSitePatterns PS00149 Sulfatases signature 2. 101 111 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 PANTHER PTHR10342:SF199 2 112 2.3E-142 T 20-04-2016 APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 PANTHER PTHR10342:SF199 130 483 2.3E-142 T 20-04-2016 APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 SUPERFAMILY SSF53649 6 457 8.14E-122 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 Gene3D G3DSA:3.40.720.10 4 367 3.1E-104 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09710 827fc59ce695e725144bc7d8ce5169ff 483 Pfam PF16385 Domain of unknown function 361 453 9.4E-12 T 20-04-2016 IPR032158 Domain of unknown function DUF4994 APS56_RS14260 023fe9d2b51f71e8b305e4d1f21163b9 214 Gene3D G3DSA:3.40.50.150 7 213 1.2E-67 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS14260 023fe9d2b51f71e8b305e4d1f21163b9 214 SUPERFAMILY SSF53335 7 213 1.55E-46 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS14260 023fe9d2b51f71e8b305e4d1f21163b9 214 PANTHER PTHR10509:SF14 8 214 9.3E-66 T 20-04-2016 APS56_RS14260 023fe9d2b51f71e8b305e4d1f21163b9 214 Pfam PF01596 O-methyltransferase 18 213 2.7E-48 T 20-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 APS56_RS14260 023fe9d2b51f71e8b305e4d1f21163b9 214 PANTHER PTHR10509 8 214 9.3E-66 T 20-04-2016 APS56_RS12920 dc433b0c218dc59a6fc03d7ae9965dc0 183 PANTHER PTHR40394 3 177 5.4E-24 T 20-04-2016 APS56_RS12920 dc433b0c218dc59a6fc03d7ae9965dc0 183 Gene3D G3DSA:1.10.760.10 7 23 1.8E-17 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS12920 dc433b0c218dc59a6fc03d7ae9965dc0 183 Gene3D G3DSA:1.10.760.10 89 178 1.8E-17 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS12920 dc433b0c218dc59a6fc03d7ae9965dc0 183 SUPERFAMILY SSF46626 83 178 2.96E-17 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS12920 dc433b0c218dc59a6fc03d7ae9965dc0 183 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 96 174 6.1E-13 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS12920 dc433b0c218dc59a6fc03d7ae9965dc0 183 PANTHER PTHR40394:SF2 3 177 5.4E-24 T 20-04-2016 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 Gene3D G3DSA:3.40.50.620 1 149 2.4E-47 T 20-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 149 6.2E-53 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 PANTHER PTHR21342:SF1 1 149 4.4E-60 T 20-04-2016 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 Pfam PF01467 Cytidylyltransferase-like 5 132 5.4E-15 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 151 29.305 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 SUPERFAMILY SSF52374 1 149 3.26E-38 T 20-04-2016 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 4.0E-41 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 4.0E-41 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 4.0E-41 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 4.0E-41 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 111 133 4.0E-41 T 20-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 56 1.5E-14 T 20-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APS56_RS14835 b7b28cf53a39f34e92b7af5fc2681106 151 PANTHER PTHR21342 1 149 4.4E-60 T 20-04-2016 APS56_RS16110 14762fbef5134b79550a02209db30a15 255 Pfam PF10728 Domain of unknown function (DUF2520) 123 245 6.7E-32 T 20-04-2016 IPR018931 Domain of unknown function DUF2520 APS56_RS16110 14762fbef5134b79550a02209db30a15 255 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 87 2.1E-4 T 20-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APS56_RS16110 14762fbef5134b79550a02209db30a15 255 SUPERFAMILY SSF48179 156 253 5.1E-25 T 20-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APS56_RS16110 14762fbef5134b79550a02209db30a15 255 Gene3D G3DSA:1.10.1040.20 154 249 4.3E-32 T 20-04-2016 IPR018931 Domain of unknown function DUF2520 APS56_RS16110 14762fbef5134b79550a02209db30a15 255 PANTHER PTHR40459:SF1 45 231 1.6E-15 T 20-04-2016 APS56_RS16110 14762fbef5134b79550a02209db30a15 255 Gene3D G3DSA:3.40.50.720 2 153 1.6E-25 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS16110 14762fbef5134b79550a02209db30a15 255 SUPERFAMILY SSF51735 4 154 4.62E-20 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS16110 14762fbef5134b79550a02209db30a15 255 PANTHER PTHR40459 45 231 1.6E-15 T 20-04-2016 APS56_RS05140 7c21e1b90403ae7d06fdc92b7d0628cd 187 PANTHER PTHR37833 4 131 2.7E-16 T 20-04-2016 APS56_RS05140 7c21e1b90403ae7d06fdc92b7d0628cd 187 PANTHER PTHR37833:SF1 4 131 2.7E-16 T 20-04-2016 APS56_RS05140 7c21e1b90403ae7d06fdc92b7d0628cd 187 Pfam PF07610 Protein of unknown function (DUF1573) 70 114 6.0E-20 T 20-04-2016 IPR011467 Protein of unknown function DUF1573 APS56_RS05140 7c21e1b90403ae7d06fdc92b7d0628cd 187 Gene3D G3DSA:2.60.40.360 45 143 2.1E-23 T 20-04-2016 IPR008962 PapD-like APS56_RS05560 785fd4b2ddcdda563768781d0574cfe9 65 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 58 11.978 T 20-04-2016 IPR022943 Preprotein translocase subunit SecE APS56_RS05560 785fd4b2ddcdda563768781d0574cfe9 65 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 4 60 1.9E-13 T 20-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APS56_RS05560 785fd4b2ddcdda563768781d0574cfe9 65 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 3.1E-18 T 20-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APS56_RS05560 785fd4b2ddcdda563768781d0574cfe9 65 Gene3D G3DSA:1.20.5.1030 2 58 7.1E-18 T 20-04-2016 APS56_RS16375 01362503b37bf41fb0489d6e728d7325 277 Pfam PF13525 Outer membrane lipoprotein 33 216 1.8E-19 T 20-04-2016 APS56_RS16375 01362503b37bf41fb0489d6e728d7325 277 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 2 214 4.4E-34 T 20-04-2016 IPR017689 Outer membrane protein assembly factor BamD APS56_RS16375 01362503b37bf41fb0489d6e728d7325 277 Gene3D G3DSA:1.25.40.10 18 268 2.9E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS16375 01362503b37bf41fb0489d6e728d7325 277 SUPERFAMILY SSF48452 24 102 4.24E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS01880 b706ba46a5ebec205430db8af61e4061 422 Gene3D G3DSA:2.30.30.60 215 264 1.1E-9 T 20-04-2016 APS56_RS01880 b706ba46a5ebec205430db8af61e4061 422 Pfam PF00924 Mechanosensitive ion channel 157 410 1.0E-39 T 20-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APS56_RS01880 b706ba46a5ebec205430db8af61e4061 422 PANTHER PTHR30414 7 415 6.5E-139 T 20-04-2016 APS56_RS01880 b706ba46a5ebec205430db8af61e4061 422 SUPERFAMILY SSF50182 197 264 2.42E-11 T 20-04-2016 IPR010920 LSM domain APS56_RS01880 b706ba46a5ebec205430db8af61e4061 422 PANTHER PTHR30414:SF0 7 415 6.5E-139 T 20-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 APS56_RS11650 5ea3c77788ad79723814183f8c1979e9 322 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 66 269 2.1E-7 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11650 5ea3c77788ad79723814183f8c1979e9 322 Gene3D G3DSA:3.60.10.10 73 320 2.3E-16 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11650 5ea3c77788ad79723814183f8c1979e9 322 SUPERFAMILY SSF56219 16 321 3.01E-30 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 Gene3D G3DSA:3.30.9.10 287 298 4.4E-4 T 20-04-2016 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 Gene3D G3DSA:3.30.9.10 136 188 4.4E-4 T 20-04-2016 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 Pfam PF01266 FAD dependent oxidoreductase 5 395 9.8E-50 T 20-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 SUPERFAMILY SSF54373 270 355 2.62E-6 T 20-04-2016 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 Gene3D G3DSA:3.50.50.60 109 131 6.9E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 Gene3D G3DSA:3.50.50.60 3 59 6.9E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 Gene3D G3DSA:3.50.50.60 189 267 6.9E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 Gene3D G3DSA:3.50.50.60 357 413 6.9E-50 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 SUPERFAMILY SSF51905 3 55 1.49E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 SUPERFAMILY SSF51905 108 268 1.49E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 SUPERFAMILY SSF51905 357 414 1.49E-42 T 20-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 PANTHER PTHR13847 4 61 4.6E-47 T 20-04-2016 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 PANTHER PTHR13847 108 413 4.6E-47 T 20-04-2016 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 PANTHER PTHR13847:SF180 4 61 4.6E-47 T 20-04-2016 APS56_RS08970 2015ce18b7fb7436520c6cc233f47d0c 415 PANTHER PTHR13847:SF180 108 413 4.6E-47 T 20-04-2016 APS56_RS07920 69599ecbadeb7c11c0369199c29242ed 330 SUPERFAMILY SSF53822 87 329 8.48E-14 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS07920 69599ecbadeb7c11c0369199c29242ed 330 Gene3D G3DSA:3.40.50.2300 252 329 3.1E-7 T 20-04-2016 APS56_RS07920 69599ecbadeb7c11c0369199c29242ed 330 PANTHER PTHR38445 1 282 6.3E-20 T 20-04-2016 APS56_RS07920 69599ecbadeb7c11c0369199c29242ed 330 Gene3D G3DSA:1.10.10.10 2 76 1.6E-21 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07920 69599ecbadeb7c11c0369199c29242ed 330 SUPERFAMILY SSF46785 9 79 6.81E-16 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07920 69599ecbadeb7c11c0369199c29242ed 330 PANTHER PTHR38445:SF1 1 282 6.3E-20 T 20-04-2016 APS56_RS07920 69599ecbadeb7c11c0369199c29242ed 330 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.9E-13 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS07920 69599ecbadeb7c11c0369199c29242ed 330 SMART SM00345 16 75 1.4E-10 T 20-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APS56_RS00595 02d87be260fee6f8d11c8f06215fb7b0 451 Pfam PF00202 Aminotransferase class-III 56 447 2.0E-81 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS00595 02d87be260fee6f8d11c8f06215fb7b0 451 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 263 300 - T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS00595 02d87be260fee6f8d11c8f06215fb7b0 451 PANTHER PTHR11986 57 447 4.5E-113 T 20-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APS56_RS00595 02d87be260fee6f8d11c8f06215fb7b0 451 Gene3D G3DSA:3.40.640.10 89 335 1.6E-59 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS00595 02d87be260fee6f8d11c8f06215fb7b0 451 SUPERFAMILY SSF53383 57 447 5.69E-95 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS00595 02d87be260fee6f8d11c8f06215fb7b0 451 Gene3D G3DSA:3.90.1150.10 336 449 3.8E-31 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS05845 683c7c4834bca8f047cc04c19462232c 474 Pfam PF08757 CotH protein 136 467 5.1E-69 T 20-04-2016 IPR014867 Spore coat protein CotH APS56_RS05845 683c7c4834bca8f047cc04c19462232c 474 PANTHER PTHR40050:SF2 149 377 1.1E-17 T 20-04-2016 APS56_RS05845 683c7c4834bca8f047cc04c19462232c 474 PANTHER PTHR40050 149 377 1.1E-17 T 20-04-2016 APS56_RS01590 311e9d4facd31ce2b49c65b6d8a8c32c 294 PIRSF PIRSF026649 1 294 1.1E-59 T 20-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APS56_RS01590 311e9d4facd31ce2b49c65b6d8a8c32c 294 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 8 286 2.2E-31 T 20-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APS56_RS01590 311e9d4facd31ce2b49c65b6d8a8c32c 294 PANTHER PTHR30606:SF2 1 288 1.2E-39 T 20-04-2016 APS56_RS01590 311e9d4facd31ce2b49c65b6d8a8c32c 294 PANTHER PTHR30606 1 288 1.2E-39 T 20-04-2016 APS56_RS03765 450ad30c669b5dd36ad70c791adf5903 246 PANTHER PTHR30269:SF0 1 245 1.4E-31 T 20-04-2016 APS56_RS03765 450ad30c669b5dd36ad70c791adf5903 246 Pfam PF01925 Sulfite exporter TauE/SafE 13 243 2.0E-33 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APS56_RS03765 450ad30c669b5dd36ad70c791adf5903 246 PANTHER PTHR30269 1 245 1.4E-31 T 20-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APS56_RS04995 9c3e944e0d2d2d722d31bb67a4f63c40 205 PANTHER PTHR10108:SF838 2 185 2.5E-33 T 20-04-2016 APS56_RS04995 9c3e944e0d2d2d722d31bb67a4f63c40 205 PANTHER PTHR10108 2 185 2.5E-33 T 20-04-2016 APS56_RS04995 9c3e944e0d2d2d722d31bb67a4f63c40 205 Gene3D G3DSA:3.40.50.150 2 203 5.9E-23 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS04995 9c3e944e0d2d2d722d31bb67a4f63c40 205 SUPERFAMILY SSF53335 3 177 1.76E-22 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS04995 9c3e944e0d2d2d722d31bb67a4f63c40 205 Pfam PF13649 Methyltransferase domain 43 129 3.0E-10 T 20-04-2016 APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 PANTHER PTHR23150 251 283 7.8E-39 T 20-04-2016 APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 PANTHER PTHR23150 41 143 7.8E-39 T 20-04-2016 APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 PANTHER PTHR23150 300 444 7.8E-39 T 20-04-2016 APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 Pfam PF03781 Sulfatase-modifying factor enzyme 1 41 441 1.2E-50 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 SUPERFAMILY SSF56436 38 90 2.64E-65 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 SUPERFAMILY SSF56436 219 443 2.64E-65 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 Gene3D G3DSA:3.90.1580.10 31 92 4.9E-90 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 Gene3D G3DSA:3.90.1580.10 213 445 4.9E-90 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS07190 f29cb131a6c6d0ecbaddd58549188374 454 TIGRFAM TIGR03525 GldK: gliding motility-associated lipoprotein GldK 1 449 3.5E-253 T 20-04-2016 IPR019866 Gliding motility-associated lipoprotein GldK APS56_RS11775 daf2ced7ebf8112c5f1b2b669558ae83 186 Pfam PF02627 Carboxymuconolactone decarboxylase family 50 101 4.8E-9 T 20-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS11775 daf2ced7ebf8112c5f1b2b669558ae83 186 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 58 100 6.5E-11 T 20-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS11775 daf2ced7ebf8112c5f1b2b669558ae83 186 PANTHER PTHR35446 3 172 1.8E-30 T 20-04-2016 APS56_RS11775 daf2ced7ebf8112c5f1b2b669558ae83 186 PANTHER PTHR35446:SF1 3 172 1.8E-30 T 20-04-2016 APS56_RS11775 daf2ced7ebf8112c5f1b2b669558ae83 186 SUPERFAMILY SSF69118 2 175 5.4E-44 T 20-04-2016 IPR029032 AhpD-like APS56_RS11775 daf2ced7ebf8112c5f1b2b669558ae83 186 Gene3D G3DSA:1.20.1290.10 3 89 9.7E-35 T 20-04-2016 IPR029032 AhpD-like APS56_RS11775 daf2ced7ebf8112c5f1b2b669558ae83 186 Gene3D G3DSA:1.20.1290.10 138 177 9.7E-35 T 20-04-2016 IPR029032 AhpD-like APS56_RS13600 83fbf5522c0bce07908c85168aa55edb 183 Pfam PF13590 Domain of unknown function (DUF4136) 25 179 3.4E-37 T 20-04-2016 IPR025411 Domain of unknown function DUF4136 APS56_RS15415 4e594cf1262bcbb51a45399d08ba3632 258 PANTHER PTHR11532 1 110 3.7E-19 T 20-04-2016 APS56_RS15415 4e594cf1262bcbb51a45399d08ba3632 258 PANTHER PTHR11532:SF57 1 110 3.7E-19 T 20-04-2016 APS56_RS15415 4e594cf1262bcbb51a45399d08ba3632 258 Pfam PF13715 CarboxypepD_reg-like domain 25 110 1.1E-15 T 20-04-2016 APS56_RS15415 4e594cf1262bcbb51a45399d08ba3632 258 SUPERFAMILY SSF49464 24 108 7.06E-13 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS15415 4e594cf1262bcbb51a45399d08ba3632 258 Gene3D G3DSA:2.60.40.1120 24 86 7.7E-8 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS11125 70388d5524c34d0d83de624ecdb93ae6 346 Gene3D G3DSA:3.60.10.10 173 342 9.8E-19 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11125 70388d5524c34d0d83de624ecdb93ae6 346 Gene3D G3DSA:3.60.10.10 24 138 9.8E-19 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11125 70388d5524c34d0d83de624ecdb93ae6 346 SUPERFAMILY SSF56219 179 344 4.46E-22 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11125 70388d5524c34d0d83de624ecdb93ae6 346 SUPERFAMILY SSF56219 21 146 4.46E-22 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11125 70388d5524c34d0d83de624ecdb93ae6 346 PANTHER PTHR41349 3 342 2.4E-42 T 20-04-2016 APS56_RS14945 96d3800724f781eb7608e5198c44805e 260 Gene3D G3DSA:3.20.20.70 1 257 4.3E-88 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS14945 96d3800724f781eb7608e5198c44805e 260 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 257 30.964 T 20-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APS56_RS14945 96d3800724f781eb7608e5198c44805e 260 PANTHER PTHR22854 1 260 1.2E-84 T 20-04-2016 APS56_RS14945 96d3800724f781eb7608e5198c44805e 260 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 254 6.1E-78 T 20-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APS56_RS14945 96d3800724f781eb7608e5198c44805e 260 PANTHER PTHR22854:SF2 1 260 1.2E-84 T 20-04-2016 APS56_RS14945 96d3800724f781eb7608e5198c44805e 260 SUPERFAMILY SSF51366 1 256 6.31E-77 T 20-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APS56_RS11130 0a1e0b51554fe0435cb9883fe95c164d 404 Pfam PF12704 MacB-like periplasmic core domain 25 246 4.7E-9 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APS56_RS11130 0a1e0b51554fe0435cb9883fe95c164d 404 PANTHER PTHR30489 4 403 2.9E-30 T 20-04-2016 APS56_RS11130 0a1e0b51554fe0435cb9883fe95c164d 404 Pfam PF02687 FtsX-like permease family 277 398 3.5E-10 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 9 441 1.9E-204 T 20-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 Hamap MF_00455 Xylose isomerase [xylA]. 16 441 50.733 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 Gene3D G3DSA:3.20.20.150 7 441 1.3E-197 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 SUPERFAMILY SSF51658 8 441 1.49E-160 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 234 258 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 305 316 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 138 158 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 338 349 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 212 231 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 97 119 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 276 303 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 185 206 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PRINTS PR00688 Xylose isomerase signature 161 180 4.5E-75 T 20-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PANTHER PTHR32176 6 441 3.5E-245 T 20-04-2016 APS56_RS12390 4c945778ee084e2be9ff28102f06f9f5 441 PANTHER PTHR32176:SF0 6 441 3.5E-245 T 20-04-2016 APS56_RS03530 47d6edbd0761b086884ecdf6395f3f7c 337 PANTHER PTHR11732 22 337 5.4E-166 T 20-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APS56_RS03530 47d6edbd0761b086884ecdf6395f3f7c 337 PANTHER PTHR11732:SF191 22 337 5.4E-166 T 20-04-2016 APS56_RS03530 47d6edbd0761b086884ecdf6395f3f7c 337 SUPERFAMILY SSF51430 22 335 3.4E-90 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS03530 47d6edbd0761b086884ecdf6395f3f7c 337 Gene3D G3DSA:3.20.20.100 22 335 1.2E-87 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS03530 47d6edbd0761b086884ecdf6395f3f7c 337 Pfam PF00248 Aldo/keto reductase family 37 336 3.7E-71 T 20-04-2016 IPR023210 NADP-dependent oxidoreductase domain APS56_RS09930 a09aa3fce633becf31923ecaaa649421 450 PANTHER PTHR10342 3 442 2.1E-119 T 20-04-2016 APS56_RS09930 a09aa3fce633becf31923ecaaa649421 450 Gene3D G3DSA:3.30.1120.10 388 442 5.9E-13 T 20-04-2016 APS56_RS09930 a09aa3fce633becf31923ecaaa649421 450 SUPERFAMILY SSF53649 22 442 1.1E-107 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09930 a09aa3fce633becf31923ecaaa649421 450 Pfam PF00884 Sulfatase 24 359 4.9E-61 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09930 a09aa3fce633becf31923ecaaa649421 450 PANTHER PTHR10342:SF207 3 442 2.1E-119 T 20-04-2016 APS56_RS09930 a09aa3fce633becf31923ecaaa649421 450 Gene3D G3DSA:3.40.720.10 21 378 3.0E-91 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09930 a09aa3fce633becf31923ecaaa649421 450 Pfam PF16347 Domain of unknown function (DUF4976) 392 445 1.2E-7 T 20-04-2016 IPR032506 Domain of unknown function DUF4976 APS56_RS09065 504dd7bd519368de1adbdb77e495ce14 370 PANTHER PTHR10977:SF3 6 341 1.9E-45 T 20-04-2016 APS56_RS09065 504dd7bd519368de1adbdb77e495ce14 370 PANTHER PTHR10977 6 341 1.9E-45 T 20-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 APS56_RS09065 504dd7bd519368de1adbdb77e495ce14 370 SUPERFAMILY SSF55060 217 346 7.19E-24 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS09065 504dd7bd519368de1adbdb77e495ce14 370 Gene3D G3DSA:3.30.70.890 209 365 3.0E-39 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS09065 504dd7bd519368de1adbdb77e495ce14 370 Gene3D G3DSA:3.30.230.10 19 208 2.9E-53 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS09065 504dd7bd519368de1adbdb77e495ce14 370 PIRSF PIRSF015950 13 370 1.2E-68 T 20-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 APS56_RS09065 504dd7bd519368de1adbdb77e495ce14 370 SUPERFAMILY SSF54211 19 190 4.02E-20 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS06065 b5070ea3bfe0052b8af74cb6f87a314f 214 Gene3D G3DSA:3.40.50.1110 3 207 8.2E-48 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS06065 b5070ea3bfe0052b8af74cb6f87a314f 214 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 197 8.7E-27 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS06065 b5070ea3bfe0052b8af74cb6f87a314f 214 PANTHER PTHR30383 1 211 2.3E-28 T 20-04-2016 APS56_RS06065 b5070ea3bfe0052b8af74cb6f87a314f 214 SUPERFAMILY SSF52266 10 211 1.68E-47 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 Gene3D G3DSA:3.30.70.141 2 137 3.9E-53 T 20-04-2016 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 PANTHER PTHR11349 5 128 2.4E-56 T 20-04-2016 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 30.399 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 SUPERFAMILY SSF54919 1 138 2.49E-51 T 20-04-2016 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 6.4E-31 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 6.4E-31 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 6.4E-31 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 6.4E-31 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 6.4E-31 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.4E-49 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS14400 3fdb76b5e7ae61896b84d12a4ab2ed03 139 SMART SM00562 3 137 2.6E-64 T 20-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 PANTHER PTHR11596 260 579 1.1E-67 T 20-04-2016 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 PANTHER PTHR11596:SF5 260 579 1.1E-67 T 20-04-2016 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 Gene3D G3DSA:3.20.20.190 26 227 4.1E-6 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 PRINTS PR00113 Alkaline phosphatase signature 260 280 3.3E-17 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 PRINTS PR00113 Alkaline phosphatase signature 344 364 3.3E-17 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 PRINTS PR00113 Alkaline phosphatase signature 445 474 3.3E-17 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 SMART SM00098 261 580 9.7E-17 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 SUPERFAMILY SSF51695 10 229 8.63E-20 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 Pfam PF00245 Alkaline phosphatase 538 578 2.8E-7 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 Pfam PF00245 Alkaline phosphatase 261 519 1.1E-45 T 20-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 SUPERFAMILY SSF53649 230 579 3.66E-92 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS00580 c0e1bc44d976928eb2c6dc302a365757 580 Gene3D G3DSA:3.40.720.10 246 579 1.5E-85 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS12205 68af3cdbdf56694357c4e2e3e0c4aed2 121 Pfam PF10677 Protein of unknown function (DUF2490) 2 101 1.5E-11 T 20-04-2016 IPR019619 Protein of unknown function DUF2490 APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 Gene3D G3DSA:3.40.50.720 2 250 6.3E-82 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 249 1.3E-65 T 20-04-2016 APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PANTHER PTHR24322 11 140 8.1E-49 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PANTHER PTHR24322 157 193 8.1E-49 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 7.0E-43 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.0E-43 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.0E-43 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.0E-43 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 7.0E-43 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.0E-43 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 SUPERFAMILY SSF51735 5 250 1.57E-80 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.1E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.1E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS15175 77e18053c61a9ae884c5d8f22216bf23 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.1E-10 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS00095 03d91c8b6a063784b4636a44e07aef15 304 Pfam PF01734 Patatin-like phospholipase 4 195 1.8E-15 T 20-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APS56_RS00095 03d91c8b6a063784b4636a44e07aef15 304 SUPERFAMILY SSF52151 2 291 2.04E-31 T 20-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APS56_RS00095 03d91c8b6a063784b4636a44e07aef15 304 Gene3D G3DSA:3.40.1090.10 2 196 4.3E-9 T 20-04-2016 APS56_RS13615 1c5fb632079938666e391c9a342dae85 271 Pfam PF01476 LysM domain 229 270 4.1E-14 T 20-04-2016 IPR018392 LysM domain APS56_RS13615 1c5fb632079938666e391c9a342dae85 271 SUPERFAMILY SSF54106 228 270 9.94E-11 T 20-04-2016 IPR018392 LysM domain APS56_RS13615 1c5fb632079938666e391c9a342dae85 271 SMART SM00257 228 271 8.1E-14 T 20-04-2016 IPR018392 LysM domain APS56_RS13615 1c5fb632079938666e391c9a342dae85 271 Gene3D G3DSA:3.10.350.10 228 270 5.0E-16 T 20-04-2016 IPR018392 LysM domain APS56_RS13615 1c5fb632079938666e391c9a342dae85 271 SMART SM00047 51 198 1.6E-33 T 20-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APS56_RS13615 1c5fb632079938666e391c9a342dae85 271 PANTHER PTHR33308:SF3 58 199 2.1E-19 T 20-04-2016 APS56_RS13615 1c5fb632079938666e391c9a342dae85 271 PANTHER PTHR33308 58 199 2.1E-19 T 20-04-2016 APS56_RS13615 1c5fb632079938666e391c9a342dae85 271 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 67 194 2.3E-22 T 20-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APS56_RS06100 536cd3851b9c10fa26b489dbe372c76c 105 Gene3D G3DSA:3.20.20.80 55 102 6.8E-5 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS06695 0d0b36b7185aaf1a45e20fc92f64f22a 489 PANTHER PTHR20992 9 307 7.7E-60 T 20-04-2016 APS56_RS06695 0d0b36b7185aaf1a45e20fc92f64f22a 489 PANTHER PTHR20992:SF9 9 307 7.7E-60 T 20-04-2016 APS56_RS06695 0d0b36b7185aaf1a45e20fc92f64f22a 489 Pfam PF04087 Domain of unknown function (DUF389) 99 235 1.1E-38 T 20-04-2016 IPR005240 Protein of unknown function DUF389 APS56_RS12215 f8a9974f6e60ed4deae10a19b2d2d79f 205 SUPERFAMILY SSF52833 57 151 1.34E-8 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS12215 f8a9974f6e60ed4deae10a19b2d2d79f 205 Gene3D G3DSA:3.40.30.10 4 198 8.8E-51 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS12215 f8a9974f6e60ed4deae10a19b2d2d79f 205 Pfam PF14595 Thioredoxin 36 161 3.4E-41 T 20-04-2016 APS56_RS01055 b8a70fc5032fdcff780ec1c21460d776 344 PANTHER PTHR31270 29 342 8.7E-83 T 20-04-2016 APS56_RS01055 b8a70fc5032fdcff780ec1c21460d776 344 Pfam PF05096 Glutamine cyclotransferase 106 341 1.1E-85 T 20-04-2016 IPR007788 Glutamine cyclotransferase APS56_RS01055 b8a70fc5032fdcff780ec1c21460d776 344 Gene3D G3DSA:2.130.10.10 57 331 6.2E-9 T 20-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APS56_RS01055 b8a70fc5032fdcff780ec1c21460d776 344 PANTHER PTHR31270:SF0 29 342 8.7E-83 T 20-04-2016 APS56_RS01055 b8a70fc5032fdcff780ec1c21460d776 344 SUPERFAMILY SSF50969 116 336 1.8E-16 T 20-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like APS56_RS12000 0fa243bd8a9c0a7cfce6c31ba448bc15 242 Gene3D G3DSA:2.60.40.10 32 105 5.6E-4 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS12000 0fa243bd8a9c0a7cfce6c31ba448bc15 242 SUPERFAMILY SSF81296 22 107 2.4E-5 T 20-04-2016 IPR014756 Immunoglobulin E-set APS56_RS09965 2ebf4416cae8d5f0f58747967f33b4ba 428 Pfam PF17166 Domain of unknown function (DUF5126) 126 229 1.7E-23 T 20-04-2016 IPR033431 Domain of unknown function DUF5126 APS56_RS09965 2ebf4416cae8d5f0f58747967f33b4ba 428 Pfam PF16391 Domain of unknown function 254 423 5.0E-24 T 20-04-2016 IPR032164 Domain of unknown function DUF5000 APS56_RS09965 2ebf4416cae8d5f0f58747967f33b4ba 428 Pfam PF16323 Domain of unknown function (DUF4959) 20 125 5.1E-28 T 20-04-2016 IPR032527 Domain of unknown function DUF4959 APS56_RS09475 64acf7973f026d0a16b77d099b133dff 308 PANTHER PTHR30573 1 307 1.1E-150 T 20-04-2016 APS56_RS09475 64acf7973f026d0a16b77d099b133dff 308 Pfam PF02445 Quinolinate synthetase A protein 5 305 7.3E-120 T 20-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APS56_RS09475 64acf7973f026d0a16b77d099b133dff 308 SUPERFAMILY SSF142754 2 306 1.96E-119 T 20-04-2016 APS56_RS09475 64acf7973f026d0a16b77d099b133dff 308 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 2 307 1.1E-123 T 20-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APS56_RS09475 64acf7973f026d0a16b77d099b133dff 308 Hamap MF_00568 Quinolinate synthase A [nadA]. 1 306 44.898 T 20-04-2016 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APS56_RS05870 15fe3746749d713b3f9861ba5696dd26 225 Pfam PF02630 SCO1/SenC 62 201 6.9E-15 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC APS56_RS05870 15fe3746749d713b3f9861ba5696dd26 225 PANTHER PTHR12151:SF10 35 211 1.2E-30 T 20-04-2016 APS56_RS05870 15fe3746749d713b3f9861ba5696dd26 225 Gene3D G3DSA:3.40.30.10 55 220 1.1E-37 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05870 15fe3746749d713b3f9861ba5696dd26 225 Gene3D G3DSA:3.40.30.10 5 16 1.1E-37 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05870 15fe3746749d713b3f9861ba5696dd26 225 SUPERFAMILY SSF52833 60 217 4.31E-32 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05870 15fe3746749d713b3f9861ba5696dd26 225 PANTHER PTHR12151 35 211 1.2E-30 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC APS56_RS08800 7586e7f9c6702d476ea246617da290a4 834 PANTHER PTHR11532:SF57 1 107 2.5E-19 T 20-04-2016 APS56_RS08800 7586e7f9c6702d476ea246617da290a4 834 Pfam PF13715 CarboxypepD_reg-like domain 23 105 2.9E-17 T 20-04-2016 APS56_RS08800 7586e7f9c6702d476ea246617da290a4 834 Gene3D G3DSA:2.60.40.1120 23 115 3.0E-12 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS08800 7586e7f9c6702d476ea246617da290a4 834 PANTHER PTHR11532 1 107 2.5E-19 T 20-04-2016 APS56_RS08800 7586e7f9c6702d476ea246617da290a4 834 SUPERFAMILY SSF49464 21 104 6.67E-13 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS14005 f30bdc4429d4affee8bee85ee2939d93 183 SUPERFAMILY SSF55282 6 181 5.65E-72 T 20-04-2016 IPR022803 Ribosomal protein L5 domain APS56_RS14005 f30bdc4429d4affee8bee85ee2939d93 183 PANTHER PTHR11994 6 183 1.4E-82 T 20-04-2016 APS56_RS14005 f30bdc4429d4affee8bee85ee2939d93 183 PANTHER PTHR11994:SF4 6 183 1.4E-82 T 20-04-2016 APS56_RS14005 f30bdc4429d4affee8bee85ee2939d93 183 Pfam PF00673 ribosomal L5P family C-terminus 87 180 2.3E-40 T 20-04-2016 IPR031309 Ribosomal protein L5, C-terminal APS56_RS14005 f30bdc4429d4affee8bee85ee2939d93 183 PIRSF PIRSF002161 1 183 4.0E-66 T 20-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 APS56_RS14005 f30bdc4429d4affee8bee85ee2939d93 183 Pfam PF00281 Ribosomal protein L5 27 83 1.2E-24 T 20-04-2016 IPR031310 Ribosomal protein L5, N-terminal APS56_RS14005 f30bdc4429d4affee8bee85ee2939d93 183 Gene3D G3DSA:3.30.1440.10 5 182 1.7E-73 T 20-04-2016 IPR022803 Ribosomal protein L5 domain APS56_RS14005 f30bdc4429d4affee8bee85ee2939d93 183 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 4 182 42.034 T 20-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS13040 9b04214df9f7fb4e43b7de864f33b200 247 PANTHER PTHR12151 44 202 3.6E-32 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC APS56_RS13040 9b04214df9f7fb4e43b7de864f33b200 247 Gene3D G3DSA:3.40.30.10 9 21 1.6E-50 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS13040 9b04214df9f7fb4e43b7de864f33b200 247 Gene3D G3DSA:3.40.30.10 61 246 1.6E-50 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS13040 9b04214df9f7fb4e43b7de864f33b200 247 Pfam PF02630 SCO1/SenC 63 201 1.6E-21 T 20-04-2016 IPR003782 Copper chaperone SCO1/SenC APS56_RS13040 9b04214df9f7fb4e43b7de864f33b200 247 SUPERFAMILY SSF52833 64 211 3.09E-41 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS12315 d3fbdd69d765eb7c95239856b3909f86 127 PANTHER PTHR10584 6 67 1.7E-13 T 20-04-2016 APS56_RS12315 d3fbdd69d765eb7c95239856b3909f86 127 PANTHER PTHR10584:SF191 6 67 1.7E-13 T 20-04-2016 APS56_RS12315 d3fbdd69d765eb7c95239856b3909f86 127 Pfam PF04241 Protein of unknown function (DUF423) 20 110 8.4E-24 T 20-04-2016 IPR006696 Protein of unknown function DUF423 APS56_RS15865 80e0bf1847aee573c715b4d0d59af0bf 154 SUPERFAMILY SSF55961 4 148 5.07E-21 T 20-04-2016 APS56_RS09740 ebbc3b75ceaff7c6c9b9fdb4b8efe845 340 Gene3D G3DSA:2.115.10.20 51 216 4.7E-21 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09740 ebbc3b75ceaff7c6c9b9fdb4b8efe845 340 Pfam PF04616 Glycosyl hydrolases family 43 57 215 4.5E-12 T 20-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APS56_RS09740 ebbc3b75ceaff7c6c9b9fdb4b8efe845 340 SUPERFAMILY SSF75005 55 270 4.92E-30 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS05260 c0f46a6488423c803f50e6684d8c3529 379 SUPERFAMILY SSF53756 17 378 2.24E-63 T 20-04-2016 APS56_RS05260 c0f46a6488423c803f50e6684d8c3529 379 PANTHER PTHR12526 1 379 2.9E-49 T 20-04-2016 APS56_RS05260 c0f46a6488423c803f50e6684d8c3529 379 Pfam PF13439 Glycosyltransferase Family 4 19 181 1.1E-20 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS05260 c0f46a6488423c803f50e6684d8c3529 379 Gene3D G3DSA:3.40.50.2000 171 355 1.0E-15 T 20-04-2016 APS56_RS05260 c0f46a6488423c803f50e6684d8c3529 379 Pfam PF00534 Glycosyl transferases group 1 188 355 2.0E-25 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS03990 7c1b091e21cd7b3b244ff95d8272f6fd 664 Pfam PF03993 Domain of Unknown Function (DUF349) 319 395 8.3E-16 T 20-04-2016 IPR007139 Protein of unknown function DUF349 APS56_RS03990 7c1b091e21cd7b3b244ff95d8272f6fd 664 Pfam PF03993 Domain of Unknown Function (DUF349) 478 550 8.0E-15 T 20-04-2016 IPR007139 Protein of unknown function DUF349 APS56_RS03990 7c1b091e21cd7b3b244ff95d8272f6fd 664 Pfam PF03993 Domain of Unknown Function (DUF349) 164 237 3.9E-18 T 20-04-2016 IPR007139 Protein of unknown function DUF349 APS56_RS03990 7c1b091e21cd7b3b244ff95d8272f6fd 664 Pfam PF03993 Domain of Unknown Function (DUF349) 243 314 5.0E-12 T 20-04-2016 IPR007139 Protein of unknown function DUF349 APS56_RS03990 7c1b091e21cd7b3b244ff95d8272f6fd 664 Pfam PF03993 Domain of Unknown Function (DUF349) 402 474 1.7E-16 T 20-04-2016 IPR007139 Protein of unknown function DUF349 APS56_RS08705 b706ba2e10143f624c04a7300b9fa495 446 SUPERFAMILY SSF56349 144 423 2.91E-22 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS08705 b706ba2e10143f624c04a7300b9fa495 446 Gene3D G3DSA:1.10.443.10 249 424 7.9E-18 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS08705 b706ba2e10143f624c04a7300b9fa495 446 Pfam PF00589 Phage integrase family 273 424 4.8E-9 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS08705 b706ba2e10143f624c04a7300b9fa495 446 PANTHER PTHR30349:SF34 57 423 1.5E-15 T 20-04-2016 APS56_RS08705 b706ba2e10143f624c04a7300b9fa495 446 PANTHER PTHR30349 57 423 1.5E-15 T 20-04-2016 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 Gene3D G3DSA:3.40.720.10 27 407 7.9E-105 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 PANTHER PTHR10342 232 523 9.0E-128 T 20-04-2016 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 PANTHER PTHR10342 2 213 9.0E-128 T 20-04-2016 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 Pfam PF00884 Sulfatase 30 393 1.6E-72 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 SUPERFAMILY SSF53649 485 523 1.89E-118 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 SUPERFAMILY SSF53649 28 449 1.89E-118 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 ProSitePatterns PS00523 Sulfatases signature 1. 