locus-tag class description PCI15_RS00005 PF00308 Bacterial dnaA protein PCI15_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix PCI15_RS00005 PF11638 DnaA N-terminal domain PCI15_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain PCI15_RS00010 PF02767 DNA polymerase III beta subunit, central domain PCI15_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain PCI15_RS00015 PF02463 RecF/RecN/SMC N terminal domain PCI15_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS00020 PF18053 DNA gyrase B subunit insert domain PCI15_RS00020 PF01751 Toprim domain PCI15_RS00020 PF00204 DNA gyrase B PCI15_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus PCI15_RS00035 PF06965 Na+/H+ antiporter 1 PCI15_RS00040 PF03070 TENA/THI-4/PQQC family PCI15_RS00055 PF00266 Aminotransferase class-V PCI15_RS00060 PF01037 Lrp/AsnC ligand binding domain PCI15_RS00060 PF13404 AsnC-type helix-turn-helix domain PCI15_RS00065 PF00999 Sodium/hydrogen exchanger family PCI15_RS00065 PF02254 TrkA-N domain PCI15_RS00070 PF00364 Biotin-requiring enzyme PCI15_RS00070 PF00561 alpha/beta hydrolase fold PCI15_RS00075 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS00085 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS00090 PF03466 LysR substrate binding domain PCI15_RS00090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00095 PF03466 LysR substrate binding domain PCI15_RS00100 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS00105 PF07729 FCD domain PCI15_RS00105 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS00110 PF00672 HAMP domain PCI15_RS00110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS00110 PF02743 Cache domain PCI15_RS00120 PF03466 LysR substrate binding domain PCI15_RS00120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00125 PF09278 MerR, DNA binding PCI15_RS00125 PF00376 MerR family regulatory protein PCI15_RS00135 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PCI15_RS00135 PF06155 Protein of unknown function (DUF971) PCI15_RS00150 PF01037 Lrp/AsnC ligand binding domain PCI15_RS00165 PF00563 EAL domain PCI15_RS00165 PF01590 GAF domain PCI15_RS00165 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS00165 PF00360 Phytochrome region PCI15_RS00170 PF05368 NmrA-like family PCI15_RS00175 PF03466 LysR substrate binding domain PCI15_RS00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00185 PF01925 Sulfite exporter TauE/SafE PCI15_RS00200 PF05746 DALR anticodon binding domain PCI15_RS00200 PF02092 Glycyl-tRNA synthetase beta subunit PCI15_RS00205 PF02091 Glycyl-tRNA synthetase alpha subunit PCI15_RS00220 PF02386 Cation transport protein PCI15_RS00225 PF02080 TrkA-C domain PCI15_RS00225 PF02254 TrkA-N domain PCI15_RS00230 PF01189 16S rRNA methyltransferase RsmB/F PCI15_RS00230 PF01029 NusB family PCI15_RS00235 PF02911 Formyl transferase, C-terminal domain PCI15_RS00235 PF00551 Formyl transferase PCI15_RS00240 PF01327 Polypeptide deformylase PCI15_RS00250 PF17782 DprA winged helix domain PCI15_RS00250 PF02481 DNA recombination-mediator protein A PCI15_RS00255 PF01300 Telomere recombination PCI15_RS00260 PF01218 Coproporphyrinogen III oxidase PCI15_RS00265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PCI15_RS00265 PF01488 Shikimate / quinate 5-dehydrogenase PCI15_RS00265 PF08501 Shikimate dehydrogenase substrate binding domain PCI15_RS00270 PF05362 Lon protease (S16) C-terminal proteolytic domain PCI15_RS00270 PF13654 AAA domain PCI15_RS00275 PF02608 ABC transporter substrate-binding protein PnrA-like PCI15_RS00280 PF00005 ABC transporter PCI15_RS00290 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS00295 PF00294 pfkB family carbohydrate kinase PCI15_RS00300 PF01156 Inosine-uridine preferring nucleoside hydrolase PCI15_RS00310 PF01435 Peptidase family M48 PCI15_RS00315 PF07690 Major Facilitator Superfamily PCI15_RS00320 PF00005 ABC transporter PCI15_RS00320 PF00664 ABC transporter transmembrane region PCI15_RS00330 PF03466 LysR substrate binding domain PCI15_RS00330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00350 PF17191 RecG wedge domain PCI15_RS00350 PF00270 DEAD/DEAH box helicase PCI15_RS00350 PF00271 Helicase conserved C-terminal domain PCI15_RS00355 PF03466 LysR substrate binding domain PCI15_RS00355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00365 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS00370 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS00375 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS00380 PF00005 ABC transporter PCI15_RS00385 PF02503 Polyphosphate kinase middle domain PCI15_RS00385 PF13090 Polyphosphate kinase C-terminal domain 2 PCI15_RS00385 PF17941 Polyphosphate kinase C-terminal domain 1 PCI15_RS00385 PF13089 Polyphosphate kinase N-terminal domain PCI15_RS00390 PF00490 Delta-aminolevulinic acid dehydratase PCI15_RS00400 PF00977 Histidine biosynthesis protein PCI15_RS00405 PF00117 Glutamine amidotransferase class-I PCI15_RS00410 PF00475 Imidazoleglycerol-phosphate dehydratase PCI15_RS00420 PF10576 Iron-sulfur binding domain of endonuclease III PCI15_RS00420 PF14815 NUDIX domain PCI15_RS00420 PF00730 HhH-GPD superfamily base excision DNA repair protein PCI15_RS00420 PF00633 Helix-hairpin-helix motif PCI15_RS00425 PF04362 Bacterial Fe(2+) trafficking PCI15_RS00435 PF02082 Transcriptional regulator PCI15_RS00440 PF07732 Multicopper oxidase PCI15_RS00445 PF07732 Multicopper oxidase PCI15_RS00460 PF13533 Biotin-lipoyl like PCI15_RS00465 