76 88 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 PANTHER PTHR10342:SF199 232 523 9.0E-128 T 20-04-2016 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 PANTHER PTHR10342:SF199 2 213 9.0E-128 T 20-04-2016 APS56_RS09720 dd4ec34f9871798ca23e230cc0d8a84e 526 Gene3D G3DSA:3.30.1120.10 408 523 1.1E-13 T 20-04-2016 APS56_RS05795 7637e1f116dd17968a965782662b46d5 272 SUPERFAMILY SSF51569 4 271 3.11E-94 T 20-04-2016 APS56_RS05795 7637e1f116dd17968a965782662b46d5 272 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 16 270 4.8E-111 T 20-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APS56_RS05795 7637e1f116dd17968a965782662b46d5 272 Gene3D G3DSA:3.20.20.70 15 270 1.4E-104 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS05795 7637e1f116dd17968a965782662b46d5 272 PANTHER PTHR21057 9 270 3.8E-132 T 20-04-2016 APS56_RS05795 7637e1f116dd17968a965782662b46d5 272 PANTHER PTHR21057:SF2 9 270 3.8E-132 T 20-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APS56_RS05795 7637e1f116dd17968a965782662b46d5 272 Pfam PF00793 DAHP synthetase I family 8 268 1.9E-57 T 20-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 SUPERFAMILY SSF55347 166 311 1.8E-26 T 20-04-2016 APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 PANTHER PTHR22604:SF101 1 384 5.4E-82 T 20-04-2016 APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 172 273 2.3E-9 T 20-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 SUPERFAMILY SSF51735 20 190 7.76E-40 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 Gene3D G3DSA:3.40.50.720 33 171 3.7E-41 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 PANTHER PTHR22604 1 384 5.4E-82 T 20-04-2016 APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 Gene3D G3DSA:3.30.360.10 339 391 5.3E-34 T 20-04-2016 APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 Gene3D G3DSA:3.30.360.10 172 301 5.3E-34 T 20-04-2016 APS56_RS10100 01e7e2f368a7ec6ee3913f72d14e227c 396 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 37 153 1.3E-17 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS15135 00410effe3280a14f816954b0edd861f 144 SUPERFAMILY SSF102546 1 136 1.83E-29 T 20-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APS56_RS15135 00410effe3280a14f816954b0edd861f 144 PANTHER PTHR31690:SF6 1 142 4.4E-24 T 20-04-2016 APS56_RS15135 00410effe3280a14f816954b0edd861f 144 Pfam PF05025 RbsD / FucU transport protein family 1 136 1.5E-32 T 20-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 APS56_RS15135 00410effe3280a14f816954b0edd861f 144 Gene3D G3DSA:3.40.1650.10 1 136 1.6E-32 T 20-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APS56_RS15135 00410effe3280a14f816954b0edd861f 144 PANTHER PTHR31690 1 142 4.4E-24 T 20-04-2016 APS56_RS05705 55802cfa32c35b8f287f04f079573300 164 Pfam PF03692 Putative zinc- or iron-chelating domain 50 137 4.8E-15 T 20-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein APS56_RS02810 cbfdab24a87229186219b6a2d282a1cb 175 Pfam PF04239 Protein of unknown function (DUF421) 98 166 4.8E-13 T 20-04-2016 IPR007353 Protein of unknown function DUF421 APS56_RS02810 cbfdab24a87229186219b6a2d282a1cb 175 PANTHER PTHR34582 1 173 2.7E-44 T 20-04-2016 APS56_RS02810 cbfdab24a87229186219b6a2d282a1cb 175 Gene3D G3DSA:3.30.240.20 92 161 5.1E-19 T 20-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain APS56_RS02810 cbfdab24a87229186219b6a2d282a1cb 175 PANTHER PTHR34582:SF1 1 173 2.7E-44 T 20-04-2016 APS56_RS07835 2615e77a95fb5769392608aa8f887cb5 486 SUPERFAMILY SSF52540 36 330 1.32E-21 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07835 2615e77a95fb5769392608aa8f887cb5 486 Gene3D G3DSA:3.40.50.300 37 244 5.9E-21 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS07835 2615e77a95fb5769392608aa8f887cb5 486 PANTHER PTHR30267:SF3 6 385 4.9E-126 T 20-04-2016 APS56_RS07835 2615e77a95fb5769392608aa8f887cb5 486 PANTHER PTHR30267 6 385 4.9E-126 T 20-04-2016 APS56_RS08910 1285ceab18a8ca1a6889604f9845bf0b 441 SUPERFAMILY SSF49265 40 128 2.18E-18 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS08910 1285ceab18a8ca1a6889604f9845bf0b 441 Gene3D G3DSA:2.60.40.10 41 127 1.1E-21 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS08910 1285ceab18a8ca1a6889604f9845bf0b 441 SMART SM00060 43 116 2.9E-12 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS08910 1285ceab18a8ca1a6889604f9845bf0b 441 Pfam PF00041 Fibronectin type III domain 44 117 3.9E-10 T 20-04-2016 IPR003961 Fibronectin type III GO:0005515 APS56_RS06250 7100ca64f2836368715423695957c150 379 PANTHER PTHR30273 1 112 1.1E-63 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS06250 7100ca64f2836368715423695957c150 379 PANTHER PTHR30273 168 378 1.1E-63 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS06250 7100ca64f2836368715423695957c150 379 Pfam PF04773 FecR protein 169 261 2.3E-13 T 20-04-2016 IPR006860 FecR protein APS56_RS06250 7100ca64f2836368715423695957c150 379 PANTHER PTHR30273:SF2 1 112 1.1E-63 T 20-04-2016 APS56_RS06250 7100ca64f2836368715423695957c150 379 PANTHER PTHR30273:SF2 168 378 1.1E-63 T 20-04-2016 APS56_RS06250 7100ca64f2836368715423695957c150 379 Pfam PF16344 Domain of unknown function (DUF4974) 279 377 1.0E-22 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS03345 ac5b8bde838093086ba8b68960cc0586 379 Gene3D G3DSA:3.40.640.10 17 246 2.2E-78 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS03345 ac5b8bde838093086ba8b68960cc0586 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 20-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APS56_RS03345 ac5b8bde838093086ba8b68960cc0586 379 PANTHER PTHR11601 3 379 2.3E-127 T 20-04-2016 APS56_RS03345 ac5b8bde838093086ba8b68960cc0586 379 Pfam PF00266 Aminotransferase class-V 4 371 1.2E-74 T 20-04-2016 IPR000192 Aminotransferase class V domain APS56_RS03345 ac5b8bde838093086ba8b68960cc0586 379 Gene3D G3DSA:3.90.1150.10 247 376 4.8E-29 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS03345 ac5b8bde838093086ba8b68960cc0586 379 PANTHER PTHR11601:SF45 3 379 2.3E-127 T 20-04-2016 APS56_RS03345 ac5b8bde838093086ba8b68960cc0586 379 SUPERFAMILY SSF53383 4 378 2.76E-90 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS03345 ac5b8bde838093086ba8b68960cc0586 379 PIRSF PIRSF005572 1 379 1.2E-108 T 20-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APS56_RS14140 791d65e889076d9c6df1cafea8ff23cb 214 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 181 3.9E-41 T 20-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS14140 791d65e889076d9c6df1cafea8ff23cb 214 Gene3D G3DSA:3.40.50.2020 5 212 8.3E-56 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS14140 791d65e889076d9c6df1cafea8ff23cb 214 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 214 27.021 T 20-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APS56_RS14140 791d65e889076d9c6df1cafea8ff23cb 214 Pfam PF00156 Phosphoribosyl transferase domain 50 156 9.4E-18 T 20-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APS56_RS14140 791d65e889076d9c6df1cafea8ff23cb 214 PANTHER PTHR19278 1 208 5.1E-64 T 20-04-2016 APS56_RS14140 791d65e889076d9c6df1cafea8ff23cb 214 SUPERFAMILY SSF53271 13 212 3.8E-54 T 20-04-2016 IPR029057 Phosphoribosyltransferase-like APS56_RS09365 24b5c3d171e02cdce7bec88625674a40 365 Pfam PF12706 Beta-lactamase superfamily domain 115 309 8.7E-35 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS09365 24b5c3d171e02cdce7bec88625674a40 365 PANTHER PTHR15032:SF4 93 359 2.4E-80 T 20-04-2016 APS56_RS09365 24b5c3d171e02cdce7bec88625674a40 365 SUPERFAMILY SSF56281 100 174 3.2E-32 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS09365 24b5c3d171e02cdce7bec88625674a40 365 SUPERFAMILY SSF56281 201 348 3.2E-32 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS09365 24b5c3d171e02cdce7bec88625674a40 365 Gene3D G3DSA:3.60.15.10 74 361 4.4E-91 T 20-04-2016 IPR001279 Metallo-beta-lactamase APS56_RS09365 24b5c3d171e02cdce7bec88625674a40 365 PANTHER PTHR15032 93 359 2.4E-80 T 20-04-2016 APS56_RS09365 24b5c3d171e02cdce7bec88625674a40 365 PIRSF PIRSF038896 10 351 4.3E-82 T 20-04-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 APS56_RS04650 435ee65fce7bbd5536b024f04e369bc2 551 Gene3D G3DSA:1.25.40.10 355 441 6.5E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04650 435ee65fce7bbd5536b024f04e369bc2 551 Gene3D G3DSA:1.25.40.10 197 282 6.5E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04650 435ee65fce7bbd5536b024f04e369bc2 551 Gene3D G3DSA:1.25.40.10 315 319 6.5E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04650 435ee65fce7bbd5536b024f04e369bc2 551 Pfam PF07980 SusD family 351 551 2.0E-30 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS04650 435ee65fce7bbd5536b024f04e369bc2 551 Pfam PF14322 Starch-binding associating with outer membrane 49 216 3.9E-17 T 20-04-2016 APS56_RS04650 435ee65fce7bbd5536b024f04e369bc2 551 SUPERFAMILY SSF48452 518 551 6.7E-97 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04650 435ee65fce7bbd5536b024f04e369bc2 551 SUPERFAMILY SSF48452 18 468 6.7E-97 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS02895 da35fd1beb32268ce0d7710bf338184e 234 PANTHER PTHR30027:SF3 1 225 2.0E-54 T 20-04-2016 APS56_RS02895 da35fd1beb32268ce0d7710bf338184e 234 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 1 227 8.4E-43 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS02895 da35fd1beb32268ce0d7710bf338184e 234 SUPERFAMILY SSF75217 72 231 1.94E-42 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS02895 da35fd1beb32268ce0d7710bf338184e 234 Pfam PF04452 RNA methyltransferase 17 229 6.7E-60 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS02895 da35fd1beb32268ce0d7710bf338184e 234 Gene3D G3DSA:3.40.1280.10 1 232 2.8E-65 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS02895 da35fd1beb32268ce0d7710bf338184e 234 SUPERFAMILY SSF88697 1 68 2.36E-11 T 20-04-2016 IPR015947 PUA-like domain APS56_RS02895 da35fd1beb32268ce0d7710bf338184e 234 PIRSF PIRSF015601 1 234 4.8E-58 T 20-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APS56_RS02895 da35fd1beb32268ce0d7710bf338184e 234 PANTHER PTHR30027 1 225 2.0E-54 T 20-04-2016 APS56_RS15055 5b6213a82b7a9cfd4d95ba21b4930bbc 264 SUPERFAMILY SSF53639 9 261 2.75E-36 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS15055 5b6213a82b7a9cfd4d95ba21b4930bbc 264 Gene3D G3DSA:3.40.225.10 10 262 8.0E-54 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS15055 5b6213a82b7a9cfd4d95ba21b4930bbc 264 PANTHER PTHR22789:SF4 68 260 1.1E-48 T 20-04-2016 APS56_RS15055 5b6213a82b7a9cfd4d95ba21b4930bbc 264 PANTHER PTHR22789:SF4 1 43 1.1E-48 T 20-04-2016 APS56_RS15055 5b6213a82b7a9cfd4d95ba21b4930bbc 264 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 18 238 5.3E-22 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS15055 5b6213a82b7a9cfd4d95ba21b4930bbc 264 SMART SM01007 15 240 4.1E-10 T 20-04-2016 IPR001303 Class II aldolase/adducin N-terminal APS56_RS15055 5b6213a82b7a9cfd4d95ba21b4930bbc 264 PANTHER PTHR22789 68 260 1.1E-48 T 20-04-2016 APS56_RS15055 5b6213a82b7a9cfd4d95ba21b4930bbc 264 PANTHER PTHR22789 1 43 1.1E-48 T 20-04-2016 APS56_RS13490 847d0c036579e088c6c88e20d53d481c 321 Pfam PF08885 GSCFA family 24 263 3.0E-88 T 20-04-2016 IPR014982 GSCFA APS56_RS13490 847d0c036579e088c6c88e20d53d481c 321 Gene3D G3DSA:3.40.50.1110 119 261 2.8E-4 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS09775 234c597ffdb61105b0548ae337a9511e 700 Gene3D G3DSA:3.20.20.70 208 499 9.6E-35 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS09775 234c597ffdb61105b0548ae337a9511e 700 SUPERFAMILY SSF51445 210 303 8.43E-35 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS09775 234c597ffdb61105b0548ae337a9511e 700 SUPERFAMILY SSF51445 333 499 8.43E-35 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS09775 234c597ffdb61105b0548ae337a9511e 700 PANTHER PTHR31268 205 661 7.5E-46 T 20-04-2016 APS56_RS09775 234c597ffdb61105b0548ae337a9511e 700 Pfam PF05691 Raffinose synthase or seed imbibition protein Sip1 177 260 1.1E-7 T 20-04-2016 IPR008811 Glycosyl hydrolases 36 APS56_RS09775 234c597ffdb61105b0548ae337a9511e 700 Pfam PF05691 Raffinose synthase or seed imbibition protein Sip1 289 540 7.8E-17 T 20-04-2016 IPR008811 Glycosyl hydrolases 36 APS56_RS09775 234c597ffdb61105b0548ae337a9511e 700 PANTHER PTHR31268:SF7 205 661 7.5E-46 T 20-04-2016 APS56_RS06500 a42f356b1f6c82ebe1bc38983f17319d 390 Pfam PF07766 LETM1-like protein 301 387 3.0E-12 T 20-04-2016 IPR011685 LETM1-like APS56_RS16510 408c5fe05cf1309be4cc584c2c83dc23 120 SUPERFAMILY SSF51735 3 119 8.17E-19 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS16510 408c5fe05cf1309be4cc584c2c83dc23 120 Gene3D G3DSA:3.40.50.720 3 118 3.4E-25 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS16510 408c5fe05cf1309be4cc584c2c83dc23 120 Pfam PF13380 CoA binding domain 3 114 9.4E-19 T 20-04-2016 IPR003781 CoA-binding GO:0048037 APS56_RS00885 fae92b0a9be8ac1c8f22481c8edb789b 338 Pfam PF02625 XdhC and CoxI family 21 82 5.9E-14 T 20-04-2016 IPR003777 XdhC- CoxI APS56_RS00885 fae92b0a9be8ac1c8f22481c8edb789b 338 Pfam PF13478 XdhC Rossmann domain 172 315 4.3E-28 T 20-04-2016 IPR027051 XdhC Rossmann domain APS56_RS00885 fae92b0a9be8ac1c8f22481c8edb789b 338 PANTHER PTHR30388:SF4 6 338 7.2E-59 T 20-04-2016 APS56_RS00885 fae92b0a9be8ac1c8f22481c8edb789b 338 PANTHER PTHR30388 6 338 7.2E-59 T 20-04-2016 APS56_RS12200 ce7f54cfdc5d84ce704dde754b7c71de 208 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 28 207 1.1E-57 T 20-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APS56_RS12200 ce7f54cfdc5d84ce704dde754b7c71de 208 PANTHER PTHR30098 7 208 2.7E-62 T 20-04-2016 APS56_RS12200 ce7f54cfdc5d84ce704dde754b7c71de 208 SUPERFAMILY SSF55729 3 207 3.07E-77 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS12200 ce7f54cfdc5d84ce704dde754b7c71de 208 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 31 199 2.8E-66 T 20-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APS56_RS12200 ce7f54cfdc5d84ce704dde754b7c71de 208 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 208 76.105 T 20-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APS56_RS12320 55f82976fbccf26b1af3a83ac9f3bc4a 248 PANTHER PTHR12390 6 247 8.3E-21 T 20-04-2016 APS56_RS12320 55f82976fbccf26b1af3a83ac9f3bc4a 248 Pfam PF02602 Uroporphyrinogen-III synthase HemD 25 235 4.0E-35 T 20-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS12320 55f82976fbccf26b1af3a83ac9f3bc4a 248 SUPERFAMILY SSF69618 4 241 4.97E-42 T 20-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APS56_RS12320 55f82976fbccf26b1af3a83ac9f3bc4a 248 Gene3D G3DSA:3.40.50.10090 11 129 4.2E-14 T 20-04-2016 APS56_RS12320 55f82976fbccf26b1af3a83ac9f3bc4a 248 Gene3D G3DSA:3.40.50.10090 135 247 2.0E-22 T 20-04-2016 APS56_RS06535 1f0aae7d6fc6621385b6b7d616bc58ab 470 Pfam PF09471 IgA Peptidase M64 29 274 2.0E-33 T 20-04-2016 IPR019026 Peptidase M64, IgA APS56_RS06535 1f0aae7d6fc6621385b6b7d616bc58ab 470 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 395 470 3.1E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 Gene3D G3DSA:1.10.150.130 4 99 1.5E-18 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 PANTHER PTHR30349 7 297 3.2E-100 T 20-04-2016 APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 Pfam PF00589 Phage integrase family 113 283 1.0E-45 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 297 2.9E-99 T 20-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 PANTHER PTHR30349:SF5 7 297 3.2E-100 T 20-04-2016 APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 298 28.83 T 20-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 Gene3D G3DSA:1.10.443.10 108 297 2.3E-53 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 SUPERFAMILY SSF56349 10 288 3.24E-58 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS03310 7f4a203cc0a666827ab64addc972f68e 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 88 1.3E-12 T 20-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APS56_RS06705 eeea83a3ac0769e0ead4580807bf9111 197 Pfam PF10263 SprT-like family 23 96 4.2E-7 T 20-04-2016 IPR006640 SprT-like APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 PANTHER PTHR23514 188 387 6.6E-142 T 20-04-2016 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 PANTHER PTHR23514 2 170 6.6E-142 T 20-04-2016 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 PANTHER PTHR23514 409 431 6.6E-142 T 20-04-2016 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 SUPERFAMILY SSF103473 5 428 1.1E-37 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 Gene3D G3DSA:1.20.1250.20 13 221 6.5E-20 T 20-04-2016 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 92 390 9.1E-81 T 20-04-2016 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 Pfam PF07690 Major Facilitator Superfamily 17 377 2.8E-20 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 PANTHER PTHR23514:SF10 188 387 6.6E-142 T 20-04-2016 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 PANTHER PTHR23514:SF10 2 170 6.6E-142 T 20-04-2016 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 PANTHER PTHR23514:SF10 409 431 6.6E-142 T 20-04-2016 APS56_RS03040 1c97661433ee85f49972e147e80df0e9 434 Gene3D G3DSA:1.20.1250.20 235 388 5.4E-5 T 20-04-2016 APS56_RS12180 50e22adc69c49a5ada0fca1e408aa8b2 129 PANTHER PTHR23089 4 129 5.2E-27 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APS56_RS12180 50e22adc69c49a5ada0fca1e408aa8b2 129 PRINTS PR00332 Histidine triad family signature 87 97 2.6E-14 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APS56_RS12180 50e22adc69c49a5ada0fca1e408aa8b2 129 PRINTS PR00332 Histidine triad family signature 4 20 2.6E-14 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APS56_RS12180 50e22adc69c49a5ada0fca1e408aa8b2 129 PRINTS PR00332 Histidine triad family signature 25 43 2.6E-14 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APS56_RS12180 50e22adc69c49a5ada0fca1e408aa8b2 129 Gene3D G3DSA:3.30.428.10 3 129 3.3E-27 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APS56_RS12180 50e22adc69c49a5ada0fca1e408aa8b2 129 PANTHER PTHR23089:SF7 4 129 5.2E-27 T 20-04-2016 APS56_RS12180 50e22adc69c49a5ada0fca1e408aa8b2 129 Pfam PF01230 HIT domain 11 101 1.1E-15 T 20-04-2016 IPR001310 Histidine triad (HIT) protein APS56_RS12180 50e22adc69c49a5ada0fca1e408aa8b2 129 SUPERFAMILY SSF54197 2 128 1.21E-32 T 20-04-2016 IPR011146 HIT-like domain GO:0003824 APS56_RS15555 5bdcdde7891227899377a5676c0e8496 615 Pfam PF14322 Starch-binding associating with outer membrane 20 234 1.8E-17 T 20-04-2016 APS56_RS15555 5bdcdde7891227899377a5676c0e8496 615 Pfam PF07980 SusD family 304 615 9.4E-46 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS15555 5bdcdde7891227899377a5676c0e8496 615 Gene3D G3DSA:1.25.40.10 429 530 6.7E-29 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15555 5bdcdde7891227899377a5676c0e8496 615 Gene3D G3DSA:1.25.40.10 215 352 6.7E-29 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15555 5bdcdde7891227899377a5676c0e8496 615 SUPERFAMILY SSF48452 17 615 1.11E-98 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04830 7d52db21381d86ead62bf296006d24d8 787 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 1 263 4.8E-56 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS04830 7d52db21381d86ead62bf296006d24d8 787 Gene3D G3DSA:2.70.98.50 1 405 1.1E-104 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS04830 7d52db21381d86ead62bf296006d24d8 787 PIRSF PIRSF007663 1 786 2.9E-192 T 20-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 APS56_RS04830 7d52db21381d86ead62bf296006d24d8 787 SUPERFAMILY SSF48208 337 760 7.71E-68 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS04830 7d52db21381d86ead62bf296006d24d8 787 SUPERFAMILY SSF48208 266 304 7.71E-68 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS04830 7d52db21381d86ead62bf296006d24d8 787 PANTHER PTHR31084 1 758 6.6E-190 T 20-04-2016 APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 SMART SM00812 24 353 5.2E-75 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 Pfam PF01120 Alpha-L-fucosidase 25 315 9.9E-76 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 PANTHER PTHR10030 31 354 1.5E-59 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 SUPERFAMILY SSF51445 28 317 8.43E-86 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 Gene3D G3DSA:3.20.20.80 28 317 5.6E-84 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 PRINTS PR00741 Glycosyl hydrolase family 29 signature 268 289 2.2E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 PRINTS PR00741 Glycosyl hydrolase family 29 signature 301 323 2.2E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 PRINTS PR00741 Glycosyl hydrolase family 29 signature 98 114 2.2E-14 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS10070 bb9801f1d56aa4c2a9817d4b0c75feb0 434 PIRSF PIRSF001092 18 426 6.3E-88 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS02715 9bfbd94427dc37058dcdea512c9bf775 280 Pfam PF09357 RteC protein 61 279 2.7E-81 T 20-04-2016 IPR018534 Tetracycline regulation of excision, RteC APS56_RS11730 ca28f78d773b0bf8dbf4cb2e46db7bcd 305 Gene3D G3DSA:3.40.630.10 31 296 5.3E-56 T 20-04-2016 APS56_RS11730 ca28f78d773b0bf8dbf4cb2e46db7bcd 305 PANTHER PTHR12147 4 226 1.3E-37 T 20-04-2016 APS56_RS11730 ca28f78d773b0bf8dbf4cb2e46db7bcd 305 PANTHER PTHR12147 246 296 1.3E-37 T 20-04-2016 APS56_RS11730 ca28f78d773b0bf8dbf4cb2e46db7bcd 305 SUPERFAMILY SSF53187 31 296 1.83E-58 T 20-04-2016 APS56_RS11730 ca28f78d773b0bf8dbf4cb2e46db7bcd 305 Pfam PF04389 Peptidase family M28 98 287 2.5E-41 T 20-04-2016 IPR007484 Peptidase M28 APS56_RS12680 976812828da5b0f24f2b4c77e7fe20cf 288 SUPERFAMILY SSF53098 113 276 3.34E-36 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS12680 976812828da5b0f24f2b4c77e7fe20cf 288 Pfam PF13276 HTH-like domain 43 94 1.7E-13 T 20-04-2016 IPR025948 HTH-like domain APS56_RS12680 976812828da5b0f24f2b4c77e7fe20cf 288 PANTHER PTHR32552 8 283 9.2E-66 T 20-04-2016 APS56_RS12680 976812828da5b0f24f2b4c77e7fe20cf 288 Pfam PF00665 Integrase core domain 120 235 1.6E-27 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS12680 976812828da5b0f24f2b4c77e7fe20cf 288 Gene3D G3DSA:3.30.420.10 113 275 6.1E-35 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS00265 e35fd8cbcef0c2fff3da35f75d3246dc 226 Pfam PF14127 Domain of unknown function (DUF4294) 37 193 1.8E-59 T 20-04-2016 IPR025636 Protein of unknown function DUF4294 APS56_RS01315 22cce17db7e9480079acc9a56af4937a 291 Gene3D G3DSA:2.40.160.20 183 285 1.4E-4 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS07120 883d1d2ea8d804cf3bf2fa2e83891727 106 SMART SM00530 22 77 2.4E-10 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS07120 883d1d2ea8d804cf3bf2fa2e83891727 106 Pfam PF01381 Helix-turn-helix 23 75 1.9E-10 T 20-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APS56_RS07120 883d1d2ea8d804cf3bf2fa2e83891727 106 SUPERFAMILY SSF47413 13 82 2.95E-14 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS07120 883d1d2ea8d804cf3bf2fa2e83891727 106 Gene3D G3DSA:1.10.260.40 12 83 1.7E-14 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS09025 73a0b8536727996a3c54c77db2516683 518 PANTHER PTHR32057 1 518 3.9E-205 T 20-04-2016 APS56_RS09025 73a0b8536727996a3c54c77db2516683 518 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 21 483 1.1E-134 T 20-04-2016 IPR003846 Uncharacterised protein family UPF0061 APS56_RS09025 73a0b8536727996a3c54c77db2516683 518 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 501 39.061 T 20-04-2016 IPR003846 Uncharacterised protein family UPF0061 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 PANTHER PTHR30203 15 472 1.8E-123 T 20-04-2016 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 Pfam PF02321 Outer membrane efflux protein 71 261 4.3E-26 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 Pfam PF02321 Outer membrane efflux protein 287 468 3.5E-23 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 Gene3D G3DSA:1.20.1600.10 357 471 1.0E-88 T 20-04-2016 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 Gene3D G3DSA:1.20.1600.10 60 97 1.0E-88 T 20-04-2016 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 Gene3D G3DSA:1.20.1600.10 149 319 1.0E-88 T 20-04-2016 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 Gene3D G3DSA:2.20.200.10 107 148 1.5E-14 T 20-04-2016 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 Gene3D G3DSA:2.20.200.10 320 355 1.5E-14 T 20-04-2016 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 470 1.1E-85 T 20-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 SUPERFAMILY SSF56954 7 471 1.07E-94 T 20-04-2016 APS56_RS11625 1c6afe7bb44800d3a2ba9134d82cfb9e 472 PANTHER PTHR30203:SF14 15 472 1.8E-123 T 20-04-2016 APS56_RS02970 60d834fcba785f5e715bfe693c44ed8d 262 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 66 247 2.2E-8 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS02970 60d834fcba785f5e715bfe693c44ed8d 262 Gene3D G3DSA:3.40.50.1110 62 260 1.3E-17 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS02970 60d834fcba785f5e715bfe693c44ed8d 262 SUPERFAMILY SSF52266 49 258 3.66E-18 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS01885 9e45d2d5faaaa12a8e85297acc1fce32 621 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 553 620 1.7E-8 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS00640 e82f1b1f84e2d97ef0d5c9f57df41951 426 SUPERFAMILY SSF51658 47 405 5.11E-80 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS00640 e82f1b1f84e2d97ef0d5c9f57df41951 426 Gene3D G3DSA:3.20.20.150 46 405 6.7E-75 T 20-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APS56_RS00640 e82f1b1f84e2d97ef0d5c9f57df41951 426 PANTHER PTHR30268 14 419 3.4E-105 T 20-04-2016 APS56_RS07290 631973b92ad5767487b58aadc5a3a361 639 SUPERFAMILY SSF54001 269 348 1.62E-5 T 20-04-2016 APS56_RS07290 631973b92ad5767487b58aadc5a3a361 639 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 56 191 3.4E-12 T 20-04-2016 IPR024618 Domain of unknown function DUF3857 APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 SMART SM00710 469 496 1700.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 SMART SM00710 351 372 2.4 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 SMART SM00710 232 254 9400.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 SMART SM00710 270 292 780.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 SMART SM00710 298 320 2900.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 SUPERFAMILY SSF51126 272 548 5.5E-22 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 748 820 9.0E-14 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 Gene3D G3DSA:2.160.20.10 17 249 5.4E-21 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 Gene3D G3DSA:2.160.20.10 272 548 2.3E-16 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 SUPERFAMILY SSF51126 180 328 4.57E-26 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09955 3ba62478d24a7ee324547eb1ecf68ef7 821 SUPERFAMILY SSF51126 16 144 4.57E-26 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS13180 76cf9483f4215c75dbc8492f0003cf22 504 PANTHER PTHR31901 5 500 3.1E-56 T 20-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- APS56_RS13180 76cf9483f4215c75dbc8492f0003cf22 504 PANTHER PTHR31901:SF5 5 500 3.1E-56 T 20-04-2016 APS56_RS13180 76cf9483f4215c75dbc8492f0003cf22 504 Pfam PF03321 GH3 auxin-responsive promoter 21 494 1.5E-110 T 20-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- APS56_RS12880 25746d3a6cd080baf567f932f04e97cb 153 Gene3D G3DSA:3.30.300.70 4 71 3.3E-8 T 20-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APS56_RS12880 25746d3a6cd080baf567f932f04e97cb 153 SUPERFAMILY SSF75420 3 74 9.42E-10 T 20-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APS56_RS12880 25746d3a6cd080baf567f932f04e97cb 153 PANTHER PTHR33867:SF1 1 153 4.2E-19 T 20-04-2016 APS56_RS12880 25746d3a6cd080baf567f932f04e97cb 153 Pfam PF02576 Putative ribosome maturation factor RimP 17 146 5.2E-17 T 20-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APS56_RS12880 25746d3a6cd080baf567f932f04e97cb 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 4 153 15.41 T 20-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APS56_RS12880 25746d3a6cd080baf567f932f04e97cb 153 PANTHER PTHR33867 1 153 4.2E-19 T 20-04-2016 APS56_RS04815 c783d777e65be768946aa4d781d40613 561 PANTHER PTHR11819 2 415 3.0E-69 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS04815 c783d777e65be768946aa4d781d40613 561 Pfam PF00474 Sodium:solute symporter family 33 420 6.6E-39 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS04815 c783d777e65be768946aa4d781d40613 561 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 147 172 - T 20-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APS56_RS09060 870f6f60d83941b7f45f37016dcb8e1d 178 Gene3D G3DSA:3.30.70.1260 105 174 2.8E-4 T 20-04-2016 APS56_RS09060 870f6f60d83941b7f45f37016dcb8e1d 178 PANTHER PTHR36439 1 178 1.7E-36 T 20-04-2016 APS56_RS09060 870f6f60d83941b7f45f37016dcb8e1d 178 Pfam PF08002 Protein of unknown function (DUF1697) 1 135 7.2E-40 T 20-04-2016 IPR012545 Protein of unknown function DUF1697 APS56_RS09060 870f6f60d83941b7f45f37016dcb8e1d 178 Gene3D G3DSA:3.30.70.1280 1 87 4.5E-29 T 20-04-2016 APS56_RS09060 870f6f60d83941b7f45f37016dcb8e1d 178 PIRSF PIRSF008502 1 178 2.3E-45 T 20-04-2016 IPR012545 Protein of unknown function DUF1697 APS56_RS09060 870f6f60d83941b7f45f37016dcb8e1d 178 PANTHER PTHR36439:SF1 1 178 1.7E-36 T 20-04-2016 APS56_RS09060 870f6f60d83941b7f45f37016dcb8e1d 178 SUPERFAMILY SSF160379 1 174 1.19E-46 T 20-04-2016 APS56_RS15245 9ddfbd0de19fc00a9b1636883fd59f34 221 Gene3D G3DSA:3.40.50.1820 11 218 1.2E-9 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS15245 9ddfbd0de19fc00a9b1636883fd59f34 221 SUPERFAMILY SSF53474 8 214 2.59E-11 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06310 4b441ceb98d74a13ebcccfb119c6fcf5 500 Gene3D G3DSA:3.20.20.80 15 292 6.0E-35 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS06310 4b441ceb98d74a13ebcccfb119c6fcf5 500 SUPERFAMILY SSF51445 16 295 2.14E-48 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS06310 4b441ceb98d74a13ebcccfb119c6fcf5 500 PANTHER PTHR21040 16 292 1.4E-47 T 20-04-2016 APS56_RS06310 4b441ceb98d74a13ebcccfb119c6fcf5 500 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 67 261 2.3E-17 T 20-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 SUPERFAMILY SSF103473 1 406 6.8E-68 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PANTHER PTHR23504:SF18 1 396 9.0E-137 T 20-04-2016 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 137 159 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 18 34 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 306 326 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 107 128 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 341 364 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 80 104 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 165 185 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 281 302 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 224 241 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PRINTS PR01035 Tetracycline resistance protein signature 253 273 9.0E-67 T 20-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 Pfam PF07690 Major Facilitator Superfamily 12 357 3.1E-54 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 PANTHER PTHR23504 1 396 9.0E-137 T 20-04-2016 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 Gene3D G3DSA:1.20.1250.20 6 195 3.4E-40 T 20-04-2016 APS56_RS02600 be909d436aee53d2c869754dd780711b 412 Gene3D G3DSA:1.20.1250.20 215 409 1.6E-22 T 20-04-2016 APS56_RS02900 77e920b1dfbe91276a35c83b88aeeaa8 214 Pfam PF13709 Domain of unknown function (DUF4159) 22 212 2.6E-65 T 20-04-2016 IPR025297 Domain of unknown function DUF4159 APS56_RS15090 892dbdbcfbbebf54d70539d0cc81bbfd 124 PIRSF PIRSF029883 7 117 8.4E-33 T 20-04-2016 IPR025499 Pectin degradation protein KdgF UniPathway: UPA00545 APS56_RS15090 892dbdbcfbbebf54d70539d0cc81bbfd 124 PANTHER PTHR40112:SF1 1 112 2.6E-23 T 20-04-2016 APS56_RS15090 892dbdbcfbbebf54d70539d0cc81bbfd 124 Pfam PF07883 Cupin domain 38 91 2.5E-10 T 20-04-2016 IPR013096 Cupin 2, conserved barrel APS56_RS15090 892dbdbcfbbebf54d70539d0cc81bbfd 124 PANTHER PTHR40112 1 112 2.6E-23 T 20-04-2016 APS56_RS15090 892dbdbcfbbebf54d70539d0cc81bbfd 124 SUPERFAMILY SSF51182 12 112 1.05E-20 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS15090 892dbdbcfbbebf54d70539d0cc81bbfd 124 Gene3D G3DSA:2.60.120.10 8 112 3.0E-29 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS00965 78b9f607f2a0f8cc9b2070dc26e6b116 501 SUPERFAMILY SSF48452 19 469 1.77E-24 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS00965 78b9f607f2a0f8cc9b2070dc26e6b116 501 Gene3D G3DSA:1.25.40.10 352 436 8.8E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS00965 78b9f607f2a0f8cc9b2070dc26e6b116 501 Gene3D G3DSA:1.25.40.10 204 216 8.8E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS00965 78b9f607f2a0f8cc9b2070dc26e6b116 501 Pfam PF07980 SusD family 338 461 2.8E-10 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS01325 15993ee53ffc46e317c0f4e40b6eba6c 115 Pfam PF16250 Domain of unknown function (DUF4907) 41 105 4.5E-23 T 20-04-2016 IPR032593 Protein of unknown function DUF4907 APS56_RS08595 debd9a8ba3b779a8fa70d29a821d110e 184 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 175 1.3E-14 T 20-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related APS56_RS08595 debd9a8ba3b779a8fa70d29a821d110e 184 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 14 174 5.3E-25 T 20-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APS56_RS00105 951ca63b38dac6a58a643d32cf2a8c72 518 PANTHER PTHR11938 151 481 1.2E-66 T 20-04-2016 APS56_RS00105 951ca63b38dac6a58a643d32cf2a8c72 518 PANTHER PTHR11938:SF50 151 481 1.2E-66 T 20-04-2016 APS56_RS00105 951ca63b38dac6a58a643d32cf2a8c72 518 SUPERFAMILY SSF51395 6 485 2.15E-117 T 20-04-2016 APS56_RS00105 951ca63b38dac6a58a643d32cf2a8c72 518 Pfam PF01645 Conserved region in glutamate synthase 145 465 2.2E-81 T 20-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 APS56_RS00105 951ca63b38dac6a58a643d32cf2a8c72 518 Gene3D G3DSA:3.20.20.70 31 487 7.0E-111 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS00105 951ca63b38dac6a58a643d32cf2a8c72 518 PIRSF PIRSF006429 1 514 8.9E-144 T 20-04-2016 IPR024188 Glutamate synthase large subunit-like protein APS56_RS09070 40da6a065d6023afbd4525de4785e95e 309 Gene3D G3DSA:3.30.230.10 40 196 5.2E-8 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS09070 40da6a065d6023afbd4525de4785e95e 309 SUPERFAMILY SSF55060 176 303 3.36E-13 T 20-04-2016 IPR013750 GHMP kinase, C-terminal domain APS56_RS09070 40da6a065d6023afbd4525de4785e95e 309 SUPERFAMILY SSF54211 8 155 7.29E-7 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS09070 40da6a065d6023afbd4525de4785e95e 309 PRINTS PR00960 LmbP protein signature 88 109 5.8E-7 T 20-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 APS56_RS09070 40da6a065d6023afbd4525de4785e95e 309 PRINTS PR00960 LmbP protein signature 266 285 5.8E-7 T 20-04-2016 IPR001174 Galactokinase/homoserine kinase GO:0005524|GO:0008152|GO:0016301 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.1.168|MetaCyc: PWY-6478|UniPathway: UPA00543|UniPathway: UPA00977 APS56_RS04280 939f3fa864d4a61463834b56d2fc24af 324 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 257 324 1.5E-10 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS12945 4389386097320dfa145b88efd24bb5c2 318 SUPERFAMILY SSF103515 134 288 4.45E-5 T 20-04-2016 IPR005546 Autotransporter beta-domain APS56_RS12945 4389386097320dfa145b88efd24bb5c2 318 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 9 301 1.1E-80 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS12945 4389386097320dfa145b88efd24bb5c2 318 Pfam PF11751 Protein of unknown function (DUF3308) 24 299 7.4E-89 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS10420 cc36623a6117b41af2daaef18bedbd0d 356 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 290 356 8.2E-15 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS10420 cc36623a6117b41af2daaef18bedbd0d 356 SUPERFAMILY SSF49899 88 272 1.37E-22 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS10420 cc36623a6117b41af2daaef18bedbd0d 356 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 105 267 7.6E-19 T 20-04-2016 APS56_RS10420 cc36623a6117b41af2daaef18bedbd0d 356 Gene3D G3DSA:2.60.120.200 26 271 3.4E-22 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS01330 4a048283ed06b9024916edf7677a7d65 347 Pfam PF06580 Histidine kinase 161 237 3.5E-25 T 20-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APS56_RS01330 4a048283ed06b9024916edf7677a7d65 347 Gene3D G3DSA:3.30.565.10 210 292 8.8E-4 T 20-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APS56_RS01330 4a048283ed06b9024916edf7677a7d65 347 PANTHER PTHR34220:SF1 15 346 5.2E-65 T 20-04-2016 APS56_RS01330 4a048283ed06b9024916edf7677a7d65 347 PANTHER PTHR34220 15 346 5.2E-65 T 20-04-2016 APS56_RS02145 a0904819c2fe8b3c7b8eda1e67904a53 309 PANTHER PTHR22916 1 252 1.9E-46 T 20-04-2016 APS56_RS02145 a0904819c2fe8b3c7b8eda1e67904a53 309 Gene3D G3DSA:3.90.550.10 2 212 6.2E-50 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS02145 a0904819c2fe8b3c7b8eda1e67904a53 309 SUPERFAMILY SSF53448 1 250 1.59E-49 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS02145 a0904819c2fe8b3c7b8eda1e67904a53 309 Pfam PF00535 Glycosyl transferase family 2 3 150 1.7E-31 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS15645 c1099f0ee78b562f58c1b223e4eab0d4 863 Gene3D G3DSA:2.120.10.30 33 224 1.4E-7 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS15645 c1099f0ee78b562f58c1b223e4eab0d4 863 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 786 861 2.9E-8 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS15645 c1099f0ee78b562f58c1b223e4eab0d4 863 SUPERFAMILY SSF101898 33 233 2.75E-11 T 20-04-2016 APS56_RS08985 9076761980c15c61f2c4daee1648351d 118 Gene3D G3DSA:1.10.10.10 5 115 6.9E-37 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS08985 9076761980c15c61f2c4daee1648351d 118 SUPERFAMILY SSF46785 14 113 1.82E-28 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS08985 9076761980c15c61f2c4daee1648351d 118 PANTHER PTHR33204 14 115 6.3E-39 T 20-04-2016 APS56_RS08985 9076761980c15c61f2c4daee1648351d 118 PANTHER PTHR33204:SF5 14 115 6.3E-39 T 20-04-2016 APS56_RS08985 9076761980c15c61f2c4daee1648351d 118 Pfam PF01638 HxlR-like helix-turn-helix 26 114 1.6E-31 T 20-04-2016 IPR002577 Helix-turn-helix, HxlR type APS56_RS10620 d3fe8d42c70261e0e7d6ff5a0a9c56f3 170 SUPERFAMILY SSF54637 2 151 4.42E-41 T 20-04-2016 IPR029069 HotDog domain APS56_RS10620 