PF00873 AcrB/AcrD/AcrF family PCI15_RS00470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00470 PF03466 LysR substrate binding domain PCI15_RS00485 PF00043 Glutathione S-transferase, C-terminal domain PCI15_RS00485 PF02798 Glutathione S-transferase, N-terminal domain PCI15_RS00490 PF03466 LysR substrate binding domain PCI15_RS00490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00500 PF16868 NMT1-like family PCI15_RS00505 PF01627 Hpt domain PCI15_RS00505 PF00072 Response regulator receiver domain PCI15_RS00505 PF17149 Periplasmic sensor domain found in signal transduction proteins PCI15_RS00505 PF00672 HAMP domain PCI15_RS00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS00505 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS00530 PF02661 Fic/DOC family PCI15_RS00530 PF13784 Fic/DOC family N-terminal PCI15_RS00535 PF11849 Domain of unknown function (DUF3369) PCI15_RS00540 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PCI15_RS00540 PF12833 Helix-turn-helix domain PCI15_RS00550 PF00672 HAMP domain PCI15_RS00550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS00550 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS00550 PF00072 Response regulator receiver domain PCI15_RS00550 PF01627 Hpt domain PCI15_RS00550 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PCI15_RS00585 PF00271 Helicase conserved C-terminal domain PCI15_RS00585 PF18337 RapA N-terminal Tudor like domain PCI15_RS00585 PF18339 RapA N-terminal Tudor like domain 1 PCI15_RS00585 PF00176 SNF2 family N-terminal domain PCI15_RS00585 PF12137 RNA polymerase recycling family C-terminal PCI15_RS00590 PF08340 Domain of unknown function (DUF1732) PCI15_RS00590 PF03755 YicC-like family, N-terminal region PCI15_RS00595 PF01138 3' exoribonuclease family, domain 1 PCI15_RS00595 PF03725 3' exoribonuclease family, domain 2 PCI15_RS00600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family PCI15_RS00615 PF00012 Hsp70 protein PCI15_RS00625 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS00625 PF00155 Aminotransferase class I and II PCI15_RS00630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PCI15_RS00640 PF03466 LysR substrate binding domain PCI15_RS00640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00645 PF03466 LysR substrate binding domain PCI15_RS00655 PF01266 FAD dependent oxidoreductase PCI15_RS00655 PF16350 FAD dependent oxidoreductase central domain PCI15_RS00655 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS00655 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS00665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00665 PF03466 LysR substrate binding domain PCI15_RS00670 PF01266 FAD dependent oxidoreductase PCI15_RS00670 PF16350 FAD dependent oxidoreductase central domain PCI15_RS00670 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS00670 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS00675 PF01966 HD domain PCI15_RS00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS00680 PF03466 LysR substrate binding domain PCI15_RS00690 PF00355 Rieske [2Fe-2S] domain PCI15_RS00690 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS00695 PF00005 ABC transporter PCI15_RS00700 PF02423 Ornithine cyclodeaminase/mu-crystallin family PCI15_RS00705 PF01266 FAD dependent oxidoreductase PCI15_RS00715 PF00491 Arginase family PCI15_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS00725 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS00730 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS00740 PF01810 LysE type translocator PCI15_RS00750 PF01810 LysE type translocator PCI15_RS00775 PF16868 NMT1-like family PCI15_RS00800 PF01380 SIS domain PCI15_RS00800 PF01418 Helix-turn-helix domain, rpiR family PCI15_RS00800 PF02685 Glucokinase PCI15_RS00805 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PCI15_RS00805 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PCI15_RS00810 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS00815 PF00924 Mechanosensitive ion channel PCI15_RS00815 PF12794 Mechanosensitive ion channel inner membrane domain 1 PCI15_RS00815 PF12795 Mechanosensitive ion channel porin domain PCI15_RS00825 PF03641 Possible lysine decarboxylase PCI15_RS00840 PF00005 ABC transporter PCI15_RS00845 PF01032 FecCD transport family PCI15_RS00850 PF01497 Periplasmic binding protein PCI15_RS00855 PF00593 TonB dependent receptor PCI15_RS00855 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS00865 PF03372 Endonuclease/Exonuclease/phosphatase family PCI15_RS00870 PF00156 Phosphoribosyl transferase domain PCI15_RS00885 PF05231 MASE1 PCI15_RS00885 PF07730 Histidine kinase PCI15_RS00885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS00890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PCI15_RS00890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PCI15_RS00900 PF07690 Major Facilitator Superfamily PCI15_RS00910 PF04717 Type VI secretion system, phage-baseplate injector PCI15_RS00940 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath PCI15_RS00965 PF10431 C-terminal, D2-small domain, of ClpB protein PCI15_RS00965 PF17871 AAA lid domain PCI15_RS00965 PF00004 ATPase family associated with various cellular activities (AAA) PCI15_RS00965 PF07724 AAA domain (Cdc48 subfamily) PCI15_RS00985 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE PCI15_RS01000 PF01011 PQQ enzyme repeat PCI15_RS01000 PF13360 PQQ-like domain PCI15_RS01000 PF13570 PQQ-like domain PCI15_RS01000 PF00069 Protein kinase domain PCI15_RS01020 PF01297 Zinc-uptake complex component A periplasmic PCI15_RS01025 PF01475 Ferric uptake regulator family PCI15_RS01030 PF00005 ABC transporter PCI15_RS01035 PF00950 ABC 3 transport family PCI15_RS01040 PF00892 EamA-like transporter family PCI15_RS01050 PF02378 Phosphotransferase system, EIIC PCI15_RS01055 PF00485 Phosphoribulokinase / Uridine kinase family PCI15_RS01060 PF11974 Bacterial alpha-2-macroglobulin MG3 domain PCI15_RS01060 PF07678 A-macroglobulin TED domain PCI15_RS01060 PF00207 Alpha-2-macroglobulin family PCI15_RS01060 PF07703 Alpha-2-macroglobulin bait region domain PCI15_RS01060 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain PCI15_RS01060 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain PCI15_RS01060 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain PCI15_RS01060 PF17962 Bacterial macroglobulin domain 6 PCI15_RS01060 PF01835 MG2 domain PCI15_RS01065 PF00905 Penicillin binding protein transpeptidase domain PCI15_RS01065 PF00912 Transglycosylase PCI15_RS01065 PF06832 Penicillin-Binding Protein C-terminus Family PCI15_RS01070 PF02311 AraC-like ligand binding domain PCI15_RS01070 PF12833 Helix-turn-helix domain PCI15_RS01085 PF00672 HAMP domain PCI15_RS01085 PF17200 Single Cache domain 2 PCI15_RS01085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS01095 PF00072 Response regulator receiver domain PCI15_RS01095 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS01105 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS01105 PF00672 HAMP domain PCI15_RS01105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS01120 PF03352 Methyladenine glycosylase PCI15_RS01130 PF01432 Peptidase family M3 PCI15_RS01135 PF00132 Bacterial transferase hexapeptide (six repeats) PCI15_RS01145 PF00072 Response regulator receiver domain PCI15_RS01145 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS01150 PF00672 HAMP domain PCI15_RS01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS01150 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS01155 PF06123 Inner membrane protein CreD PCI15_RS01165 PF01435 Peptidase family M48 PCI15_RS01200 PF00005 ABC transporter PCI15_RS01205 PF13472 GDSL-like Lipase/Acylhydrolase family PCI15_RS01215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01215 PF03466 LysR substrate binding domain PCI15_RS01220 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PCI15_RS01220 PF01926 50S ribosome-binding GTPase PCI15_RS01245 PF00462 Glutaredoxin PCI15_RS01245 PF08534 Redoxin PCI15_RS01250 PF03313 Serine dehydratase alpha chain PCI15_RS01250 PF03315 Serine dehydratase beta chain PCI15_RS01255 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS01255 PF00107 Zinc-binding dehydrogenase PCI15_RS01260 PF00756 Putative esterase PCI15_RS01270 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS01275 PF00005 ABC transporter PCI15_RS01275 PF00571 CBS domain PCI15_RS01280 PF00491 Arginase family PCI15_RS01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01285 PF03466 LysR substrate binding domain PCI15_RS01290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS01290 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS01290 PF16750 Sensor domain of 2-component histidine kinase PCI15_RS01290 PF00672 HAMP domain PCI15_RS01295 PF00072 Response regulator receiver domain PCI15_RS01295 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS01310 PF03466 LysR substrate binding domain PCI15_RS01310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS01320 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS01325 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS01335 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS01335 PF04324 BFD-like [2Fe-2S] binding domain PCI15_RS01340 PF01266 FAD dependent oxidoreductase PCI15_RS01345 PF01042 Endoribonuclease L-PSP PCI15_RS01355 PF00209 Sodium:neurotransmitter symporter family PCI15_RS01360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01360 PF03466 LysR substrate binding domain PCI15_RS01375 PF02615 Malate/L-lactate dehydrogenase PCI15_RS01380 PF00563 EAL domain PCI15_RS01380 PF00360 Phytochrome region PCI15_RS01380 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS01380 PF01590 GAF domain PCI15_RS01385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PCI15_RS01385 PF18267 Rubredoxin NAD+ reductase C-terminal domain PCI15_RS01385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PCI15_RS01385 PF04324 BFD-like [2Fe-2S] binding domain PCI15_RS01385 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS01410 PF00072 Response regulator receiver domain PCI15_RS01410 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS01415 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS01415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS01415 PF16750 Sensor domain of 2-component histidine kinase PCI15_RS01415 PF00672 HAMP domain PCI15_RS01440 PF03466 LysR substrate binding domain PCI15_RS01440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01460 PF00464 Serine hydroxymethyltransferase PCI15_RS01465 PF01266 FAD dependent oxidoreductase PCI15_RS01475 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS01475 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS01475 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS01475 PF17806 Sarcosine oxidase A3 domain PCI15_RS01485 PF00672 HAMP domain PCI15_RS01485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS01495 PF00293 NUDIX