d3fe8d42c70261e0e7d6ff5a0a9c56f3 170 PANTHER PTHR11049 5 151 2.2E-52 T 20-04-2016 APS56_RS10620 d3fe8d42c70261e0e7d6ff5a0a9c56f3 170 Pfam PF03061 Thioesterase superfamily 26 100 3.0E-14 T 20-04-2016 IPR006683 Thioesterase domain APS56_RS10620 d3fe8d42c70261e0e7d6ff5a0a9c56f3 170 Gene3D G3DSA:3.10.129.10 4 155 5.0E-49 T 20-04-2016 IPR029069 HotDog domain APS56_RS10275 2db799efe5022a58a3d77c6d907b3b6f 234 SUPERFAMILY SSF103088 98 217 1.44E-38 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS10275 2db799efe5022a58a3d77c6d907b3b6f 234 Pfam PF00691 OmpA family 117 212 1.9E-25 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS10275 2db799efe5022a58a3d77c6d907b3b6f 234 PRINTS PR01021 OMPA domain signature 163 179 7.4E-15 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS10275 2db799efe5022a58a3d77c6d907b3b6f 234 PRINTS PR01021 OMPA domain signature 148 163 7.4E-15 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS10275 2db799efe5022a58a3d77c6d907b3b6f 234 PRINTS PR01021 OMPA domain signature 118 140 7.4E-15 T 20-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APS56_RS10275 2db799efe5022a58a3d77c6d907b3b6f 234 Pfam PF13488 Glycine zipper 39 86 5.3E-9 T 20-04-2016 APS56_RS10275 2db799efe5022a58a3d77c6d907b3b6f 234 Gene3D G3DSA:3.30.1330.60 109 220 5.4E-40 T 20-04-2016 IPR006665 OmpA-like domain APS56_RS10275 2db799efe5022a58a3d77c6d907b3b6f 234 PANTHER PTHR30128 41 229 5.0E-42 T 20-04-2016 APS56_RS00340 c6a3f7161db72fc520291e9b110f1c29 79 SUPERFAMILY SSF68912 44 77 2.55E-5 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APS56_RS00340 c6a3f7161db72fc520291e9b110f1c29 79 Pfam PF07498 Rho termination factor, N-terminal domain 50 76 1.4E-6 T 20-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APS56_RS00340 c6a3f7161db72fc520291e9b110f1c29 79 Gene3D G3DSA:1.10.720.10 50 76 6.0E-5 T 20-04-2016 APS56_RS00030 244429db7da02c6bcadde4510fd70e12 161 Gene3D G3DSA:1.20.120.450 18 156 4.5E-9 T 20-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase APS56_RS00030 244429db7da02c6bcadde4510fd70e12 161 SUPERFAMILY SSF109854 15 148 4.76E-6 T 20-04-2016 APS56_RS12420 afc6b6514d8aa0727f4c971890505b0f 224 SUPERFAMILY SSF53335 45 189 1.26E-22 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS12420 afc6b6514d8aa0727f4c971890505b0f 224 Pfam PF02390 Putative methyltransferase 46 216 1.9E-30 T 20-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APS56_RS12420 afc6b6514d8aa0727f4c971890505b0f 224 PANTHER PTHR23417 7 222 2.0E-40 T 20-04-2016 APS56_RS12420 afc6b6514d8aa0727f4c971890505b0f 224 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 8 224 22.516 T 20-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APS56_RS12420 afc6b6514d8aa0727f4c971890505b0f 224 PANTHER PTHR23417:SF14 7 222 2.0E-40 T 20-04-2016 APS56_RS12420 afc6b6514d8aa0727f4c971890505b0f 224 Gene3D G3DSA:3.40.50.150 44 165 2.0E-12 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS12420 afc6b6514d8aa0727f4c971890505b0f 224 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 35 216 3.5E-34 T 20-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APS56_RS15205 3e394f6e713d984858451767a08e818e 315 SUPERFAMILY SSF53448 1 263 4.22E-44 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS15205 3e394f6e713d984858451767a08e818e 315 PANTHER PTHR10859 2 306 2.0E-145 T 20-04-2016 APS56_RS15205 3e394f6e713d984858451767a08e818e 315 PANTHER PTHR10859:SF100 2 306 2.0E-145 T 20-04-2016 APS56_RS15205 3e394f6e713d984858451767a08e818e 315 Gene3D G3DSA:3.90.550.10 1 138 9.7E-28 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS15205 3e394f6e713d984858451767a08e818e 315 Pfam PF00535 Glycosyl transferase family 2 4 126 7.1E-30 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS16380 583dcee68e1447e1c28d1a4d1d13d5e2 108 SMART SM01409 19 73 3.3E-5 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS16380 583dcee68e1447e1c28d1a4d1d13d5e2 108 Pfam PF01192 RNA polymerase Rpb6 22 73 5.0E-7 T 20-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APS56_RS00795 b0ee4c5f82e0868f1f4467a266ad3f93 319 SUPERFAMILY SSF51735 2 156 4.54E-39 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00795 b0ee4c5f82e0868f1f4467a266ad3f93 319 SUPERFAMILY SSF55347 123 237 2.14E-13 T 20-04-2016 APS56_RS00795 b0ee4c5f82e0868f1f4467a266ad3f93 319 PANTHER PTHR22604 1 317 8.3E-66 T 20-04-2016 APS56_RS00795 b0ee4c5f82e0868f1f4467a266ad3f93 319 Gene3D G3DSA:3.30.360.10 128 317 3.7E-25 T 20-04-2016 APS56_RS00795 b0ee4c5f82e0868f1f4467a266ad3f93 319 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 118 2.8E-25 T 20-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APS56_RS00795 b0ee4c5f82e0868f1f4467a266ad3f93 319 Gene3D G3DSA:3.40.50.720 1 127 1.5E-35 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS00795 b0ee4c5f82e0868f1f4467a266ad3f93 319 PANTHER PTHR22604:SF14 1 317 8.3E-66 T 20-04-2016 APS56_RS11300 f07a98ff69637223750e7045be364a9d 252 Pfam PF00149 Calcineurin-like phosphoesterase 8 136 7.0E-7 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS11300 f07a98ff69637223750e7045be364a9d 252 SUPERFAMILY SSF56300 7 237 1.9E-23 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS11300 f07a98ff69637223750e7045be364a9d 252 Gene3D G3DSA:3.60.21.10 197 250 1.6E-20 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS11300 f07a98ff69637223750e7045be364a9d 252 Gene3D G3DSA:3.60.21.10 8 162 1.6E-20 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS11300 f07a98ff69637223750e7045be364a9d 252 PANTHER PTHR34990 10 252 7.5E-41 T 20-04-2016 APS56_RS10145 6e8391316eefe02edaf8732d1fd120b1 216 Gene3D G3DSA:3.30.565.40 11 130 1.2E-19 T 20-04-2016 IPR025303 Domain of unknown function DUF4163 APS56_RS10145 6e8391316eefe02edaf8732d1fd120b1 216 Gene3D G3DSA:3.90.640.20 145 211 1.9E-15 T 20-04-2016 IPR021729 Domain of unknown function DUF3298 APS56_RS10145 6e8391316eefe02edaf8732d1fd120b1 216 Pfam PF13739 Domain of unknown function (DUF4163) 13 115 1.2E-13 T 20-04-2016 IPR025303 Domain of unknown function DUF4163 APS56_RS10145 6e8391316eefe02edaf8732d1fd120b1 216 Pfam PF11738 Protein of unknown function (DUF3298) 140 205 1.4E-12 T 20-04-2016 IPR021729 Domain of unknown function DUF3298 APS56_RS03390 1087c2f7f661938b4449a14d8553602f 84 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 8 83 5.3E-35 T 20-04-2016 IPR019886 Sodium symporter small subunit, predicted APS56_RS03390 1087c2f7f661938b4449a14d8553602f 84 Pfam PF13937 Domain of unknown function (DUF4212) 6 82 2.4E-34 T 20-04-2016 IPR019886 Sodium symporter small subunit, predicted APS56_RS11025 81ea2b23a488e5a64afd50f12fef128c 161 Pfam PF08570 Protein of unknown function (DUF1761) 8 158 3.0E-41 T 20-04-2016 IPR013879 Protein of unknown function DUF1761 APS56_RS09050 1f6b8b3077c23005760f65d1c4420354 228 PANTHER PTHR23344:SF25 8 228 1.6E-56 T 20-04-2016 APS56_RS09050 1f6b8b3077c23005760f65d1c4420354 228 PANTHER PTHR23344 8 228 1.6E-56 T 20-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APS56_RS09050 1f6b8b3077c23005760f65d1c4420354 228 Gene3D G3DSA:3.20.20.190 3 228 1.9E-62 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS09050 1f6b8b3077c23005760f65d1c4420354 228 SUPERFAMILY SSF51695 4 228 3.29E-59 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS09050 1f6b8b3077c23005760f65d1c4420354 228 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 10 226 3.4E-34 T 20-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SUPERFAMILY SSF51126 5 310 2.44E-31 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 565 633 4.6E-10 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 348 372 9900.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 210 247 1300.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 374 402 1200.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 148 170 0.35 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 179 208 31.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 283 309 3900.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 316 342 6100.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 250 278 1800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SMART SM00710 407 429 2500.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 Gene3D G3DSA:2.160.20.10 8 344 9.7E-36 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS13740 c290a9e2bf33d1799b307eb8dbc89e1c 633 SUPERFAMILY SSF51126 248 543 9.42E-14 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS13220 a48104be2305dff653d98ce21a7d3a25 219 Gene3D G3DSA:3.40.50.150 47 145 8.5E-14 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS13220 a48104be2305dff653d98ce21a7d3a25 219 SUPERFAMILY SSF53335 30 156 4.8E-16 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS13220 a48104be2305dff653d98ce21a7d3a25 219 Pfam PF13649 Methyltransferase domain 63 145 9.9E-8 T 20-04-2016 APS56_RS10525 db901c744514e20882b6d985276d2740 559 PANTHER PTHR24220 327 437 3.8E-158 T 20-04-2016 APS56_RS10525 db901c744514e20882b6d985276d2740 559 PANTHER PTHR24220 8 294 3.8E-158 T 20-04-2016 APS56_RS10525 db901c744514e20882b6d985276d2740 559 PANTHER PTHR24220:SF586 327 437 3.8E-158 T 20-04-2016 APS56_RS10525 db901c744514e20882b6d985276d2740 559 PANTHER PTHR24220:SF586 8 294 3.8E-158 T 20-04-2016 APS56_RS10525 db901c744514e20882b6d985276d2740 559 SMART SM00382 336 529 3.0E-13 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS10525 db901c744514e20882b6d985276d2740 559 SMART SM00382 31 231 1.8E-17 T 20-04-2016 IPR003593 AAA+ ATPase domain APS56_RS10525 db901c744514e20882b6d985276d2740 559 SUPERFAMILY SSF52540 301 551 6.51E-70 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10525 db901c744514e20882b6d985276d2740 559 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS10525 db901c744514e20882b6d985276d2740 559 ProSitePatterns PS00211 ABC transporters family signature. 452 466 - T 20-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APS56_RS10525 db901c744514e20882b6d985276d2740 559 Gene3D G3DSA:3.40.50.300 6 255 2.3E-72 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10525 db901c744514e20882b6d985276d2740 559 Gene3D G3DSA:3.40.50.300 300 553 8.4E-76 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS10525 db901c744514e20882b6d985276d2740 559 Pfam PF00005 ABC transporter 23 181 6.9E-26 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS10525 db901c744514e20882b6d985276d2740 559 Pfam PF00005 ABC transporter 327 478 2.7E-32 T 20-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APS56_RS10525 db901c744514e20882b6d985276d2740 559 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 271 2.0E-6 T 20-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APS56_RS10525 db901c744514e20882b6d985276d2740 559 SUPERFAMILY SSF52540 6 253 1.78E-63 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03180 013fd8b74d7b15ff026fcde8532f955a 176 Gene3D G3DSA:3.40.50.360 1 172 2.5E-29 T 20-04-2016 IPR029039 Flavoprotein-like domain APS56_RS03180 013fd8b74d7b15ff026fcde8532f955a 176 PANTHER PTHR30543:SF6 1 172 4.2E-26 T 20-04-2016 APS56_RS03180 013fd8b74d7b15ff026fcde8532f955a 176 Pfam PF03358 NADPH-dependent FMN reductase 4 141 4.2E-25 T 20-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APS56_RS03180 013fd8b74d7b15ff026fcde8532f955a 176 PANTHER PTHR30543 1 172 4.2E-26 T 20-04-2016 APS56_RS03180 013fd8b74d7b15ff026fcde8532f955a 176 SUPERFAMILY SSF52218 3 169 2.0E-30 T 20-04-2016 IPR029039 Flavoprotein-like domain APS56_RS00165 7196385f14895a21c1de725319430e64 497 PANTHER PTHR10283 43 491 1.9E-143 T 20-04-2016 APS56_RS00165 7196385f14895a21c1de725319430e64 497 PANTHER PTHR10283:SF90 43 491 1.9E-143 T 20-04-2016 APS56_RS00165 7196385f14895a21c1de725319430e64 497 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 495 1.9E-124 T 20-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 APS56_RS03420 bb190b8b17019d1367664e1ce1b01f21 221 Gene3D G3DSA:3.40.50.720 2 217 1.8E-33 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS03420 bb190b8b17019d1367664e1ce1b01f21 221 PANTHER PTHR14097 3 221 5.4E-48 T 20-04-2016 APS56_RS03420 bb190b8b17019d1367664e1ce1b01f21 221 SUPERFAMILY SSF51735 1 212 6.5E-31 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS08185 1e63fa2472cd2f3a7ac61e887453b242 128 Pfam PF00380 Ribosomal protein S9/S16 8 128 1.7E-47 T 20-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APS56_RS08185 1e63fa2472cd2f3a7ac61e887453b242 128 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 128 29.069 T 20-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid APS56_RS08185 1e63fa2472cd2f3a7ac61e887453b242 128 Gene3D G3DSA:3.30.230.10 3 128 3.7E-50 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS08185 1e63fa2472cd2f3a7ac61e887453b242 128 SUPERFAMILY SSF54211 4 128 1.02E-46 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS08185 1e63fa2472cd2f3a7ac61e887453b242 128 PANTHER PTHR21569 8 128 4.5E-65 T 20-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APS56_RS06030 f0de447364f6eb4f6f6899e8c96b86d7 442 SUPERFAMILY SSF51126 11 227 1.82E-13 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS06030 f0de447364f6eb4f6f6899e8c96b86d7 442 SUPERFAMILY SSF51126 265 312 1.82E-13 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS04120 5b80e48d9dbb98edd9e219dedbd52d84 434 SUPERFAMILY SSF56349 126 341 4.32E-20 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS04120 5b80e48d9dbb98edd9e219dedbd52d84 434 Gene3D G3DSA:1.10.443.10 245 417 4.9E-13 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 Gene3D G3DSA:3.40.720.10 47 390 2.2E-104 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 ProSitePatterns PS00523 Sulfatases signature 1. 94 106 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 Pfam PF00884 Sulfatase 49 368 1.1E-69 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 PANTHER PTHR10342 313 487 4.9E-142 T 20-04-2016 APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 PANTHER PTHR10342:SF199 313 487 4.9E-142 T 20-04-2016 APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 PANTHER PTHR10342:SF199 15 294 4.9E-142 T 20-04-2016 APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 PANTHER PTHR10342 15 294 4.9E-142 T 20-04-2016 APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 SUPERFAMILY SSF53649 47 464 1.96E-121 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS05950 a3ae5891543cddeb815c28bbd0d2680b 623 Gene3D G3DSA:3.30.1120.10 412 466 5.2E-11 T 20-04-2016 APS56_RS16115 4196373a914c9f2ee713e8e9963ec046 130 Gene3D G3DSA:1.10.490.10 9 117 4.0E-15 T 20-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 APS56_RS16115 4196373a914c9f2ee713e8e9963ec046 130 SUPERFAMILY SSF46458 6 125 1.3E-23 T 20-04-2016 IPR009050 Globin-like APS56_RS12240 04883780a8f06858004175f4e920557c 83 Pfam PF11297 Protein of unknown function (DUF3098) 15 81 5.2E-34 T 20-04-2016 IPR021448 Protein of unknown function DUF3098 APS56_RS04690 103d493da8abf570a7c5d3b0c69d878c 1159 SUPERFAMILY SSF52540 214 331 4.91E-6 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS04690 103d493da8abf570a7c5d3b0c69d878c 1159 Gene3D G3DSA:3.40.50.300 210 349 2.7E-4 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02850 deb39fbc948a22ce2115f082f620a70a 200 Gene3D G3DSA:2.60.120.10 6 158 2.6E-35 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS02850 deb39fbc948a22ce2115f082f620a70a 200 PANTHER PTHR24567 16 196 2.2E-26 T 20-04-2016 APS56_RS02850 deb39fbc948a22ce2115f082f620a70a 200 Pfam PF00027 Cyclic nucleotide-binding domain 32 116 5.5E-14 T 20-04-2016 IPR000595 Cyclic nucleotide-binding domain APS56_RS02850 deb39fbc948a22ce2115f082f620a70a 200 SUPERFAMILY SSF51206 11 145 4.98E-25 T 20-04-2016 IPR018490 Cyclic nucleotide-binding-like APS56_RS09820 335503ef5e9b30d970c0870b00c3bda6 629 Pfam PF10566 Glycoside hydrolase 97 265 526 1.0E-52 T 20-04-2016 IPR019563 Glycosyl-hydrolase 97, catalytic domain APS56_RS09820 335503ef5e9b30d970c0870b00c3bda6 629 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 529 626 1.4E-23 T 20-04-2016 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain APS56_RS09820 335503ef5e9b30d970c0870b00c3bda6 629 SUPERFAMILY SSF51445 265 462 3.86E-12 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS09820 335503ef5e9b30d970c0870b00c3bda6 629 Gene3D G3DSA:3.20.20.70 287 383 4.4E-5 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS09820 335503ef5e9b30d970c0870b00c3bda6 629 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 25 260 3.6E-35 T 20-04-2016 IPR029486 Glycosyl-hydrolase 97, N-terminal domain APS56_RS09820 335503ef5e9b30d970c0870b00c3bda6 629 PANTHER PTHR35803 1 629 1.7E-111 T 20-04-2016 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 PRINTS PR00095 Anthranilate synthase component I signature 360 374 8.9E-16 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 PRINTS PR00095 Anthranilate synthase component I signature 266 279 8.9E-16 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 PRINTS PR00095 Anthranilate synthase component I signature 280 293 8.9E-16 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 PRINTS PR00095 Anthranilate synthase component I signature 375 389 8.9E-16 T 20-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 79 423 2.7E-99 T 20-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 Gene3D G3DSA:3.60.120.10 26 429 1.0E-113 T 20-04-2016 IPR005801 ADC synthase GO:0009058 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 PANTHER PTHR11236 79 429 4.1E-111 T 20-04-2016 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 Pfam PF00425 chorismate binding enzyme 164 420 5.6E-83 T 20-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 PANTHER PTHR11236:SF18 79 429 4.1E-111 T 20-04-2016 APS56_RS00850 9af6131d2cc806bf54da27911c1be6b2 430 SUPERFAMILY SSF56322 20 429 1.31E-108 T 20-04-2016 IPR005801 ADC synthase GO:0009058 APS56_RS14375 1a603a5f19fdb3c9213f91add61a1430 163 PANTHER PTHR37953 56 160 1.8E-25 T 20-04-2016 APS56_RS14375 1a603a5f19fdb3c9213f91add61a1430 163 Pfam PF02643 Uncharacterized ACR, COG1430 57 159 3.5E-30 T 20-04-2016 IPR003795 Protein of unknown function DUF192 APS56_RS14375 1a603a5f19fdb3c9213f91add61a1430 163 PANTHER PTHR37953:SF1 56 160 1.8E-25 T 20-04-2016 APS56_RS14355 c054fb1225b16ee49d10ec5022a182db 362 SUPERFAMILY SSF56436 43 355 3.77E-86 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS14355 c054fb1225b16ee49d10ec5022a182db 362 Pfam PF03781 Sulfatase-modifying factor enzyme 1 44 353 1.7E-82 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS14355 c054fb1225b16ee49d10ec5022a182db 362 Gene3D G3DSA:3.90.1580.10 39 356 1.3E-93 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS14355 c054fb1225b16ee49d10ec5022a182db 362 PANTHER PTHR23150 46 135 1.8E-91 T 20-04-2016 APS56_RS14355 c054fb1225b16ee49d10ec5022a182db 362 PANTHER PTHR23150 153 354 1.8E-91 T 20-04-2016 APS56_RS05105 93fe62c3d83919c94dac4d806d31d884 685 Pfam PF13899 Thioredoxin-like 529 590 7.5E-9 T 20-04-2016 APS56_RS05105 93fe62c3d83919c94dac4d806d31d884 685 Gene3D G3DSA:3.40.30.10 524 668 2.6E-39 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05105 93fe62c3d83919c94dac4d806d31d884 685 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 211 392 7.8E-14 T 20-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 APS56_RS05105 93fe62c3d83919c94dac4d806d31d884 685 PANTHER PTHR32234 194 588 5.8E-79 T 20-04-2016 APS56_RS05105 93fe62c3d83919c94dac4d806d31d884 685 PANTHER PTHR32234:SF0 194 588 5.8E-79 T 20-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 APS56_RS05105 93fe62c3d83919c94dac4d806d31d884 685 SUPERFAMILY SSF52833 520 589 5.85E-26 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05105 93fe62c3d83919c94dac4d806d31d884 685 SUPERFAMILY SSF52833 617 668 5.85E-26 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05105 93fe62c3d83919c94dac4d806d31d884 685 Pfam PF11412 Disulphide bond corrector protein DsbC 36 141 3.8E-6 T 20-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APS56_RS04790 676b450abe37a2dc6b75b09b06897e7d 943 Gene3D G3DSA:1.50.10.10 463 544 2.3E-6 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS04790 676b450abe37a2dc6b75b09b06897e7d 943 SUPERFAMILY SSF48208 422 544 2.79E-8 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS11360 4c797adccecf4310e1961e55810b3d8b 280 SUPERFAMILY SSF53474 13 279 1.79E-36 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS11360 4c797adccecf4310e1961e55810b3d8b 280 Pfam PF00561 alpha/beta hydrolase fold 31 156 1.7E-7 T 20-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APS56_RS11360 4c797adccecf4310e1961e55810b3d8b 280 Gene3D G3DSA:3.40.50.1820 5 257 9.5E-34 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS15615 bd73d4d4d18eddb50697247c33718a68 179 Pfam PF07700 Haem-NO-binding 2 160 1.4E-38 T 20-04-2016 IPR011644 Heme-NO binding GO:0020037 KEGG: 00230+4.6.1.2 APS56_RS15615 bd73d4d4d18eddb50697247c33718a68 179 Gene3D G3DSA:3.90.1520.10 1 176 2.4E-51 T 20-04-2016 APS56_RS15615 bd73d4d4d18eddb50697247c33718a68 179 SUPERFAMILY SSF111126 1 175 6.8E-39 T 20-04-2016 IPR024096 NO signalling/Golgi transport ligand-binding domain APS56_RS03740 de10fad48e189ab1a09a1d58fc96e038 375 Pfam PF11199 Protein of unknown function (DUF2891) 50 367 4.6E-135 T 20-04-2016 IPR021365 Protein of unknown function DUF2891 APS56_RS11110 d2a8e3b8ec6229f5ab8067671ab0f017 819 Gene3D G3DSA:2.60.40.10 466 515 2.6E-4 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS07260 13a7c18059857fe29225613ba29202b6 325 PANTHER PTHR12001 14 325 2.2E-89 T 20-04-2016 IPR017446 Polyprenyl synthetase-related APS56_RS07260 13a7c18059857fe29225613ba29202b6 325 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 98 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APS56_RS07260 13a7c18059857fe29225613ba29202b6 325 Pfam PF00348 Polyprenyl synthetase 32 275 6.8E-63 T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APS56_RS07260 13a7c18059857fe29225613ba29202b6 325 Gene3D G3DSA:1.10.600.10 4 325 9.4E-91 T 20-04-2016 IPR008949 Isoprenoid synthase domain APS56_RS07260 13a7c18059857fe29225613ba29202b6 325 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 20-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APS56_RS07260 13a7c18059857fe29225613ba29202b6 325 SUPERFAMILY SSF48576 3 324 1.02E-82 T 20-04-2016 IPR008949 Isoprenoid synthase domain APS56_RS15340 b4dcdb926980feaf7a166b35c81029f8 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 160 1.1E-21 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15340 b4dcdb926980feaf7a166b35c81029f8 169 Pfam PF04542 Sigma-70 region 2 11 75 6.3E-10 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15340 b4dcdb926980feaf7a166b35c81029f8 169 PANTHER PTHR30173 3 160 2.7E-29 T 20-04-2016 APS56_RS15340 b4dcdb926980feaf7a166b35c81029f8 169 SUPERFAMILY SSF88946 6 84 2.04E-13 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15340 b4dcdb926980feaf7a166b35c81029f8 169 SUPERFAMILY SSF88659 95 160 1.42E-13 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15340 b4dcdb926980feaf7a166b35c81029f8 169 Pfam PF08281 Sigma-70, region 4 105 155 1.9E-13 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15340 b4dcdb926980feaf7a166b35c81029f8 169 Gene3D G3DSA:1.10.1740.10 4 76 1.3E-13 T 20-04-2016 APS56_RS15340 b4dcdb926980feaf7a166b35c81029f8 169 Gene3D G3DSA:1.10.10.10 103 160 5.3E-17 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS15955 ff7de497026b42090e270cce1b76eb13 79 Gene3D G3DSA:1.10.1220.10 18 42 2.2E-4 T 20-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APS56_RS15955 ff7de497026b42090e270cce1b76eb13 79 SUPERFAMILY SSF47598 1 42 9.0E-7 T 20-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APS56_RS10630 b7b63f4387814a9bd82add194d7447bc 245 Pfam PF14125 Domain of unknown function (DUF4292) 36 242 2.0E-51 T 20-04-2016 IPR025634 Protein of unknown function DUF4292 APS56_RS15570 a9bfef12d0f5a6cba73a4c5bb552380a 312 Pfam PF08522 Domain of unknown function (DUF1735) 39 154 1.3E-15 T 20-04-2016 IPR013728 Domain of unknown function DUF1735 APS56_RS06485 c25889b572db93e8a003d47f2362912c 417 Pfam PF17116 Domain of unknown function (DUF5103) 32 312 3.0E-98 T 20-04-2016 IPR031345 Protein of unknown function DUF5103 APS56_RS06485 c25889b572db93e8a003d47f2362912c 417 SUPERFAMILY SSF49452 302 374 1.82E-5 T 20-04-2016 IPR013784 Carbohydrate-binding-like fold GO:0030246 APS56_RS00935 c2d71f5f74470f04897263f503763b46 476 SUPERFAMILY SSF55124 189 282 2.78E-5 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00935 c2d71f5f74470f04897263f503763b46 476 Pfam PF00301 Rubredoxin 424 469 2.3E-13 T 20-04-2016 IPR024935 Rubredoxin domain GO:0005506 APS56_RS00935 c2d71f5f74470f04897263f503763b46 476 Gene3D G3DSA:2.20.28.10 423 472 2.0E-15 T 20-04-2016 IPR004039 Rubredoxin-type fold APS56_RS00935 c2d71f5f74470f04897263f503763b46 476 Gene3D G3DSA:3.90.480.10 7 69 4.4E-7 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00935 c2d71f5f74470f04897263f503763b46 476 Gene3D G3DSA:3.90.480.10 208 282 4.4E-7 T 20-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APS56_RS00935 c2d71f5f74470f04897263f503763b46 476 SUPERFAMILY SSF57802 423 471 3.99E-13 T 20-04-2016 APS56_RS10565 0c0d159a932948dadfef5dc8119cfb31 357 Gene3D G3DSA:3.40.250.10 114 239 6.0E-36 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS10565 0c0d159a932948dadfef5dc8119cfb31 357 PANTHER PTHR22778:SF21 1 321 1.5E-96 T 20-04-2016 APS56_RS10565 0c0d159a932948dadfef5dc8119cfb31 357 SUPERFAMILY SSF52821 115 270 1.65E-27 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS10565 0c0d159a932948dadfef5dc8119cfb31 357 Hamap MF_00469 UPF0176 protein YceA [yceA]. 21 276 38.028 T 20-04-2016 IPR020936 Uncharacterised protein family UPF0176 APS56_RS10565 0c0d159a932948dadfef5dc8119cfb31 357 SMART SM00450 134 236 4.4E-24 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS10565 0c0d159a932948dadfef5dc8119cfb31 357 PANTHER PTHR22778 1 321 1.5E-96 T 20-04-2016 APS56_RS10565 0c0d159a932948dadfef5dc8119cfb31 357 Pfam PF00581 Rhodanese-like domain 135 231 2.6E-11 T 20-04-2016 IPR001763 Rhodanese-like domain APS56_RS10565 0c0d159a932948dadfef5dc8119cfb31 357 Pfam PF12368 Rhodanase C-terminal 245 307 1.4E-16 T 20-04-2016 IPR022111 Rhodanase, C-terminal APS56_RS08420 d63a9751ad114811a4e562129bc5f3fc 283 Gene3D G3DSA:3.40.390.10 70 277 6.1E-32 T 20-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APS56_RS08420 d63a9751ad114811a4e562129bc5f3fc 283 SUPERFAMILY SSF55486 81 277 1.46E-32 T 20-04-2016 APS56_RS08420 d63a9751ad114811a4e562129bc5f3fc 283 PANTHER PTHR30164 24 275 1.7E-24 T 20-04-2016 APS56_RS08420 d63a9751ad114811a4e562129bc5f3fc 283 Pfam PF06167 Glucose-regulated metallo-peptidase M90 59 274 1.7E-35 T 20-04-2016 IPR010384 MtfA family APS56_RS04590 25bfab438994830640e4d7a70c62c223 1029 SUPERFAMILY SSF51445 59 222 7.28E-5 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS04590 25bfab438994830640e4d7a70c62c223 1029 Gene3D G3DSA:3.20.20.80 334 371 2.6E-5 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS04590 25bfab438994830640e4d7a70c62c223 1029 Gene3D G3DSA:3.20.20.80 98 275 2.6E-5 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS04590 25bfab438994830640e4d7a70c62c223 1029 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 961 1029 7.8E-10 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS11895 8bc9f25d0b82efd5a78856caace0c113 192 TIGRFAM TIGR03512 GldD_lipo: gliding motility-associated lipoprotein GldD 6 192 6.6E-68 T 20-04-2016 IPR019850 Gliding motility-associated lipoprotein, GldD APS56_RS05935 9ca0af2a9c5ee3797d1a0c32360f74aa 531 SUPERFAMILY SSF52266 104 219 1.01E-64 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS05935 9ca0af2a9c5ee3797d1a0c32360f74aa 531 SUPERFAMILY SSF52266 287 482 1.01E-64 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS05935 9ca0af2a9c5ee3797d1a0c32360f74aa 531 PANTHER PTHR22901 1 530 2.6E-125 T 20-04-2016 APS56_RS05935 9ca0af2a9c5ee3797d1a0c32360f74aa 531 PANTHER PTHR22901:SF0 1 530 2.6E-125 T 20-04-2016 APS56_RS05935 9ca0af2a9c5ee3797d1a0c32360f74aa 531 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 104 411 6.0E-85 T 20-04-2016 IPR005181 Sialate O-acetylesterase domain APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 Gene3D G3DSA:3.20.20.80 38 347 4.0E-97 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 SUPERFAMILY SSF51445 37 347 4.48E-95 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 PRINTS PR00741 Glycosyl hydrolase family 29 signature 151 170 3.3E-15 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 PRINTS PR00741 Glycosyl hydrolase family 29 signature 105 121 3.3E-15 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 PRINTS PR00741 Glycosyl hydrolase family 29 signature 192 208 3.3E-15 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 PRINTS PR00741 Glycosyl hydrolase family 29 signature 297 318 3.3E-15 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 PRINTS PR00741 Glycosyl hydrolase family 29 signature 330 352 3.3E-15 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 PANTHER PTHR10030 1 386 4.1E-71 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 SMART SM00812 29 387 9.7E-121 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 PIRSF PIRSF001092 2 428 3.6E-122 T 20-04-2016 IPR016286 Alpha-L-fucosidase, metazoa-type GO:0004560|GO:0006004 KEGG: 00511+3.2.1.51 APS56_RS02950 c1391a272e3069557f07f6b4f890a07e 433 Pfam PF01120 Alpha-L-fucosidase 29 344 1.3E-98 T 20-04-2016 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51 APS56_RS09670 991e17b669c6d688e615207eabcc37b2 525 SUPERFAMILY SSF75005 369 406 1.87E-11 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09670 991e17b669c6d688e615207eabcc37b2 525 SUPERFAMILY SSF75005 115 123 1.87E-11 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09670 991e17b669c6d688e615207eabcc37b2 525 SUPERFAMILY SSF75005 166 318 1.87E-11 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09670 991e17b669c6d688e615207eabcc37b2 525 Gene3D G3DSA:2.115.10.20 364 431 5.4E-4 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09670 991e17b669c6d688e615207eabcc37b2 525 Gene3D G3DSA:2.115.10.20 165 286 2.5E-7 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS09670 991e17b669c6d688e615207eabcc37b2 525 Gene3D G3DSA:2.115.10.20 105 126 2.5E-7 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS14910 07f182253ed673445ad6620f2202a41d 150 PIRSF PIRSF029256 2 149 3.9E-52 T 20-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APS56_RS14910 07f182253ed673445ad6620f2202a41d 150 PANTHER PTHR12029:SF31 3 144 3.0E-52 T 20-04-2016 APS56_RS14910 07f182253ed673445ad6620f2202a41d 150 Gene3D G3DSA:3.40.1280.10 2 147 1.3E-51 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS14910 07f182253ed673445ad6620f2202a41d 150 SUPERFAMILY SSF75217 3 147 2.75E-36 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS14910 07f182253ed673445ad6620f2202a41d 150 Pfam PF00588 SpoU rRNA Methylase family 3 143 5.6E-30 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APS56_RS14910 07f182253ed673445ad6620f2202a41d 150 PANTHER PTHR12029 3 144 3.0E-52 T 20-04-2016 APS56_RS14910 07f182253ed673445ad6620f2202a41d 150 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 149 29.946 T 20-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APS56_RS05000 8ba84c39ca37a3cd67e6cf4cb433173f 163 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 149 4.5E-25 T 20-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APS56_RS05000 8ba84c39ca37a3cd67e6cf4cb433173f 163 PANTHER PTHR11124 1 133 1.4E-16 T 20-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APS56_RS05000 8ba84c39ca37a3cd67e6cf4cb433173f 163 Gene3D G3DSA:3.60.21.10 3 155 2.4E-26 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS05000 8ba84c39ca37a3cd67e6cf4cb433173f 163 SUPERFAMILY SSF56300 1 160 1.74E-27 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS05000 8ba84c39ca37a3cd67e6cf4cb433173f 163 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 3 154 2.6E-18 T 20-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APS56_RS00845 1768e93073995cbeb6544f6678f5ccda 296 PANTHER PTHR11122 194 295 3.8E-43 T 20-04-2016 APS56_RS00845 1768e93073995cbeb6544f6678f5ccda 296 PANTHER PTHR11122 7 164 3.8E-43 T 20-04-2016 APS56_RS00845 1768e93073995cbeb6544f6678f5ccda 296 PANTHER PTHR11122:SF14 194 295 3.8E-43 T 20-04-2016 APS56_RS00845 1768e93073995cbeb6544f6678f5ccda 296 PANTHER PTHR11122:SF14 7 164 3.8E-43 T 20-04-2016 APS56_RS00845 1768e93073995cbeb6544f6678f5ccda 296 SUPERFAMILY SSF74650 2 290 9.42E-45 T 20-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APS56_RS00845 1768e93073995cbeb6544f6678f5ccda 296 Pfam PF01263 Aldose 1-epimerase 2 242 8.5E-22 T 20-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APS56_RS00845 1768e93073995cbeb6544f6678f5ccda 296 Gene3D G3DSA:2.70.98.10 2 260 3.9E-18 T 20-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APS56_RS14860 c778d5920cc715cf13e944dd77723b4a 472 PANTHER PTHR10366:SF401 2 237 2.4E-74 T 20-04-2016 APS56_RS14860 c778d5920cc715cf13e944dd77723b4a 472 PANTHER PTHR10366:SF401 258 303 2.4E-74 T 20-04-2016 APS56_RS14860 c778d5920cc715cf13e944dd77723b4a 472 Pfam PF11066 Protein of unknown function (DUF2867) 349 465 4.5E-28 T 20-04-2016 IPR021295 Protein of unknown function DUF2867 APS56_RS14860 c778d5920cc715cf13e944dd77723b4a 472 SUPERFAMILY SSF51735 1 284 1.47E-38 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14860 c778d5920cc715cf13e944dd77723b4a 472 Pfam PF13460 NAD(P)H-binding 7 121 5.4E-11 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14860 c778d5920cc715cf13e944dd77723b4a 472 Gene3D G3DSA:3.40.50.720 1 209 4.0E-29 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS14860 c778d5920cc715cf13e944dd77723b4a 472 PANTHER PTHR10366 2 237 2.4E-74 T 20-04-2016 APS56_RS14860 c778d5920cc715cf13e944dd77723b4a 472 PANTHER PTHR10366 258 303 2.4E-74 T 20-04-2016 APS56_RS10950 05c55f58691b6f7a63188835f406ff93 449 Gene3D G3DSA:3.80.10.10 37 261 2.0E-27 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS10950 05c55f58691b6f7a63188835f406ff93 449 SUPERFAMILY SSF52058 24 267 6.46E-22 T 20-04-2016 IPR032675 Leucine-rich repeat domain, L domain-like APS56_RS10950 05c55f58691b6f7a63188835f406ff93 449 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 368 449 4.9E-30 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS10950 05c55f58691b6f7a63188835f406ff93 449 Pfam PF13585 C-terminal domain of CHU protein family 367 439 2.2E-13 T 20-04-2016 APS56_RS13030 98f299c5fa9742acfc37525476b434b4 126 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 24 102 2.1E-19 T 20-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 APS56_RS14210 2201ff4499edd4788e7e071627cbcf5a 121 Gene3D G3DSA:1.10.8.290 7 120 6.9E-52 T 20-04-2016 IPR023204 SP1917 domain APS56_RS14210 2201ff4499edd4788e7e071627cbcf5a 121 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 10 119 6.3E-50 T 20-04-2016 IPR014580 Uncharacterised conserved protein UCP033199 APS56_RS14210 2201ff4499edd4788e7e071627cbcf5a 121 PIRSF PIRSF033199 7 120 1.2E-45 T 20-04-2016 IPR014580 Uncharacterised conserved protein UCP033199 APS56_RS13230 f226cce284099021a631764a14946524 435 PANTHER PTHR41339 42 369 5.0E-20 T 20-04-2016 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 Pfam PF01084 Ribosomal protein S18 40 90 1.3E-24 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 95 20.983 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 PANTHER PTHR13479 30 93 3.5E-28 T 20-04-2016 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 PRINTS PR00974 Ribosomal protein S18 family signature 68 82 1.9E-18 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 PRINTS PR00974 Ribosomal protein S18 family signature 50 60 1.9E-18 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 PRINTS PR00974 Ribosomal protein S18 family signature 82 92 1.9E-18 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 PRINTS PR00974 Ribosomal protein S18 family signature 60 67 1.9E-18 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 42 93 5.0E-20 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 ProSitePatterns PS00057 Ribosomal protein S18 signature. 