domain PCI15_RS01500 PF01810 LysE type translocator PCI15_RS01510 PF03466 LysR substrate binding domain PCI15_RS01510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01515 PF12729 Four helix bundle sensory module for signal transduction PCI15_RS01515 PF00672 HAMP domain PCI15_RS01515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS01520 PF00664 ABC transporter transmembrane region PCI15_RS01520 PF00005 ABC transporter PCI15_RS01520 PF03412 Peptidase C39 family PCI15_RS01525 PF00672 HAMP domain PCI15_RS01525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS01525 PF12729 Four helix bundle sensory module for signal transduction PCI15_RS01530 PF03466 LysR substrate binding domain PCI15_RS01530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01535 PF06253 Trimethylamine methyltransferase (MTTB) PCI15_RS01545 PF00860 Permease family PCI15_RS01555 PF07311 Dodecin PCI15_RS01570 PF03928 Haem-degrading PCI15_RS01575 PF00464 Serine hydroxymethyltransferase PCI15_RS01580 PF03313 Serine dehydratase alpha chain PCI15_RS01580 PF03315 Serine dehydratase beta chain PCI15_RS01595 PF01266 FAD dependent oxidoreductase PCI15_RS01610 PF01970 Tripartite tricarboxylate transporter TctA family PCI15_RS01615 PF03401 Tripartite tricarboxylate transporter family receptor PCI15_RS01620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01620 PF03466 LysR substrate binding domain PCI15_RS01625 PF00403 Heavy-metal-associated domain PCI15_RS01635 PF13411 MerR HTH family regulatory protein PCI15_RS01645 PF01810 LysE type translocator PCI15_RS01655 PF01910 Thiamine-binding protein PCI15_RS01660 PF00171 Aldehyde dehydrogenase family PCI15_RS01670 PF04227 Indigoidine synthase A like protein PCI15_RS01675 PF00294 pfkB family carbohydrate kinase PCI15_RS01680 PF01037 Lrp/AsnC ligand binding domain PCI15_RS01685 PF00491 Arginase family PCI15_RS01690 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS01700 PF01037 Lrp/AsnC ligand binding domain PCI15_RS01705 PF00072 Response regulator receiver domain PCI15_RS01710 PF00072 Response regulator receiver domain PCI15_RS01710 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS01715 PF01547 Bacterial extracellular solute-binding protein PCI15_RS01720 PF17149 Periplasmic sensor domain found in signal transduction proteins PCI15_RS01720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS01720 PF01627 Hpt domain PCI15_RS01720 PF00072 Response regulator receiver domain PCI15_RS01720 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS01720 PF00672 HAMP domain PCI15_RS01735 PF01645 Conserved region in glutamate synthase PCI15_RS01760 PF00171 Aldehyde dehydrogenase family PCI15_RS01770 PF13378 Enolase C-terminal domain-like PCI15_RS01770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS01775 PF00732 GMC oxidoreductase PCI15_RS01775 PF05199 GMC oxidoreductase PCI15_RS01800 PF00873 AcrB/AcrD/AcrF family PCI15_RS01815 PF00356 Bacterial regulatory proteins, lacI family PCI15_RS01815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PCI15_RS01820 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS01825 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS01830 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS01835 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PCI15_RS01840 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PCI15_RS01845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS01845 PF13378 Enolase C-terminal domain-like PCI15_RS01855 PF00171 Aldehyde dehydrogenase family PCI15_RS01860 PF00005 ABC transporter PCI15_RS01860 PF00664 ABC transporter transmembrane region PCI15_RS01870 PF00857 Isochorismatase family PCI15_RS01880 PF03466 LysR substrate binding domain PCI15_RS01880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS01895 PF00884 Sulfatase PCI15_RS01900 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS01905 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS01910 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS01915 PF00005 ABC transporter PCI15_RS01920 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS01925 PF00989 PAS fold PCI15_RS01925 PF00072 Response regulator receiver domain PCI15_RS01925 PF01627 Hpt domain PCI15_RS01925 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS01925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS01925 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS01930 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS01930 PF00072 Response regulator receiver domain PCI15_RS01940 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS01965 PF03880 DbpA RNA binding domain PCI15_RS01965 PF00271 Helicase conserved C-terminal domain PCI15_RS01965 PF00270 DEAD/DEAH box helicase PCI15_RS01970 PF01274 Malate synthase PCI15_RS01975 PF01329 Pterin 4 alpha carbinolamine dehydratase PCI15_RS01990 PF06969 HemN C-terminal domain PCI15_RS01990 PF04055 Radical SAM superfamily PCI15_RS01995 PF01725 Ham1 family PCI15_RS02005 PF02325 YGGT family PCI15_RS02010 PF03807 NADP oxidoreductase coenzyme F420-dependent PCI15_RS02010 PF14748 Pyrroline-5-carboxylate reductase dimerisation PCI15_RS02015 PF01168 Alanine racemase, N-terminal domain PCI15_RS02020 PF00437 Type II/IV secretion system protein PCI15_RS02025 PF00437 Type II/IV secretion system protein PCI15_RS02030 PF13977 BetI-type transcriptional repressor, C-terminal PCI15_RS02030 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS02040 PF00355 Rieske [2Fe-2S] domain PCI15_RS02050 