43 66 - T 20-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 Gene3D G3DSA:4.10.640.10 30 95 1.9E-32 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 SUPERFAMILY SSF46911 27 95 1.96E-27 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS03860 4b05b85690f069fb26dd45a8162395ea 98 TIGRFAM TIGR00165 S18: ribosomal protein bS18 28 95 2.3E-31 T 20-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APS56_RS08600 b87d9de1d06bb248f6da1341786366ae 459 SUPERFAMILY SSF48452 286 378 1.18E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08600 b87d9de1d06bb248f6da1341786366ae 459 SUPERFAMILY SSF48452 35 63 1.18E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08600 b87d9de1d06bb248f6da1341786366ae 459 Gene3D G3DSA:1.25.40.10 300 424 2.9E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08600 b87d9de1d06bb248f6da1341786366ae 459 Gene3D G3DSA:1.25.40.10 36 62 2.9E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08600 b87d9de1d06bb248f6da1341786366ae 459 SMART SM00028 297 330 1.3 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS08600 b87d9de1d06bb248f6da1341786366ae 459 SMART SM00028 334 367 0.023 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS12640 7e5471b59751d219ce22af3803880884 339 SMART SM00354 4 74 9.8E-27 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS12640 7e5471b59751d219ce22af3803880884 339 PANTHER PTHR30146 4 335 3.5E-113 T 20-04-2016 APS56_RS12640 7e5471b59751d219ce22af3803880884 339 SUPERFAMILY SSF47413 3 62 6.56E-15 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS12640 7e5471b59751d219ce22af3803880884 339 SUPERFAMILY SSF53822 65 334 1.9E-72 T 20-04-2016 IPR028082 Periplasmic binding protein-like I APS56_RS12640 7e5471b59751d219ce22af3803880884 339 Gene3D G3DSA:3.40.50.2300 178 315 5.9E-46 T 20-04-2016 APS56_RS12640 7e5471b59751d219ce22af3803880884 339 Gene3D G3DSA:1.10.260.40 3 54 1.3E-19 T 20-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APS56_RS12640 7e5471b59751d219ce22af3803880884 339 Pfam PF13377 Periplasmic binding protein-like domain 174 334 1.3E-33 T 20-04-2016 APS56_RS12640 7e5471b59751d219ce22af3803880884 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 2.1E-13 T 20-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APS56_RS12640 7e5471b59751d219ce22af3803880884 339 Gene3D G3DSA:3.40.50.2300 55 177 7.3E-46 T 20-04-2016 APS56_RS12270 2112ad165c14b6fadf20ce068215f099 233 PANTHER PTHR36434 1 233 1.7E-79 T 20-04-2016 APS56_RS12270 2112ad165c14b6fadf20ce068215f099 233 Pfam PF04298 Putative neutral zinc metallopeptidase 4 226 4.0E-88 T 20-04-2016 IPR007395 Putative neutral zinc metallopeptidase APS56_RS15985 dc0cc94ddb41de8e23c6108617d5615c 197 SUPERFAMILY SSF48425 4 54 5.1E-5 T 20-04-2016 IPR000904 Sec7 domain GO:0005086|GO:0032012 APS56_RS09730 98763a68cf30f3d338817afb95bf1d79 506 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 105 396 3.1E-69 T 20-04-2016 IPR005181 Sialate O-acetylesterase domain APS56_RS09730 98763a68cf30f3d338817afb95bf1d79 506 SUPERFAMILY SSF52266 104 199 2.47E-52 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS09730 98763a68cf30f3d338817afb95bf1d79 506 SUPERFAMILY SSF52266 247 456 2.47E-52 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS09730 98763a68cf30f3d338817afb95bf1d79 506 PANTHER PTHR22901:SF0 292 506 2.6E-121 T 20-04-2016 APS56_RS09730 98763a68cf30f3d338817afb95bf1d79 506 PANTHER PTHR22901:SF0 3 275 2.6E-121 T 20-04-2016 APS56_RS09730 98763a68cf30f3d338817afb95bf1d79 506 PANTHER PTHR22901 292 506 2.6E-121 T 20-04-2016 APS56_RS09730 98763a68cf30f3d338817afb95bf1d79 506 PANTHER PTHR22901 3 275 2.6E-121 T 20-04-2016 APS56_RS04845 55b552673f93ae0b1992c76605bb3473 813 Gene3D G3DSA:2.70.98.50 24 435 3.9E-118 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS04845 55b552673f93ae0b1992c76605bb3473 813 PANTHER PTHR31084 25 813 1.3E-236 T 20-04-2016 APS56_RS04845 55b552673f93ae0b1992c76605bb3473 813 PANTHER PTHR31084:SF0 25 813 1.3E-236 T 20-04-2016 APS56_RS04845 55b552673f93ae0b1992c76605bb3473 813 SUPERFAMILY SSF48208 366 795 2.47E-79 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS04845 55b552673f93ae0b1992c76605bb3473 813 SUPERFAMILY SSF48208 301 334 2.47E-79 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS04845 55b552673f93ae0b1992c76605bb3473 813 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 25 294 1.5E-61 T 20-04-2016 IPR027414 Glycosyl hydrolase family, N-terminal domain KEGG: 00511+3.2.1.51 APS56_RS04845 55b552673f93ae0b1992c76605bb3473 813 PIRSF PIRSF007663 13 812 3.2E-232 T 20-04-2016 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51 APS56_RS04035 7e553ead2a60a3ae47eb4cc8e30fa605 358 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 354 1.9E-63 T 20-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APS56_RS04035 7e553ead2a60a3ae47eb4cc8e30fa605 358 PANTHER PTHR33529 1 358 2.5E-61 T 20-04-2016 APS56_RS04035 7e553ead2a60a3ae47eb4cc8e30fa605 358 PANTHER PTHR33529:SF1 1 358 2.5E-61 T 20-04-2016 APS56_RS06740 49361256aa8dd4a250786a1e9d408a08 160 Gene3D G3DSA:3.40.140.10 15 159 1.5E-37 T 20-04-2016 APS56_RS06740 49361256aa8dd4a250786a1e9d408a08 160 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 25 126 7.9E-16 T 20-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APS56_RS06740 49361256aa8dd4a250786a1e9d408a08 160 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 26 158 1.5E-35 T 20-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APS56_RS06740 49361256aa8dd4a250786a1e9d408a08 160 SUPERFAMILY SSF53927 20 158 2.01E-34 T 20-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APS56_RS06740 49361256aa8dd4a250786a1e9d408a08 160 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 73 119 - T 20-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APS56_RS06740 49361256aa8dd4a250786a1e9d408a08 160 PANTHER PTHR11644 18 155 2.0E-33 T 20-04-2016 APS56_RS06470 ab9948796c3f78d83210dd7a7ed10ed2 263 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 263 25.81 T 20-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APS56_RS06470 ab9948796c3f78d83210dd7a7ed10ed2 263 Pfam PF04205 FMN-binding domain 151 248 6.1E-14 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APS56_RS06470 ab9948796c3f78d83210dd7a7ed10ed2 263 PANTHER PTHR37838:SF1 1 263 1.1E-45 T 20-04-2016 APS56_RS06470 ab9948796c3f78d83210dd7a7ed10ed2 263 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 257 4.3E-55 T 20-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APS56_RS06470 ab9948796c3f78d83210dd7a7ed10ed2 263 PIRSF PIRSF009437 1 263 1.5E-48 T 20-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APS56_RS06470 ab9948796c3f78d83210dd7a7ed10ed2 263 SMART SM00900 151 253 1.4E-15 T 20-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APS56_RS06470 ab9948796c3f78d83210dd7a7ed10ed2 263 PANTHER PTHR37838 1 263 1.1E-45 T 20-04-2016 APS56_RS03400 a9e23516ad475432f358e572ff08f0b2 261 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 129 145 - T 20-04-2016 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS03400 a9e23516ad475432f358e572ff08f0b2 261 Gene3D G3DSA:3.10.200.10 35 257 4.6E-60 T 20-04-2016 IPR001148 Alpha carbonic anhydrase APS56_RS03400 a9e23516ad475432f358e572ff08f0b2 261 PANTHER PTHR18952 24 261 2.8E-65 T 20-04-2016 IPR023561 Carbonic anhydrase, alpha-class APS56_RS03400 a9e23516ad475432f358e572ff08f0b2 261 SMART SM01057 37 261 3.2E-71 T 20-04-2016 IPR001148 Alpha carbonic anhydrase APS56_RS03400 a9e23516ad475432f358e572ff08f0b2 261 SUPERFAMILY SSF51069 35 260 4.84E-65 T 20-04-2016 IPR001148 Alpha carbonic anhydrase APS56_RS03400 a9e23516ad475432f358e572ff08f0b2 261 Pfam PF00194 Eukaryotic-type carbonic anhydrase 36 259 1.6E-46 T 20-04-2016 IPR001148 Alpha carbonic anhydrase APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 SMART SM01018 323 406 3.1E-41 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 SUPERFAMILY SSF56507 569 888 2.88E-113 T 20-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 TIGRFAM TIGR02082 metH: methionine synthase 5 857 0.0 T 20-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 606 874 2.1E-115 T 20-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 Gene3D G3DSA:3.10.196.10 625 889 2.1E-99 T 20-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 Pfam PF02607 B12 binding domain 326 398 3.3E-24 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 SUPERFAMILY SSF51717 25 299 5.36E-84 T 20-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 SUPERFAMILY SSF52242 410 560 3.01E-43 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 Gene3D G3DSA:1.10.1240.10 318 403 9.5E-36 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 Gene3D G3DSA:3.40.50.280 414 560 7.0E-60 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 PIRSF PIRSF000381 1 861 0.0 T 20-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 Pfam PF02310 B12 binding domain 415 508 8.9E-18 T 20-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 Pfam PF00809 Pterin binding enzyme 29 267 5.5E-55 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 SUPERFAMILY SSF47644 318 405 9.68E-28 T 20-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APS56_RS07360 47dbaac5151c27a76346e85da3528327 891 Gene3D G3DSA:3.20.20.20 25 305 2.3E-109 T 20-04-2016 IPR000489 Pterin-binding domain GO:0042558 APS56_RS09895 30da4c5d67bfef83e3ab35d11aa74f7f 462 SUPERFAMILY SSF53649 14 451 6.4E-106 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09895 30da4c5d67bfef83e3ab35d11aa74f7f 462 PANTHER PTHR10342:SF207 1 451 3.1E-120 T 20-04-2016 APS56_RS09895 30da4c5d67bfef83e3ab35d11aa74f7f 462 Gene3D G3DSA:3.30.1120.10 393 451 7.7E-9 T 20-04-2016 APS56_RS09895 30da4c5d67bfef83e3ab35d11aa74f7f 462 Gene3D G3DSA:3.40.720.10 13 381 3.0E-89 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS09895 30da4c5d67bfef83e3ab35d11aa74f7f 462 PANTHER PTHR10342 1 451 3.1E-120 T 20-04-2016 APS56_RS09895 30da4c5d67bfef83e3ab35d11aa74f7f 462 Pfam PF00884 Sulfatase 16 362 8.9E-56 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS05310 c6c840bd16dad5de9418a5248b7f5088 256 SUPERFAMILY SSF52540 3 124 1.1E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS05310 c6c840bd16dad5de9418a5248b7f5088 256 SUPERFAMILY SSF52540 173 237 1.1E-10 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS13785 83ceda0384df79b6e7614a42af2089be 131 PANTHER PTHR30558:SF3 1 131 1.9E-24 T 20-04-2016 APS56_RS13785 83ceda0384df79b6e7614a42af2089be 131 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 127 7.7E-26 T 20-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APS56_RS13785 83ceda0384df79b6e7614a42af2089be 131 PANTHER PTHR30558 1 131 1.9E-24 T 20-04-2016 APS56_RS10105 6e1e86d7f535824a18c5315de62b7492 611 PANTHER PTHR33307 348 587 4.6E-17 T 20-04-2016 APS56_RS10105 6e1e86d7f535824a18c5315de62b7492 611 Gene3D G3DSA:2.60.120.260 33 79 2.1E-4 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS10105 6e1e86d7f535824a18c5315de62b7492 611 Pfam PF05592 Bacterial alpha-L-rhamnosidase 38 575 1.8E-66 T 20-04-2016 IPR008902 Bacterial alpha-L-rhamnosidase APS56_RS10105 6e1e86d7f535824a18c5315de62b7492 611 SUPERFAMILY SSF48208 168 276 3.61E-35 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS10105 6e1e86d7f535824a18c5315de62b7492 611 SUPERFAMILY SSF48208 335 574 3.61E-35 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS01995 f63b8e52168ca09180b5d5244688218f 176 SUPERFAMILY SSF88946 4 85 2.39E-9 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01995 f63b8e52168ca09180b5d5244688218f 176 PANTHER PTHR30173 2 160 6.3E-25 T 20-04-2016 APS56_RS01995 f63b8e52168ca09180b5d5244688218f 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 161 2.9E-22 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01995 f63b8e52168ca09180b5d5244688218f 176 SUPERFAMILY SSF88659 84 164 3.74E-16 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01995 f63b8e52168ca09180b5d5244688218f 176 Pfam PF04542 Sigma-70 region 2 7 73 6.2E-5 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01995 f63b8e52168ca09180b5d5244688218f 176 Gene3D G3DSA:1.10.1740.10 3 90 1.6E-8 T 20-04-2016 APS56_RS01995 f63b8e52168ca09180b5d5244688218f 176 Pfam PF08281 Sigma-70, region 4 108 159 1.8E-15 T 20-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS01995 f63b8e52168ca09180b5d5244688218f 176 Gene3D G3DSA:1.10.10.10 106 161 1.7E-15 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02385 5da2c89682b86b0c2ca7c8cd13c34787 230 Gene3D G3DSA:3.40.630.40 2 226 1.2E-45 T 20-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APS56_RS02385 5da2c89682b86b0c2ca7c8cd13c34787 230 SUPERFAMILY SSF53187 2 225 4.71E-41 T 20-04-2016 APS56_RS02385 5da2c89682b86b0c2ca7c8cd13c34787 230 Pfam PF05013 N-formylglutamate amidohydrolase 2 203 3.4E-19 T 20-04-2016 IPR007709 N-formylglutamate amidohydrolase APS56_RS12830 4345dd0451a676250b787342dfcc1eee 288 SUPERFAMILY SSF103481 184 285 6.93E-18 T 20-04-2016 APS56_RS12830 4345dd0451a676250b787342dfcc1eee 288 Pfam PF00892 EamA-like transporter family 149 278 2.9E-23 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS12830 4345dd0451a676250b787342dfcc1eee 288 Pfam PF00892 EamA-like transporter family 10 137 2.7E-13 T 20-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APS56_RS12830 4345dd0451a676250b787342dfcc1eee 288 PANTHER PTHR22911 9 287 1.2E-48 T 20-04-2016 APS56_RS12830 4345dd0451a676250b787342dfcc1eee 288 SUPERFAMILY SSF103481 39 138 2.09E-10 T 20-04-2016 APS56_RS09020 5d96f65cce6c775692e6aaa3d42047ad 90 Gene3D G3DSA:3.40.630.30 2 88 2.3E-18 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS09020 5d96f65cce6c775692e6aaa3d42047ad 90 SUPERFAMILY SSF55729 2 88 2.55E-16 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS09020 5d96f65cce6c775692e6aaa3d42047ad 90 Pfam PF14542 GCN5-related N-acetyl-transferase 11 86 9.4E-15 T 20-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase APS56_RS08690 def8e59cb18ffa67abde7929e0c2e5be 234 PANTHER PTHR30399:SF1 3 230 3.4E-42 T 20-04-2016 APS56_RS08690 def8e59cb18ffa67abde7929e0c2e5be 234 Pfam PF01863 Protein of unknown function DUF45 22 231 7.2E-60 T 20-04-2016 IPR002725 Protein of unknown function DUF45 APS56_RS08690 def8e59cb18ffa67abde7929e0c2e5be 234 PANTHER PTHR30399 3 230 3.4E-42 T 20-04-2016 APS56_RS08690 def8e59cb18ffa67abde7929e0c2e5be 234 Gene3D G3DSA:3.10.20.90 26 71 4.4E-4 T 20-04-2016 APS56_RS09550 f6cc1aacb5948ce7942e75d74c1646a1 319 Gene3D G3DSA:3.90.1580.10 27 309 3.9E-61 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS09550 f6cc1aacb5948ce7942e75d74c1646a1 319 SUPERFAMILY SSF56436 37 301 3.77E-53 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS09550 f6cc1aacb5948ce7942e75d74c1646a1 319 PANTHER PTHR23150:SF19 26 314 4.1E-56 T 20-04-2016 APS56_RS09550 f6cc1aacb5948ce7942e75d74c1646a1 319 PANTHER PTHR23150 26 314 4.1E-56 T 20-04-2016 APS56_RS09550 f6cc1aacb5948ce7942e75d74c1646a1 319 Pfam PF03781 Sulfatase-modifying factor enzyme 1 39 275 8.8E-42 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS00285 ec46221179306eb25cfcc9d2880e130d 224 PANTHER PTHR11040:SF57 4 220 3.5E-13 T 20-04-2016 APS56_RS00285 ec46221179306eb25cfcc9d2880e130d 224 PANTHER PTHR11040 4 220 3.5E-13 T 20-04-2016 APS56_RS00285 ec46221179306eb25cfcc9d2880e130d 224 Pfam PF02535 ZIP Zinc transporter 83 224 8.7E-14 T 20-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APS56_RS07935 c7502f331d9f2f5c20a04a24d61ca30c 351 Gene3D G3DSA:3.20.20.70 47 348 3.3E-28 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS07935 c7502f331d9f2f5c20a04a24d61ca30c 351 TIGRFAM TIGR04167 rSAM_SeCys: radical SAM/Cys-rich domain protein 48 349 1.8E-132 T 20-04-2016 IPR026351 Radical SAM/Cys-rich domain protein APS56_RS07935 c7502f331d9f2f5c20a04a24d61ca30c 351 SUPERFAMILY SSF102114 52 346 1.06E-38 T 20-04-2016 APS56_RS07935 c7502f331d9f2f5c20a04a24d61ca30c 351 Pfam PF12345 Protein of unknown function (DUF3641) 216 348 2.7E-55 T 20-04-2016 IPR024521 Domain of unknown function DUF3641 APS56_RS07935 c7502f331d9f2f5c20a04a24d61ca30c 351 PANTHER PTHR11228 1 343 8.6E-115 T 20-04-2016 APS56_RS07935 c7502f331d9f2f5c20a04a24d61ca30c 351 PANTHER PTHR11228:SF20 1 343 8.6E-115 T 20-04-2016 APS56_RS07935 c7502f331d9f2f5c20a04a24d61ca30c 351 Pfam PF04055 Radical SAM superfamily 59 196 7.8E-8 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS09520 ade84e37d1b9ea9cf02a542603b60acd 113 Pfam PF05154 TM2 domain 39 91 2.5E-15 T 20-04-2016 IPR007829 TM2 domain APS56_RS02800 5a0522c9cd2408e43234631b613e19ad 209 PANTHER PTHR31527:SF0 1 193 5.2E-52 T 20-04-2016 APS56_RS02800 5a0522c9cd2408e43234631b613e19ad 209 Pfam PF09347 Domain of unknown function (DUF1989) 6 170 8.1E-53 T 20-04-2016 IPR018959 Domain of unknown function DUF1989 APS56_RS02800 5a0522c9cd2408e43234631b613e19ad 209 PANTHER PTHR31527 1 193 5.2E-52 T 20-04-2016 APS56_RS11560 8628c8812488dbb68736e98721db3e0d 712 Gene3D G3DSA:2.170.130.10 33 158 3.3E-31 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS11560 8628c8812488dbb68736e98721db3e0d 712 SUPERFAMILY SSF56935 36 709 5.49E-60 T 20-04-2016 APS56_RS11560 8628c8812488dbb68736e98721db3e0d 712 Gene3D G3DSA:2.40.170.20 159 708 1.2E-37 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS11560 8628c8812488dbb68736e98721db3e0d 712 PANTHER PTHR32552 8 342 6.7E-19 T 20-04-2016 APS56_RS11560 8628c8812488dbb68736e98721db3e0d 712 PANTHER PTHR32552 485 509 6.7E-19 T 20-04-2016 APS56_RS11560 8628c8812488dbb68736e98721db3e0d 712 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 156 2.7E-19 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS02505 5c4862fc28f0fcb7b33fd3a2ef6cdd47 118 Pfam PF12681 Glyoxalase-like domain 8 113 7.8E-13 T 20-04-2016 IPR025870 Glyoxalase-like domain APS56_RS02505 5c4862fc28f0fcb7b33fd3a2ef6cdd47 118 SUPERFAMILY SSF54593 4 115 5.64E-23 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS02505 5c4862fc28f0fcb7b33fd3a2ef6cdd47 118 Gene3D G3DSA:3.10.180.10 3 116 7.7E-28 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS03340 b41e3c48259ee1d0d3d8c00a289a67fa 820 SUPERFAMILY SSF56935 113 820 1.51E-51 T 20-04-2016 APS56_RS03340 b41e3c48259ee1d0d3d8c00a289a67fa 820 Gene3D G3DSA:2.170.130.10 119 223 2.0E-7 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS03340 b41e3c48259ee1d0d3d8c00a289a67fa 820 Gene3D G3DSA:2.60.40.1120 25 112 5.8E-11 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS03340 b41e3c48259ee1d0d3d8c00a289a67fa 820 SUPERFAMILY SSF49464 25 110 1.96E-12 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS03340 b41e3c48259ee1d0d3d8c00a289a67fa 820 PANTHER PTHR30069 5 290 2.7E-14 T 20-04-2016 APS56_RS03340 b41e3c48259ee1d0d3d8c00a289a67fa 820 Pfam PF07715 TonB-dependent Receptor Plug Domain 124 216 1.5E-8 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS03340 b41e3c48259ee1d0d3d8c00a289a67fa 820 Pfam PF13715 CarboxypepD_reg-like domain 26 109 2.0E-9 T 20-04-2016 APS56_RS04255 f7b8b2e452fd4aed6a438e3dabec2d3b 150 Pfam PF07606 Protein of unknown function (DUF1569) 5 148 2.5E-6 T 20-04-2016 IPR011463 Protein of unknown function DUF1569 APS56_RS04255 f7b8b2e452fd4aed6a438e3dabec2d3b 150 Gene3D G3DSA:1.20.120.450 11 147 4.0E-5 T 20-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase APS56_RS15925 f9cfaa377ffcdfa6df9fd28e951e88c3 245 SUPERFAMILY SSF52172 1 127 3.7E-21 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS15925 f9cfaa377ffcdfa6df9fd28e951e88c3 245 SMART SM00448 2 111 7.4E-12 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15925 f9cfaa377ffcdfa6df9fd28e951e88c3 245 SMART SM00850 149 243 3.5E-18 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS15925 f9cfaa377ffcdfa6df9fd28e951e88c3 245 Pfam PF00072 Response regulator receiver domain 4 111 1.4E-14 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS15925 f9cfaa377ffcdfa6df9fd28e951e88c3 245 Gene3D G3DSA:3.40.50.2300 1 122 3.3E-23 T 20-04-2016 APS56_RS15925 f9cfaa377ffcdfa6df9fd28e951e88c3 245 PANTHER PTHR26402 2 146 6.7E-19 T 20-04-2016 APS56_RS15925 f9cfaa377ffcdfa6df9fd28e951e88c3 245 Pfam PF04397 LytTr DNA-binding domain 153 240 1.0E-13 T 20-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APS56_RS15925 f9cfaa377ffcdfa6df9fd28e951e88c3 245 Gene3D G3DSA:2.40.50.40 141 210 1.3E-15 T 20-04-2016 APS56_RS09750 669a1400f6a5d2d9e0c6b29df2e09739 187 Gene3D G3DSA:3.40.50.1110 2 186 9.9E-41 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS09750 669a1400f6a5d2d9e0c6b29df2e09739 187 PANTHER PTHR30383 3 186 1.2E-15 T 20-04-2016 APS56_RS09750 669a1400f6a5d2d9e0c6b29df2e09739 187 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 3 176 3.7E-26 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS09750 669a1400f6a5d2d9e0c6b29df2e09739 187 SUPERFAMILY SSF52266 2 186 1.05E-32 T 20-04-2016 IPR013830 SGNH hydrolase-type esterase domain APS56_RS15585 07d8c623b3534c9a179d536b762626a6 208 Gene3D G3DSA:1.10.1740.10 7 95 1.9E-10 T 20-04-2016 APS56_RS15585 07d8c623b3534c9a179d536b762626a6 208 PANTHER PTHR30173 1 204 4.0E-16 T 20-04-2016 APS56_RS15585 07d8c623b3534c9a179d536b762626a6 208 Pfam PF04542 Sigma-70 region 2 24 91 5.2E-5 T 20-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15585 07d8c623b3534c9a179d536b762626a6 208 SUPERFAMILY SSF88946 5 94 1.02E-10 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15585 07d8c623b3534c9a179d536b762626a6 208 SUPERFAMILY SSF88659 99 183 1.07E-8 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS15585 07d8c623b3534c9a179d536b762626a6 208 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 180 9.9E-16 T 20-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS10920 7cae7330a5a854752cf923ee3adaa377 526 Pfam PF07695 7TM diverse intracellular signalling 177 377 3.1E-16 T 20-04-2016 IPR011623 7TM-DISM receptor, extracellular domain, type 1 APS56_RS10920 7cae7330a5a854752cf923ee3adaa377 526 Gene3D G3DSA:1.10.10.10 467 519 5.6E-10 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS10920 7cae7330a5a854752cf923ee3adaa377 526 Pfam PF07696 7TMR-DISM extracellular 2 50 153 6.0E-7 T 20-04-2016 IPR011622 7TM-DISM receptor, extracellular domain, type 2 APS56_RS10920 7cae7330a5a854752cf923ee3adaa377 526 Pfam PF00196 Bacterial regulatory proteins, luxR family 469 522 1.4E-8 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS10920 7cae7330a5a854752cf923ee3adaa377 526 SUPERFAMILY SSF46894 457 520 2.07E-10 T 20-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APS56_RS10920 7cae7330a5a854752cf923ee3adaa377 526 SMART SM00421 466 523 8.7E-5 T 20-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APS56_RS09155 2bc4982c4f25742155b7a37003e576c2 190 SUPERFAMILY SSF82153 55 188 2.22E-31 T 20-04-2016 IPR000782 FAS1 domain APS56_RS09155 2bc4982c4f25742155b7a37003e576c2 190 PANTHER PTHR10900 44 190 6.8E-31 T 20-04-2016 APS56_RS09155 2bc4982c4f25742155b7a37003e576c2 190 Pfam PF02469 Fasciclin domain 66 187 2.6E-26 T 20-04-2016 IPR000782 FAS1 domain APS56_RS09155 2bc4982c4f25742155b7a37003e576c2 190 SMART SM00554 91 188 1.2E-20 T 20-04-2016 IPR000782 FAS1 domain APS56_RS09155 2bc4982c4f25742155b7a37003e576c2 190 Gene3D G3DSA:2.30.180.10 55 188 8.4E-35 T 20-04-2016 IPR000782 FAS1 domain APS56_RS07700 40dcee1f20981db340c4c1df250454b6 151 Gene3D G3DSA:3.10.129.10 13 148 4.1E-18 T 20-04-2016 IPR029069 HotDog domain APS56_RS07700 40dcee1f20981db340c4c1df250454b6 151 Pfam PF14539 Domain of unknown function (DUF4442) 15 145 5.3E-8 T 20-04-2016 IPR027961 Protein of unknown function DUF4442 APS56_RS07700 40dcee1f20981db340c4c1df250454b6 151 SUPERFAMILY SSF54637 6 145 6.93E-14 T 20-04-2016 IPR029069 HotDog domain APS56_RS00135 b55e7de40d8a89abf654e1d0b277b693 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 202 3.0E-60 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 APS56_RS00135 b55e7de40d8a89abf654e1d0b277b693 206 PANTHER PTHR17490:SF7 1 204 7.9E-76 T 20-04-2016 APS56_RS00135 b55e7de40d8a89abf654e1d0b277b693 206 Pfam PF01300 Telomere recombination 23 199 1.1E-46 T 20-04-2016 IPR006070 YrdC-like domain GO:0003725 APS56_RS00135 b55e7de40d8a89abf654e1d0b277b693 206 SUPERFAMILY SSF55821 1 205 5.49E-53 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APS56_RS00135 b55e7de40d8a89abf654e1d0b277b693 206 PANTHER PTHR17490 1 204 7.9E-76 T 20-04-2016 APS56_RS00135 b55e7de40d8a89abf654e1d0b277b693 206 Gene3D G3DSA:3.90.870.10 2 204 9.5E-58 T 20-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APS56_RS01890 91453b165ee3b667cc1d47ba250fdfaf 342 PANTHER PTHR34720:SF1 121 257 3.2E-16 T 20-04-2016 APS56_RS01890 91453b165ee3b667cc1d47ba250fdfaf 342 PANTHER PTHR34720 121 257 3.2E-16 T 20-04-2016 APS56_RS01890 91453b165ee3b667cc1d47ba250fdfaf 342 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 271 341 4.6E-9 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS02370 4b1ca017969e22c5ef52c51d9aae3a47 163 Gene3D G3DSA:2.40.160.20 34 163 5.2E-7 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS02370 4b1ca017969e22c5ef52c51d9aae3a47 163 SUPERFAMILY SSF56925 34 163 2.22E-10 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS02785 1adbfe8d7ca7f8c73b1c226495a91504 437 SUPERFAMILY SSF116734 4 221 3.6E-48 T 20-04-2016 APS56_RS02785 1adbfe8d7ca7f8c73b1c226495a91504 437 Pfam PF01420 Type I restriction modification DNA specificity domain 248 410 1.3E-6 T 20-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APS56_RS02785 1adbfe8d7ca7f8c73b1c226495a91504 437 Pfam PF01420 Type I restriction modification DNA specificity domain 19 199 6.2E-18 T 20-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 APS56_RS02785 1adbfe8d7ca7f8c73b1c226495a91504 437 PANTHER PTHR30408 8 214 5.3E-18 T 20-04-2016 APS56_RS02785 1adbfe8d7ca7f8c73b1c226495a91504 437 SUPERFAMILY SSF116734 248 432 4.41E-31 T 20-04-2016 APS56_RS02785 1adbfe8d7ca7f8c73b1c226495a91504 437 PANTHER PTHR30408:SF7 8 214 5.3E-18 T 20-04-2016 APS56_RS14200 321ee8018a6bcfadf4643f6f5be14de2 215 Pfam PF04055 Radical SAM superfamily 45 119 2.4E-10 T 20-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APS56_RS14200 321ee8018a6bcfadf4643f6f5be14de2 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 21 215 34.652 T 20-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APS56_RS14200 321ee8018a6bcfadf4643f6f5be14de2 215 SUPERFAMILY SSF102114 6 116 9.94E-10 T 20-04-2016 APS56_RS14200 321ee8018a6bcfadf4643f6f5be14de2 215 Pfam PF13394 4Fe-4S single cluster domain 42 122 2.1E-16 T 20-04-2016 APS56_RS14200 321ee8018a6bcfadf4643f6f5be14de2 215 PANTHER PTHR11228:SF6 19 214 9.3E-26 T 20-04-2016 APS56_RS14200 321ee8018a6bcfadf4643f6f5be14de2 215 PANTHER PTHR11228 19 214 9.3E-26 T 20-04-2016 APS56_RS14200 321ee8018a6bcfadf4643f6f5be14de2 215 PIRSF PIRSF000370 19 215 3.3E-54 T 20-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APS56_RS14200 321ee8018a6bcfadf4643f6f5be14de2 215 Gene3D G3DSA:3.20.20.70 46 119 3.3E-10 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 9.0E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.0E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 9.0E-13 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 Gene3D G3DSA:3.40.50.720 2 242 2.0E-75 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 SUPERFAMILY SSF51735 4 241 6.76E-73 T 20-04-2016 IPR016040 NAD(P)-binding domain APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.7E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.7E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.7E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.7E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-38 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PANTHER PTHR24322 153 183 5.0E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 PANTHER PTHR24322 10 137 5.0E-46 T 20-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 20-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APS56_RS02855 2becfa10e3eda95feca33084bb9e23fc 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 6.1E-58 T 20-04-2016 APS56_RS11885 62c3b42e9df45de7dc0bddc5350f54c5 153 Hamap MF_00984 Single-stranded DNA-binding protein. 5 113 29.44 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS11885 62c3b42e9df45de7dc0bddc5350f54c5 153 PANTHER PTHR10302 1 153 4.0E-36 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS11885 62c3b42e9df45de7dc0bddc5350f54c5 153 Pfam PF00436 Single-strand binding protein family 5 109 2.4E-33 T 20-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APS56_RS11885 62c3b42e9df45de7dc0bddc5350f54c5 153 SUPERFAMILY SSF50249 5 153 3.18E-44 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS11885 62c3b42e9df45de7dc0bddc5350f54c5 153 PIRSF PIRSF002070 1 151 1.9E-32 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS11885 62c3b42e9df45de7dc0bddc5350f54c5 153 PANTHER PTHR10302:SF0 1 153 4.0E-36 T 20-04-2016 APS56_RS11885 62c3b42e9df45de7dc0bddc5350f54c5 153 Gene3D G3DSA:2.40.50.140 4 153 9.7E-45 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS11885 62c3b42e9df45de7dc0bddc5350f54c5 153 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 153 1.0E-38 T 20-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APS56_RS07600 fa2dbdbf783ec6cfe6f27b696fd9cc9c 873 Pfam PF03200 Glycosyl hydrolase family 63 C-terminal domain 692 867 5.2E-11 T 20-04-2016 IPR031335 Glycosyl hydrolase family 63, C-terminal KEGG: 00052+3.2.1.10|KEGG: 00500+3.2.1.10|KEGG: 00510+3.2.1.106 APS56_RS07600 fa2dbdbf783ec6cfe6f27b696fd9cc9c 873 PANTHER PTHR10412 6 869 0.0 T 20-04-2016 IPR004888 Glycoside hydrolase family 63 GO:0004573|GO:0009311 APS56_RS07600 fa2dbdbf783ec6cfe6f27b696fd9cc9c 873 SUPERFAMILY SSF48208 402 613 1.11E-42 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS07600 fa2dbdbf783ec6cfe6f27b696fd9cc9c 873 SUPERFAMILY SSF48208 672 869 1.11E-42 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS07600 fa2dbdbf783ec6cfe6f27b696fd9cc9c 873 PANTHER PTHR10412:SF10 6 869 0.0 T 20-04-2016 APS56_RS14050 4a93d3bf85f6e83e94dce50f2706ab82 71 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.6E-35 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APS56_RS14050 4a93d3bf85f6e83e94dce50f2706ab82 71 Gene3D G3DSA:2.40.50.140 1 71 3.5E-36 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS14050 4a93d3bf85f6e83e94dce50f2706ab82 71 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.6E-25 T 20-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APS56_RS14050 4a93d3bf85f6e83e94dce50f2706ab82 71 PANTHER PTHR33370 1 71 1.5E-45 T 20-04-2016 APS56_RS14050 4a93d3bf85f6e83e94dce50f2706ab82 71 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 71 24.028 T 20-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APS56_RS14050 4a93d3bf85f6e83e94dce50f2706ab82 71 SUPERFAMILY SSF50249 1 71 1.3E-26 T 20-04-2016 IPR012340 Nucleic acid-binding, OB-fold APS56_RS13360 1fe9c47b6ca7f9df8944c5cf8f7aca78 117 Pfam PF01638 HxlR-like helix-turn-helix 23 110 1.0E-24 T 20-04-2016 IPR002577 Helix-turn-helix, HxlR type APS56_RS13360 1fe9c47b6ca7f9df8944c5cf8f7aca78 117 SUPERFAMILY SSF46785 8 114 7.69E-25 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13360 1fe9c47b6ca7f9df8944c5cf8f7aca78 117 Gene3D G3DSA:1.10.10.10 3 112 3.3E-33 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS13360 1fe9c47b6ca7f9df8944c5cf8f7aca78 117 PANTHER PTHR33204 16 113 9.1E-28 T 20-04-2016 APS56_RS05470 7cd293d6283ab39e4cfb614902785b49 393 SUPERFAMILY SSF53474 176 247 6.76E-5 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS05470 7cd293d6283ab39e4cfb614902785b49 393 SUPERFAMILY SSF53474 61 128 6.76E-5 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS05470 7cd293d6283ab39e4cfb614902785b49 393 Gene3D G3DSA:3.40.50.1820 163 327 1.7E-5 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS05470 7cd293d6283ab39e4cfb614902785b49 393 Gene3D G3DSA:3.40.50.1820 71 122 1.7E-5 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06790 077961b993eebe8c51c714854b597b57 177 SUPERFAMILY SSF53597 2 176 1.1E-32 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APS56_RS06790 077961b993eebe8c51c714854b597b57 177 Pfam PF01872 RibD C-terminal domain 2 169 9.4E-19 T 20-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APS56_RS06790 077961b993eebe8c51c714854b597b57 177 Gene3D G3DSA:3.40.430.10 3 176 5.9E-34 T 20-04-2016 IPR024072 Dihydrofolate reductase-like domain APS56_RS06790 077961b993eebe8c51c714854b597b57 177 PANTHER PTHR38011 2 175 3.8E-17 T 20-04-2016 APS56_RS11485 eff6d49f8e7396b4effc2847dbf3a056 459 Pfam PF08811 Protein of unknown function (DUF1800) 8 457 6.7E-102 T 20-04-2016 IPR014917 Protein of unknown function DUF1800 APS56_RS08045 adbe4d06d213d24d58bc4db978eaa6af 439 PANTHER PTHR35806 45 439 1.7E-168 T 20-04-2016 APS56_RS08045 adbe4d06d213d24d58bc4db978eaa6af 439 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 71 437 2.4E-146 T 20-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APS56_RS08045 adbe4d06d213d24d58bc4db978eaa6af 439 PIRSF PIRSF015658 49 439 3.6E-153 T 20-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APS56_RS08045 adbe4d06d213d24d58bc4db978eaa6af 439 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 70 433 1.1E-137 T 20-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 SMART SM00471 60 265 1.3E-8 T 20-04-2016 IPR003607 HD/PDEase domain APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 Gene3D G3DSA:1.10.3210.10 1 120 1.6E-65 T 20-04-2016 IPR006674 HD domain APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 Gene3D G3DSA:1.10.3210.10 157 254 1.6E-65 T 20-04-2016 IPR006674 HD domain APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 27 442 3.8E-93 T 20-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 Gene3D G3DSA:1.10.3550.10 121 154 9.1E-31 T 20-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 Gene3D G3DSA:1.10.3550.10 358 445 9.1E-31 T 20-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 SUPERFAMILY SSF109604 18 194 1.05E-63 T 20-04-2016 APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 SUPERFAMILY SSF109604 234 399 1.05E-63 T 20-04-2016 APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 Pfam PF01966 HD domain 64 136 9.6E-9 T 20-04-2016 IPR006674 HD domain APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 PANTHER PTHR11373:SF29 156 381 4.9E-65 T 20-04-2016 APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 PANTHER PTHR11373:SF29 1 140 4.9E-65 T 20-04-2016 APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 PANTHER PTHR11373 156 381 4.9E-65 T 20-04-2016 APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 PANTHER PTHR11373 1 140 4.9E-65 T 20-04-2016 APS56_RS09275 7c436ec7193b25f658cb7f0e6315c656 446 Gene3D G3DSA:1.10.3410.10 255 357 1.4E-32 T 20-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 Pfam PF01479 S4 domain 7 51 6.3E-11 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 20-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 Pfam PF00849 RNA pseudouridylate synthase 67 195 3.7E-16 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 226 1.2E-44 T 20-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 SMART SM00363 6 69 4.5E-11 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 PANTHER PTHR21600:SF24 6 249 5.4E-115 T 20-04-2016 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 Gene3D G3DSA:3.10.290.10 7 64 2.2E-23 T 20-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 PANTHER PTHR21600 6 249 5.4E-115 T 20-04-2016 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 SUPERFAMILY SSF55120 66 230 1.21E-38 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS14175 800823c8ee3248c438355b425e05dc39 256 SUPERFAMILY SSF55174 7 59 6.06E-15 T 20-04-2016 APS56_RS16435 fb8b7d54100256a2ff46dfae5b349ac8 91 PANTHER PTHR33204 1 87 1.4E-31 T 20-04-2016 APS56_RS16435 fb8b7d54100256a2ff46dfae5b349ac8 91 Pfam PF01638 HxlR-like helix-turn-helix 3 89 7.3E-28 T 20-04-2016 IPR002577 Helix-turn-helix, HxlR type APS56_RS16435 fb8b7d54100256a2ff46dfae5b349ac8 91 PANTHER PTHR33204:SF2 1 87 1.4E-31 T 20-04-2016 APS56_RS16435 fb8b7d54100256a2ff46dfae5b349ac8 91 Gene3D G3DSA:1.10.10.10 1 88 1.8E-32 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS16435 fb8b7d54100256a2ff46dfae5b349ac8 91 SUPERFAMILY SSF46785 1 86 1.67E-23 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS02380 c19ee52a529cbe29d56052601e0075a2 408 SUPERFAMILY SSF55931 11 384 7.36E-38 T 20-04-2016 APS56_RS02380 c19ee52a529cbe29d56052601e0075a2 408 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 12 287 7.2E-25 T 20-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APS56_RS16210 a4a054409243dd20a131fc4196a262d0 798 PANTHER PTHR38454:SF1 1 788 1.6E-21 T 20-04-2016 APS56_RS16210 a4a054409243dd20a131fc4196a262d0 798 Pfam PF09586 Bacterial membrane protein YfhO 694 773 1.2E-8 T 20-04-2016 IPR018580 Uncharacterised protein family YfhO APS56_RS16210 a4a054409243dd20a131fc4196a262d0 798 PANTHER PTHR38454 1 788 1.6E-21 T 20-04-2016 APS56_RS12260 bafb176fc02ee049ac8f17b4eedc1c01 84 SMART SM00679 17 48 4.4E-5 T 20-04-2016 IPR006603 PQ-loop repeat APS56_RS12260 bafb176fc02ee049ac8f17b4eedc1c01 84 Pfam PF04193 PQ loop repeat 5 60 1.4E-13 T 20-04-2016 IPR006603 PQ-loop repeat APS56_RS06315 d96eacab4ad6d6210d2094a47fefec8b 253 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 230 1.7E-17 T 20-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APS56_RS06315 d96eacab4ad6d6210d2094a47fefec8b 253 PANTHER PTHR11280:SF6 38 243 1.8E-65 T 20-04-2016 APS56_RS06315 d96eacab4ad6d6210d2094a47fefec8b 253 PANTHER PTHR11280 38 243 1.8E-65 T 20-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APS56_RS06315 d96eacab4ad6d6210d2094a47fefec8b 253 Gene3D G3DSA:3.40.50.1360 8 248 2.0E-57 T 20-04-2016 APS56_RS06315 d96eacab4ad6d6210d2094a47fefec8b 253 SUPERFAMILY SSF100950 7 248 2.99E-53 T 20-04-2016 APS56_RS08350 832e993350f82e9cc582d869af4f2b4f 155 SUPERFAMILY SSF56925 30 155 1.57E-9 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS03640 564cf21d09fadae18ee3998ce9068396 264 PANTHER PTHR11921:SF22 14 264 3.7E-115 T 20-04-2016 APS56_RS03640 564cf21d09fadae18ee3998ce9068396 264 PANTHER PTHR11921 14 264 3.7E-115 T 20-04-2016 APS56_RS03640 564cf21d09fadae18ee3998ce9068396 264 Pfam PF02754 Cysteine-rich domain 149 236 2.1E-16 T 20-04-2016 IPR004017 Cysteine-rich domain APS56_RS03640 564cf21d09fadae18ee3998ce9068396 264 Pfam PF02754 Cysteine-rich domain 24 107 7.0E-5 T 20-04-2016 IPR004017 Cysteine-rich domain APS56_RS03665 df3187a396ceb41aa7985fc64eeb0a8f 126 SUPERFAMILY SSF55298 1 126 4.71E-44 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APS56_RS03665 df3187a396ceb41aa7985fc64eeb0a8f 126 Pfam PF01042 Endoribonuclease L-PSP 8 125 4.1E-44 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family APS56_RS03665 df3187a396ceb41aa7985fc64eeb0a8f 126 Gene3D G3DSA:3.30.1330.40 1 124 1.2E-46 T 20-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APS56_RS03665 df3187a396ceb41aa7985fc64eeb0a8f 126 PANTHER PTHR11803 1 124 1.1E-54 T 20-04-2016 IPR006175 YjgF/YER057c/UK114 family APS56_RS03665 df3187a396ceb41aa7985fc64eeb0a8f 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 3.0E-51 T 20-04-2016 IPR006056 RidA family APS56_RS08335 173261336372e928b2a435b09b6215c2 134 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 13 101 7.1E-7 T 20-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III APS56_RS10335 9beb2ef3ada0dd87b7e7998fed917239 136 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 2 136 2.0E-63 T 20-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family APS56_RS10335 9beb2ef3ada0dd87b7e7998fed917239 136 Pfam PF06491 Disulphide isomerase 2 136 3.0E-65 T 20-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family APS56_RS10335 9beb2ef3ada0dd87b7e7998fed917239 136 PANTHER PTHR40052:SF2 1 136 5.6E-53 T 20-04-2016 APS56_RS10335 9beb2ef3ada0dd87b7e7998fed917239 136 PANTHER PTHR40052 1 136 5.6E-53 T 20-04-2016 APS56_RS01050 2634e5c53f3ab4e78b19cb45b6bc0781 132 Gene3D G3DSA:3.40.50.2300 5 129 1.3E-21 T 20-04-2016 APS56_RS01050 2634e5c53f3ab4e78b19cb45b6bc0781 132 Pfam PF00072 Response regulator receiver domain 6 125 8.9E-14 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01050 2634e5c53f3ab4e78b19cb45b6bc0781 132 SUPERFAMILY SSF52172 5 130 1.17E-18 T 20-04-2016 IPR011006 CheY-like superfamily APS56_RS01050 2634e5c53f3ab4e78b19cb45b6bc0781 132 SMART SM00448 4 125 1.6E-8 T 20-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APS56_RS01050 2634e5c53f3ab4e78b19cb45b6bc0781 132 PANTHER PTHR26402:SF483 4 128 7.3E-14 T 20-04-2016 APS56_RS01050 2634e5c53f3ab4e78b19cb45b6bc0781 132 PANTHER PTHR26402 4 128 7.3E-14 T 20-04-2016 APS56_RS02480 fccc527f5750648f1f7608249da7c2cf 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 274 290 8.0E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS02480 fccc527f5750648f1f7608249da7c2cf 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 274 8.0E-5 T 20-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APS56_RS02480 fccc527f5750648f1f7608249da7c2cf 296 Pfam PF12833 Helix-turn-helix domain 213 291 2.2E-17 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS02480 fccc527f5750648f1f7608249da7c2cf 296 PANTHER PTHR11019:SF45 9 296 3.0E-21 T 20-04-2016 APS56_RS02480 fccc527f5750648f1f7608249da7c2cf 296 Gene3D G3DSA:1.10.10.60 245 293 7.6E-14 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02480 fccc527f5750648f1f7608249da7c2cf 296 PANTHER PTHR11019 9 296 3.0E-21 T 20-04-2016 APS56_RS02480 fccc527f5750648f1f7608249da7c2cf 296 SUPERFAMILY SSF46689 245 293 1.48E-11 T 20-04-2016 IPR009057 Homeodomain-like GO:0003677 APS56_RS02480 fccc527f5750648f1f7608249da7c2cf 296 SMART SM00342 207 290 1.7E-20 T 20-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APS56_RS06785 c0170ae327c017f042101b0a6482d9b6 444 Pfam PF00589 Phage integrase family 282 428 7.4E-12 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS06785 c0170ae327c017f042101b0a6482d9b6 444 Gene3D G3DSA:1.10.443.10 275 427 4.8E-23 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS06785 c0170ae327c017f042101b0a6482d9b6 444 PANTHER PTHR30349 185 425 7.1E-22 T 20-04-2016 APS56_RS06785 c0170ae327c017f042101b0a6482d9b6 444 Pfam PF13102 Phage integrase SAM-like domain 6 201 6.2E-45 T 20-04-2016 IPR025269 Phage integrase SAM-like domain APS56_RS06785 c0170ae327c017f042101b0a6482d9b6 444 SUPERFAMILY SSF56349 158 426 3.83E-28 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS10755 40e6d3c6716d9043c43f09f13dab1aa6 235 PANTHER PTHR23416 92 235 7.0E-34 T 20-04-2016 APS56_RS10755 40e6d3c6716d9043c43f09f13dab1aa6 235 Gene3D G3DSA:2.160.10.10 101 234 5.9E-44 T 20-04-2016 APS56_RS10755 40e6d3c6716d9043c43f09f13dab1aa6 235 SUPERFAMILY SSF51161 118 233 2.75E-37 T 20-04-2016 IPR011004 Trimeric LpxA-like APS56_RS10755 40e6d3c6716d9043c43f09f13dab1aa6 235 Gene3D G3DSA:2.160.10.10 63 100 1.3E-4 T 20-04-2016 APS56_RS10755 40e6d3c6716d9043c43f09f13dab1aa6 235 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 7.4E-4 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS10755 40e6d3c6716d9043c43f09f13dab1aa6 235 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 180 214 2.6E-12 T 20-04-2016 IPR001451 Hexapeptide repeat APS56_RS14115 2e8144173a03de70937da3869e9f5586 202 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 37 183 2.7E-11 T 20-04-2016 IPR003741 LUD domain APS56_RS14115 2e8144173a03de70937da3869e9f5586 202 SUPERFAMILY SSF100950 37 199 4.1E-17 T 20-04-2016 APS56_RS14115 2e8144173a03de70937da3869e9f5586 202 Gene3D G3DSA:3.40.50.10420 37 173 7.5E-12 T 20-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APS56_RS03735 3feaebb98f54e2bc44f0598d7eace28f 246 Pfam PF03746 LamB/YcsF family 6 238 6.6E-81 T 20-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF APS56_RS03735 3feaebb98f54e2bc44f0598d7eace28f 246 SUPERFAMILY SSF88713 5 245 1.33E-83 T 20-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APS56_RS03735 3feaebb98f54e2bc44f0598d7eace28f 246 PANTHER PTHR30292:SF0 2 245 4.1E-86 T 20-04-2016 APS56_RS03735 3feaebb98f54e2bc44f0598d7eace28f 246 PANTHER PTHR30292 2 245 4.1E-86 T 20-04-2016 APS56_RS15900 d21c481998957b65dbc3fc7e36a2b88c 839 Gene3D G3DSA:3.40.50.10320 43 295 3.8E-29 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS15900 d21c481998957b65dbc3fc7e36a2b88c 839 SUPERFAMILY SSF102588 43 218 2.75E-29 T 20-04-2016 IPR024078 Putative deacetylase LmbE-like domain APS56_RS15900 d21c481998957b65dbc3fc7e36a2b88c 839 SUPERFAMILY SSF52317 625 808 6.64E-17 T 20-04-2016 IPR029062 Class I glutamine amidotransferase-like APS56_RS15900 d21c481998957b65dbc3fc7e36a2b88c 839 Pfam PF02585 GlcNAc-PI de-N-acetylase 45 179 2.5E-15 T 20-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related APS56_RS04290 7daf2e6f241c4c5a947c0a047eb398c3 186 SUPERFAMILY SSF109854 59 172 3.48E-6 T 20-04-2016 APS56_RS03880 224a235b01deb5bc8c0614f2ae58c070 315 SMART SM00028 140 173 0.044 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03880 224a235b01deb5bc8c0614f2ae58c070 315 SMART SM00028 180 212 100.0 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS03880 224a235b01deb5bc8c0614f2ae58c070 315 SUPERFAMILY SSF48452 129 206 9.01E-10 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03880 224a235b01deb5bc8c0614f2ae58c070 315 Gene3D G3DSA:1.25.40.10 129 206 9.5E-11 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS08190 83806b9c17f8838f1e515b2efb173453 151 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 9 146 4.2E-58 T 20-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 APS56_RS08190 83806b9c17f8838f1e515b2efb173453 151 SUPERFAMILY SSF52161 6 143 1.07E-56 T 20-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APS56_RS08190 83806b9c17f8838f1e515b2efb173453 151 PIRSF PIRSF002181 4 151 2.1E-51 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APS56_RS08190 83806b9c17f8838f1e515b2efb173453 151 PANTHER PTHR11545 5 142 2.0E-72 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APS56_RS08190 83806b9c17f8838f1e515b2efb173453 151 Gene3D G3DSA:3.90.1180.10 8 145 7.7E-62 T 20-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APS56_RS08190 83806b9c17f8838f1e515b2efb173453 151 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 20 148 28.687 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APS56_RS08190 83806b9c17f8838f1e515b2efb173453 151 ProSitePatterns PS00783 Ribosomal protein L13 signature. 110 132 - T 20-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 APS56_RS08190 83806b9c17f8838f1e515b2efb173453 151 Pfam PF00572 Ribosomal protein L13 19 143 2.7E-55 T 20-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APS56_RS00015 a2540112836ad1e972a7792c3c018a86 565 Pfam PF14371 Domain of unknown function (DUF4412) 375 514 6.5E-5 T 20-04-2016 IPR025524 Domain of unknown function DUF4412 APS56_RS01455 2f139ff5d21d04f1f3b2b4fc4b0cbccf 137 SUPERFAMILY SSF46785 4 133 3.33E-20 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS01455 2f139ff5d21d04f1f3b2b4fc4b0cbccf 137 Pfam PF01475 Ferric uptake regulator family 12 114 3.6E-11 T 20-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APS56_RS01455 2f139ff5d21d04f1f3b2b4fc4b0cbccf 137 Gene3D G3DSA:1.10.10.10 2 78 4.1E-11 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS07620 df86ebef83dff614fd2e1c3f3b33b79c 203 PANTHER PTHR30506:SF3 1 202 1.6E-75 T 20-04-2016 APS56_RS07620 df86ebef83dff614fd2e1c3f3b33b79c 203 PANTHER PTHR30506 1 202 1.6E-75 T 20-04-2016 APS56_RS07620 df86ebef83dff614fd2e1c3f3b33b79c 203 Pfam PF03458 UPF0126 domain 90 163 4.1E-25 T 20-04-2016 IPR005115 Uncharacterised domain UPF0126 APS56_RS07620 df86ebef83dff614fd2e1c3f3b33b79c 203 Pfam PF03458 UPF0126 domain 4 78 4.7E-22 T 20-04-2016 IPR005115 Uncharacterised domain UPF0126 APS56_RS14415 03ce462a4e0808dfa915d4c0643db80a 98 Pfam PF05258 Protein of unknown function (DUF721) 10 96 1.1E-15 T 20-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 APS56_RS13595 b1720a34ecd6f9dfa1e4a9afeaa1f34c 250 PANTHER PTHR11941 4 218 2.7E-33 T 20-04-2016 APS56_RS13595 b1720a34ecd6f9dfa1e4a9afeaa1f34c 250 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 215 9.5E-31 T 20-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APS56_RS13595 b1720a34ecd6f9dfa1e4a9afeaa1f34c 250 Gene3D G3DSA:3.90.226.10 4 240 5.3E-38 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS13595 b1720a34ecd6f9dfa1e4a9afeaa1f34c 250 SUPERFAMILY SSF52096 4 248 1.21E-40 T 20-04-2016 IPR029045 ClpP/crotonase-like domain APS56_RS10880 79080092743a23c8c8ef6ab9e7fcce4d 281 Pfam PF14054 Domain of unknown function (DUF4249) 8 274 2.8E-30 T 20-04-2016 IPR025345 Protein of unknown function DUF4249 APS56_RS12585 0c84ff6a2c122156944daef581704f2d 406 Pfam PF02687 FtsX-like permease family 287 399 1.5E-18 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS12585 0c84ff6a2c122156944daef581704f2d 406 PANTHER PTHR30572 1 406 1.3E-109 T 20-04-2016 APS56_RS12585 0c84ff6a2c122156944daef581704f2d 406 PANTHER PTHR30572:SF7 1 406 1.3E-109 T 20-04-2016 APS56_RS12585 0c84ff6a2c122156944daef581704f2d 406 Pfam PF12704 MacB-like periplasmic core domain 21 245 1.6E-39 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APS56_RS04955 433ed1a5d83202f5be116525d437a8ff 358 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 356 5.2E-44 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APS56_RS04955 433ed1a5d83202f5be116525d437a8ff 358 PANTHER PTHR30465:SF0 2 76 3.6E-92 T 20-04-2016 APS56_RS04955 433ed1a5d83202f5be116525d437a8ff 358 Gene3D G3DSA:1.10.3720.10 126 353 3.5E-28 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APS56_RS04955 433ed1a5d83202f5be116525d437a8ff 358 PANTHER PTHR30465:SF0 113 357 3.6E-92 T 20-04-2016 APS56_RS04955 433ed1a5d83202f5be116525d437a8ff 358 SUPERFAMILY SSF161098 128 342 6.28E-26 T 20-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APS56_RS04955 433ed1a5d83202f5be116525d437a8ff 358 PANTHER PTHR30465 2 76 3.6E-92 T 20-04-2016 APS56_RS04955 433ed1a5d83202f5be116525d437a8ff 358 PANTHER PTHR30465 113 357 3.6E-92 T 20-04-2016 APS56_RS06425 d31e4076d1b44c81c848aae3d3a1530d 194 SUPERFAMILY SSF88946 6 105 2.55E-9 T 20-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06425 d31e4076d1b44c81c848aae3d3a1530d 194 SUPERFAMILY SSF88659 130 190 3.55E-6 T 20-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APS56_RS06425 d31e4076d1b44c81c848aae3d3a1530d 194 Gene3D G3DSA:1.10.10.10 126 186 7.8E-5 T 20-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APS56_RS06425 d31e4076d1b44c81c848aae3d3a1530d 194 Gene3D G3DSA:1.10.1740.10 6 107 6.4E-9 T 20-04-2016 APS56_RS02050 3e468a3b34a9ab4899b25612cb8fd77d 134 PANTHER PTHR33540 3 129 7.7E-31 T 20-04-2016 APS56_RS02050 3e468a3b34a9ab4899b25612cb8fd77d 134 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 123 2.9E-32 T 20-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APS56_RS02050 3e468a3b34a9ab4899b25612cb8fd77d 134 SUPERFAMILY SSF52540 24 122 1.28E-20 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02050 3e468a3b34a9ab4899b25612cb8fd77d 134 PANTHER PTHR33540:SF2 3 129 7.7E-31 T 20-04-2016 APS56_RS02050 3e468a3b34a9ab4899b25612cb8fd77d 134 Gene3D G3DSA:3.40.50.300 8 133 7.7E-39 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS02050 3e468a3b34a9ab4899b25612cb8fd77d 134 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 7 127 1.2E-35 T 20-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APS56_RS06900 4e826b3dc7f001f0101c29bc791d92f2 120 Pfam PF08818 Domain of unknown function (DU1801) 17 115 1.8E-7 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 APS56_RS06900 4e826b3dc7f001f0101c29bc791d92f2 120 SUPERFAMILY SSF159888 1 117 1.22E-9 T 20-04-2016 APS56_RS09420 622e4f3f1ac95d9b82a0b472a5e3ca69 196 Pfam PF13795 HupE / UreJ protein 9 164 2.8E-44 T 20-04-2016 IPR032809 Putative HupE/UreJ protein APS56_RS05055 6767e37051ae51cfef7f2b890d1510a6 321 Pfam PF11276 Protein of unknown function (DUF3078) 50 141 1.1E-27 T 20-04-2016 IPR021428 Protein of unknown function DUF3078 APS56_RS11835 c27a6f38a6f71d12915f9a6820ad1973 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 20-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APS56_RS11835 c27a6f38a6f71d12915f9a6820ad1973 404 PANTHER PTHR11601 1 403 9.0E-195 T 20-04-2016 APS56_RS11835 c27a6f38a6f71d12915f9a6820ad1973 404 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 6 403 1.2E-179 T 20-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APS56_RS11835 c27a6f38a6f71d12915f9a6820ad1973 404 Gene3D G3DSA:3.40.640.10 35 281 1.7E-81 T 20-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APS56_RS11835 c27a6f38a6f71d12915f9a6820ad1973 404 SUPERFAMILY SSF53383 3 399 7.13E-125 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS11835 c27a6f38a6f71d12915f9a6820ad1973 404 Pfam PF00266 Aminotransferase class-V 24 392 2.0E-148 T 20-04-2016 IPR000192 Aminotransferase class V domain APS56_RS11835 c27a6f38a6f71d12915f9a6820ad1973 404 PANTHER PTHR11601:SF17 1 403 9.0E-195 T 20-04-2016 APS56_RS11835 c27a6f38a6f71d12915f9a6820ad1973 404 Gene3D G3DSA:3.90.1150.10 282 398 7.5E-28 T 20-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APS56_RS04425 3cd246f52b4cf821dd070d3684df8fb6 530 PIRSF PIRSF012535 1 530 1.1E-93 T 20-04-2016 IPR011199 Bacillithiol biosynthesis BshC APS56_RS04425 3cd246f52b4cf821dd070d3684df8fb6 530 PANTHER PTHR41301 3 530 3.2E-52 T 20-04-2016 APS56_RS04425 3cd246f52b4cf821dd070d3684df8fb6 530 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 4 530 25.535 T 20-04-2016 IPR011199 Bacillithiol biosynthesis BshC APS56_RS04425 3cd246f52b4cf821dd070d3684df8fb6 530 Pfam PF10079 Uncharacterized protein conserved in bacteria (DUF2317) 1 527 6.0E-200 T 20-04-2016 IPR011199 Bacillithiol biosynthesis BshC APS56_RS04425 3cd246f52b4cf821dd070d3684df8fb6 530 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 13 527 6.0E-142 T 20-04-2016 IPR011199 Bacillithiol biosynthesis BshC APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 SUPERFAMILY SSF54506 5 118 1.92E-33 T 20-04-2016 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 257 2.7E-60 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 PANTHER PTHR31689 5 257 4.9E-61 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 258 26.713 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 Gene3D G3DSA:3.10.310.10 4 115 2.7E-33 T 20-04-2016 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 65 79 - T 20-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 Pfam PF01678 Diaminopimelate epimerase 132 249 9.2E-15 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 Pfam PF01678 Diaminopimelate epimerase 5 109 6.3E-24 T 20-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 SUPERFAMILY SSF54506 122 256 3.93E-32 T 20-04-2016 APS56_RS16270 6521704c69521290a86ae46b2aadc77a 258 Gene3D G3DSA:3.10.310.10 116 234 1.2E-29 T 20-04-2016 APS56_RS13330 75e41fa077b0cd2bfb9c840bb829b09f 97 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 20 92 2.2E-32 T 20-04-2016 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 APS56_RS15310 f08d90ec21d618e7db65fa1cc78a2d5f 392 SUPERFAMILY SSF53807 101 379 2.51E-34 T 20-04-2016 APS56_RS15310 f08d90ec21d618e7db65fa1cc78a2d5f 392 PANTHER PTHR30535:SF11 55 392 3.8E-58 T 20-04-2016 APS56_RS15310 f08d90ec21d618e7db65fa1cc78a2d5f 392 PANTHER PTHR30535 55 392 3.8E-58 T 20-04-2016 APS56_RS15310 f08d90ec21d618e7db65fa1cc78a2d5f 392 Gene3D G3DSA:3.40.50.1980 228 385 3.0E-10 T 20-04-2016 APS56_RS15310 f08d90ec21d618e7db65fa1cc78a2d5f 392 Gene3D G3DSA:3.40.50.1980 105 227 1.1E-12 T 20-04-2016 APS56_RS15310 f08d90ec21d618e7db65fa1cc78a2d5f 392 Pfam PF01497 Periplasmic binding protein 108 343 1.6E-19 T 20-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APS56_RS04880 2a3bcee291dbe15b66743db659be99f3 436 PANTHER PTHR30203 31 428 2.1E-32 T 20-04-2016 APS56_RS04880 2a3bcee291dbe15b66743db659be99f3 436 Pfam PF02321 Outer membrane efflux protein 31 234 2.2E-23 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS04880 2a3bcee291dbe15b66743db659be99f3 436 Pfam PF02321 Outer membrane efflux protein 261 434 5.4E-19 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS04880 2a3bcee291dbe15b66743db659be99f3 436 Gene3D G3DSA:1.20.1600.10 30 433 3.2E-60 T 20-04-2016 APS56_RS04880 2a3bcee291dbe15b66743db659be99f3 436 SUPERFAMILY SSF56954 3 434 1.57E-66 T 20-04-2016 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 PANTHER PTHR11846 2 425 1.1E-211 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 SMART SM00788 3 422 2.7E-238 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 Gene3D G3DSA:1.10.300.10 102 193 3.3E-26 T 20-04-2016 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 SUPERFAMILY SSF52540 2 423 7.97E-153 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 20-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 425 171.407 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 Pfam PF00709 Adenylosuccinate synthetase 6 421 1.5E-167 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 Gene3D G3DSA:3.90.170.10 266 423 1.4E-64 T 20-04-2016 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 20-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 422 7.8E-157 T 20-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 Gene3D G3DSA:3.40.440.10 194 265 4.1E-65 T 20-04-2016 APS56_RS03925 a0ce0c234c9d28a9ec4f2ee43f4d3e93 425 Gene3D G3DSA:3.40.440.10 1 93 4.1E-65 T 20-04-2016 APS56_RS09785 7be3db8cfa61a4770f7807b20aed171e 476 PANTHER PTHR10342:SF199 1 472 3.8E-156 T 20-04-2016 APS56_RS09785 7be3db8cfa61a4770f7807b20aed171e 476 Pfam PF00884 Sulfatase 28 362 4.9E-75 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS09785 7be3db8cfa61a4770f7807b20aed171e 476 ProSitePatterns PS00523 Sulfatases signature 1. 74 86 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS09785 7be3db8cfa61a4770f7807b20aed171e 476 Gene3D G3DSA:3.30.1120.10 396 451 8.5E-14 T 20-04-2016 APS56_RS09785 7be3db8cfa61a4770f7807b20aed171e 476 PANTHER PTHR10342 1 472 3.8E-156 T 20-04-2016 APS56_RS09785 7be3db8cfa61a4770f7807b20aed171e 476 SUPERFAMILY SSF53649 27 448 1.74E-124 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS09785 7be3db8cfa61a4770f7807b20aed171e 476 Gene3D G3DSA:3.40.720.10 27 395 1.2E-109 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS07540 bf37b5615628a418cb300d22b83b0ef5 302 Pfam PF03781 Sulfatase-modifying factor enzyme 1 23 256 8.9E-45 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS07540 bf37b5615628a418cb300d22b83b0ef5 302 SUPERFAMILY SSF56436 21 282 2.07E-54 T 20-04-2016 IPR016187 C-type lectin fold APS56_RS07540 bf37b5615628a418cb300d22b83b0ef5 302 Gene3D G3DSA:3.90.1580.10 13 291 2.3E-63 T 20-04-2016 IPR005532 Sulfatase-modifying factor enzyme APS56_RS07540 bf37b5615628a418cb300d22b83b0ef5 302 PANTHER PTHR23150:SF19 9 295 4.1E-58 T 20-04-2016 APS56_RS07540 bf37b5615628a418cb300d22b83b0ef5 302 PANTHER PTHR23150 9 295 4.1E-58 T 20-04-2016 APS56_RS00990 9ed3f7289160742490491a67de86fab9 437 PANTHER PTHR41339 4 374 7.7E-22 T 20-04-2016 APS56_RS04965 335bd0ba3d3910fcdc6f8fcf63c6144e 179 Pfam PF07659 Domain of Unknown Function (DUF1599) 115 176 8.5E-29 T 20-04-2016 IPR011630 Clostridium phage phiCTP1, Gp74 APS56_RS04965 335bd0ba3d3910fcdc6f8fcf63c6144e 179 Pfam PF07659 Domain of Unknown Function (DUF1599) 22 82 1.5E-27 T 20-04-2016 IPR011630 Clostridium phage phiCTP1, Gp74 APS56_RS05460 5d5b064aea43328faf0c30230a3aa61f 140 SUPERFAMILY SSF75169 33 139 3.06E-10 T 20-04-2016 IPR027396 DsrEFH-like APS56_RS05460 5d5b064aea43328faf0c30230a3aa61f 140 Gene3D G3DSA:3.40.1260.10 38 136 1.2E-8 T 20-04-2016 IPR027396 DsrEFH-like APS56_RS01180 1ff0981bf3c976cb6c2c3b0ed05a25b6 303 Gene3D G3DSA:3.40.50.1820 105 178 2.6E-5 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS01180 1ff0981bf3c976cb6c2c3b0ed05a25b6 303 SUPERFAMILY SSF53474 43 165 4.69E-7 T 20-04-2016 IPR029058 Alpha/Beta hydrolase fold APS56_RS06220 33c510a67e6b0faf06f6b7f73ab066d4 195 PANTHER PTHR32479:SF11 34 194 5.3E-23 T 20-04-2016 APS56_RS06220 33c510a67e6b0faf06f6b7f73ab066d4 195 Gene3D G3DSA:3.40.50.10420 34 194 1.4E-33 T 20-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APS56_RS06220 33c510a67e6b0faf06f6b7f73ab066d4 195 PANTHER PTHR32479 34 194 5.3E-23 T 20-04-2016 APS56_RS06220 33c510a67e6b0faf06f6b7f73ab066d4 195 SUPERFAMILY SSF100950 34 194 2.18E-29 T 20-04-2016 APS56_RS06220 33c510a67e6b0faf06f6b7f73ab066d4 195 Pfam PF02589 Uncharacterised ACR, YkgG family COG1556 95 194 2.8E-15 T 20-04-2016 IPR003741 LUD domain APS56_RS08135 a5adc75070ddbfc33499c2bb552f72ca 231 Pfam PF13568 Outer membrane protein beta-barrel domain 28 207 4.2E-22 T 20-04-2016 IPR025665 Outer membrane protein beta-barrel domain APS56_RS07165 e87b51f789de34d8cb017de6fac91ec3 127 Pfam PF06170 Protein of unknown function (DUF983) 36 115 1.8E-10 T 20-04-2016 IPR009325 Protein of unknown function DUF983 APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 SUPERFAMILY SSF46548 120 242 3.14E-19 T 20-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 Gene3D G3DSA:3.10.20.30 1 111 1.2E-28 T 20-04-2016 IPR012675 Beta-grasp domain APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 120 4.3E-23 T 20-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 Gene3D G3DSA:1.10.1060.10 112 243 5.9E-19 T 20-04-2016 APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 Pfam PF13183 4Fe-4S dicluster domain 157 229 1.7E-9 T 20-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 20-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 PANTHER PTHR11921 3 246 4.2E-115 T 20-04-2016 APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 SUPERFAMILY SSF54292 1 116 5.27E-22 T 20-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APS56_RS11735 8982ace944d0fd0d30d28f849a35bd3f 247 PANTHER PTHR11921:SF13 3 246 4.2E-115 T 20-04-2016 APS56_RS10395 cf617519ed01a71ca2c0e786d415d4e7 661 Gene3D G3DSA:2.40.170.20 133 661 1.2E-33 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS10395 cf617519ed01a71ca2c0e786d415d4e7 661 SUPERFAMILY SSF56935 32 661 9.89E-46 T 20-04-2016 APS56_RS15845 120a2c502503ee20c757830bdf5a31c6 97 Pfam PF04359 Protein of unknown function (DUF493) 22 89 9.7E-7 T 20-04-2016 IPR007454 Uncharacterised protein family UPF0250 APS56_RS15845 120a2c502503ee20c757830bdf5a31c6 97 Gene3D G3DSA:3.30.70.1460 15 95 6.5E-14 T 20-04-2016 IPR027471 YbeD-like domain APS56_RS15845 120a2c502503ee20c757830bdf5a31c6 97 SUPERFAMILY SSF117991 15 89 2.62E-16 T 20-04-2016 IPR027471 YbeD-like domain APS56_RS09150 da43442f21cc03bd74680dcb047dad0b 165 Pfam PF00034 Cytochrome c 78 165 9.8E-10 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS09150 da43442f21cc03bd74680dcb047dad0b 165 SUPERFAMILY SSF46626 72 165 7.65E-17 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS09150 da43442f21cc03bd74680dcb047dad0b 165 SUPERFAMILY SSF46626 1 17 7.65E-17 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS09150 da43442f21cc03bd74680dcb047dad0b 165 Gene3D G3DSA:1.10.760.10 80 164 2.0E-15 T 20-04-2016 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 APS56_RS12580 dc039a6e4fe7bf56d6ed8abe5b9c959f 132 Pfam PF07681 DoxX 9 87 1.2E-17 T 20-04-2016 IPR032808 DoxX family APS56_RS12580 dc039a6e4fe7bf56d6ed8abe5b9c959f 132 PANTHER PTHR33452 1 131 2.3E-18 T 20-04-2016 APS56_RS12580 dc039a6e4fe7bf56d6ed8abe5b9c959f 132 PANTHER PTHR33452:SF1 1 131 2.3E-18 T 20-04-2016 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 276 288 7.9E-22 T 20-04-2016 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 180 196 7.9E-22 T 20-04-2016 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 312 336 7.9E-22 T 20-04-2016 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 204 218 7.9E-22 T 20-04-2016 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 SUPERFAMILY SSF53335 8 493 3.08E-143 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 PANTHER PTHR30408 158 480 9.5E-137 T 20-04-2016 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 Pfam PF12161 HsdM N-terminal domain 10 144 6.5E-25 T 20-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 479 2.8E-100 T 20-04-2016 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 279 285 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 PANTHER PTHR30408:SF4 158 480 9.5E-137 T 20-04-2016 APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 Gene3D G3DSA:3.40.50.150 182 416 4.2E-44 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS08660 28c2bee843d753e164dc49c040a18585 494 Pfam PF02384 N-6 DNA Methylase 157 460 6.0E-112 T 20-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 APS56_RS05750 1d23be32b0409eda1d96dafd5c6ca20d 137 Pfam PF05523 WxcM-like, C-terminal 7 134 3.2E-53 T 20-04-2016 IPR008894 WxcM-like, C-terminal MetaCyc: PWY-6953|MetaCyc: PWY-7688 APS56_RS05750 1d23be32b0409eda1d96dafd5c6ca20d 137 Gene3D G3DSA:2.60.120.10 43 113 6.1E-7 T 20-04-2016 IPR014710 RmlC-like jelly roll fold APS56_RS05750 1d23be32b0409eda1d96dafd5c6ca20d 137 SUPERFAMILY SSF51182 7 135 5.04E-42 T 20-04-2016 IPR011051 RmlC-like cupin domain APS56_RS00405 9bdae892e7f3c1de09b0b30bb6f72499 131 SUPERFAMILY SSF52833 11 111 1.12E-6 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS00405 9bdae892e7f3c1de09b0b30bb6f72499 131 Gene3D G3DSA:3.40.30.10 10 119 9.3E-8 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS16275 975e34647007b001390bff8353426db9 174 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 5.2E-20 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS16275 975e34647007b001390bff8353426db9 174 PANTHER PTHR13256 2 173 1.1E-26 T 20-04-2016 APS56_RS16275 975e34647007b001390bff8353426db9 174 SUPERFAMILY SSF55729 1 172 9.86E-35 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS16275 975e34647007b001390bff8353426db9 174 PANTHER PTHR13256:SF10 2 173 1.1E-26 T 20-04-2016 APS56_RS16275 975e34647007b001390bff8353426db9 174 Gene3D G3DSA:3.40.630.30 1 173 1.6E-31 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS08695 53c8cb1bb57fff714b4e61246d4170e7 395 Pfam PF08800 VirE N-terminal domain 57 162 7.5E-5 T 20-04-2016 IPR014907 Virulence-protein E, N-terminal APS56_RS15850 7625e2d82243bdcc905e6daf8a589cfa 217 Pfam PF14123 Domain of unknown function (DUF4290) 5 177 9.8E-77 T 20-04-2016 IPR025632 Protein of unknown function DUF4290 APS56_RS04355 c01064ee2172c700244ba4ab8b75731f 189 SUPERFAMILY SSF48317 5 180 2.62E-32 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APS56_RS04355 c01064ee2172c700244ba4ab8b75731f 189 SMART SM00014 60 176 6.4E-15 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APS56_RS04355 c01064ee2172c700244ba4ab8b75731f 189 Pfam PF01569 PAP2 superfamily 61 179 7.2E-24 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APS56_RS04355 c01064ee2172c700244ba4ab8b75731f 189 Gene3D G3DSA:1.20.144.10 4 179 9.1E-28 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APS56_RS04355 c01064ee2172c700244ba4ab8b75731f 189 PANTHER PTHR14969 1 176 8.9E-23 T 20-04-2016 APS56_RS03190 9c9e016563876e719c508358363839f2 140 Pfam PF07681 DoxX 21 97 2.3E-5 T 20-04-2016 IPR032808 DoxX family APS56_RS16405 d4cd58e5541bdc58170cd1226085a084 333 Gene3D G3DSA:3.90.550.10 5 211 6.3E-34 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS16405 d4cd58e5541bdc58170cd1226085a084 333 SUPERFAMILY SSF53448 4 275 1.27E-42 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS16405 d4cd58e5541bdc58170cd1226085a084 333 PANTHER PTHR22916:SF30 2 275 3.0E-52 T 20-04-2016 APS56_RS16405 d4cd58e5541bdc58170cd1226085a084 333 Pfam PF00535 Glycosyl transferase family 2 6 146 6.2E-24 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS16405 d4cd58e5541bdc58170cd1226085a084 333 PANTHER PTHR22916 2 275 3.0E-52 T 20-04-2016 APS56_RS13045 38c77de00b2151e3e080ec776517673d 178 Pfam PF04238 Protein of unknown function (DUF420) 45 173 4.2E-46 T 20-04-2016 IPR007352 Protein of unknown function DUF420 APS56_RS13045 38c77de00b2151e3e080ec776517673d 178 PANTHER PTHR37692 2 178 1.7E-37 T 20-04-2016 APS56_RS15600 94787b2574e0aef065fa6ff95fdd292d 563 Pfam PF14322 Starch-binding associating with outer membrane 43 211 1.4E-19 T 20-04-2016 APS56_RS15600 94787b2574e0aef065fa6ff95fdd292d 563 Gene3D G3DSA:1.25.40.10 193 290 1.9E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15600 94787b2574e0aef065fa6ff95fdd292d 563 Gene3D G3DSA:1.25.40.10 366 461 1.9E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15600 94787b2574e0aef065fa6ff95fdd292d 563 SUPERFAMILY SSF48452 15 488 2.02E-116 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15600 94787b2574e0aef065fa6ff95fdd292d 563 SUPERFAMILY SSF48452 531 563 2.02E-116 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS15600 94787b2574e0aef065fa6ff95fdd292d 563 Pfam PF07980 SusD family 265 563 5.0E-48 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS12770 f180308246daa9e9d93b945a282a8ab2 379 Pfam PF00535 Glycosyl transferase family 2 41 214 6.6E-24 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS12770 f180308246daa9e9d93b945a282a8ab2 379 PANTHER PTHR22916 39 235 3.1E-19 T 20-04-2016 APS56_RS12770 f180308246daa9e9d93b945a282a8ab2 379 Gene3D G3DSA:3.90.550.10 39 273 8.3E-29 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS12770 f180308246daa9e9d93b945a282a8ab2 379 SUPERFAMILY SSF53448 37 310 4.99E-39 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS16450 0d6f37836dd7afdca15b37b8b1fe2f6a 324 PANTHER PTHR34184 2 324 2.9E-134 T 20-04-2016 APS56_RS16450 0d6f37836dd7afdca15b37b8b1fe2f6a 324 PANTHER PTHR34184:SF2 2 324 2.9E-134 T 20-04-2016 APS56_RS16450 0d6f37836dd7afdca15b37b8b1fe2f6a 324 Pfam PF03773 Predicted permease 24 321 2.8E-66 T 20-04-2016 IPR005524 Predicted permease DUF318 APS56_RS10860 aed46bf16c401c542c936ad6c5cacffc 327 Pfam PF16125 Domain of unknown function (DUF4837) 31 323 3.0E-96 T 20-04-2016 IPR032286 Protein of unknown function DUF4837 APS56_RS01725 d52f9cc255fe47256d4a112ffb0a2ed8 311 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 5 298 3.3E-80 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS01725 d52f9cc255fe47256d4a112ffb0a2ed8 311 Pfam PF11751 Protein of unknown function (DUF3308) 20 297 5.6E-89 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS12415 4440936c2a32bf2d237c79b14b524575 351 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 211 325 7.3E-10 T 20-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APS56_RS12415 4440936c2a32bf2d237c79b14b524575 351 SUPERFAMILY SSF53756 3 325 4.19E-22 T 20-04-2016 APS56_RS12415 4440936c2a32bf2d237c79b14b524575 351 Gene3D G3DSA:3.40.50.2000 204 328 1.8E-11 T 20-04-2016 APS56_RS11770 5c3e17be517513991d5f738b12028fc4 120 Gene3D G3DSA:2.60.40.420 9 120 1.5E-6 T 20-04-2016 IPR008972 Cupredoxin APS56_RS11770 5c3e17be517513991d5f738b12028fc4 120 SUPERFAMILY SSF49503 6 119 1.54E-6 T 20-04-2016 IPR008972 Cupredoxin APS56_RS11770 5c3e17be517513991d5f738b12028fc4 120 Pfam PF13473 Cupredoxin-like domain 5 119 4.2E-9 T 20-04-2016 IPR028096 EfeO-type cupredoxin-like domain APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 247 2.5E-62 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 180 208 1.6E-35 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 10 37 1.6E-35 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 128 154 1.6E-35 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 110 128 1.6E-35 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 269 18.519 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 12 252 2.0E-50 T 20-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 PANTHER PTHR30371 76 274 1.3E-68 T 20-04-2016 APS56_RS05185 5ea7f6eee2bbd63d0bcba5eade67006f 279 PANTHER PTHR30371 8 53 1.3E-68 T 20-04-2016 APS56_RS01460 1320ed5d2615d3a8b7171ecf5248b94d 120 Pfam PF12487 Protein of unknown function (DUF3703) 11 117 8.1E-43 T 20-04-2016 IPR022172 Protein of unknown function DUF3703 APS56_RS10545 9b39e152b52ff7aae824c075fab29460 163 TIGRFAM TIGR03511 GldH_lipo: gliding motility-associated lipoprotein GldH 6 158 5.7E-35 T 20-04-2016 IPR020018 Gliding motility-associated lipoprotein, GldH APS56_RS10545 9b39e152b52ff7aae824c075fab29460 163 Pfam PF14109 GldH lipoprotein 24 157 1.6E-42 T 20-04-2016 IPR020018 Gliding motility-associated lipoprotein, GldH APS56_RS11220 fbeeab0419a3c86c3c8c79fc642c69e8 628 Pfam PF05359 Domain of Unknown Function (DUF748) 252 387 5.1E-9 T 20-04-2016 IPR008023 Protein of unknown function DUF748 APS56_RS11220 fbeeab0419a3c86c3c8c79fc642c69e8 628 Pfam PF05359 Domain of Unknown Function (DUF748) 35 182 3.6E-15 T 20-04-2016 IPR008023 Protein of unknown function DUF748 APS56_RS13100 3014deef8420c39ec856c1d6360b0030 335 Pfam PF11751 Protein of unknown function (DUF3308) 22 318 9.4E-69 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS13100 3014deef8420c39ec856c1d6360b0030 335 TIGRFAM TIGR03519 T9SS_PorP_fam: type IX secretion system membrane protein, PorP/SprF family 1 320 2.0E-55 T 20-04-2016 IPR019861 Type IX secretion system membrane protein, PorP/SprF family APS56_RS09625 6a9d1c580fc1eba9b82e91cfea482c41 316 Pfam PF00149 Calcineurin-like phosphoesterase 34 247 7.2E-17 T 20-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APS56_RS09625 6a9d1c580fc1eba9b82e91cfea482c41 316 Gene3D G3DSA:3.60.21.10 31 305 1.4E-46 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS09625 6a9d1c580fc1eba9b82e91cfea482c41 316 PANTHER PTHR22953 15 208 3.7E-24 T 20-04-2016 APS56_RS09625 6a9d1c580fc1eba9b82e91cfea482c41 316 PANTHER PTHR22953 225 246 3.7E-24 T 20-04-2016 APS56_RS09625 6a9d1c580fc1eba9b82e91cfea482c41 316 PANTHER PTHR22953:SF0 15 208 3.7E-24 T 20-04-2016 APS56_RS09625 6a9d1c580fc1eba9b82e91cfea482c41 316 PANTHER PTHR22953:SF0 225 246 3.7E-24 T 20-04-2016 APS56_RS09625 6a9d1c580fc1eba9b82e91cfea482c41 316 SUPERFAMILY SSF56300 33 308 5.21E-47 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS07175 def83e4544f2a556f941889d8b633121 296 TIGRFAM TIGR03523 GldN: gliding motility associated protein GldN 8 296 3.8E-83 T 20-04-2016 IPR019847 Gliding motility associated protein GldN APS56_RS08020 83e5e5a99a1034715350b123617434bd 496 Gene3D G3DSA:3.90.550.10 55 301 1.3E-28 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS08020 83e5e5a99a1034715350b123617434bd 496 SUPERFAMILY SSF53448 335 388 1.02E-43 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS08020 83e5e5a99a1034715350b123617434bd 496 SUPERFAMILY SSF53448 56 294 1.02E-43 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS08020 83e5e5a99a1034715350b123617434bd 496 Pfam PF13641 Glycosyltransferase like family 2 56 281 2.0E-28 T 20-04-2016 APS56_RS08020 83e5e5a99a1034715350b123617434bd 496 PANTHER PTHR32044 47 309 1.9E-109 T 20-04-2016 APS56_RS08020 83e5e5a99a1034715350b123617434bd 496 PANTHER PTHR32044:SF10 47 309 1.9E-109 T 20-04-2016 APS56_RS07570 163e7430dbdeabd184a1282b457a6c9b 202 PANTHER PTHR21600 2 122 6.9E-38 T 20-04-2016 APS56_RS07570 163e7430dbdeabd184a1282b457a6c9b 202 PANTHER PTHR21600 142 191 6.9E-38 T 20-04-2016 APS56_RS07570 163e7430dbdeabd184a1282b457a6c9b 202 SUPERFAMILY SSF55120 14 195 3.68E-30 T 20-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS07570 163e7430dbdeabd184a1282b457a6c9b 202 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 54 68 - T 20-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APS56_RS07570 163e7430dbdeabd184a1282b457a6c9b 202 PANTHER PTHR21600:SF23 2 122 6.9E-38 T 20-04-2016 APS56_RS07570 163e7430dbdeabd184a1282b457a6c9b 202 PANTHER PTHR21600:SF23 142 191 6.9E-38 T 20-04-2016 APS56_RS07570 163e7430dbdeabd184a1282b457a6c9b 202 Pfam PF00849 RNA pseudouridylate synthase 14 165 1.3E-17 T 20-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APS56_RS07570 163e7430dbdeabd184a1282b457a6c9b 202 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 18 192 3.4E-34 T 20-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 ProSitePatterns PS00216 Sugar transport proteins signature 1. 296 313 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 PANTHER PTHR23500 1 438 2.1E-169 T 20-04-2016 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 SUPERFAMILY SSF103473 5 436 1.44E-72 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 Pfam PF00083 Sugar (and other) transporter 9 436 2.8E-110 T 20-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 4 434 9.5E-106 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 ProSitePatterns PS00217 Sugar transport proteins signature 2. 