PF00037 4Fe-4S binding domain PCI15_RS02055 PF01467 Cytidylyltransferase-like PCI15_RS02060 PF01435 Peptidase family M48 PCI15_RS02075 PF00448 SRP54-type protein, GTPase domain PCI15_RS02075 PF02881 SRP54-type protein, helical bundle domain PCI15_RS02080 PF00005 ABC transporter PCI15_RS02085 PF18075 FtsX extracellular domain PCI15_RS02090 PF00140 Sigma-70 factor, region 1.2 PCI15_RS02090 PF04542 Sigma-70 region 2 PCI15_RS02090 PF04545 Sigma-70, region 4 PCI15_RS02095 PF04241 Protein of unknown function (DUF423) PCI15_RS02100 PF02597 ThiS family PCI15_RS02100 PF05690 Thiazole biosynthesis protein ThiG PCI15_RS02105 PF05690 Thiazole biosynthesis protein ThiG PCI15_RS02110 PF02390 Putative methyltransferase PCI15_RS02115 PF01070 FMN-dependent dehydrogenase PCI15_RS02120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PCI15_RS02120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PCI15_RS02125 PF05161 MOFRL family PCI15_RS02125 PF13660 Domain of unknown function (DUF4147) PCI15_RS02130 PF01966 HD domain PCI15_RS02130 PF00672 HAMP domain PCI15_RS02135 PF00563 EAL domain PCI15_RS02135 PF08668 HDOD domain PCI15_RS02140 PF00920 Dehydratase family PCI15_RS02155 PF00072 Response regulator receiver domain PCI15_RS02155 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS02165 PF01435 Peptidase family M48 PCI15_RS02170 PF05987 Bacterial protein of unknown function (DUF898) PCI15_RS02175 PF00696 Amino acid kinase family PCI15_RS02175 PF00583 Acetyltransferase (GNAT) family PCI15_RS02180 PF07687 Peptidase dimerisation domain PCI15_RS02180 PF01546 Peptidase family M20/M25/M40 PCI15_RS02185 PF01384 Phosphate transporter family PCI15_RS02190 PF01865 Protein of unknown function DUF47 PCI15_RS02195 PF08335 GlnD PII-uridylyltransferase PCI15_RS02195 PF03710 Glutamate-ammonia ligase adenylyltransferase PCI15_RS02205 PF01053 Cys/Met metabolism PLP-dependent enzyme PCI15_RS02210 PF07690 Major Facilitator Superfamily PCI15_RS02215 PF00155 Aminotransferase class I and II PCI15_RS02215 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS02220 PF00501 AMP-binding enzyme PCI15_RS02220 PF14535 AMP-binding enzyme C-terminal domain PCI15_RS02225 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS02230 PF07690 Major Facilitator Superfamily PCI15_RS02235 PF12833 Helix-turn-helix domain PCI15_RS02240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PCI15_RS02240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PCI15_RS02245 PF02770 Acyl-CoA dehydrogenase, middle domain PCI15_RS02245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PCI15_RS02245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PCI15_RS02255 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS02260 PF01965 DJ-1/PfpI family PCI15_RS02260 PF12833 Helix-turn-helix domain PCI15_RS02265 PF01063 Amino-transferase class IV PCI15_RS02270 PF00884 Sulfatase PCI15_RS02275 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PCI15_RS02280 PF01075 Glycosyltransferase family 9 (heptosyltransferase) PCI15_RS02305 PF10707 PhoP regulatory network protein YrbL PCI15_RS02310 PF00535 Glycosyl transferase family 2 PCI15_RS02315 PF00534 Glycosyl transferases group 1 PCI15_RS02315 PF13439 Glycosyltransferase Family 4 PCI15_RS02320 PF01755 Glycosyltransferase family 25 (LPS biosynthesis protein) PCI15_RS02335 PF03279 Bacterial lipid A biosynthesis acyltransferase PCI15_RS02340 PF00664 ABC transporter transmembrane region PCI15_RS02340 PF00005 ABC transporter PCI15_RS02345 PF00294 pfkB family carbohydrate kinase PCI15_RS02345 PF01467 Cytidylyltransferase-like PCI15_RS02355 PF00248 Aldo/keto reductase family PCI15_RS02360 PF01266 FAD dependent oxidoreductase PCI15_RS02365 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) PCI15_RS02370 PF13580 SIS domain PCI15_RS02375 PF01491 Frataxin-like domain PCI15_RS02380 PF00360 Phytochrome region PCI15_RS02380 PF00563 EAL domain PCI15_RS02380 PF01590 GAF domain PCI15_RS02380 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS02385 PF13627 Prokaryotic lipoprotein-attachment site PCI15_RS02390 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PCI15_RS02390 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PCI15_RS02395 PF01678 Diaminopimelate epimerase PCI15_RS02405 PF02899 Phage integrase, N-terminal SAM-like domain PCI15_RS02405 PF00589 Phage integrase family PCI15_RS02430 PF00293 NUDIX domain PCI15_RS02435 PF13419 Haloacid dehalogenase-like hydrolase PCI15_RS02440 PF01479 S4 domain PCI15_RS02445 PF01430 Hsp33 protein PCI15_RS02450 PF01293 Phosphoenolpyruvate carboxykinase PCI15_RS02455 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS02455 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS02455 PF00563 EAL domain PCI15_RS02465 PF07702 UTRA domain PCI15_RS02465 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS02470 PF17391 Urocanase N-terminal domain PCI15_RS02470 PF01175 Urocanase Rossmann-like domain PCI15_RS02470 PF17392 Urocanase C-terminal domain PCI15_RS02475 PF00221 Aromatic amino acid lyase PCI15_RS02480 PF00221 Aromatic amino acid lyase PCI15_RS02485 PF01979 Amidohydrolase family PCI15_RS02510 PF17755 UvrA DNA-binding domain PCI15_RS02510 PF17760 UvrA interaction domain PCI15_RS02515 PF00436 Single-strand binding protein family PCI15_RS02520 PF04321 RmlD substrate binding domain PCI15_RS02525 PF04247 Invasion gene expression up-regulator, SirB PCI15_RS02530 PF04055 Radical SAM superfamily PCI15_RS02530 PF06463 Molybdenum Cofactor