105 130 - T 20-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 Gene3D G3DSA:1.20.1250.20 241 435 3.7E-24 T 20-04-2016 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 Gene3D G3DSA:1.20.1250.20 12 191 1.0E-24 T 20-04-2016 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 PRINTS PR00171 Sugar transporter signature 337 358 3.4E-19 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 PRINTS PR00171 Sugar transporter signature 252 262 3.4E-19 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 PRINTS PR00171 Sugar transporter signature 16 26 3.4E-19 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 PRINTS PR00171 Sugar transporter signature 100 119 3.4E-19 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 PRINTS PR00171 Sugar transporter signature 360 372 3.4E-19 T 20-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APS56_RS06125 9f47479fe02122d3b2621821fb4455fa 441 PANTHER PTHR23500:SF22 1 438 2.1E-169 T 20-04-2016 APS56_RS01780 117b6da1609632633101f1b276b96f40 274 Pfam PF12864 Protein of unknown function (DUF3822) 6 246 7.4E-71 T 20-04-2016 IPR024213 Protein of unknown function DUF3822 APS56_RS08395 590310fc03f30adf7d2d86ee7a0e1b36 334 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 195 291 2.2E-32 T 20-04-2016 IPR019236 Domain of unknown function DUF2183 APS56_RS08395 590310fc03f30adf7d2d86ee7a0e1b36 334 PANTHER PTHR28208:SF3 48 307 1.1E-49 T 20-04-2016 APS56_RS08395 590310fc03f30adf7d2d86ee7a0e1b36 334 PANTHER PTHR28208 48 307 1.1E-49 T 20-04-2016 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 Pfam PF13414 TPR repeat 57 93 2.1E-8 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 Gene3D G3DSA:1.25.40.10 25 127 1.6E-16 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 Gene3D G3DSA:1.25.40.10 128 178 7.2E-5 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 Gene3D G3DSA:1.25.40.10 270 298 1.2E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 Gene3D G3DSA:1.25.40.10 179 230 1.2E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 PANTHER PTHR23083 26 302 1.4E-18 T 20-04-2016 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 SUPERFAMILY SSF48452 26 140 4.01E-17 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 SUPERFAMILY SSF81901 55 298 2.2E-13 T 20-04-2016 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 SMART SM00028 50 83 0.019 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 SMART SM00028 164 197 9.6 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS06515 03afb624765e8208e3ad4f192d82d9f7 317 SMART SM00028 270 303 0.17 T 20-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APS56_RS05130 e97c5617080ac24f072304f72916d2f8 145 Pfam PF13508 Acetyltransferase (GNAT) domain 54 136 2.2E-10 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS05130 e97c5617080ac24f072304f72916d2f8 145 Gene3D G3DSA:3.40.630.30 11 138 2.3E-15 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS05130 e97c5617080ac24f072304f72916d2f8 145 SUPERFAMILY SSF55729 10 139 9.26E-16 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 178 1.3E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 180 5.9E-10 T 20-04-2016 IPR023214 HAD-like domain APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 Gene3D G3DSA:3.40.50.1000 1 187 1.7E-30 T 20-04-2016 IPR023214 HAD-like domain APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 7.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 94 107 7.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 7.1E-5 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 PANTHER PTHR12725 1 196 4.7E-16 T 20-04-2016 APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 126 182 2.2E-9 T 20-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APS56_RS16320 74ce2e07be535868800e2ad610b3f4c0 203 SUPERFAMILY SSF56784 3 189 7.11E-29 T 20-04-2016 IPR023214 HAD-like domain APS56_RS04960 17b93b433fddf48508c699a4eeba452e 435 Pfam PF07681 DoxX 7 93 1.8E-8 T 20-04-2016 IPR032808 DoxX family APS56_RS02700 f69fa8aeddd80d5b4c779120a337f53a 91 PANTHER PTHR23505:SF8 1 89 2.4E-21 T 20-04-2016 APS56_RS02700 f69fa8aeddd80d5b4c779120a337f53a 91 SUPERFAMILY SSF103473 3 89 8.11E-10 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS02700 f69fa8aeddd80d5b4c779120a337f53a 91 Gene3D G3DSA:1.20.1250.20 3 89 3.0E-8 T 20-04-2016 APS56_RS02700 f69fa8aeddd80d5b4c779120a337f53a 91 PANTHER PTHR23505 1 89 2.4E-21 T 20-04-2016 APS56_RS06320 78884288ed583e6a06bcbdb6d11ebcbb 350 Pfam PF13469 Sulfotransferase family 17 226 2.0E-23 T 20-04-2016 APS56_RS06320 78884288ed583e6a06bcbdb6d11ebcbb 350 SUPERFAMILY SSF52540 17 60 1.71E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06320 78884288ed583e6a06bcbdb6d11ebcbb 350 SUPERFAMILY SSF52540 111 290 1.71E-29 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06320 78884288ed583e6a06bcbdb6d11ebcbb 350 Gene3D G3DSA:3.40.50.300 122 289 4.8E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS06320 78884288ed583e6a06bcbdb6d11ebcbb 350 Gene3D G3DSA:3.40.50.300 16 65 4.8E-17 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS11295 1680a8df8f9933137b46deef21ddcd73 1662 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1077 1146 3.4E-5 T 20-04-2016 IPR007452 Translocation and assembly module TamB APS56_RS11295 1680a8df8f9933137b46deef21ddcd73 1662 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1166 1622 1.3E-91 T 20-04-2016 IPR007452 Translocation and assembly module TamB APS56_RS15695 19bdf7812aba403aca259d17ce8249ff 405 Gene3D G3DSA:2.60.40.920 224 308 1.6E-4 T 20-04-2016 IPR003344 Big-1 (bacterial Ig-like domain 1) domain APS56_RS15695 19bdf7812aba403aca259d17ce8249ff 405 SUPERFAMILY SSF49373 221 311 1.02E-5 T 20-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APS56_RS03945 9474bf4085b3a7fa956d5b3ed4290e8a 477 SUPERFAMILY SSF48452 20 476 1.21E-107 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS03945 9474bf4085b3a7fa956d5b3ed4290e8a 477 PANTHER PTHR35148 1 476 3.3E-45 T 20-04-2016 APS56_RS03945 9474bf4085b3a7fa956d5b3ed4290e8a 477 Pfam PF12771 Starch-binding associating with outer membrane 14 476 6.2E-55 T 20-04-2016 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 PANTHER PTHR10342 229 325 1.1E-130 T 20-04-2016 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 PANTHER PTHR10342 342 498 1.1E-130 T 20-04-2016 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 PANTHER PTHR10342 2 198 1.1E-130 T 20-04-2016 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 Pfam PF16385 Domain of unknown function 400 494 1.0E-32 T 20-04-2016 IPR032158 Domain of unknown function DUF4994 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 ProSitePatterns PS00523 Sulfatases signature 1. 69 81 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 Gene3D G3DSA:3.30.1120.10 430 499 1.3E-14 T 20-04-2016 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 Pfam PF00884 Sulfatase 23 396 8.2E-66 T 20-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 Gene3D G3DSA:3.40.720.10 20 180 3.6E-102 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 Gene3D G3DSA:3.40.720.10 220 416 3.6E-102 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 ProSitePatterns PS00149 Sulfatases signature 2. 116 126 - T 20-04-2016 IPR024607 Sulfatase, conserved site APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 SUPERFAMILY SSF53649 21 194 1.29E-116 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 SUPERFAMILY SSF53649 234 498 1.29E-116 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 PANTHER PTHR10342:SF22 229 325 1.1E-130 T 20-04-2016 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 PANTHER PTHR10342:SF22 342 498 1.1E-130 T 20-04-2016 APS56_RS13700 bce6c97f41cc8332089a7a2f02d3cb14 501 PANTHER PTHR10342:SF22 2 198 1.1E-130 T 20-04-2016 APS56_RS03060 31783f10d62e3feb871d9f8d520945be 305 Pfam PF01112 Asparaginase 27 293 7.7E-71 T 20-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 APS56_RS03060 31783f10d62e3feb871d9f8d520945be 305 PANTHER PTHR10188:SF23 12 288 1.2E-112 T 20-04-2016 APS56_RS03060 31783f10d62e3feb871d9f8d520945be 305 SUPERFAMILY SSF56235 14 293 3.86E-80 T 20-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APS56_RS03060 31783f10d62e3feb871d9f8d520945be 305 PANTHER PTHR10188 12 288 1.2E-112 T 20-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 APS56_RS00255 b58186f022e9d2568e461a2eb09f786b 185 PANTHER PTHR22769 42 147 9.6E-12 T 20-04-2016 APS56_RS00255 b58186f022e9d2568e461a2eb09f786b 185 ProSitePatterns PS00893 Nudix box signature. 67 88 - T 20-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APS56_RS00255 b58186f022e9d2568e461a2eb09f786b 185 Pfam PF00293 NUDIX domain 30 158 2.7E-17 T 20-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APS56_RS00255 b58186f022e9d2568e461a2eb09f786b 185 SUPERFAMILY SSF55811 3 178 4.6E-34 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS00255 b58186f022e9d2568e461a2eb09f786b 185 Gene3D G3DSA:3.90.79.10 1 182 4.7E-43 T 20-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APS56_RS15475 23600f0f6ac4a8dfe5b4c2c4acabeefb 320 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 6 315 5.3E-86 T 20-04-2016 IPR016833 Putative sodium bile acid cotransporter APS56_RS15475 23600f0f6ac4a8dfe5b4c2c4acabeefb 320 PIRSF PIRSF026166 1 320 7.4E-87 T 20-04-2016 IPR016833 Putative sodium bile acid cotransporter APS56_RS15475 23600f0f6ac4a8dfe5b4c2c4acabeefb 320 PANTHER PTHR18640 3 314 1.1E-64 T 20-04-2016 IPR016833 Putative sodium bile acid cotransporter APS56_RS06895 7219239ec41e849eecef8bd1915a757c 118 SUPERFAMILY SSF54593 4 115 5.1E-23 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06895 7219239ec41e849eecef8bd1915a757c 118 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 112 1.3E-11 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS56_RS06895 7219239ec41e849eecef8bd1915a757c 118 Gene3D G3DSA:3.10.180.10 3 116 8.2E-28 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS16515 182dca4e2c9e28a8ce51691573d0b2ed 480 PANTHER PTHR11819 3 445 5.4E-81 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS16515 182dca4e2c9e28a8ce51691573d0b2ed 480 PANTHER PTHR11819:SF94 3 445 5.4E-81 T 20-04-2016 IPR031155 Urea active transporter GO:0015204|GO:0016021|GO:0071918 APS56_RS16515 182dca4e2c9e28a8ce51691573d0b2ed 480 Pfam PF00474 Sodium:solute symporter family 33 420 2.5E-23 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS02705 ed9f0a6a4d2b47305aaee78fba2c42ab 196 PANTHER PTHR11845 9 144 7.0E-23 T 20-04-2016 APS56_RS02705 ed9f0a6a4d2b47305aaee78fba2c42ab 196 Pfam PF13023 HD domain 16 178 2.2E-52 T 20-04-2016 IPR006674 HD domain APS56_RS02705 ed9f0a6a4d2b47305aaee78fba2c42ab 196 SUPERFAMILY SSF109604 8 187 5.97E-45 T 20-04-2016 APS56_RS02705 ed9f0a6a4d2b47305aaee78fba2c42ab 196 Gene3D G3DSA:1.10.3210.10 4 190 7.2E-43 T 20-04-2016 IPR006674 HD domain APS56_RS08435 cba8c5b46079e1d0f583d9b445d46a19 150 SUPERFAMILY SSF89095 1 148 5.02E-37 T 20-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 APS56_RS08435 cba8c5b46079e1d0f583d9b445d46a19 150 Pfam PF09424 Yqey-like protein 5 148 3.1E-45 T 20-04-2016 IPR019004 Uncharacterised domain YOR215C, mitochondrial APS56_RS08435 cba8c5b46079e1d0f583d9b445d46a19 150 Gene3D G3DSA:1.10.1510.10 1 92 1.3E-27 T 20-04-2016 APS56_RS08435 cba8c5b46079e1d0f583d9b445d46a19 150 PANTHER PTHR28055 1 150 1.1E-44 T 20-04-2016 APS56_RS08435 cba8c5b46079e1d0f583d9b445d46a19 150 PANTHER PTHR28055:SF1 1 150 1.1E-44 T 20-04-2016 APS56_RS08435 cba8c5b46079e1d0f583d9b445d46a19 150 Gene3D G3DSA:1.10.10.410 93 149 1.0E-20 T 20-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal APS56_RS15715 7d725fb5d6beaaebec1a19e9f66a522f 390 PANTHER PTHR30273 2 120 5.8E-61 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS15715 7d725fb5d6beaaebec1a19e9f66a522f 390 PANTHER PTHR30273 179 389 5.8E-61 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS15715 7d725fb5d6beaaebec1a19e9f66a522f 390 Pfam PF04773 FecR protein 183 276 4.8E-14 T 20-04-2016 IPR006860 FecR protein APS56_RS15715 7d725fb5d6beaaebec1a19e9f66a522f 390 Pfam PF16344 Domain of unknown function (DUF4974) 287 388 8.4E-20 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS15715 7d725fb5d6beaaebec1a19e9f66a522f 390 PANTHER PTHR30273:SF2 2 120 5.8E-61 T 20-04-2016 APS56_RS15715 7d725fb5d6beaaebec1a19e9f66a522f 390 PANTHER PTHR30273:SF2 179 389 5.8E-61 T 20-04-2016 APS56_RS07660 41f1f606366c8fab107aab61494edcdf 375 Pfam PF03929 PepSY-associated TM region 15 366 1.2E-55 T 20-04-2016 IPR005625 PepSY-associated TM protein APS56_RS07660 41f1f606366c8fab107aab61494edcdf 375 PANTHER PTHR34219 5 374 3.9E-49 T 20-04-2016 APS56_RS13290 e2dc4a593647f88bec021ac13a5409a8 531 SUPERFAMILY SSF51126 21 349 1.15E-36 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS13290 e2dc4a593647f88bec021ac13a5409a8 531 SUPERFAMILY SSF51126 387 446 1.15E-36 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS13290 e2dc4a593647f88bec021ac13a5409a8 531 PANTHER PTHR11319 116 351 5.9E-12 T 20-04-2016 APS56_RS13290 e2dc4a593647f88bec021ac13a5409a8 531 Gene3D G3DSA:2.160.20.10 21 447 8.5E-39 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS13290 e2dc4a593647f88bec021ac13a5409a8 531 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 464 531 2.0E-15 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS14460 6746ca54d080a9a140212eea5c8cea6b 284 PANTHER PTHR22936 20 198 2.0E-15 T 20-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APS56_RS14460 6746ca54d080a9a140212eea5c8cea6b 284 Pfam PF01694 Rhomboid family 57 201 1.1E-21 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS14460 6746ca54d080a9a140212eea5c8cea6b 284 Gene3D G3DSA:1.20.1540.10 19 199 3.9E-28 T 20-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APS56_RS14460 6746ca54d080a9a140212eea5c8cea6b 284 SUPERFAMILY SSF144091 15 204 1.83E-32 T 20-04-2016 APS56_RS12855 8ce412f6e6f8e67ee2f8ee47225e0abc 260 Pfam PF15418 Domain of unknown function (DUF4625) 20 146 5.1E-29 T 20-04-2016 IPR027829 Protein of unknown function DUF4625 APS56_RS12855 8ce412f6e6f8e67ee2f8ee47225e0abc 260 Pfam PF15418 Domain of unknown function (DUF4625) 156 255 1.8E-18 T 20-04-2016 IPR027829 Protein of unknown function DUF4625 APS56_RS15285 507e686f4950bf7f1504234e0be3c1c0 236 Pfam PF11750 Protein of unknown function (DUF3307) 3 110 1.7E-30 T 20-04-2016 IPR021737 Bacteriophage phiKZ, Orf197 APS56_RS09215 d3a58c2bcac10a7048ce77290e53cf6d 447 Gene3D G3DSA:1.20.1600.10 24 439 5.9E-63 T 20-04-2016 APS56_RS09215 d3a58c2bcac10a7048ce77290e53cf6d 447 SUPERFAMILY SSF56954 3 441 6.41E-72 T 20-04-2016 APS56_RS09215 d3a58c2bcac10a7048ce77290e53cf6d 447 Pfam PF02321 Outer membrane efflux protein 28 227 4.8E-21 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS09215 d3a58c2bcac10a7048ce77290e53cf6d 447 Pfam PF02321 Outer membrane efflux protein 261 442 7.6E-26 T 20-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APS56_RS09215 d3a58c2bcac10a7048ce77290e53cf6d 447 PANTHER PTHR30026 5 445 3.2E-38 T 20-04-2016 APS56_RS07615 b7dd6edac30a3f65568c96f6400bd1ad 239 PANTHER PTHR11071 10 239 1.2E-22 T 20-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APS56_RS07615 b7dd6edac30a3f65568c96f6400bd1ad 239 SUPERFAMILY SSF50891 66 236 1.46E-35 T 20-04-2016 IPR029000 Cyclophilin-like domain APS56_RS07615 b7dd6edac30a3f65568c96f6400bd1ad 239 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 80 236 3.7E-34 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS07615 b7dd6edac30a3f65568c96f6400bd1ad 239 Gene3D G3DSA:2.40.100.10 65 238 4.8E-39 T 20-04-2016 IPR029000 Cyclophilin-like domain APS56_RS07615 b7dd6edac30a3f65568c96f6400bd1ad 239 PANTHER PTHR11071:SF192 10 239 1.2E-22 T 20-04-2016 APS56_RS07615 b7dd6edac30a3f65568c96f6400bd1ad 239 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 7.4E-7 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS07615 b7dd6edac30a3f65568c96f6400bd1ad 239 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 197 212 7.4E-7 T 20-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APS56_RS09170 c24c5902dc4c929c29002bec71f97c1f 145 Pfam PF05573 NosL 30 139 5.0E-16 T 20-04-2016 IPR008719 Nitrous oxide reductase accessory protein NosL APS56_RS09170 c24c5902dc4c929c29002bec71f97c1f 145 SUPERFAMILY SSF160387 46 141 1.83E-18 T 20-04-2016 APS56_RS00335 6ea3f18023d2626302fd2ce9f254194f 62 PIRSF PIRSF039008 1 62 3.4E-22 T 20-04-2016 IPR026042 Stress response protein YjbJ APS56_RS00335 6ea3f18023d2626302fd2ce9f254194f 62 SUPERFAMILY SSF69047 1 61 1.03E-20 T 20-04-2016 IPR008462 CsbD-like APS56_RS00335 6ea3f18023d2626302fd2ce9f254194f 62 Gene3D G3DSA:1.10.1470.10 1 62 8.0E-24 T 20-04-2016 IPR008462 CsbD-like APS56_RS00335 6ea3f18023d2626302fd2ce9f254194f 62 Pfam PF05532 CsbD-like 4 55 8.1E-18 T 20-04-2016 IPR008462 CsbD-like APS56_RS14135 7388b0a9835e8512fbb9d852cbf92b6c 131 Gene3D G3DSA:3.30.530.20 8 125 5.2E-12 T 20-04-2016 IPR023393 START-like domain APS56_RS14135 7388b0a9835e8512fbb9d852cbf92b6c 131 SUPERFAMILY SSF55961 8 125 3.78E-18 T 20-04-2016 APS56_RS06110 7a26c7aaf1fa2c3157b95ab62295d09d 933 SUPERFAMILY SSF48230 156 402 1.01E-17 T 20-04-2016 IPR008929 Chondroitin AC/alginate lyase APS56_RS06110 7a26c7aaf1fa2c3157b95ab62295d09d 933 Pfam PF07940 Heparinase II/III-like protein 480 580 4.0E-8 T 20-04-2016 IPR012480 Heparinase II/III-like MetaCyc: PWY-7651 APS56_RS04045 494119e4d6839a9ae0df856373e34465 191 Pfam PF13568 Outer membrane protein beta-barrel domain 21 159 5.7E-12 T 20-04-2016 IPR025665 Outer membrane protein beta-barrel domain APS56_RS06680 18e7c8a8337ba292861b304168c6e107 552 PIRSF PIRSF031924 5 550 1.1E-138 T 20-04-2016 IPR026263 Alkaline phosphatase, prokaryotic KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APS56_RS06680 18e7c8a8337ba292861b304168c6e107 552 SUPERFAMILY SSF53649 147 222 4.58E-57 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06680 18e7c8a8337ba292861b304168c6e107 552 SUPERFAMILY SSF53649 272 532 4.58E-57 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06680 18e7c8a8337ba292861b304168c6e107 552 SUPERFAMILY SSF53649 32 117 4.58E-57 T 20-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APS56_RS06680 18e7c8a8337ba292861b304168c6e107 552 Gene3D G3DSA:3.40.720.10 272 383 2.9E-65 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06680 18e7c8a8337ba292861b304168c6e107 552 Gene3D G3DSA:3.40.720.10 5 213 2.9E-65 T 20-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APS56_RS06680 18e7c8a8337ba292861b304168c6e107 552 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 36 489 3.7E-60 T 20-04-2016 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 APS56_RS02260 1d8dab74ad109f5ec9dde80d61021e73 381 SUPERFAMILY SSF53187 20 247 4.19E-41 T 20-04-2016 APS56_RS02260 1d8dab74ad109f5ec9dde80d61021e73 381 Gene3D G3DSA:3.40.630.10 21 186 3.8E-34 T 20-04-2016 APS56_RS02260 1d8dab74ad109f5ec9dde80d61021e73 381 SMART SM00631 22 242 4.0E-4 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APS56_RS02260 1d8dab74ad109f5ec9dde80d61021e73 381 Pfam PF00246 Zinc carboxypeptidase 35 132 7.4E-15 T 20-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APS56_RS07955 1c56c914fb83cb1634a57cadd5246027 209 SUPERFAMILY SSF53448 8 193 1.91E-31 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS07955 1c56c914fb83cb1634a57cadd5246027 209 Gene3D G3DSA:3.90.550.10 13 180 2.2E-23 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS07955 1c56c914fb83cb1634a57cadd5246027 209 TIGRFAM TIGR04282 glyco_like_cofC: transferase 1, rSAM/selenodomain-associated 6 188 5.7E-59 T 20-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated APS56_RS07955 1c56c914fb83cb1634a57cadd5246027 209 PANTHER PTHR36529 6 190 3.4E-35 T 20-04-2016 APS56_RS07955 1c56c914fb83cb1634a57cadd5246027 209 Pfam PF09837 Uncharacterized protein conserved in bacteria (DUF2064) 72 155 1.2E-30 T 20-04-2016 IPR018641 Transferase 1, rSAM/selenodomain-associated APS56_RS15410 c0dccb6bca4d831cfacda4fd96e677bf 222 SUPERFAMILY SSF75217 15 178 7.85E-40 T 20-04-2016 IPR029028 Alpha/beta knot methyltransferases APS56_RS15410 c0dccb6bca4d831cfacda4fd96e677bf 222 Pfam PF00588 SpoU rRNA Methylase family 34 171 7.6E-34 T 20-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APS56_RS15410 c0dccb6bca4d831cfacda4fd96e677bf 222 Gene3D G3DSA:3.40.1280.10 19 198 3.1E-44 T 20-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APS56_RS15410 c0dccb6bca4d831cfacda4fd96e677bf 222 PANTHER PTHR12029 6 198 7.8E-48 T 20-04-2016 APS56_RS15410 c0dccb6bca4d831cfacda4fd96e677bf 222 PANTHER PTHR12029:SF45 6 198 7.8E-48 T 20-04-2016 APS56_RS05675 9e8496936ee921bc42984a698f835964 326 PANTHER PTHR34184 5 326 9.3E-54 T 20-04-2016 APS56_RS05675 9e8496936ee921bc42984a698f835964 326 Pfam PF03773 Predicted permease 8 322 8.2E-47 T 20-04-2016 IPR005524 Predicted permease DUF318 APS56_RS06800 65681b1a5e73865cca74411d40f25be3 129 Gene3D G3DSA:3.10.180.10 14 117 4.2E-9 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS06800 65681b1a5e73865cca74411d40f25be3 129 SUPERFAMILY SSF54593 21 121 4.15E-9 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS11030 9a1d8de6a85e0d249bbff36fbcd7888b 395 SUPERFAMILY SSF55729 204 371 9.72E-14 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS11030 9a1d8de6a85e0d249bbff36fbcd7888b 395 Gene3D G3DSA:3.40.630.30 192 339 9.0E-7 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS05520 d8f41cb6d6aa0c19824a827f9052e06b 109 Pfam PF11950 Protein of unknown function (DUF3467) 3 92 1.3E-29 T 20-04-2016 IPR021857 Protein of unknown function DUF3467 APS56_RS14965 6620f13336e5b2c58a6c1866a43800d3 93 Gene3D G3DSA:3.40.30.10 2 80 7.5E-6 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS14965 6620f13336e5b2c58a6c1866a43800d3 93 SUPERFAMILY SSF52833 1 93 7.2E-12 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS08085 7128d7509116a61cf37310dd2a3abc15 324 Gene3D G3DSA:3.40.910.10 6 322 1.4E-74 T 20-04-2016 IPR002773 Deoxyhypusine synthase GO:0008612 UniPathway: UPA00354 APS56_RS08085 7128d7509116a61cf37310dd2a3abc15 324 SUPERFAMILY SSF52467 7 323 8.83E-81 T 20-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APS56_RS08085 7128d7509116a61cf37310dd2a3abc15 324 Pfam PF01916 Deoxyhypusine synthase 17 320 2.5E-39 T 20-04-2016 IPR002773 Deoxyhypusine synthase GO:0008612 UniPathway: UPA00354 APS56_RS08085 7128d7509116a61cf37310dd2a3abc15 324 PANTHER PTHR11703 31 319 4.2E-47 T 20-04-2016 IPR002773 Deoxyhypusine synthase GO:0008612 UniPathway: UPA00354 APS56_RS08130 d9fcfa4751d15cc167408a37855d7dab 156 Pfam PF02472 Biopolymer transport protein ExbD/TolR 12 151 8.9E-21 T 20-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APS56_RS12665 5ffa0fbd47339846e889556cf378e2ae 298 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 242 297 4.4E-6 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS14335 689616495f99a359bb04f349d0961851 242 Pfam PF13568 Outer membrane protein beta-barrel domain 37 212 5.1E-28 T 20-04-2016 IPR025665 Outer membrane protein beta-barrel domain APS56_RS14335 689616495f99a359bb04f349d0961851 242 SUPERFAMILY SSF56925 46 195 5.23E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS10790 fd1305003a50519bad70cb31e4ed0f0e 400 Pfam PF01943 Polysaccharide biosynthesis protein 8 267 9.0E-14 T 20-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 Pfam PF11028 Protein of unknown function (DUF2723) 37 214 5.0E-70 T 20-04-2016 IPR021280 Protein of unknown function DUF2723 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214 825 1079 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214 5 229 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214 466 588 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214 298 344 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214 604 730 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214:SF2 825 1079 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214:SF2 5 229 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214:SF2 466 588 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214:SF2 298 344 7.0E-178 T 20-04-2016 APS56_RS09000 2b6bfc879609fb27eaa5a180df28a8ad 1097 PANTHER PTHR16214:SF2 604 730 7.0E-178 T 20-04-2016 APS56_RS14350 7cd775a903e72b863e047c458a30933d 497 PANTHER PTHR32024:SF2 2 497 4.9E-189 T 20-04-2016 APS56_RS14350 7cd775a903e72b863e047c458a30933d 497 PANTHER PTHR32024 2 497 4.9E-189 T 20-04-2016 APS56_RS14350 7cd775a903e72b863e047c458a30933d 497 Pfam PF02386 Cation transport protein 40 490 7.3E-65 T 20-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APS56_RS14350 7cd775a903e72b863e047c458a30933d 497 PIRSF PIRSF006247 1 496 3.5E-176 T 20-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APS56_RS12355 bb1df8a20d46b1c22696dd5b7d1587c1 148 Pfam PF04945 YHS domain 46 80 4.0E-7 T 20-04-2016 IPR007029 YHS domain APS56_RS01185 e9dad839f2a38a601f23f95d059da8f1 63 Pfam PF13683 Integrase core domain 8 55 1.3E-10 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS01185 e9dad839f2a38a601f23f95d059da8f1 63 Gene3D G3DSA:3.30.420.10 9 55 2.0E-4 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS04630 92c9f26ad981877012d9a99c66ec8ddd 421 Gene3D G3DSA:1.50.10.10 52 419 1.2E-131 T 20-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APS56_RS04630 92c9f26ad981877012d9a99c66ec8ddd 421 Pfam PF07470 Glycosyl Hydrolase Family 88 82 407 1.0E-19 T 20-04-2016 IPR010905 Glycosyl hydrolase, family 88 APS56_RS04630 92c9f26ad981877012d9a99c66ec8ddd 421 PANTHER PTHR36845:SF1 76 421 8.2E-81 T 20-04-2016 APS56_RS04630 92c9f26ad981877012d9a99c66ec8ddd 421 SUPERFAMILY SSF48208 79 419 2.67E-97 T 20-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APS56_RS04630 92c9f26ad981877012d9a99c66ec8ddd 421 PANTHER PTHR36845 76 421 8.2E-81 T 20-04-2016 APS56_RS06045 4aa2dadddee3807460a2e14bfd71e17e 379 SUPERFAMILY SSF51126 60 264 2.84E-23 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS06045 4aa2dadddee3807460a2e14bfd71e17e 379 SUPERFAMILY SSF51126 305 359 2.84E-23 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS06045 4aa2dadddee3807460a2e14bfd71e17e 379 Gene3D G3DSA:2.160.20.10 304 363 6.2E-20 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS06045 4aa2dadddee3807460a2e14bfd71e17e 379 Gene3D G3DSA:2.160.20.10 63 265 6.2E-20 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS06045 4aa2dadddee3807460a2e14bfd71e17e 379 Pfam PF13229 Right handed beta helix region 155 281 4.8E-5 T 20-04-2016 APS56_RS09300 83042b81c795e9aa1f11658d2f7d68f7 130 PANTHER PTHR30069:SF11 1 109 2.9E-14 T 20-04-2016 APS56_RS09300 83042b81c795e9aa1f11658d2f7d68f7 130 Pfam PF13715 CarboxypepD_reg-like domain 24 109 6.4E-22 T 20-04-2016 APS56_RS09300 83042b81c795e9aa1f11658d2f7d68f7 130 Gene3D G3DSA:2.60.40.1120 24 101 2.0E-17 T 20-04-2016 IPR014766 Carboxypeptidase, regulatory domain APS56_RS09300 83042b81c795e9aa1f11658d2f7d68f7 130 SUPERFAMILY SSF49464 22 109 8.24E-18 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS09300 83042b81c795e9aa1f11658d2f7d68f7 130 PANTHER PTHR30069 1 109 2.9E-14 T 20-04-2016 APS56_RS10285 9b86cfc2107ff70776534c21bd284bd9 172 Pfam PF00210 Ferritin-like domain 8 143 1.0E-38 T 20-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APS56_RS10285 9b86cfc2107ff70776534c21bd284bd9 172 SUPERFAMILY SSF47240 1 159 6.81E-55 T 20-04-2016 IPR009078 Ferritin-like superfamily APS56_RS10285 9b86cfc2107ff70776534c21bd284bd9 172 Gene3D G3DSA:1.20.1260.10 1 162 9.0E-56 T 20-04-2016 IPR012347 Ferritin-related APS56_RS10285 9b86cfc2107ff70776534c21bd284bd9 172 PANTHER PTHR11431 3 164 9.9E-38 T 20-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 APS56_RS10285 9b86cfc2107ff70776534c21bd284bd9 172 PANTHER PTHR11431:SF4 3 164 9.9E-38 T 20-04-2016 APS56_RS01435 bf6a3302f05ef710984e4e7fe4694605 367 Pfam PF14022 Protein of unknown function (DUF4238) 6 284 2.6E-44 T 20-04-2016 IPR025332 Protein of unknown function DUF4238 APS56_RS07440 0d81d77e51d04b468942395d9a133b71 516 SUPERFAMILY SSF48452 82 127 7.41E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS07440 0d81d77e51d04b468942395d9a133b71 516 SUPERFAMILY SSF48452 316 391 7.41E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS07440 0d81d77e51d04b468942395d9a133b71 516 Gene3D G3DSA:1.25.40.10 319 387 4.6E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS07440 0d81d77e51d04b468942395d9a133b71 516 Gene3D G3DSA:1.25.40.10 82 138 4.6E-6 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04800 ffb5208accd30ad043109852a0f76229 543 Pfam PF07980 SusD family 257 541 2.4E-40 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS04800 ffb5208accd30ad043109852a0f76229 543 Gene3D G3DSA:1.25.40.10 196 296 2.0E-35 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04800 ffb5208accd30ad043109852a0f76229 543 Gene3D G3DSA:1.25.40.10 378 474 2.0E-35 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04800 ffb5208accd30ad043109852a0f76229 543 Pfam PF14322 Starch-binding associating with outer membrane 29 217 9.7E-28 T 20-04-2016 APS56_RS04800 ffb5208accd30ad043109852a0f76229 543 SUPERFAMILY SSF48452 23 542 1.48E-108 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS04735 45d7d9820f671ac2e04ce8c6d31f2017 149 Gene3D G3DSA:3.40.140.10 22 149 1.3E-31 T 20-04-2016 APS56_RS04735 45d7d9820f671ac2e04ce8c6d31f2017 149 PANTHER PTHR30471 46 149 1.0E-31 T 20-04-2016 APS56_RS04735 45d7d9820f671ac2e04ce8c6d31f2017 149 Pfam PF04002 RadC-like JAB domain 25 147 5.6E-33 T 20-04-2016 IPR025657 RadC-like JAB domain APS56_RS15895 0b4d77119d6075f98a7613a97867a2ce 570 PANTHER PTHR11819 377 552 1.7E-108 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS15895 0b4d77119d6075f98a7613a97867a2ce 570 PANTHER PTHR11819 5 300 1.7E-108 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS15895 0b4d77119d6075f98a7613a97867a2ce 570 Pfam PF00474 Sodium:solute symporter family 388 518 4.7E-15 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS15895 0b4d77119d6075f98a7613a97867a2ce 570 Pfam PF00474 Sodium:solute symporter family 36 314 1.5E-25 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS00245 10e8a243fd06200da4b480aa4f02ee21 204 Gene3D G3DSA:3.40.50.300 6 202 2.3E-33 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00245 10e8a243fd06200da4b480aa4f02ee21 204 SMART SM00487 18 190 4.8E-8 T 20-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APS56_RS00245 10e8a243fd06200da4b480aa4f02ee21 204 PANTHER PTHR24031 5 202 2.4E-16 T 20-04-2016 APS56_RS00245 10e8a243fd06200da4b480aa4f02ee21 204 Pfam PF00270 DEAD/DEAH box helicase 24 166 4.9E-18 T 20-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APS56_RS00245 10e8a243fd06200da4b480aa4f02ee21 204 SUPERFAMILY SSF52540 6 201 3.06E-30 T 20-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APS56_RS00245 10e8a243fd06200da4b480aa4f02ee21 204 PANTHER PTHR24031:SF145 5 202 2.4E-16 T 20-04-2016 APS56_RS09285 a34d97f30b55244dab8954d86d4975f5 208 Pfam PF00484 Carbonic anhydrase 54 205 1.4E-39 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS09285 a34d97f30b55244dab8954d86d4975f5 208 SMART SM00947 46 208 1.9E-48 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS09285 a34d97f30b55244dab8954d86d4975f5 208 PANTHER PTHR11002 5 207 1.9E-71 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS09285 a34d97f30b55244dab8954d86d4975f5 208 Gene3D G3DSA:3.40.1050.10 3 207 7.3E-55 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS09285 a34d97f30b55244dab8954d86d4975f5 208 PANTHER PTHR11002:SF22 5 207 1.9E-71 T 20-04-2016 APS56_RS09285 a34d97f30b55244dab8954d86d4975f5 208 SUPERFAMILY SSF53056 4 207 8.24E-55 T 20-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APS56_RS06820 0fafe1820cd3cac4d01d826a5c4c5268 118 PANTHER PTHR41327 1 117 7.4E-13 T 20-04-2016 APS56_RS06820 0fafe1820cd3cac4d01d826a5c4c5268 118 SUPERFAMILY SSF159888 7 116 1.44E-23 T 20-04-2016 APS56_RS06820 0fafe1820cd3cac4d01d826a5c4c5268 118 Pfam PF08818 Domain of unknown function (DU1801) 21 111 2.1E-15 T 20-04-2016 IPR014922 Domain of unknown function DUF1801 APS56_RS13245 9edaee6a12ad18b7f0ae4667d50dea5e 193 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 26 184 3.1E-7 T 20-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS13245 9edaee6a12ad18b7f0ae4667d50dea5e 193 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 100 183 1.4E-13 T 20-04-2016 IPR026392 Exosortase/Archaeosortase domain APS56_RS15770 71cdf304fc30737c8c72d41c7183c9d0 374 PANTHER PTHR30273 163 373 5.7E-60 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS15770 71cdf304fc30737c8c72d41c7183c9d0 374 PANTHER PTHR30273 21 109 5.7E-60 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS15770 71cdf304fc30737c8c72d41c7183c9d0 374 PANTHER PTHR30273:SF2 163 373 5.7E-60 T 20-04-2016 APS56_RS15770 71cdf304fc30737c8c72d41c7183c9d0 374 PANTHER PTHR30273:SF2 21 109 5.7E-60 T 20-04-2016 APS56_RS15770 71cdf304fc30737c8c72d41c7183c9d0 374 Pfam PF16344 Domain of unknown function (DUF4974) 272 372 6.1E-22 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS15770 71cdf304fc30737c8c72d41c7183c9d0 374 Pfam PF04773 FecR protein 164 256 5.6E-14 T 20-04-2016 IPR006860 FecR protein APS56_RS04900 4a50ac34dbd6beee355aec20e20fb5a9 69 Pfam PF11127 Protein of unknown function (DUF2892) 5 60 5.6E-13 T 20-04-2016 IPR021309 Protein of unknown function DUF2892 APS56_RS11005 3d865af2c6f2c68fe1625e97695d3c6d 226 Pfam PF01810 LysE type translocator 13 206 1.6E-16 T 20-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APS56_RS01165 b894c5a475d5c710b0a1f0e4c073a37d 191 Pfam PF02893 GRAM domain 106 144 1.5E-4 T 20-04-2016 IPR004182 GRAM domain APS56_RS06160 39317983932a39f37f89f5b6ead736ba 554 Pfam PF02469 Fasciclin domain 50 183 3.1E-11 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06160 39317983932a39f37f89f5b6ead736ba 554 Pfam PF02469 Fasciclin domain 197 345 4.4E-8 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06160 39317983932a39f37f89f5b6ead736ba 554 SUPERFAMILY SSF82153 191 345 2.35E-10 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06160 39317983932a39f37f89f5b6ead736ba 554 PANTHER PTHR10900 39 345 3.1E-13 T 20-04-2016 APS56_RS06160 39317983932a39f37f89f5b6ead736ba 554 SUPERFAMILY SSF82153 39 183 1.57E-18 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06160 39317983932a39f37f89f5b6ead736ba 554 Gene3D G3DSA:2.30.180.10 39 184 8.5E-20 T 20-04-2016 IPR000782 FAS1 domain APS56_RS06160 39317983932a39f37f89f5b6ead736ba 554 Gene3D G3DSA:2.30.180.10 192 344 1.7E-9 T 20-04-2016 IPR000782 FAS1 domain APS56_RS04480 9ef74151863b43550956cdb62d0d1a22 206 Pfam PF07920 Protein of unknown function (DUF1684) 57 201 8.6E-45 T 20-04-2016 IPR012467 Protein of unknown function DUF1684 APS56_RS04480 9ef74151863b43550956cdb62d0d1a22 206 PANTHER PTHR41913:SF1 55 206 8.3E-23 T 20-04-2016 APS56_RS04480 9ef74151863b43550956cdb62d0d1a22 206 PANTHER PTHR41913 55 206 8.3E-23 T 20-04-2016 APS56_RS16000 9574bad9364f93f8a820c27524ff48b6 101 SUPERFAMILY SSF53098 29 101 1.08E-14 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS16000 9574bad9364f93f8a820c27524ff48b6 101 Gene3D G3DSA:3.30.420.10 29 99 6.1E-12 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS16000 9574bad9364f93f8a820c27524ff48b6 101 Pfam PF00665 Integrase core domain 32 101 1.2E-11 T 20-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APS56_RS16000 9574bad9364f93f8a820c27524ff48b6 101 PANTHER PTHR32552:SF23 6 101 1.6E-20 T 20-04-2016 APS56_RS16000 9574bad9364f93f8a820c27524ff48b6 101 PANTHER PTHR32552 6 101 1.6E-20 T 20-04-2016 APS56_RS03955 818fd8f09abbfaf92b800407f3492c9e 303 Gene3D G3DSA:3.20.20.190 13 302 5.0E-60 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS03955 818fd8f09abbfaf92b800407f3492c9e 303 SUPERFAMILY SSF51695 32 302 4.32E-54 T 20-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APS56_RS03955 818fd8f09abbfaf92b800407f3492c9e 303 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 38 296 8.2E-35 T 20-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APS56_RS03955 818fd8f09abbfaf92b800407f3492c9e 303 PANTHER PTHR23344 32 303 1.4E-37 T 20-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APS56_RS08245 e4329040bfd0b3f8edcfc5a8d95db2cc 183 TIGRFAM TIGR04128 exoso_Fjoh_1448: exosortase family protein XrtF 5 176 2.9E-70 T 20-04-2016 IPR026323 Exosortase-related protein XrtF APS56_RS08245 e4329040bfd0b3f8edcfc5a8d95db2cc 183 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 87 172 1.4E-15 T 20-04-2016 IPR026392 Exosortase/Archaeosortase domain APS56_RS08245 e4329040bfd0b3f8edcfc5a8d95db2cc 183 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 12 170 8.5E-9 T 20-04-2016 IPR019127 Exosortase EpsH-related KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS15810 83b27a9bbbc2ab46262298b3b6a35f8c 128 Gene3D G3DSA:3.30.530.20 2 126 3.9E-20 T 20-04-2016 IPR023393 START-like domain APS56_RS15810 83b27a9bbbc2ab46262298b3b6a35f8c 128 SUPERFAMILY SSF55961 2 127 2.62E-22 T 20-04-2016 APS56_RS15230 d90966702909c7f8bef899cb89339e5c 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 455 7.8E-69 T 20-04-2016 IPR000914 Solute-binding protein family 5 domain APS56_RS15230 d90966702909c7f8bef899cb89339e5c 542 PANTHER PTHR30290 37 536 3.2E-94 T 20-04-2016 APS56_RS15230 d90966702909c7f8bef899cb89339e5c 542 Gene3D G3DSA:3.90.76.10 46 210 1.0E-40 T 20-04-2016 APS56_RS15230 d90966702909c7f8bef899cb89339e5c 542 PIRSF PIRSF002741 17 538 1.0E-90 T 20-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APS56_RS15230 d90966702909c7f8bef899cb89339e5c 542 SUPERFAMILY SSF53850 38 536 8.96E-107 T 20-04-2016 APS56_RS15230 d90966702909c7f8bef899cb89339e5c 542 Gene3D G3DSA:3.10.105.10 296 509 1.5E-41 T 20-04-2016 APS56_RS02075 36294eac428b5d485505c0e310541c41 197 PANTHER PTHR30576 1 197 1.7E-78 T 20-04-2016 APS56_RS02075 36294eac428b5d485505c0e310541c41 197 Pfam PF02397 Bacterial sugar transferase 3 195 4.6E-55 T 20-04-2016 IPR003362 Bacterial sugar transferase APS56_RS03975 d06043e4003b44f2e2603f7c73f90f3c 306 Pfam PF04018 Domain of unknown function (DUF368) 18 260 1.1E-94 T 20-04-2016 IPR007163 Protein of unknown function DUF368 APS56_RS03975 d06043e4003b44f2e2603f7c73f90f3c 306 PANTHER PTHR37308 2 304 4.7E-69 T 20-04-2016 APS56_RS00385 3c04d8a3b70525a7927e41e08a95e822 140 PANTHER PTHR33797:SF1 1 139 4.7E-43 T 20-04-2016 APS56_RS00385 3c04d8a3b70525a7927e41e08a95e822 140 Pfam PF02566 OsmC-like protein 41 127 2.8E-16 T 20-04-2016 IPR003718 OsmC/Ohr family APS56_RS00385 3c04d8a3b70525a7927e41e08a95e822 140 Gene3D G3DSA:3.30.300.20 1 136 4.2E-41 T 20-04-2016 IPR015946 K homology domain-like, alpha/beta APS56_RS00385 3c04d8a3b70525a7927e41e08a95e822 140 SUPERFAMILY SSF82784 2 131 4.32E-29 T 20-04-2016 IPR003718 OsmC/Ohr family APS56_RS00385 3c04d8a3b70525a7927e41e08a95e822 140 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 2 134 1.5E-49 T 20-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 APS56_RS00385 3c04d8a3b70525a7927e41e08a95e822 140 PANTHER PTHR33797 1 139 4.7E-43 T 20-04-2016 APS56_RS04755 5ee9a93d27c7653d880e83c9a041f3f2 332 Pfam PF09952 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 193 327 2.6E-23 T 20-04-2016 IPR019238 Transcriptional regulator, AbiEi_2 antitoxin, Type IV TA system APS56_RS05695 8dc522fdf47677b30607b5657d7c33ce 411 Pfam PF12704 MacB-like periplasmic core domain 30 211 1.4E-11 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APS56_RS05695 8dc522fdf47677b30607b5657d7c33ce 411 PANTHER PTHR30489 30 411 5.2E-40 T 20-04-2016 APS56_RS05695 8dc522fdf47677b30607b5657d7c33ce 411 Pfam PF02687 FtsX-like permease family 280 404 1.1E-15 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS15680 a8c73f96ae7142b5d6e35344524caac9 416 Pfam PF13440 Polysaccharide biosynthesis protein 35 331 6.2E-11 T 20-04-2016 APS56_RS05065 5229680d8413fdff0f4ebd853d716779 369 Pfam PF07603 Protein of unknown function (DUF1566) 205 323 2.0E-19 T 20-04-2016 IPR011460 Protein of unknown function DUF1566 APS56_RS05065 5229680d8413fdff0f4ebd853d716779 369 Pfam PF07603 Protein of unknown function (DUF1566) 50 189 8.1E-19 T 20-04-2016 IPR011460 Protein of unknown function DUF1566 APS56_RS10845 ede3012486f8eb4dcab72fe82237c6a3 500 PANTHER PTHR31901 13 495 5.5E-45 T 20-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- APS56_RS10845 ede3012486f8eb4dcab72fe82237c6a3 500 PANTHER PTHR31901:SF5 13 495 5.5E-45 T 20-04-2016 APS56_RS10845 ede3012486f8eb4dcab72fe82237c6a3 500 Pfam PF03321 GH3 auxin-responsive promoter 21 176 1.3E-31 T 20-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- APS56_RS10845 ede3012486f8eb4dcab72fe82237c6a3 500 Pfam PF03321 GH3 auxin-responsive promoter 188 487 2.4E-56 T 20-04-2016 IPR004993 GH3 family KEGG: 00220+6.3.2.