Synthesis C PCI15_RS02535 PF01037 Lrp/AsnC ligand binding domain PCI15_RS02550 PF01967 MoaC family PCI15_RS02555 PF01553 Acyltransferase PCI15_RS02560 PF04024 PspC domain PCI15_RS02570 PF04012 PspA/IM30 family PCI15_RS02575 PF02954 Bacterial regulatory protein, Fis family PCI15_RS02575 PF00158 Sigma-54 interaction domain PCI15_RS02580 PF02801 Beta-ketoacyl synthase, C-terminal domain PCI15_RS02580 PF00109 Beta-ketoacyl synthase, N-terminal domain PCI15_RS02585 PF07977 FabA-like domain PCI15_RS02590 PF00348 Polyprenyl synthetase PCI15_RS02595 PF00829 Ribosomal prokaryotic L21 protein PCI15_RS02600 PF01016 Ribosomal L27 protein PCI15_RS02605 PF01926 50S ribosome-binding GTPase PCI15_RS02605 PF01018 GTP1/OBG PCI15_RS02610 PF01472 PUA domain PCI15_RS02610 PF00696 Amino acid kinase family PCI15_RS02615 PF01649 Ribosomal protein S20 PCI15_RS02620 PF03023 Lipid II flippase MurJ PCI15_RS02625 PF06574 FAD synthetase PCI15_RS02625 PF01687 Riboflavin kinase PCI15_RS02630 PF08264 Anticodon-binding domain of tRNA PCI15_RS02630 PF06827 Zinc finger found in FPG and IleRS PCI15_RS02630 PF00133 tRNA synthetases class I (I, L, M and V) PCI15_RS02635 PF01252 Signal peptidase (SPase) II PCI15_RS02640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS02665 PF07963 Prokaryotic N-terminal methylation motif PCI15_RS02665 PF00114 Pilin (bacterial filament) PCI15_RS02690 PF05567 Neisseria PilC beta-propeller domain PCI15_RS02695 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor PCI15_RS02695 PF07963 Prokaryotic N-terminal methylation motif PCI15_RS02720 PF05567 Neisseria PilC beta-propeller domain PCI15_RS02725 PF07963 Prokaryotic N-terminal methylation motif PCI15_RS02725 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor PCI15_RS02730 PF01266 FAD dependent oxidoreductase PCI15_RS02735 PF02540 NAD synthase PCI15_RS02745 PF03466 LysR substrate binding domain PCI15_RS02745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS02750 PF02515 CoA-transferase family III PCI15_RS02755 PF02311 AraC-like ligand binding domain PCI15_RS02755 PF12833 Helix-turn-helix domain PCI15_RS02765 PF01032 FecCD transport family PCI15_RS02770 PF01497 Periplasmic binding protein PCI15_RS02775 PF00005 ABC transporter PCI15_RS02785 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS02785 PF00593 TonB dependent receptor PCI15_RS02790 PF12833 Helix-turn-helix domain PCI15_RS02875 PF13356 Arm DNA-binding domain PCI15_RS02875 PF00589 Phage integrase family PCI15_RS02885 PF01668 SmpB protein PCI15_RS02890 PF03364 Polyketide cyclase / dehydrase and lipid transport PCI15_RS02895 PF03658 RnfH family Ubiquitin PCI15_RS02900 PF04355 SmpA / OmlA family PCI15_RS02905 PF01475 Ferric uptake regulator family PCI15_RS02910 PF02463 RecF/RecN/SMC N terminal domain PCI15_RS02915 PF01025 GrpE PCI15_RS02920 PF00012 Hsp70 protein PCI15_RS02925 PF00684 DnaJ central domain PCI15_RS02925 PF01556 DnaJ C terminal domain PCI15_RS02925 PF00226 DnaJ domain PCI15_RS02930 PF00132 Bacterial transferase hexapeptide (six repeats) PCI15_RS02930 PF06426 Serine acetyltransferase, N-terminal PCI15_RS02935 PF01113 Dihydrodipicolinate reductase, N-terminus PCI15_RS02935 PF05173 Dihydrodipicolinate reductase, C-terminus PCI15_RS02940 PF01784 NIF3 (NGG1p interacting factor 3) PCI15_RS02945 PF01694 Rhomboid family PCI15_RS02955 PF00293 NUDIX domain PCI15_RS02965 PF00571 CBS domain PCI15_RS02965 PF03471 Transporter associated domain PCI15_RS02965 PF01595 Cyclin M transmembrane N-terminal domain PCI15_RS02975 PF02978 Signal peptide binding domain PCI15_RS02975 PF02881 SRP54-type protein, helical bundle domain PCI15_RS02975 PF00448 SRP54-type protein, GTPase domain PCI15_RS02980 PF00886 Ribosomal protein S16 PCI15_RS02985 PF01782 RimM N-terminal domain PCI15_RS02985 PF05239 PRC-barrel domain PCI15_RS02990 PF01746 tRNA (Guanine-1)-methyltransferase PCI15_RS02995 PF01245 Ribosomal protein L19 PCI15_RS03005 PF02899 Phage integrase, N-terminal SAM-like domain PCI15_RS03005 PF00589 Phage integrase family PCI15_RS03010 PF13098 Thioredoxin-like domain PCI15_RS03010 PF10411 Disulfide bond isomerase protein N-terminus PCI15_RS03015 PF03447 Homoserine dehydrogenase, NAD binding domain PCI15_RS03015 PF00742 Homoserine dehydrogenase PCI15_RS03015 PF01842 ACT domain PCI15_RS03020 PF14821 Threonine synthase N terminus PCI15_RS03020 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS03025 PF02698 DUF218 domain PCI15_RS03030 PF01368 DHH family PCI15_RS03030 PF17768 RecJ OB domain PCI15_RS03030 PF02272 DHHA1 domain PCI15_RS03040 PF00672 HAMP domain PCI15_RS03040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS03040 PF17200 Single Cache domain 2 PCI15_RS03045 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS03045 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS03045 PF13188 PAS domain PCI15_RS03045 PF00563 EAL domain PCI15_RS03050 PF00293 NUDIX domain PCI15_RS03060 PF00149 Calcineurin-like phosphoesterase PCI15_RS03065 PF17092 Penicillin-binding protein OB-like domain PCI15_RS03065 PF00912 Transglycosylase PCI15_RS03065 PF00905 Penicillin binding protein transpeptidase domain PCI15_RS03070 PF11104 Type IV pilus assembly protein PilM; PCI15_RS03080 PF04350 Pilus assembly protein, PilO PCI15_RS03085 PF04351 Pilus assembly protein, PilP PCI15_RS03090 PF11741 AMIN domain PCI15_RS03090 PF00263 Bacterial type II and III secretion system protein PCI15_RS03090 PF03958 Bacterial type II/III secretion system short domain