-|KEGG: 00261+6.3.2.-|KEGG: 00380+6.3.2.- APS56_RS00970 ec3673a1d12fcd3d2b8fcebbbf49052c 297 Gene3D G3DSA:2.60.120.200 41 240 4.4E-15 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS00970 ec3673a1d12fcd3d2b8fcebbbf49052c 297 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 73 228 6.8E-13 T 20-04-2016 APS56_RS00970 ec3673a1d12fcd3d2b8fcebbbf49052c 297 SUPERFAMILY SSF49899 53 229 5.12E-15 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS07350 28e83f44e49f77de1ab90b198b804a81 365 Pfam PF09411 Lipid A 3-O-deacylase (PagL) 53 191 9.9E-15 T 20-04-2016 IPR018550 Lipid A 3-O-deacylase-related APS56_RS07350 28e83f44e49f77de1ab90b198b804a81 365 Gene3D G3DSA:2.40.160.20 45 193 1.2E-22 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS03080 a70ab78d1bd26f9f9e81beb7485fd816 635 Pfam PF00474 Sodium:solute symporter family 34 472 7.4E-27 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS03080 a70ab78d1bd26f9f9e81beb7485fd816 635 PANTHER PTHR11819 2 572 2.6E-45 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS03080 a70ab78d1bd26f9f9e81beb7485fd816 635 PANTHER PTHR11819 609 627 2.6E-45 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 SUPERFAMILY SSF51126 27 495 1.24E-99 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 Pfam PF14592 Chondroitinase B 28 452 3.1E-195 T 20-04-2016 APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 SUPERFAMILY SSF51126 508 759 1.04E-27 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 Gene3D G3DSA:2.160.20.10 28 491 2.6E-114 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 Gene3D G3DSA:2.160.20.10 509 769 2.6E-35 T 20-04-2016 IPR012334 Pectin lyase fold APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 SMART SM00710 265 291 1700.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 SMART SM00710 397 416 2600.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 SMART SM00710 659 680 6900.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 SMART SM00710 243 264 9800.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 SMART SM00710 690 722 850.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS15075 9822b9145e1986ad9fb5e47426a2972a 770 SMART SM00710 628 649 1000.0 T 20-04-2016 IPR006626 Parallel beta-helix repeat APS56_RS15365 0daec88d023c7993514fef618b40c91d 157 Pfam PF14376 Haem-binding domain 13 144 6.2E-44 T 20-04-2016 IPR025992 Haem-binding domain APS56_RS15365 0daec88d023c7993514fef618b40c91d 157 SMART SM01235 12 147 5.8E-43 T 20-04-2016 IPR025992 Haem-binding domain APS56_RS12095 7b3a33ff456d62556ce9ec338a9d6b30 126 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 93 122 7.5E-6 T 20-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APS56_RS12095 7b3a33ff456d62556ce9ec338a9d6b30 126 PANTHER PTHR33823 8 126 2.0E-22 T 20-04-2016 APS56_RS12095 7b3a33ff456d62556ce9ec338a9d6b30 126 SUPERFAMILY SSF109635 10 94 4.05E-5 T 20-04-2016 APS56_RS00155 682feef146e374e6f55b4a4b6485a1fb 147 Pfam PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) 35 144 6.4E-41 T 20-04-2016 IPR029464 Type I restriction enzyme R protein, N-terminal domain APS56_RS08205 ad08eae8def5b5be1e0848cb706f52c3 168 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 12 160 2.5E-9 T 20-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APS56_RS12730 86a2d6a2fa915733ef0afe431ca7c28b 302 Pfam PF00483 Nucleotidyl transferase 9 272 1.4E-9 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APS56_RS12730 86a2d6a2fa915733ef0afe431ca7c28b 302 SUPERFAMILY SSF53448 7 287 8.56E-24 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS12730 86a2d6a2fa915733ef0afe431ca7c28b 302 Gene3D G3DSA:3.90.550.10 8 288 2.5E-22 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS07970 370ba76e6ff32e9b4d58709e8dc0071a 239 PANTHER PTHR23054:SF21 74 217 5.0E-21 T 20-04-2016 APS56_RS07970 370ba76e6ff32e9b4d58709e8dc0071a 239 Pfam PF04784 Protein of unknown function, DUF547 72 176 3.0E-29 T 20-04-2016 IPR006869 Domain of unknown function DUF547 APS56_RS07970 370ba76e6ff32e9b4d58709e8dc0071a 239 PANTHER PTHR23054 74 217 5.0E-21 T 20-04-2016 APS56_RS07220 7e1937a6ddb1a30254df64a1542c1073 168 Pfam PF04390 Lipopolysaccharide-assembly 12 162 4.4E-13 T 20-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APS56_RS12375 6d3af70a7f80e0e437ee550d3b36f908 432 PIRSF PIRSF006066 4 432 3.6E-153 T 20-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APS56_RS12375 6d3af70a7f80e0e437ee550d3b36f908 432 PANTHER PTHR33362 3 431 1.4E-165 T 20-04-2016 APS56_RS12375 6d3af70a7f80e0e437ee550d3b36f908 432 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 422 7.9E-110 T 20-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APS56_RS12375 6d3af70a7f80e0e437ee550d3b36f908 432 PANTHER PTHR33362:SF2 3 431 1.4E-165 T 20-04-2016 APS56_RS12375 6d3af70a7f80e0e437ee550d3b36f908 432 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 21 427 4.7E-136 T 20-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APS56_RS14585 c22837c549185af01ba80b56adac5ff4 217 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 3 202 1.4E-22 T 20-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APS56_RS14585 c22837c549185af01ba80b56adac5ff4 217 PANTHER PTHR30606 19 216 1.1E-22 T 20-04-2016 APS56_RS13420 a43eb438a15f08e91b24fe17030fd5f0 480 PIRSF PIRSF005522 3 480 4.2E-214 T 20-04-2016 IPR016450 Uncharacterised conserved protein UCP005522 APS56_RS13420 a43eb438a15f08e91b24fe17030fd5f0 480 PANTHER PTHR34595:SF3 10 480 2.1E-261 T 20-04-2016 APS56_RS13420 a43eb438a15f08e91b24fe17030fd5f0 480 PANTHER PTHR34595 10 480 2.1E-261 T 20-04-2016 APS56_RS13420 a43eb438a15f08e91b24fe17030fd5f0 480 SUPERFAMILY SSF56059 326 472 1.77E-53 T 20-04-2016 APS56_RS13420 a43eb438a15f08e91b24fe17030fd5f0 480 SUPERFAMILY SSF56059 27 221 1.77E-53 T 20-04-2016 APS56_RS13420 a43eb438a15f08e91b24fe17030fd5f0 480 Pfam PF14403 Circularly permuted ATP-grasp type 2 83 457 2.7E-155 T 20-04-2016 IPR025841 Circularly permuted ATP-grasp type 2 APS56_RS01870 f42ce3f4e368d7f86fa63972448f54c5 205 Pfam PF09335 SNARE associated Golgi protein 87 185 2.2E-9 T 20-04-2016 IPR032816 SNARE associated Golgi protein APS56_RS11955 0cb1184b78275e0b5258088d3d4d3578 516 SUPERFAMILY SSF53448 339 512 1.97E-14 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS11955 0cb1184b78275e0b5258088d3d4d3578 516 SUPERFAMILY SSF53448 89 281 1.97E-14 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS11955 0cb1184b78275e0b5258088d3d4d3578 516 Pfam PF14134 Domain of unknown function (DUF4301) 4 514 3.0E-210 T 20-04-2016 IPR025393 Domain of unknown function DUF4301 APS56_RS11900 3fe899f43ce292dfea6d5dc61bb7aff1 134 Gene3D G3DSA:3.30.70.100 48 109 2.4E-16 T 20-04-2016 APS56_RS11900 3fe899f43ce292dfea6d5dc61bb7aff1 134 Pfam PF00403 Heavy-metal-associated domain 51 108 1.6E-11 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS11900 3fe899f43ce292dfea6d5dc61bb7aff1 134 SUPERFAMILY SSF55008 45 109 4.58E-15 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS05235 67dec4c1ecfe5643fe22328332bed529 460 Pfam PF04932 O-Antigen ligase 240 385 6.9E-13 T 20-04-2016 IPR007016 O-antigen ligase-related APS56_RS12795 cf2d6c7ee4bf61ee33cbde46a966e37e 249 Gene3D G3DSA:3.50.30.50 21 244 1.1E-18 T 20-04-2016 APS56_RS12795 cf2d6c7ee4bf61ee33cbde46a966e37e 249 Pfam PF04199 Putative cyclase 21 183 6.6E-19 T 20-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 APS56_RS12795 cf2d6c7ee4bf61ee33cbde46a966e37e 249 SUPERFAMILY SSF102198 20 245 2.75E-18 T 20-04-2016 APS56_RS06015 a51ac19dcc78da7fb2ffbd4c77e72c5f 545 Pfam PF11175 Protein of unknown function (DUF2961) 276 516 1.9E-59 T 20-04-2016 IPR021345 Protein of unknown function DUF2961 APS56_RS03980 29bf0e38697e08179d8a0bef986541cf 339 Pfam PF04018 Domain of unknown function (DUF368) 20 282 4.3E-86 T 20-04-2016 IPR007163 Protein of unknown function DUF368 APS56_RS03980 29bf0e38697e08179d8a0bef986541cf 339 PANTHER PTHR37308 218 336 1.8E-52 T 20-04-2016 APS56_RS03980 29bf0e38697e08179d8a0bef986541cf 339 PANTHER PTHR37308 4 198 1.8E-52 T 20-04-2016 APS56_RS13555 d2454bc3ff549fb9a206f9cf12de2d5b 661 Pfam PF14121 Putative porin 65 660 1.2E-156 T 20-04-2016 IPR025631 Putative porin-10 APS56_RS04110 258bd79192f0846bd95c675ce0e7fe50 95 Gene3D G3DSA:1.10.1660.10 47 89 9.5E-4 T 20-04-2016 APS56_RS04110 258bd79192f0846bd95c675ce0e7fe50 95 SUPERFAMILY SSF46955 47 91 8.7E-9 T 20-04-2016 IPR009061 Putative DNA-binding domain APS56_RS04110 258bd79192f0846bd95c675ce0e7fe50 95 Pfam PF12728 Helix-turn-helix domain 47 94 7.6E-8 T 20-04-2016 APS56_RS05220 f18e33edb03106dd7810459714cdee0a 392 Pfam PF13387 Domain of unknown function (DUF4105) 30 164 7.2E-23 T 20-04-2016 IPR025178 Domain of unknown function DUF4105 APS56_RS15325 9a42ec9d638291168aa1bcda8107f8a5 326 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 259 326 6.3E-15 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS13350 f8d77f07067246425f13b8ad72d0c702 231 Pfam PF14329 Domain of unknown function (DUF4386) 11 218 7.3E-28 T 20-04-2016 IPR025495 Protein of unknown function DUF4386 APS56_RS02135 bc9c164f38983ffdbcb7fbf187bd56cb 498 Pfam PF01943 Polysaccharide biosynthesis protein 5 279 1.2E-20 T 20-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APS56_RS07035 fa78eaae9dbafde569d38180a1f8ccdb 309 Pfam PF12508 Protein of unknown function (DUF3714) 164 272 8.3E-19 T 20-04-2016 IPR022187 Conjugative transposon, TraM APS56_RS12710 040c026907270b2ea2fb6c3047ef9607 602 Pfam PF07980 SusD family 373 600 1.5E-31 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS12710 040c026907270b2ea2fb6c3047ef9607 602 SUPERFAMILY SSF48452 568 600 8.98E-83 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12710 040c026907270b2ea2fb6c3047ef9607 602 SUPERFAMILY SSF48452 16 497 8.98E-83 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12710 040c026907270b2ea2fb6c3047ef9607 602 Gene3D G3DSA:1.25.40.10 213 469 2.9E-28 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS12710 040c026907270b2ea2fb6c3047ef9607 602 Pfam PF14322 Starch-binding associating with outer membrane 49 201 4.0E-15 T 20-04-2016 APS56_RS13680 cdc1605d2e7b8762c1b1dbb6cc45e652 360 Pfam PF01636 Phosphotransferase enzyme family 23 259 2.8E-13 T 20-04-2016 IPR002575 Aminoglycoside phosphotransferase APS56_RS13680 cdc1605d2e7b8762c1b1dbb6cc45e652 360 Gene3D G3DSA:3.90.1200.10 171 349 3.4E-14 T 20-04-2016 APS56_RS13680 cdc1605d2e7b8762c1b1dbb6cc45e652 360 SUPERFAMILY SSF56112 6 352 1.1E-26 T 20-04-2016 IPR011009 Protein kinase-like domain APS56_RS02495 291083e4ba35ec6105107ef6870c8fb2 211 Pfam PF06197 Protein of unknown function (DUF998) 13 198 2.1E-24 T 20-04-2016 IPR009339 Protein of unknown function DUF998 APS56_RS06660 fb84eb6e1fa0b1559f70e8bebceec3b3 486 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 334 470 1.3E-7 T 20-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain APS56_RS04405 eb16673a39c48af5dd6304781e9fc9fe 60 PANTHER PTHR40613 1 58 3.6E-21 T 20-04-2016 APS56_RS04405 eb16673a39c48af5dd6304781e9fc9fe 60 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 1 50 1.0E-14 T 20-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor APS56_RS04405 eb16673a39c48af5dd6304781e9fc9fe 60 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 1 54 8.4E-28 T 20-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor APS56_RS04405 eb16673a39c48af5dd6304781e9fc9fe 60 PANTHER PTHR40613:SF1 1 58 3.6E-21 T 20-04-2016 APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 SUPERFAMILY SSF56059 273 467 4.65E-37 T 20-04-2016 APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 Gene3D G3DSA:3.30.470.20 280 291 1.7E-4 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 Gene3D G3DSA:3.30.470.20 363 454 1.7E-4 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 Gene3D G3DSA:3.30.1490.20 292 359 2.3E-11 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 Gene3D G3DSA:3.40.50.20 212 279 5.7E-5 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 PANTHER PTHR11609:SF4 158 481 4.4E-88 T 20-04-2016 APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 Pfam PF07478 D-ala D-ala ligase C-terminus 305 453 1.1E-9 T 20-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 Pfam PF14401 RimK-like ATPgrasp N-terminal domain 26 168 8.6E-45 T 20-04-2016 IPR025839 RimK-like ATPgrasp N-terminal domain APS56_RS02375 22ab5844a886f0baf65602899c4eda8e 481 PANTHER PTHR11609 158 481 4.4E-88 T 20-04-2016 APS56_RS02360 d5ee6adf3db976e871ca7d70f81bc4b7 108 PANTHER PTHR30561 1 108 4.6E-39 T 20-04-2016 APS56_RS02360 d5ee6adf3db976e871ca7d70f81bc4b7 108 SUPERFAMILY SSF103481 5 105 9.68E-15 T 20-04-2016 APS56_RS02360 d5ee6adf3db976e871ca7d70f81bc4b7 108 PANTHER PTHR30561:SF0 1 108 4.6E-39 T 20-04-2016 APS56_RS02360 d5ee6adf3db976e871ca7d70f81bc4b7 108 Pfam PF00893 Small Multidrug Resistance protein 1 95 2.6E-24 T 20-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APS56_RS02285 45fa9529dcf820ea7141e2b06d23ed4c 488 SUPERFAMILY SSF52374 253 388 1.61E-10 T 20-04-2016 APS56_RS02285 45fa9529dcf820ea7141e2b06d23ed4c 488 SUPERFAMILY SSF52374 422 473 1.61E-10 T 20-04-2016 APS56_RS11115 ae503d5862952716c0c290419482a513 378 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 312 378 1.7E-9 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS15590 701114f4f327b840515c16ca60f5ab6d 396 PANTHER PTHR30273 84 111 3.6E-65 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS15590 701114f4f327b840515c16ca60f5ab6d 396 PANTHER PTHR30273 186 395 3.6E-65 T 20-04-2016 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component APS56_RS15590 701114f4f327b840515c16ca60f5ab6d 396 Pfam PF04773 FecR protein 189 283 2.5E-15 T 20-04-2016 IPR006860 FecR protein APS56_RS15590 701114f4f327b840515c16ca60f5ab6d 396 PANTHER PTHR30273:SF2 84 111 3.6E-65 T 20-04-2016 APS56_RS15590 701114f4f327b840515c16ca60f5ab6d 396 PANTHER PTHR30273:SF2 186 395 3.6E-65 T 20-04-2016 APS56_RS15590 701114f4f327b840515c16ca60f5ab6d 396 Pfam PF16344 Domain of unknown function (DUF4974) 295 394 7.8E-24 T 20-04-2016 IPR032508 Protein FecR, C-terminal APS56_RS15255 e3815bcffb2be73fb1188c7ff43de3dc 376 PANTHER PTHR34219 3 375 2.6E-58 T 20-04-2016 APS56_RS15255 e3815bcffb2be73fb1188c7ff43de3dc 376 Pfam PF03929 PepSY-associated TM region 15 367 3.6E-59 T 20-04-2016 IPR005625 PepSY-associated TM protein APS56_RS01075 3de589cefdc206d9da1373228a22f818 80 Pfam PF09413 Putative prokaryotic signal transducing protein 8 73 4.3E-8 T 20-04-2016 IPR018551 Domain of unknown function DUF2007 APS56_RS06445 cfa09f1bf2a2f9808027035d99ae25fc 833 Pfam PF02687 FtsX-like permease family 710 821 4.2E-14 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS06445 cfa09f1bf2a2f9808027035d99ae25fc 833 Pfam PF02687 FtsX-like permease family 251 364 1.9E-17 T 20-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APS56_RS06445 cfa09f1bf2a2f9808027035d99ae25fc 833 Pfam PF12704 MacB-like periplasmic core domain 14 219 1.0E-9 T 20-04-2016 IPR025857 MacB-like periplasmic core domain APS56_RS06445 cfa09f1bf2a2f9808027035d99ae25fc 833 PANTHER PTHR30287 1 833 7.2E-102 T 20-04-2016 APS56_RS02155 508625d917706c0e75c576070a25c459 403 PANTHER PTHR12526 140 309 4.2E-25 T 20-04-2016 APS56_RS02155 508625d917706c0e75c576070a25c459 403 Gene3D G3DSA:3.40.50.2000 175 327 1.9E-12 T 20-04-2016 APS56_RS02155 508625d917706c0e75c576070a25c459 403 Pfam PF00534 Glycosyl transferases group 1 202 318 1.1E-22 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS02155 508625d917706c0e75c576070a25c459 403 SUPERFAMILY SSF53756 1 401 8.9E-44 T 20-04-2016 APS56_RS07900 46c28aa3c5df8206b65c613109ec4455 233 PANTHER PTHR42208:SF1 1 231 4.5E-30 T 20-04-2016 APS56_RS07900 46c28aa3c5df8206b65c613109ec4455 233 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 4 203 2.4E-55 T 20-04-2016 APS56_RS07900 46c28aa3c5df8206b65c613109ec4455 233 PANTHER PTHR42208 1 231 4.5E-30 T 20-04-2016 APS56_RS01085 f58214cec54111a540152894c3e73078 80 Pfam PF09413 Putative prokaryotic signal transducing protein 12 72 6.7E-9 T 20-04-2016 IPR018551 Domain of unknown function DUF2007 APS56_RS03960 916699287d5c1f307bc0b58eb21b60a4 582 Pfam PF13100 OstA-like protein 26 188 4.3E-39 T 20-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APS56_RS03960 916699287d5c1f307bc0b58eb21b60a4 582 Gene3D G3DSA:2.60.450.10 57 145 2.0E-11 T 20-04-2016 APS56_RS03960 916699287d5c1f307bc0b58eb21b60a4 582 Gene3D G3DSA:2.60.450.10 155 252 4.1E-10 T 20-04-2016 APS56_RS03960 916699287d5c1f307bc0b58eb21b60a4 582 Gene3D G3DSA:2.60.450.10 303 388 2.9E-9 T 20-04-2016 APS56_RS03960 916699287d5c1f307bc0b58eb21b60a4 582 Gene3D G3DSA:2.60.450.10 253 267 2.9E-9 T 20-04-2016 APS56_RS12780 e508d2b7ccbb8a6865adc4c737ebf746 212 SUPERFAMILY SSF56925 29 201 2.88E-6 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS12780 e508d2b7ccbb8a6865adc4c737ebf746 212 Pfam PF13505 Outer membrane protein beta-barrel domain 13 199 3.9E-11 T 20-04-2016 IPR027385 Outer membrane protein beta-barrel APS56_RS05720 c27d98d5ccb0645d69d1b65bc11e3304 575 Gene3D G3DSA:2.40.170.20 111 244 4.3E-18 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS05720 c27d98d5ccb0645d69d1b65bc11e3304 575 Gene3D G3DSA:2.40.170.20 279 573 4.3E-18 T 20-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APS56_RS05720 c27d98d5ccb0645d69d1b65bc11e3304 575 SUPERFAMILY SSF56935 100 573 1.61E-23 T 20-04-2016 APS56_RS07715 735fd4cf2a5b075f874325c1bb8f5c61 587 PANTHER PTHR33885 62 177 1.9E-20 T 20-04-2016 APS56_RS07715 735fd4cf2a5b075f874325c1bb8f5c61 587 Pfam PF04024 PspC domain 108 165 2.8E-21 T 20-04-2016 IPR007168 Phage shock protein, PspC, N-terminal APS56_RS10240 20cca06e14489e982be1ac4e5a45df14 445 SUPERFAMILY SSF52833 305 427 6.06E-17 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS10240 20cca06e14489e982be1ac4e5a45df14 445 Gene3D G3DSA:3.40.30.10 301 439 2.6E-31 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS10240 20cca06e14489e982be1ac4e5a45df14 445 Pfam PF00578 AhpC/TSA family 305 426 5.5E-13 T 20-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APS56_RS06770 4039ca226525b71947bd1b70667745d2 382 Gene3D G3DSA:2.60.40.10 253 351 1.1E-15 T 20-04-2016 IPR013783 Immunoglobulin-like fold APS56_RS06770 4039ca226525b71947bd1b70667745d2 382 PANTHER PTHR39198 1 382 9.2E-52 T 20-04-2016 APS56_RS06770 4039ca226525b71947bd1b70667745d2 382 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 158 229 1.4E-6 T 20-04-2016 IPR018905 Alpha-galactosidase, NEW3 domain APS56_RS06770 4039ca226525b71947bd1b70667745d2 382 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 262 337 9.1E-13 T 20-04-2016 IPR018905 Alpha-galactosidase, NEW3 domain APS56_RS14475 4387f1af71bd65bd3319f4f0ac7c3115 207 Pfam PF08889 WbqC-like protein family 8 149 5.7E-28 T 20-04-2016 IPR014985 WbqC-like protein family APS56_RS04245 dd089bc295d5e31c814d562c1dfc60cf 1718 Gene3D G3DSA:2.60.40.670 1467 1551 1.1E-4 T 20-04-2016 IPR000601 PKD domain APS56_RS04245 dd089bc295d5e31c814d562c1dfc60cf 1718 Pfam PF13585 C-terminal domain of CHU protein family 1635 1711 5.0E-12 T 20-04-2016 APS56_RS04245 dd089bc295d5e31c814d562c1dfc60cf 1718 TIGRFAM TIGR04131 Bac_Flav_CTERM: gliding motility-associated C-terminal domain 1633 1718 2.3E-34 T 20-04-2016 IPR026341 Gliding motility-associated, C-terminal domain APS56_RS00060 b59e0b9e5190feb3aa5441fca3655796 271 Pfam PF14054 Domain of unknown function (DUF4249) 7 252 1.6E-26 T 20-04-2016 IPR025345 Protein of unknown function DUF4249 APS56_RS01560 2e1e01e6f590212f0833ba34a877ac00 414 SUPERFAMILY SSF63829 355 397 3.92E-9 T 20-04-2016 APS56_RS01560 2e1e01e6f590212f0833ba34a877ac00 414 SUPERFAMILY SSF63829 210 253 3.92E-9 T 20-04-2016 APS56_RS01560 2e1e01e6f590212f0833ba34a877ac00 414 SUPERFAMILY SSF63829 35 182 3.92E-9 T 20-04-2016 APS56_RS01560 2e1e01e6f590212f0833ba34a877ac00 414 Gene3D G3DSA:2.120.10.30 208 269 2.2E-7 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS01560 2e1e01e6f590212f0833ba34a877ac00 414 Gene3D G3DSA:2.120.10.30 359 392 2.2E-7 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS01560 2e1e01e6f590212f0833ba34a877ac00 414 Gene3D G3DSA:2.120.10.30 36 112 2.2E-7 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS03550 740b8f5528d35c6b61a550be254fd5e4 108 SUPERFAMILY SSF55159 34 106 7.32E-18 T 20-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APS56_RS03550 740b8f5528d35c6b61a550be254fd5e4 108 Pfam PF01253 Translation initiation factor SUI1 35 101 5.5E-14 T 20-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APS56_RS03550 740b8f5528d35c6b61a550be254fd5e4 108 PIRSF PIRSF037511 2 108 2.5E-22 T 20-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 APS56_RS03550 740b8f5528d35c6b61a550be254fd5e4 108 Gene3D G3DSA:3.30.780.10 34 108 1.8E-26 T 20-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APS56_RS05595 b21149dd1f50bb413c4e314d69cdfaff 100 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 97 1.8E-15 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APS56_RS05595 b21149dd1f50bb413c4e314d69cdfaff 100 Gene3D G3DSA:3.30.160.100 1 99 2.3E-20 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APS56_RS05595 b21149dd1f50bb413c4e314d69cdfaff 100 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 99 7.6E-13 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APS56_RS05595 b21149dd1f50bb413c4e314d69cdfaff 100 SUPERFAMILY SSF69754 1 93 4.05E-20 T 20-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APS56_RS09990 2b122079589c6469167d7a8eaae286a5 105 Pfam PF02656 Domain of unknown function (DUF202) 26 84 4.8E-11 T 20-04-2016 IPR003807 Domain of unknown function DUF202 APS56_RS04350 4a49f3560f3bd78d55caee296b999fb9 184 Pfam PF11138 Protein of unknown function (DUF2911) 35 182 1.6E-49 T 20-04-2016 IPR021314 Protein of unknown function DUF2911 APS56_RS01795 1dbf06920a9ed9ea9da6667f13202bec 191 Pfam PF13548 Domain of unknown function (DUF4126) 9 182 3.8E-54 T 20-04-2016 IPR025196 Domain of unknown function DUF4126 APS56_RS16195 5b23146eba610ecd39151321c287333d 374 Gene3D G3DSA:3.40.630.30 238 368 1.7E-8 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS16195 5b23146eba610ecd39151321c287333d 374 SUPERFAMILY SSF55729 5 112 3.25E-21 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS16195 5b23146eba610ecd39151321c287333d 374 SUPERFAMILY SSF55729 140 357 3.25E-21 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS16195 5b23146eba610ecd39151321c287333d 374 PANTHER PTHR41368 1 373 4.9E-83 T 20-04-2016 APS56_RS07720 a8f4ebfa04c1aad215ee55869aa1a5c7 278 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 42 161 2.8E-13 T 20-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain APS56_RS08115 840f87e6fc3cca11ff567c1949b9e944 257 PANTHER PTHR30625:SF8 41 255 3.7E-63 T 20-04-2016 APS56_RS08115 840f87e6fc3cca11ff567c1949b9e944 257 PANTHER PTHR30625 41 255 3.7E-63 T 20-04-2016 APS56_RS08115 840f87e6fc3cca11ff567c1949b9e944 257 Pfam PF01618 MotA/TolQ/ExbB proton channel family 122 242 8.0E-30 T 20-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 36 42 - T 20-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 Gene3D G3DSA:3.40.50.150 9 257 1.4E-57 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PANTHER PTHR13370 59 268 2.0E-25 T 20-04-2016 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PANTHER PTHR13370 17 42 2.0E-25 T 20-04-2016 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 SUPERFAMILY SSF53335 14 252 1.73E-56 T 20-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PANTHER PTHR13370:SF8 59 268 2.0E-25 T 20-04-2016 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PANTHER PTHR13370:SF8 17 42 2.0E-25 T 20-04-2016 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 Pfam PF01555 DNA methylase 34 248 3.6E-48 T 20-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 209 227 2.8E-30 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 232 252 2.8E-30 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 190 207 2.8E-30 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 32 46 2.8E-30 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APS56_RS01855 938c34cc2772190c7b2ac6d9cc425a79 298 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 80 100 2.8E-30 T 20-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APS56_RS13365 deea550e012c07c44f6c46f319868c4f 125 Pfam PF07681 DoxX 6 88 5.4E-9 T 20-04-2016 IPR032808 DoxX family APS56_RS10325 c44de35d4b3d2c15f0c0f58022522a19 216 Pfam PF13568 Outer membrane protein beta-barrel domain 29 184 6.7E-28 T 20-04-2016 IPR025665 Outer membrane protein beta-barrel domain APS56_RS12045 a282d2be517ee622396cf295a9f5257e 551 Pfam PF14092 Domain of unknown function (DUF4270) 31 549 3.8E-86 T 20-04-2016 IPR025366 Protein of unknown function DUF4270 APS56_RS16245 a0109613caab6765009da3d4d048d77e 166 SUPERFAMILY SSF160574 70 166 2.22E-6 T 20-04-2016 APS56_RS13425 65407b84d1528735ca092d9ccbbf9e54 299 PANTHER PTHR34595 1 294 3.3E-40 T 20-04-2016 APS56_RS13425 65407b84d1528735ca092d9ccbbf9e54 299 PANTHER PTHR34595:SF2 1 294 3.3E-40 T 20-04-2016 APS56_RS13425 65407b84d1528735ca092d9ccbbf9e54 299 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 293 2.8E-55 T 20-04-2016 IPR007296 Domain of unknown function DUF403 APS56_RS09910 5652685af8dcc97bb7698a917afe579f 480 Gene3D G3DSA:3.20.20.80 301 465 2.2E-10 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS09910 5652685af8dcc97bb7698a917afe579f 480 Gene3D G3DSA:3.20.20.80 202 257 2.2E-10 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS09910 5652685af8dcc97bb7698a917afe579f 480 SUPERFAMILY SSF51445 290 431 4.23E-18 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS09910 5652685af8dcc97bb7698a917afe579f 480 SUPERFAMILY SSF51445 142 250 4.23E-18 T 20-04-2016 IPR017853 Glycoside hydrolase superfamily APS56_RS10615 12ab6cdc88ef4a603564b8f40961cf08 202 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 11 190 2.6E-26 T 20-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APS56_RS10615 12ab6cdc88ef4a603564b8f40961cf08 202 PANTHER PTHR36122 8 202 1.6E-33 T 20-04-2016 APS56_RS10615 12ab6cdc88ef4a603564b8f40961cf08 202 Pfam PF04973 Nicotinamide mononucleotide transporter 11 188 1.9E-47 T 20-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APS56_RS10615 12ab6cdc88ef4a603564b8f40961cf08 202 PANTHER PTHR36122:SF1 8 202 1.6E-33 T 20-04-2016 APS56_RS13145 27c7dccd05b91fafafaa2cea2fb99c67 219 SUPERFAMILY SSF54631 1 117 2.0E-15 T 20-04-2016 APS56_RS13145 27c7dccd05b91fafafaa2cea2fb99c67 219 Gene3D G3DSA:3.10.580.10 2 119 1.0E-9 T 20-04-2016 APS56_RS14665 5bf9e1974fbf4e85df7282c06287eb8f 150 Gene3D G3DSA:3.40.630.30 49 138 1.1E-15 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS14665 5bf9e1974fbf4e85df7282c06287eb8f 150 SUPERFAMILY SSF55729 14 146 7.15E-18 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS14665 5bf9e1974fbf4e85df7282c06287eb8f 150 Pfam PF00583 Acetyltransferase (GNAT) family 55 130 3.9E-9 T 20-04-2016 IPR000182 GNAT domain GO:0008080 APS56_RS15665 43e59d688100cd8729a6f75eac2e5ea5 150 Gene3D G3DSA:1.20.120.450 83 147 6.4E-5 T 20-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase APS56_RS15665 43e59d688100cd8729a6f75eac2e5ea5 150 Pfam PF07606 Protein of unknown function (DUF1569) 12 148 4.1E-6 T 20-04-2016 IPR011463 Protein of unknown function DUF1569 APS56_RS04190 941898050ace6568b5f9f32e80e6d6bd 251 Pfam PF00535 Glycosyl transferase family 2 6 114 1.3E-16 T 20-04-2016 IPR001173 Glycosyltransferase 2-like APS56_RS04190 941898050ace6568b5f9f32e80e6d6bd 251 Gene3D G3DSA:3.90.550.10 3 118 2.8E-11 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS04190 941898050ace6568b5f9f32e80e6d6bd 251 PANTHER PTHR10859:SF99 3 118 6.2E-16 T 20-04-2016 APS56_RS04190 941898050ace6568b5f9f32e80e6d6bd 251 PANTHER PTHR10859 3 118 6.2E-16 T 20-04-2016 APS56_RS04190 941898050ace6568b5f9f32e80e6d6bd 251 SUPERFAMILY SSF53448 1 153 3.44E-23 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS11270 578dcb0061dc717f6d49fcdf6b47a793 114 Pfam PF08888 HopJ type III effector protein 4 111 2.6E-45 T 20-04-2016 IPR014984 HopJ type III effector protein APS56_RS11270 578dcb0061dc717f6d49fcdf6b47a793 114 Gene3D G3DSA:3.20.160.10 1 114 5.8E-46 T 20-04-2016 APS56_RS07965 b969853589c68b0c3e06e06879a72319 296 Pfam PF04116 Fatty acid hydroxylase superfamily 122 259 2.7E-26 T 20-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 APS56_RS16170 60b34cbf4cbea20f17dde448f45c2697 818 SUPERFAMILY SSF56935 637 789 1.79E-12 T 20-04-2016 APS56_RS16170 60b34cbf4cbea20f17dde448f45c2697 818 Gene3D G3DSA:2.170.130.10 593 720 1.3E-7 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS16170 60b34cbf4cbea20f17dde448f45c2697 818 Pfam PF07715 TonB-dependent Receptor Plug Domain 637 711 6.9E-6 T 20-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APS56_RS04705 5f2c7c049e3b94c312be76918ea18990 368 Gene3D G3DSA:1.20.120.330 164 251 8.2E-5 T 20-04-2016 APS56_RS08125 2fabc6b8198c3b0f1541be60e2b551fa 197 Pfam PF02472 Biopolymer transport protein ExbD/TolR 3 140 5.7E-19 T 20-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APS56_RS08125 2fabc6b8198c3b0f1541be60e2b551fa 197 PANTHER PTHR30558 1 89 2.1E-14 T 20-04-2016 APS56_RS08125 2fabc6b8198c3b0f1541be60e2b551fa 197 PANTHER PTHR30558 108 140 2.1E-14 T 20-04-2016 APS56_RS11550 75377eae9bccef442b44f75b99c26f69 261 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 181 261 7.0E-14 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS04760 d8248cded7ee6bfe56907a747ca952b5 280 SUPERFAMILY SSF81301 17 168 3.6E-5 T 20-04-2016 APS56_RS04760 d8248cded7ee6bfe56907a747ca952b5 280 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 32 214 8.8E-8 T 20-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system APS56_RS09485 0dc755a94af579287d68f6b2419f2aef 118 SUPERFAMILY SSF82185 38 105 2.75E-10 T 20-04-2016 APS56_RS09485 0dc755a94af579287d68f6b2419f2aef 118 Gene3D G3DSA:2.20.110.10 38 106 1.9E-5 T 20-04-2016 APS56_RS05155 4c727e52568a1207f650693ade277431 128 SMART SM00712 11 82 0.0037 T 20-04-2016 IPR006628 Purine-rich element binding protein family APS56_RS05155 4c727e52568a1207f650693ade277431 128 Pfam PF11680 Protein of unknown function (DUF3276) 4 125 5.5E-51 T 20-04-2016 IPR021694 Protein of unknown function DUF3276 APS56_RS09385 b85cac975ba9a45f1e7ec66076cb6241 191 Pfam PF11307 Protein of unknown function (DUF3109) 1 181 4.6E-80 T 20-04-2016 IPR021458 Protein of unknown function DUF3109 APS56_RS07345 7b510fe2caf1b999ee7b8b4879de9be5 249 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 41 233 8.3E-33 T 20-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain APS56_RS10345 3b4910b76935d324b3f0196fe468ffca 247 SMART SM00563 76 195 1.9E-11 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS10345 3b4910b76935d324b3f0196fe468ffca 247 SUPERFAMILY SSF69593 11 244 8.11E-27 T 20-04-2016 APS56_RS10345 3b4910b76935d324b3f0196fe468ffca 247 Gene3D G3DSA:3.40.1130.10 68 232 1.8E-11 T 20-04-2016 APS56_RS10345 3b4910b76935d324b3f0196fe468ffca 247 PANTHER PTHR10434 1 220 1.8E-21 T 20-04-2016 APS56_RS10345 3b4910b76935d324b3f0196fe468ffca 247 Pfam PF01553 Acyltransferase 64 192 1.2E-16 T 20-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APS56_RS05270 4dcc30f63dc9193d86e587a80aab8ed3 461 SUPERFAMILY SSF53756 121 438 1.18E-11 T 20-04-2016 APS56_RS12450 fe74ef559f011f2ab1c9b716cf7a486a 124 Gene3D G3DSA:1.20.120.330 4 83 1.1E-4 T 20-04-2016 APS56_RS12450 fe74ef559f011f2ab1c9b716cf7a486a 124 Pfam PF05168 HEPN domain 7 79 3.8E-5 T 20-04-2016 IPR007842 HEPN domain APS56_RS16215 33c51f1b6e02d0e8ceb69877e4a215de 426 SUPERFAMILY SSF53756 5 80 5.71E-21 T 20-04-2016 APS56_RS16215 33c51f1b6e02d0e8ceb69877e4a215de 426 SUPERFAMILY SSF53756 111 396 5.71E-21 T 20-04-2016 APS56_RS16215 33c51f1b6e02d0e8ceb69877e4a215de 426 Pfam PF13439 Glycosyltransferase Family 4 113 235 1.4E-6 T 20-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APS56_RS04635 5ef57b68711172ab3358ef0e2677483f 472 SUPERFAMILY SSF49785 294 367 2.31E-5 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS04635 5ef57b68711172ab3358ef0e2677483f 472 Gene3D G3DSA:2.60.120.260 299 367 3.7E-6 T 20-04-2016 IPR008979 Galactose-binding domain-like APS56_RS04635 5ef57b68711172ab3358ef0e2677483f 472 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 401 472 5.6E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS03395 ba17be4567527cfa1fd7618e21250a9b 347 Pfam PF07786 Protein of unknown function (DUF1624) 1 197 1.2E-16 T 20-04-2016 IPR012429 Protein of unknown function DUF1624 KEGG: 00531+2.3.1.78 APS56_RS09095 6205e75d35c4ce293c6caf64c828f0d5 244 Gene3D G3DSA:1.25.40.10 134 233 1.2E-4 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS09095 6205e75d35c4ce293c6caf64c828f0d5 244 SUPERFAMILY SSF48452 132 243 9.16E-9 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13150 fca1c6d2d54aea73421d6bacc855443f 237 PANTHER PTHR30456:SF0 1 234 1.6E-95 T 20-04-2016 APS56_RS13150 fca1c6d2d54aea73421d6bacc855443f 237 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 3 234 1.0E-85 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APS56_RS13150 fca1c6d2d54aea73421d6bacc855443f 237 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 237 78.259 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APS56_RS13150 fca1c6d2d54aea73421d6bacc855443f 237 Gene3D G3DSA:3.20.20.70 1 236 1.0E-84 T 20-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APS56_RS13150 fca1c6d2d54aea73421d6bacc855443f 237 PANTHER PTHR30456 1 234 1.6E-95 T 20-04-2016 APS56_RS13150 fca1c6d2d54aea73421d6bacc855443f 237 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 3 237 2.3E-73 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APS56_RS13150 fca1c6d2d54aea73421d6bacc855443f 237 SUPERFAMILY SSF63892 1 236 5.75E-82 T 20-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APS56_RS11865 89e7f8674e40905671e585be2b5ae172 310 Pfam PF11276 Protein of unknown function (DUF3078) 68 164 1.1E-15 T 20-04-2016 IPR021428 Protein of unknown function DUF3078 APS56_RS13725 3ca289b6707aa6d559b3c1f6fd057d9c 573 SUPERFAMILY SSF48452 20 573 5.94E-110 