PCI15_RS03090 PF07660 Secretin and TonB N terminus short domain PCI15_RS03095 PF01202 Shikimate kinase PCI15_RS03100 PF01761 3-dehydroquinate synthase PCI15_RS03110 PF01645 Conserved region in glutamate synthase PCI15_RS03110 PF00310 Glutamine amidotransferases class-II PCI15_RS03110 PF04898 Glutamate synthase central domain PCI15_RS03110 PF01493 GXGXG motif PCI15_RS03115 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PCI15_RS03115 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS03120 PF01208 Uroporphyrinogen decarboxylase (URO-D) PCI15_RS03125 PF00484 Carbonic anhydrase PCI15_RS03130 PF01053 Cys/Met metabolism PLP-dependent enzyme PCI15_RS03135 PF18073 Rubredoxin metal binding domain PCI15_RS03140 PF07238 PilZ domain PCI15_RS03145 PF00005 ABC transporter PCI15_RS03145 PF12848 ABC transporter PCI15_RS03150 PF03477 ATP cone domain PCI15_RS03155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PCI15_RS03155 PF01872 RibD C-terminal domain PCI15_RS03160 PF00677 Lumazine binding domain PCI15_RS03165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PCI15_RS03165 PF00925 GTP cyclohydrolase II PCI15_RS03170 PF00885 6,7-dimethyl-8-ribityllumazine synthase PCI15_RS03175 PF01029 NusB family PCI15_RS03180 PF00586 AIR synthase related protein, N-terminal domain PCI15_RS03180 PF02769 AIR synthase related protein, C-terminal domain PCI15_RS03185 PF04608 Phosphatidylglycerophosphatase A PCI15_RS03200 PF00072 Response regulator receiver domain PCI15_RS03200 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS03210 PF00925 GTP cyclohydrolase II PCI15_RS03215 PF02780 Transketolase, C-terminal domain PCI15_RS03215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PCI15_RS03215 PF02779 Transketolase, pyrimidine binding domain PCI15_RS03220 PF00348 Polyprenyl synthetase PCI15_RS03225 PF02609 Exonuclease VII small subunit PCI15_RS03230 PF01618 MotA/TolQ/ExbB proton channel family PCI15_RS03235 PF13677 Membrane MotB of proton-channel complex MotA/MotB PCI15_RS03235 PF00691 OmpA family PCI15_RS03255 PF00072 Response regulator receiver domain PCI15_RS03255 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS03260 PF01584 CheW-like domain PCI15_RS03260 PF02895 Signal transducing histidine kinase, homodimeric domain PCI15_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS03260 PF01627 Hpt domain PCI15_RS03265 PF01584 CheW-like domain PCI15_RS03270 PF08447 PAS fold PCI15_RS03270 PF08447 PAS fold PCI15_RS03270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS03270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS03275 PF01739 CheR methyltransferase, SAM binding domain PCI15_RS03275 PF03705 CheR methyltransferase, all-alpha domain PCI15_RS03280 PF03975 CheD chemotactic sensory transduction PCI15_RS03285 PF00072 Response regulator receiver domain PCI15_RS03285 PF01339 CheB methylesterase PCI15_RS03290 PF02203 Tar ligand binding domain homologue PCI15_RS03290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS03290 PF00672 HAMP domain PCI15_RS03295 PF13466 STAS domain PCI15_RS03300 PF00072 Response regulator receiver domain PCI15_RS03300 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS03305 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PCI15_RS03310 PF06629 MltA-interacting protein MipA PCI15_RS03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS03315 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS03315 PF08521 Two-component sensor kinase N-terminal PCI15_RS03320 PF00072 Response regulator receiver domain PCI15_RS03320 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS03325 PF00873 AcrB/AcrD/AcrF family PCI15_RS03330 PF13533 Biotin-lipoyl like PCI15_RS03335 PF02321 Outer membrane efflux protein PCI15_RS03340 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS03340 PF07702 UTRA domain PCI15_RS03345 PF00582 Universal stress protein family PCI15_RS03350 PF01970 Tripartite tricarboxylate transporter TctA family PCI15_RS03360 PF03401 Tripartite tricarboxylate transporter family receptor PCI15_RS03365 PF00171 Aldehyde dehydrogenase family PCI15_RS03370 PF00501 AMP-binding enzyme PCI15_RS03370 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS03375 PF07885 Ion channel PCI15_RS03380 PF03466 LysR substrate binding domain PCI15_RS03380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS03385 PF01810 LysE type translocator PCI15_RS03405 PF00155 Aminotransferase class I and II PCI15_RS03410 PF03466 LysR substrate binding domain PCI15_RS03410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS03415 PF01966 HD domain PCI15_RS03420 PF01272 Transcription elongation factor, GreA/GreB, C-term PCI15_RS03420 PF03449 Transcription elongation factor, N-terminal PCI15_RS03440 PF13847 Methyltransferase domain PCI15_RS03445 PF07687 Peptidase dimerisation domain PCI15_RS03445 PF01546 Peptidase family M20/M25/M40 PCI15_RS03450 PF14602 Hexapeptide repeat of succinyl-transferase PCI15_RS03450 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PCI15_RS03455 PF03960 ArsC family PCI15_RS03460 PF00155 Aminotransferase class I and II PCI15_RS03475 PF00873 AcrB/AcrD/AcrF family PCI15_RS03495 PF02470 MlaD protein PCI15_RS03500 PF04403 Paraquat-inducible protein A PCI15_RS03505 PF04403 Paraquat-inducible protein A PCI15_RS03515 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS03545 PF00258 Flavodoxin PCI15_RS03550 PF00593 TonB dependent receptor PCI15_RS03550 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS03565 PF12833 