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13725 3ca289b6707aa6d559b3c1f6fd057d9c 573 Pfam PF14322 Starch-binding associating with outer membrane 110 238 7.8E-27 T 20-04-2016 APS56_RS13725 3ca289b6707aa6d559b3c1f6fd057d9c 573 Gene3D G3DSA:1.25.40.10 398 497 3.7E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13725 3ca289b6707aa6d559b3c1f6fd057d9c 573 Gene3D G3DSA:1.25.40.10 218 336 3.7E-34 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS13725 3ca289b6707aa6d559b3c1f6fd057d9c 573 Pfam PF07980 SusD family 288 573 3.3E-43 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS06130 20c8bbc688f5492519c5c08c90774f84 363 SUPERFAMILY SSF75005 35 340 8.17E-21 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS06130 20c8bbc688f5492519c5c08c90774f84 363 Gene3D G3DSA:2.115.10.20 46 208 7.2E-10 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS06130 20c8bbc688f5492519c5c08c90774f84 363 Gene3D G3DSA:2.115.10.20 209 333 6.3E-5 T 20-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APS56_RS08380 b32ec430605eeec4a602f4657329f443 283 Pfam PF09697 Protein of unknown function (Porph_ging) 138 217 1.8E-30 T 20-04-2016 IPR005901 GLPGLI family protein APS56_RS08380 b32ec430605eeec4a602f4657329f443 283 TIGRFAM TIGR01200 GLPGLI: GLPGLI family protein 10 262 4.0E-53 T 20-04-2016 IPR005901 GLPGLI family protein APS56_RS16430 e46aa40356c0a575cf8c02f133e5b3bf 170 PANTHER PTHR21366 12 165 3.6E-49 T 20-04-2016 APS56_RS16430 e46aa40356c0a575cf8c02f133e5b3bf 170 SUPERFAMILY SSF54593 4 157 2.55E-25 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS16430 e46aa40356c0a575cf8c02f133e5b3bf 170 PANTHER PTHR21366:SF16 12 165 3.6E-49 T 20-04-2016 APS56_RS16430 e46aa40356c0a575cf8c02f133e5b3bf 170 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 154 3.9E-12 T 20-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APS56_RS16430 e46aa40356c0a575cf8c02f133e5b3bf 170 Gene3D G3DSA:3.10.180.10 3 157 1.2E-27 T 20-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APS56_RS03490 7311e9a66f22e4f85fb974aa0aae50ac 205 Gene3D G3DSA:2.60.130.10 16 196 1.0E-16 T 20-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APS56_RS03490 7311e9a66f22e4f85fb974aa0aae50ac 205 SUPERFAMILY SSF49482 41 197 7.59E-17 T 20-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APS56_RS00250 65c0f43d9bf8b14be02b5752b1d45a9d 224 Pfam PF13367 Protease prsW family 27 197 3.6E-35 T 20-04-2016 IPR026898 Protease PrsW GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS00250 65c0f43d9bf8b14be02b5752b1d45a9d 224 PIRSF PIRSF016933 1 224 5.7E-58 T 20-04-2016 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APS56_RS00250 65c0f43d9bf8b14be02b5752b1d45a9d 224 PANTHER PTHR36844 1 215 5.9E-39 T 20-04-2016 APS56_RS04865 45443f1d39c3ce505f651dac271a9590 439 Pfam PF00589 Phage integrase family 254 420 3.8E-5 T 20-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS04865 45443f1d39c3ce505f651dac271a9590 439 Gene3D G3DSA:1.10.150.130 149 236 2.7E-4 T 20-04-2016 IPR023109 Integrase/recombinase, N-terminal APS56_RS04865 45443f1d39c3ce505f651dac271a9590 439 Gene3D G3DSA:1.10.443.10 249 421 6.0E-15 T 20-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APS56_RS04865 45443f1d39c3ce505f651dac271a9590 439 SUPERFAMILY SSF56349 138 425 5.89E-29 T 20-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APS56_RS11055 8f0c552dcd3fd91e6d7c7c8b6721a245 614 SUPERFAMILY SSF55486 304 516 4.76E-33 T 20-04-2016 APS56_RS11055 8f0c552dcd3fd91e6d7c7c8b6721a245 614 PANTHER PTHR11533:SF185 137 507 2.9E-21 T 20-04-2016 APS56_RS11055 8f0c552dcd3fd91e6d7c7c8b6721a245 614 Pfam PF01433 Peptidase family M1 318 456 1.9E-6 T 20-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APS56_RS11055 8f0c552dcd3fd91e6d7c7c8b6721a245 614 PANTHER PTHR11533 137 507 2.9E-21 T 20-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APS56_RS11055 8f0c552dcd3fd91e6d7c7c8b6721a245 614 Gene3D G3DSA:1.10.390.10 385 516 8.5E-18 T 20-04-2016 APS56_RS16255 e31b559b159fa51756cc7b22da9fcc2f 296 SUPERFAMILY SSF63829 34 294 1.34E-23 T 20-04-2016 APS56_RS16255 e31b559b159fa51756cc7b22da9fcc2f 296 Gene3D G3DSA:2.120.10.30 43 293 1.3E-12 T 20-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APS56_RS01090 264edad60042e9d11d775251d9a795cc 283 Gene3D G3DSA:1.20.144.10 91 249 2.7E-24 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APS56_RS01090 264edad60042e9d11d775251d9a795cc 283 Pfam PF01569 PAP2 superfamily 140 243 2.2E-13 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APS56_RS01090 264edad60042e9d11d775251d9a795cc 283 SUPERFAMILY SSF48317 112 250 1.02E-20 T 20-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APS56_RS09305 fdfdeb3c7916dbb422db9568762f3e06 421 PANTHER PTHR41339 24 420 6.6E-23 T 20-04-2016 APS56_RS09305 fdfdeb3c7916dbb422db9568762f3e06 421 SUPERFAMILY SSF51126 179 332 2.07E-7 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09305 fdfdeb3c7916dbb422db9568762f3e06 421 SUPERFAMILY SSF51126 53 136 2.07E-7 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS13185 740631046398dd98826d53b90e35192f 263 Pfam PF10977 Protein of unknown function (DUF2797) 37 258 2.3E-86 T 20-04-2016 IPR021246 Protein of unknown function DUF2797 APS56_RS15210 036e9dcfb30746dc40510667fd4bd073 177 Pfam PF13858 Protein of unknown function (DUF4199) 12 171 1.3E-25 T 20-04-2016 IPR025250 Protein of unknown function DUF4199 APS56_RS02170 d536d39e027ace59de39f8b584c5e3e0 370 Pfam PF14897 EpsG family 48 364 3.4E-27 T 20-04-2016 APS56_RS15675 71ae4880ea7e170165384b4caf1e2f43 123 Gene3D G3DSA:3.30.750.24 36 108 1.3E-6 T 20-04-2016 IPR002645 STAS domain APS56_RS15675 71ae4880ea7e170165384b4caf1e2f43 123 SUPERFAMILY SSF52091 34 108 1.33E-7 T 20-04-2016 IPR002645 STAS domain APS56_RS16220 17c513732fcc5b238ef08c92fa5c81d6 489 Pfam PF01943 Polysaccharide biosynthesis protein 12 261 4.6E-10 T 20-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APS56_RS04440 7b818dfdf5678478f977b32c0326236f 127 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 4 125 1.9E-18 T 20-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like APS56_RS04440 7b818dfdf5678478f977b32c0326236f 127 SUPERFAMILY SSF110857 3 126 1.57E-20 T 20-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APS56_RS04440 7b818dfdf5678478f977b32c0326236f 127 Gene3D G3DSA:3.10.490.10 1 125 2.1E-21 T 20-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APS56_RS10935 b30a107a68f1c3ce4fbfff817482c21c 269 Pfam PF14257 Domain of unknown function (DUF4349) 43 260 5.4E-61 T 20-04-2016 IPR025645 Domain of unknown function DUF4349 APS56_RS02235 dc0325448c7a3c5ede7697a971c57aa0 364 Gene3D G3DSA:3.40.630.30 146 306 6.4E-30 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS02235 dc0325448c7a3c5ede7697a971c57aa0 364 SUPERFAMILY SSF55729 157 325 5.83E-29 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS02235 dc0325448c7a3c5ede7697a971c57aa0 364 Pfam PF13480 Acetyltransferase (GNAT) domain 156 301 1.7E-11 T 20-04-2016 APS56_RS14920 9f363583fe9b25e8c89833c2122983c0 136 PANTHER PTHR34980 1 129 1.1E-31 T 20-04-2016 APS56_RS14920 9f363583fe9b25e8c89833c2122983c0 136 Pfam PF05656 Protein of unknown function (DUF805) 12 120 2.4E-34 T 20-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APS56_RS00805 5becc0b7b739e989238a214d97b4e086 187 SUPERFAMILY SSF54427 54 163 8.99E-8 T 20-04-2016 IPR032710 NTF2-like domain APS56_RS07625 fe3cdebff8957754dde66cde6aa35545 239 PANTHER PTHR38480:SF1 1 235 6.7E-30 T 20-04-2016 APS56_RS07625 fe3cdebff8957754dde66cde6aa35545 239 Pfam PF06271 RDD family 19 142 4.8E-20 T 20-04-2016 IPR010432 RDD APS56_RS07625 fe3cdebff8957754dde66cde6aa35545 239 PANTHER PTHR38480 1 235 6.7E-30 T 20-04-2016 APS56_RS00280 7f76c818e35efa0342a09e2cb8195ab9 142 Pfam PF14088 Domain of unknown function (DUF4268) 10 136 5.3E-25 T 20-04-2016 IPR025364 Domain of unknown function DUF4268 APS56_RS05995 f1e2615779d0ba88905e4b4d04da13fa 468 Pfam PF13229 Right handed beta helix region 185 335 1.5E-7 T 20-04-2016 APS56_RS05995 f1e2615779d0ba88905e4b4d04da13fa 468 SUPERFAMILY SSF51126 100 339 3.89E-14 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS15110 ff11281db0e2c19a3da7d2495229e515 366 Gene3D G3DSA:2.60.120.200 292 349 5.3E-45 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15110 ff11281db0e2c19a3da7d2495229e515 366 Gene3D G3DSA:2.60.120.200 45 254 5.3E-45 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15110 ff11281db0e2c19a3da7d2495229e515 366 Pfam PF08787 Alginate lyase 54 350 4.8E-66 T 20-04-2016 IPR014895 Alginate lyase 2 APS56_RS15110 ff11281db0e2c19a3da7d2495229e515 366 SUPERFAMILY SSF49899 286 314 5.86E-22 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS15110 ff11281db0e2c19a3da7d2495229e515 366 SUPERFAMILY SSF49899 56 243 5.86E-22 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS12775 479126efcf30ca5a0a551265106c112e 323 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 15 307 6.4E-12 T 20-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APS56_RS12615 b3bfd10899124a8fce4d862921ce712e 309 Gene3D G3DSA:3.40.50.410 84 260 2.2E-4 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS12615 b3bfd10899124a8fce4d862921ce712e 309 SUPERFAMILY SSF53300 76 256 2.05E-24 T 20-04-2016 IPR002035 von Willebrand factor, type A APS56_RS12615 b3bfd10899124a8fce4d862921ce712e 309 Pfam PF01882 Protein of unknown function DUF58 42 131 7.2E-15 T 20-04-2016 IPR002881 Domain of unknown function DUF58 APS56_RS12615 b3bfd10899124a8fce4d862921ce712e 309 PANTHER PTHR33608 15 306 9.2E-66 T 20-04-2016 APS56_RS12615 b3bfd10899124a8fce4d862921ce712e 309 PANTHER PTHR33608:SF2 15 306 9.2E-66 T 20-04-2016 APS56_RS06525 fe9a3087fbaa3900a287bfd6e307732a 125 Pfam PF07681 DoxX 7 89 3.3E-6 T 20-04-2016 IPR032808 DoxX family APS56_RS03365 f5251b080ff21b8aa9d9c18448a5c230 360 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 291 360 1.6E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS02220 a1c9eb5a724ae68e8c30222af7bd88cd 353 SUPERFAMILY SSF53383 17 347 2.55E-6 T 20-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APS56_RS11575 61e256cbc71bc678d05e2273b49745ea 163 Pfam PF10029 Predicted periplasmic protein (DUF2271) 30 156 2.0E-40 T 20-04-2016 IPR014469 Protein of unknown function DUF2271 APS56_RS06350 0c519b235264f2c1e9d08dee95789d2b 495 PANTHER PTHR11819:SF141 4 490 1.3E-100 T 20-04-2016 APS56_RS06350 0c519b235264f2c1e9d08dee95789d2b 495 Pfam PF00474 Sodium:solute symporter family 35 432 6.9E-29 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS06350 0c519b235264f2c1e9d08dee95789d2b 495 PANTHER PTHR11819 4 490 1.3E-100 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS10140 a564f5d30e564ac5a181642864a2b690 267 Gene3D G3DSA:2.40.160.20 148 264 2.4E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS07510 33d1b4dfd8a18c5ea7e69bae03be18bd 216 SUPERFAMILY SSF55729 81 148 1.66E-5 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS07510 33d1b4dfd8a18c5ea7e69bae03be18bd 216 Gene3D G3DSA:3.40.630.30 88 148 2.5E-4 T 20-04-2016 IPR016181 Acyl-CoA N-acyltransferase APS56_RS06540 5f8d9a2d9274317119d82e5e3c0df137 173 Pfam PF13590 Domain of unknown function (DUF4136) 21 171 2.2E-23 T 20-04-2016 IPR025411 Domain of unknown function DUF4136 APS56_RS05265 f66e7ae83707e5bef4002622464668e8 361 Pfam PF00534 Glycosyl transferases group 1 182 332 2.0E-32 T 20-04-2016 IPR001296 Glycosyl transferase, family 1 APS56_RS05265 f66e7ae83707e5bef4002622464668e8 361 PANTHER PTHR12526 130 360 4.8E-38 T 20-04-2016 APS56_RS05265 f66e7ae83707e5bef4002622464668e8 361 Gene3D G3DSA:3.40.50.2000 188 330 1.1E-17 T 20-04-2016 APS56_RS05265 f66e7ae83707e5bef4002622464668e8 361 SUPERFAMILY SSF53756 54 360 2.2E-47 T 20-04-2016 APS56_RS15785 db0db13bbb28e5ca628b5da8c8fc8374 535 Pfam PF16370 C terminal of Calcineurin-like phosphoesterase 327 500 3.4E-33 T 20-04-2016 IPR032288 Calcineurin-like phosphoesterase, C-terminal APS56_RS15785 db0db13bbb28e5ca628b5da8c8fc8374 535 Pfam PF16371 N terminal of Calcineurin-like phosphoesterase 40 108 1.7E-13 T 20-04-2016 IPR032285 Calcineurin-like phosphoesterase, N-terminal APS56_RS15785 db0db13bbb28e5ca628b5da8c8fc8374 535 Gene3D G3DSA:3.60.21.10 115 375 5.3E-19 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS15785 db0db13bbb28e5ca628b5da8c8fc8374 535 SUPERFAMILY SSF56300 117 372 5.2E-22 T 20-04-2016 IPR029052 Metallo-dependent phosphatase-like APS56_RS01065 32c452cbc757d3359b4a3a173a786383 473 Gene3D G3DSA:3.40.30.10 331 458 3.8E-8 T 20-04-2016 IPR012336 Thioredoxin-like fold APS56_RS05205 4616e7d1358bf2c99e9682fd7f245724 292 PIRSF PIRSF016660 1 292 3.3E-95 T 20-04-2016 IPR008526 Inner membrane protein YedI APS56_RS05205 4616e7d1358bf2c99e9682fd7f245724 292 PANTHER PTHR30503 1 287 2.5E-68 T 20-04-2016 APS56_RS05205 4616e7d1358bf2c99e9682fd7f245724 292 Pfam PF05661 Protein of unknown function (DUF808) 3 266 3.7E-92 T 20-04-2016 IPR008526 Inner membrane protein YedI APS56_RS10195 de48b97572fc6ea9ebc7980b284787bf 293 Pfam PF06439 Domain of Unknown Function (DUF1080) 29 276 3.0E-24 T 20-04-2016 IPR010496 Domain of unknown function DUF1080 APS56_RS14155 6468c879dc1225a1e9b0d33475740867 512 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 438 511 2.3E-11 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS14155 6468c879dc1225a1e9b0d33475740867 512 Pfam PF07394 Protein of unknown function (DUF1501) 252 365 2.4E-16 T 20-04-2016 IPR010869 Protein of unknown function DUF1501 APS56_RS06905 9b20d6f07da499d97cd7d1bf7dc0457e 202 Pfam PF06197 Protein of unknown function (DUF998) 10 189 1.2E-23 T 20-04-2016 IPR009339 Protein of unknown function DUF998 APS56_RS03485 fbddb834bce95b31a46f4690daca864a 181 Pfam PF14059 Domain of unknown function (DUF4251) 27 176 8.6E-30 T 20-04-2016 IPR025347 Protein of unknown function DUF4251 APS56_RS05755 40e239dbfd632a45b80ac672a48fd00f 379 SUPERFAMILY SSF53756 15 375 2.62E-15 T 20-04-2016 APS56_RS05755 40e239dbfd632a45b80ac672a48fd00f 379 Pfam PF13524 Glycosyl transferases group 1 294 374 1.0E-8 T 20-04-2016 APS56_RS11400 a06b6627e3e83b461e9111912cb0be98 278 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 213 277 2.4E-10 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS05290 62639843bd9ca56ae63187f290f7ba81 301 Pfam PF01531 Glycosyl transferase family 11 54 226 1.4E-20 T 20-04-2016 IPR002516 Glycosyl transferase, family 11 GO:0005975|GO:0008107|GO:0016020 KEGG: 00601+2.4.1.69|KEGG: 00603+2.4.1.69|UniPathway: UPA00378 APS56_RS15105 121d4a65484ad13bcff28ac465ad3b87 424 Pfam PF01566 Natural resistance-associated macrophage protein 37 395 8.1E-70 T 20-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APS56_RS13675 fcd245dcab620d34c45daf776fa9c08c 300 Gene3D G3DSA:3.90.550.10 6 293 4.4E-21 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS13675 fcd245dcab620d34c45daf776fa9c08c 300 Pfam PF00483 Nucleotidyl transferase 7 270 1.5E-10 T 20-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APS56_RS13675 fcd245dcab620d34c45daf776fa9c08c 300 SUPERFAMILY SSF53448 4 285 4.06E-22 T 20-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APS56_RS05640 dc4259cf55df42c069fd8a060de137db 423 Pfam PF11013 Protein of unknown function (DUF2851) 3 376 1.4E-148 T 20-04-2016 IPR021272 Protein of unknown function DUF2851 APS56_RS14635 dde3e2f7da179aaecfa24c1c780709d9 365 PANTHER PTHR31061:SF1 2 365 3.3E-46 T 20-04-2016 APS56_RS14635 dde3e2f7da179aaecfa24c1c780709d9 365 PANTHER PTHR31061 2 365 3.3E-46 T 20-04-2016 APS56_RS14635 dde3e2f7da179aaecfa24c1c780709d9 365 Pfam PF16401 Domain of unknown function (DUF5009) 9 168 2.3E-9 T 20-04-2016 IPR032176 Domain of unknown function DUF5009 APS56_RS14845 ed44e6b7ec1fa9bf6f144dd298315adf 185 Pfam PF03793 PASTA domain 45 107 6.1E-9 T 20-04-2016 IPR005543 PASTA domain APS56_RS14845 ed44e6b7ec1fa9bf6f144dd298315adf 185 Pfam PF03793 PASTA domain 116 178 2.4E-6 T 20-04-2016 IPR005543 PASTA domain APS56_RS14845 ed44e6b7ec1fa9bf6f144dd298315adf 185 SMART SM00740 110 180 0.0034 T 20-04-2016 IPR005543 PASTA domain APS56_RS14845 ed44e6b7ec1fa9bf6f144dd298315adf 185 SMART SM00740 40 108 0.0016 T 20-04-2016 IPR005543 PASTA domain APS56_RS03435 41fc609f5fd36c20b3e93ecf7695345c 1101 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 1028 1101 1.5E-8 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS11495 545c15506539373e0ab2a49c12f4a9d3 377 Pfam PF04326 Putative DNA-binding domain 17 142 3.6E-10 T 20-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 APS56_RS06815 14581c22c87dcb3d6c46c1aab54a8c3b 117 Pfam PF13788 Domain of unknown function (DUF4180) 9 117 8.4E-40 T 20-04-2016 IPR025438 Domain of unknown function DUF4180 APS56_RS09870 678aaabd0fbdc5879b881d2a8b6cc613 544 SUPERFAMILY SSF51126 259 543 4.04E-19 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09870 678aaabd0fbdc5879b881d2a8b6cc613 544 SUPERFAMILY SSF51126 12 305 3.34E-24 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS14365 f77190f3410e6ee25a021b483f2e8c7a 241 Pfam PF05742 Transport and Golgi organisation 2 1 126 8.7E-14 T 20-04-2016 IPR008551 Transport and Golgi organisation protein 2 APS56_RS03445 263e0db6eb9042adca3e317a043da331 88 SUPERFAMILY SSF55008 1 66 2.75E-11 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS03445 263e0db6eb9042adca3e317a043da331 88 Gene3D G3DSA:3.30.70.100 1 64 1.9E-11 T 20-04-2016 APS56_RS03445 263e0db6eb9042adca3e317a043da331 88 Pfam PF00403 Heavy-metal-associated domain 5 63 1.3E-9 T 20-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APS56_RS04645 c4b5f187b6db11bd3db2aff82abae63c 310 Pfam PF16409 Domain of unknown function (DUF5017) 20 205 1.3E-40 T 20-04-2016 IPR032185 Domain of unknown function DUF5017 APS56_RS02445 4afc3d21bfbd3c92c9f4cb8718f54ac6 212 Gene3D G3DSA:2.50.20.10 27 201 3.0E-14 T 20-04-2016 APS56_RS02445 4afc3d21bfbd3c92c9f4cb8718f54ac6 212 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 37 199 3.1E-9 T 20-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APS56_RS02445 4afc3d21bfbd3c92c9f4cb8718f54ac6 212 SUPERFAMILY SSF89392 27 200 9.02E-13 T 20-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APS56_RS07690 fd709b83ea8be2b6c1ff11af1f9b45d9 1011 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 948 1010 7.5E-9 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS07690 fd709b83ea8be2b6c1ff11af1f9b45d9 1011 SUPERFAMILY SSF49899 87 252 8.55E-9 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS02740 6aa198a0583487711ed19bcaa1c7e4aa 352 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 39 242 2.0E-21 T 20-04-2016 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system APS56_RS05045 c28064fceec47c58cf9ea6b2dbe9905e 227 Pfam PF03724 META domain 122 224 1.8E-13 T 20-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ APS56_RS05045 c28064fceec47c58cf9ea6b2dbe9905e 227 Pfam PF14302 Domain of unknown function (DUF4377) 31 111 1.7E-18 T 20-04-2016 IPR025485 Domain of unknown function DUF4377 APS56_RS12670 2258617b9339a06bb4421e4c92fd27bb 667 Pfam PF16126 Domain of unknown function (DUF4838) 252 526 1.7E-21 T 20-04-2016 IPR032287 Protein of unknown function DUF4838 APS56_RS12725 c5ad7167052b10636306e652febe65e3 218 Gene3D G3DSA:2.60.40.1190 13 212 8.3E-18 T 20-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 APS56_RS12725 c5ad7167052b10636306e652febe65e3 218 Pfam PF06452 Carbohydrate family 9 binding domain-like 18 213 3.3E-14 T 20-04-2016 IPR010502 Carbohydrate-binding domain, family 9 GO:0004553|GO:0016052|GO:0030246 MetaCyc: PWY-6784 APS56_RS12725 c5ad7167052b10636306e652febe65e3 218 SUPERFAMILY SSF49344 13 212 3.45E-16 T 20-04-2016 APS56_RS11465 91ece9cea75fc1a557eeb89269fa1b32 290 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 98 281 4.1E-10 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS11465 91ece9cea75fc1a557eeb89269fa1b32 290 SUPERFAMILY SSF56219 93 286 3.8E-17 T 20-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APS56_RS14755 c9ae5f909d77ad598ebb10a9b5c7b52e 263 Pfam PF10099 Anti-sigma-K factor rskA 62 248 1.1E-13 T 20-04-2016 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 APS56_RS10475 24c3b22e5f10bc7b051b7d92e98c5362 247 PANTHER PTHR37468 1 234 6.6E-17 T 20-04-2016 APS56_RS10475 24c3b22e5f10bc7b051b7d92e98c5362 247 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 224 1.3E-24 T 20-04-2016 APS56_RS14160 423c4a94670ce8a8b7c919046f1a0faa 546 Pfam PF08811 Protein of unknown function (DUF1800) 18 505 1.6E-63 T 20-04-2016 IPR014917 Protein of unknown function DUF1800 APS56_RS10780 4bc709286532bd568a340a8cac9332a0 389 Pfam PF04932 O-Antigen ligase 188 329 1.1E-9 T 20-04-2016 IPR007016 O-antigen ligase-related APS56_RS04500 de60ef1d8b8e98e03c849846c8601ffd 235 Pfam PF13852 Protein of unknown function (DUF4197) 35 232 3.7E-78 T 20-04-2016 IPR025245 Protein of unknown function DUF4197 APS56_RS13850 57047f81f95ce9be5c039acf5bb7dc47 312 Pfam PF14100 Methane oxygenase PmoA 39 305 2.1E-44 T 20-04-2016 IPR029475 Methane oxygenase PmoA APS56_RS12140 9b6771e2750a67de881ca8eeb28e1a91 260 Pfam PF11306 Protein of unknown function (DUF3108) 16 246 4.1E-64 T 20-04-2016 IPR021457 Protein of unknown function DUF3108 APS56_RS13380 1ed1e363a1b34a4f23a81c28b70052e1 316 Pfam PF13536 Putative multidrug resistance efflux transporter 43 302 7.2E-105 T 20-04-2016 IPR032713 Putative multidrug resistance efflux transporter APS56_RS14790 79bf7241a0165b6042aa23207007acb5 93 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 28 93 2.9E-12 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS02485 c213a63061c5a27e6c24289407b27ab6 182 SUPERFAMILY SSF55961 28 180 5.07E-10 T 20-04-2016 APS56_RS12230 401dd4ac82faa106515f87b7230a1123 265 PANTHER PTHR30622 1 264 5.7E-86 T 20-04-2016 APS56_RS12230 401dd4ac82faa106515f87b7230a1123 265 Pfam PF02673 Bacitracin resistance protein BacA 6 256 3.2E-73 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APS56_RS12230 401dd4ac82faa106515f87b7230a1123 265 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 254 7.0E-66 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APS56_RS12230 401dd4ac82faa106515f87b7230a1123 265 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 261 16.944 T 20-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APS56_RS14620 5b4764687086c24b6e1a500fcc4081b7 457 Pfam PF16173 Domain of unknown function (DUF4874) 50 207 4.3E-49 T 20-04-2016 IPR032379 Domain of unknown function DUF4874 APS56_RS14620 5b4764687086c24b6e1a500fcc4081b7 457 Pfam PF16116 Domain of unknown function (DUF4832) 233 437 2.0E-54 T 20-04-2016 IPR032267 Domain of unknown function DUF4832 APS56_RS10250 fa514882c5c275e85229ea9ca0c775d7 143 SUPERFAMILY SSF158682 14 122 1.2E-17 T 20-04-2016 IPR029024 TerB-like APS56_RS10250 fa514882c5c275e85229ea9ca0c775d7 143 Gene3D G3DSA:1.10.3680.10 22 119 1.0E-9 T 20-04-2016 IPR029024 TerB-like APS56_RS02680 55dd54946cf9c853f9e5b75d604990ac 402 PANTHER PTHR23505 4 400 4.2E-140 T 20-04-2016 APS56_RS02680 55dd54946cf9c853f9e5b75d604990ac 402 Gene3D G3DSA:1.20.1250.20 223 399 5.1E-21 T 20-04-2016 APS56_RS02680 55dd54946cf9c853f9e5b75d604990ac 402 Gene3D G3DSA:1.20.1250.20 19 188 9.0E-22 T 20-04-2016 APS56_RS02680 55dd54946cf9c853f9e5b75d604990ac 402 PANTHER PTHR23505:SF8 4 400 4.2E-140 T 20-04-2016 APS56_RS02680 55dd54946cf9c853f9e5b75d604990ac 402 SUPERFAMILY SSF103473 11 400 1.05E-57 T 20-04-2016 IPR020846 Major facilitator superfamily domain APS56_RS02680 55dd54946cf9c853f9e5b75d604990ac 402 Pfam PF07690 Major Facilitator Superfamily 23 244 1.9E-24 T 20-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APS56_RS07705 8db53a7476e69054a724ee6b906793c6 148 Pfam PF09685 Domain of unknown function (DUF4870) 6 147 1.4E-36 T 20-04-2016 IPR019109 Protein of unknown function DUF4870 APS56_RS12340 dcbb59048910e65d6b50aaf2be233d1e 178 Pfam PF14129 Domain of unknown function (DUF4296) 27 106 4.0E-18 T 20-04-2016 IPR025381 Domain of unknown function DUF4296 APS56_RS09950 64bcebf1ad9f0f658ade68e37a05d733 292 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 219 292 4.5E-13 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS07630 3f9d83f877fe25f155e1616591f454d2 327 PANTHER PTHR35337 1 311 2.3E-42 T 20-04-2016 APS56_RS07630 3f9d83f877fe25f155e1616591f454d2 327 Pfam PF01944 Stage II sporulation protein M 104 281 2.2E-30 T 20-04-2016 IPR002798 Stage II sporulation protein M-like APS56_RS01160 952adf6dac3d12edf7133ce456630f8d 344 Pfam PF14280 Domain of unknown function (DUF4365) 7 138 1.3E-25 T 20-04-2016 IPR025375 Domain of unknown function DUF4365 APS56_RS07020 3972d2e553b132ce92a45c2fd5dcbeeb 191 Gene3D G3DSA:1.20.58.430 24 150 7.4E-4 T 20-04-2016 IPR023220 Type IV secretion system, VirB5-domain APS56_RS10520 41dd0c5f61ab4f2f63f85839db550ca0 237 Gene3D G3DSA:3.30.420.10 60 222 2.8E-22 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS10520 41dd0c5f61ab4f2f63f85839db550ca0 237 Gene3D G3DSA:3.30.420.10 9 26 2.8E-22 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS10520 41dd0c5f61ab4f2f63f85839db550ca0 237 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 62 223 5.6E-15 T 20-04-2016 IPR019288 Predicted 3'-5' exonuclease, PolB-like APS56_RS10520 41dd0c5f61ab4f2f63f85839db550ca0 237 SUPERFAMILY SSF53098 8 224 2.6E-32 T 20-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APS56_RS02240 1233b78b7cdc35ab39dfc6d8a33c0b53 321 SUPERFAMILY SSF56059 98 297 5.2E-20 T 20-04-2016 APS56_RS02240 1233b78b7cdc35ab39dfc6d8a33c0b53 321 Gene3D G3DSA:3.40.50.20 1 115 9.9E-37 T 20-04-2016 IPR016185 Pre-ATP-grasp domain APS56_RS02240 1233b78b7cdc35ab39dfc6d8a33c0b53 321 Gene3D G3DSA:3.30.1490.20 116 182 6.7E-11 T 20-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APS56_RS02240 1233b78b7cdc35ab39dfc6d8a33c0b53 321 Gene3D G3DSA:3.30.470.20 187 304 6.0E-26 T 20-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APS56_RS15350 e5b936d917de2515493d029b74f86cb8 185 Pfam PF14060 Domain of unknown function (DUF4252) 6 170 3.9E-41 T 20-04-2016 IPR025348 Protein of unknown function DUF4252 APS56_RS13135 78df458433d6d0223c5fbee28d2138d2 229 SUPERFAMILY SSF56925 37 223 6.59E-5 T 20-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APS56_RS13525 45b83805f53b79e03cfbe33cc52f919c 811 SUPERFAMILY SSF50998 503 693 6.28E-7 T 20-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APS56_RS13525 45b83805f53b79e03cfbe33cc52f919c 811 Gene3D G3DSA:2.140.10.10 509 693 3.8E-6 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APS56_RS13525 45b83805f53b79e03cfbe33cc52f919c 811 Gene3D G3DSA:2.140.10.10 172 194 3.8E-6 T 20-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APS56_RS14865 74b6f95e668fd20cef29635db8a76ec2 252 PANTHER PTHR30283:SF3 2 252 2.5E-100 T 20-04-2016 APS56_RS14865 74b6f95e668fd20cef29635db8a76ec2 252 PANTHER PTHR30283 2 252 2.5E-100 T 20-04-2016 APS56_RS14865 74b6f95e668fd20cef29635db8a76ec2 252 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 252 32.933 T 20-04-2016 IPR005583 Peroxide stress protein YaaA APS56_RS14865 74b6f95e668fd20cef29635db8a76ec2 252 Pfam PF03883 Protein of unknown function (DUF328) 1 241 5.7E-86 T 20-04-2016 IPR005583 Peroxide stress protein YaaA APS56_RS06235 356afb630b0f1078f71a9abc382f2ed4 507 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 300 406 2.7E-24 T 20-04-2016 IPR005046 Protein of unknown function DUF285 APS56_RS10710 c274b3089365edd822e85b6ea0b394b1 201 Pfam PF14063 Protein of unknown function (DUF4254) 38 181 2.3E-66 T 20-04-2016 IPR025350 Protein of unknown function DUF4254 APS56_RS02550 5dc513023e0bf36b37821d5ad6475c67 151 Pfam PF07606 Protein of unknown function (DUF1569) 14 149 4.4E-6 T 20-04-2016 IPR011463 Protein of unknown function DUF1569 APS56_RS09960 d68a57ef6f9dbbb20299a7829f942f9f 211 Pfam PF16389 Domain of unknown function 1 200 8.2E-51 T 20-04-2016 APS56_RS00660 e5f1d230b382de9a5fa4a51d0415b270 233 Pfam PF09568 MjaI restriction endonuclease 33 195 1.8E-6 T 20-04-2016 IPR019068 Restriction endonuclease, type II, MjaI GO:0003677|GO:0009036|GO:0009307 APS56_RS09915 c04175a705b301d7be4be7e6c2607e97 505 SUPERFAMILY SSF51126 230 453 9.74E-11 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS09915 c04175a705b301d7be4be7e6c2607e97 505 SUPERFAMILY SSF51126 4 287 1.33E-21 T 20-04-2016 IPR011050 Pectin lyase fold/virulence factor APS56_RS12400 33cca33ff230112a49aa07a106206870 113 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 41 112 1.1E-15 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS11860 7c21e575a7b11a5852cf276c0c8c2d3c 308 Pfam PF11276 Protein of unknown function (DUF3078) 69 166 1.4E-16 T 20-04-2016 IPR021428 Protein of unknown function DUF3078 APS56_RS00555 cad60ad3e3b7d6b42cae80a8ec5b82ef 390 Pfam PF16153 Domain of unknown function (DUF4861) 30 387 6.7E-89 T 20-04-2016 IPR032342 Protein of unknown function DUF4861 APS56_RS12505 b864789b5c35aefec59fbfa05cb122b7 264 Pfam PF08907 Domain of unknown function (DUF1853) 40 245 4.2E-44 T 20-04-2016 IPR015003 Protein of unknown function DUF1853 APS56_RS13810 e4db628bbe61e079c488731712b130ee 241 SUPERFAMILY SSF49464 8 88 6.08E-5 T 20-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APS56_RS07415 88512d2cf3a7183ab5469402531c69f6 85 Pfam PF09834 Predicted membrane protein (DUF2061) 28 79 1.1E-24 T 20-04-2016 IPR018638 Domain of unknown function DUF2061, membrane APS56_RS07075 bb7a0358c1d75cd509405add70909eac 126 Pfam PF06390 Neuroendocrine-specific golgi protein P55 (NESP55) 21 122 1.8E-6 T 20-04-2016 IPR009434 Neuroendocrine secretory protein 55 GO:0071107 APS56_RS08300 8a9eddbb3a247d9aa14cc57e97e4cfcc 369 Pfam PF01594 Domain of unknown function DUF20 14 333 4.8E-50 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APS56_RS08300 8a9eddbb3a247d9aa14cc57e97e4cfcc 369 PANTHER PTHR21716 17 346 2.0E-54 T 20-04-2016 IPR002549 Transmembrane protein TqsA-like APS56_RS03350 c8fb9552e314c8395862701ca427c956 299 Gene3D G3DSA:4.10.1080.10 131 228 9.3E-7 T 20-04-2016 IPR028974 TSP type-3 repeat GO:0005509 APS56_RS11535 7669332877e820c1dc1fc9c909e03adb 590 Pfam PF13584 Oxygen tolerance 14 500 1.3E-146 T 20-04-2016 IPR025738 Aerotolerance-related protein BatD APS56_RS05315 3212a3a7c90697a240097379a28d7312 400 SUPERFAMILY SSF53756 26 286 2.72E-9 T 20-04-2016 APS56_RS05920 55d6383219d61b96f90294299caa042f 250 Gene3D G3DSA:2.60.120.200 42 248 6.7E-9 T 20-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APS56_RS01405 fc2a089a750917dd6940afe72232fdc5 190 Pfam PF08800 VirE N-terminal domain 68 182 5.6E-24 T 20-04-2016 IPR014907 Virulence-protein E, N-terminal APS56_RS07895 368e93e1298835eadd3921c4e047261c 148 Pfam PF05751 FixH 2 145 2.6E-20 T 20-04-2016 IPR008620 Nitrogen fixation protein FixH APS56_RS13395 5bf9d31e3d55b310c7a69fd0e000ffc7 111 TIGRFAM TIGR03515 GldC: gliding motility-associated protein GldC 7 110 1.1E-42 T 20-04-2016 IPR019854 Gliding motility-associated protein, GldC APS56_RS07040 95b1f0d940e96b8c7e12808036b60f46 277 Pfam PF13595 Domain of unknown function (DUF4138) 28 270 1.4E-33 T 20-04-2016 IPR022298 Conjugative transposon, TraN APS56_RS00685 40d532ca3245463899d19ab57d427d2a 212 Pfam PF06078 Bacterial protein of unknown function (DUF937) 6 139 3.0E-36 T 20-04-2016 IPR009282 Protein of unknown function DUF937 APS56_RS04685 f236071061a4db671142f595c96566e3 318 Pfam PF08011 PD-(D/E)XK nuclease superfamily 222 312 7.7E-18 T 20-04-2016 IPR012547 PD-(D/E)XK nuclease superfamily 9 APS56_RS16285 56b69a67f8913024906ca85931e9a593 302 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 81 153 1.7E-14 T 20-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein APS56_RS08055 0b3a08f75a31812616b38f88c125c164 125 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 13 89 6.1E-10 T 20-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 APS56_RS09660 947bdcbc7fbc9c436a3c36c6ddc8c8d1 109 Gene3D G3DSA:3.20.20.80 39 109 2.2E-4 T 20-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APS56_RS01685 fa79f7c853fce5e9b699546f8065bead 168 Pfam PF11322 Protein of unknown function (DUF3124) 47 167 1.2E-46 T 20-04-2016 IPR021471 Protein of unknown function DUF3124 APS56_RS07940 41a644847ccd162a6224537ff2868ab0 444 Pfam PF00474 Sodium:solute symporter family 49 193 3.2E-5 T 20-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APS56_RS13400 4168d99e54c7ee60ecd56055295d8071 318 TIGRFAM TIGR03514 GldB_lipo: gliding motility-associated lipoprotein GldB 8 316 6.0E-104 T 20-04-2016 IPR019853 Gliding motility-associated lipoprotein, GldB APS56_RS07565 39fdb9dcd9602d36108468f7690e2707 134 Pfam PF12650 Domain of unknown function (DUF3784) 9 99 8.7E-15 T 20-04-2016 IPR017259 Uncharacterised conserved protein UCP037672 APS56_RS14255 34d724ecf5fd162186168a1bbe7f63a7 95 Pfam PF02416 mttA/Hcf106 family 10 61 5.5E-16 T 20-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APS56_RS14255 34d724ecf5fd162186168a1bbe7f63a7 95 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 7 82 16.156 T 20-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APS56_RS06850 bd9ac19ee7ad82dc7d5aa7e64154d548 151 Pfam PF07606 Protein of unknown function (DUF1569) 14 149 9.7E-6 T 20-04-2016 IPR011463 Protein of unknown function DUF1569 APS56_RS01705 45535656ec19d26c56cbaeca9fdf5031 1287 Pfam PF13585 C-terminal domain of CHU protein family 1183 1272 9.6E-20 T 20-04-2016 APS56_RS06745 d2c297e8ec8664781b925313c753a440 413 Gene3D G3DSA:2.40.160.60 40 215 3.4E-6 T 20-04-2016 APS56_RS06745 d2c297e8ec8664781b925313c753a440 413 Gene3D G3DSA:2.40.160.60 332 391 8.4E-6 T 20-04-2016 APS56_RS00590 f7b0645865e1ec9cd3eff7afc7dfac42 580 Gene3D G3DSA:1.25.40.10 436 525 3.9E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS00590 f7b0645865e1ec9cd3eff7afc7dfac42 580 Gene3D G3DSA:1.25.40.10 196 320 3.9E-38 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS00590 f7b0645865e1ec9cd3eff7afc7dfac42 580 SUPERFAMILY SSF48452 395 580 8.22E-73 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS00590 f7b0645865e1ec9cd3eff7afc7dfac42 580 SUPERFAMILY SSF48452 19 342 8.22E-73 T 20-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APS56_RS00590 f7b0645865e1ec9cd3eff7afc7dfac42 580 Pfam PF07980 SusD family 307 578 2.5E-14 T 20-04-2016 IPR012944 RagB/SusD domain APS56_RS15740 b742f7a7462bc0b08fe54f14b7a53a69 510 Pfam PF16407 PKD-like family 20 184 4.5E-11 T 20-04-2016 IPR032183 PKD-like family APS56_RS12800 6fb031ad20558feb393700bca530fff1 116 Pfam PF14079 Domain of unknown function (DUF4260) 2 113 4.5E-45 T 20-04-2016 IPR025356 Protein of unknown function DUF4260 APS56_RS14205 ef790936bb5a27a4ff33c45238a0f829 180 Pfam PF11138 Protein of unknown function (DUF2911) 46 178 4.0E-42 T 20-04-2016 IPR021314 Protein of unknown function DUF2911 APS56_RS10035 1f23004b4ff3df8f388511b137dd4090 149 Pfam PF11355 Protein of unknown function (DUF3157) 4 56 7.6E-7 T 20-04-2016 IPR021501 Protein of unknown function DUF3157 APS56_RS12865 e4ed7a5f5b58a4248cc12a4c4aeebe3e 134 Pfam PF03203 MerC mercury resistance protein 9 119 4.6E-14 T 20-04-2016 IPR004891 MerC mercury resistance protein APS56_RS16200 4493696c1ca5a4bed7b4abcb91aee45c 335 Pfam PF13557 Putative MetA-pathway of phenol degradation 29 285 3.3E-30 T 20-04-2016 IPR025737 MetA-pathway of phenol degradation, putative APS56_RS11595 f846ba291c3cef95ee8da5f78e944d7c 178 Pfam PF02674 Colicin V production protein 4 150 6.3E-29 T 20-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APS56_RS08575 f8370e7bb9165f8e6b39a08145be30ba 301 SUPERFAMILY SSF54211 4 175 7.59E-12 T 20-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APS56_RS08575 f8370e7bb9165f8e6b39a08145be30ba 301 Gene3D G3DSA:3.30.230.10 4 127 2.4E-8 T 20-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APS56_RS15070 23b43da0b7058c07e6986fb7ec0dadb6 347 TIGRFAM TIGR04183 Por_Secre_tail: Por secretion system C-terminal sorting domain 276 347 4.0E-17 T 20-04-2016 IPR026444 Secretion system C-terminal sorting domain APS56_RS09405 66f7e29faa7a29c54ab210f8ed25f35d 77 Pfam PF11399 Protein of unknown function (DUF3192) 2 46 1.7E-5 T 20-04-2016 IPR021534 Protein of unknown function DUF3192 APS56_RS10985 afc03d5dcbca0751f574ec6813669b2a 224 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 28 207 2.7E-34 T 20-04-2016 IPR021255 Putative auto-transporter adhesin, head GIN domain APS56_RS07185 1d3b9692f0254033d87c95586ad9eb20 214 TIGRFAM TIGR03513 GldL_gliding: gliding motility-associated protein GldL 8 211 1.3E-65 T 20-04-2016 IPR019852 Gliding motility-associated protein, GldL APS56_RS06955 7cf2e158dd4cb46065b98631a00f6787 279 Pfam PF09357 RteC protein 62 278 1.4E-66 T 20-04-2016 IPR018534 Tetracycline regulation of excision, RteC APS56_RS03200 50ce812c87c46be98039c8d2541a12a8 129 Pfam PF15071 Transmembrane family 220, helix 21 122 5.2E-16 T 20-04-2016 IPR029377 TMEM220 protein APS56_RS08330 3b20ce23c3edd466a18021dc747c4251 91 Pfam PF12732 YtxH-like protein 8 81 4.5E-18 T 20-04-2016 IPR024623 Uncharacterised protein family YtxH APS56_RS05650 92b1d178e0dcaea144a38b0263c65215 131 Pfam PF11026 Protein of unknown function (DUF2721) 7 122 3.3E-34 T 20-04-2016 IPR021279 Protein of unknown function DUF2721 APS56_RS12535 5ff40f23287366300839831709296530 133 Pfam PF09537 Domain of unknown function (DUF2383) 2 99 4.4E-13 T 20-04-2016 IPR019052 Domain of unknown function DUF2383 APS56_RS16025 ef82eff05ea1749916eaaac5ddb025f1 72 Pfam PF08906 Domain of unknown function (DUF1851) 2 53 2.5E-7 T 20-04-2016 IPR015002 Domain of unknown function DUF1851