Helix-turn-helix domain PCI15_RS03565 PF07883 Cupin domain PCI15_RS03570 PF00009 Elongation factor Tu GTP binding domain PCI15_RS03570 PF16658 Class II release factor RF3, C-terminal domain PCI15_RS03575 PF01026 TatD related DNase PCI15_RS03580 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS03580 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS03580 PF00563 EAL domain PCI15_RS03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS03585 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS03585 PF09308 LuxQ, periplasmic PCI15_RS03585 PF00072 Response regulator receiver domain PCI15_RS03590 PF01739 CheR methyltransferase, SAM binding domain PCI15_RS03590 PF03705 CheR methyltransferase, all-alpha domain PCI15_RS03595 PF02801 Beta-ketoacyl synthase, C-terminal domain PCI15_RS03595 PF00109 Beta-ketoacyl synthase, N-terminal domain PCI15_RS03600 PF13488 Glycine zipper PCI15_RS03600 PF00691 OmpA family PCI15_RS03625 PF08335 GlnD PII-uridylyltransferase PCI15_RS03625 PF01966 HD domain PCI15_RS03625 PF01909 Nucleotidyltransferase domain PCI15_RS03625 PF01842 ACT domain PCI15_RS03630 PF00557 Metallopeptidase family M24 PCI15_RS03635 PF00318 Ribosomal protein S2 PCI15_RS03640 PF00889 Elongation factor TS PCI15_RS03645 PF00696 Amino acid kinase family PCI15_RS03650 PF01765 Ribosome recycling factor PCI15_RS03655 PF01255 Putative undecaprenyl diphosphate synthase PCI15_RS03665 PF13180 PDZ domain PCI15_RS03665 PF17820 PDZ domain PCI15_RS03665 PF02163 Peptidase family M50 PCI15_RS03670 PF01103 Surface antigen PCI15_RS03670 PF07244 Surface antigen variable number repeat PCI15_RS03680 PF14602 Hexapeptide repeat of succinyl-transferase PCI15_RS03680 PF00132 Bacterial transferase hexapeptide (six repeats) PCI15_RS03680 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD PCI15_RS03685 PF07977 FabA-like domain PCI15_RS03690 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 PCI15_RS03690 PF00132 Bacterial transferase hexapeptide (six repeats) PCI15_RS03695 PF02684 Lipid-A-disaccharide synthetase PCI15_RS03700 PF01351 Ribonuclease HII PCI15_RS03705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PCI15_RS03705 PF14579 Helix-hairpin-helix motif PCI15_RS03705 PF02811 PHP domain PCI15_RS03705 PF01336 OB-fold nucleic acid binding domain PCI15_RS03705 PF07733 Bacterial DNA polymerase III alpha NTPase domain PCI15_RS03710 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit PCI15_RS03715 PF01171 PP-loop family PCI15_RS03715 PF09179 TilS substrate binding domain PCI15_RS03715 PF11734 TilS substrate C-terminal domain PCI15_RS03720 PF00117 Glutamine amidotransferase class-I PCI15_RS03720 PF06418 CTP synthase N-terminus PCI15_RS03725 PF00113 Enolase, C-terminal TIM barrel domain PCI15_RS03725 PF03952 Enolase, N-terminal domain PCI15_RS03730 PF04977 Septum formation initiator PCI15_RS03735 PF01142 tRNA pseudouridine synthase D (TruD) PCI15_RS03740 PF01975 Survival protein SurE PCI15_RS03755 PF01476 LysM domain PCI15_RS03755 PF01551 Peptidase family M23 PCI15_RS03760 PF04545 Sigma-70, region 4 PCI15_RS03760 PF04542 Sigma-70 region 2 PCI15_RS03760 PF04539 Sigma-70 region 3 PCI15_RS03760 PF00140 Sigma-70 factor, region 1.2 PCI15_RS03765 PF02803 Thiolase, C-terminal domain PCI15_RS03765 PF00108 Thiolase, N-terminal domain PCI15_RS03770 PF02569 Pantoate-beta-alanine ligase PCI15_RS03775 PF02548 Ketopantoate hydroxymethyltransferase PCI15_RS03780 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PCI15_RS03785 PF12626 Polymerase A arginine-rich C-terminus PCI15_RS03785 PF12627 Probable RNA and SrmB- binding site of polymerase A PCI15_RS03785 PF01743 Poly A polymerase head domain PCI15_RS03790 PF02954 Bacterial regulatory protein, Fis family PCI15_RS03790 PF00072 Response regulator receiver domain PCI15_RS03790 PF00158 Sigma-54 interaction domain PCI15_RS03795 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS03795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS03805 PF00749 tRNA synthetases class I (E and Q), catalytic domain PCI15_RS03810 PF01258 Prokaryotic dksA/traR C4-type zinc finger PCI15_RS03815 PF00155 Aminotransferase class I and II PCI15_RS03820 PF03749 Sugar fermentation stimulation protein RE domain PCI15_RS03820 PF17746 SfsA N-terminal OB domain PCI15_RS03825 PF04143 Sulphur transport PCI15_RS03840 PF14814 Bifunctional transglycosylase second domain PCI15_RS03840 PF00905 Penicillin binding protein transpeptidase domain PCI15_RS03840 PF00912 Transglycosylase PCI15_RS03850 PF00034 Cytochrome c PCI15_RS03855 PF00115 Cytochrome C and Quinol oxidase polypeptide I PCI15_RS03865 PF00510 Cytochrome c oxidase subunit III PCI15_RS03875 PF07728 AAA domain (dynein-related subfamily) PCI15_RS03875 PF08406 CbbQ/NirQ/NorQ C-terminal PCI15_RS03885 PF10414 Sirohaem synthase dimerisation region PCI15_RS03885 PF14824 Sirohaem biosynthesis protein central PCI15_RS03885 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PCI15_RS03890 PF10414 Sirohaem synthase dimerisation region PCI15_RS03890 PF14824 Sirohaem biosynthesis protein central PCI15_RS03890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PCI15_RS03895 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PCI15_RS03905 PF17805 AsnC-like ligand binding domain PCI15_RS03910 PF17805 AsnC-like ligand binding domain PCI15_RS03910 PF13404 AsnC-type helix-turn-helix domain PCI15_RS03915 PF17805 AsnC-like ligand binding domain PCI15_RS03920 PF04055 Radical SAM superfamily PCI15_RS03920 PF13186 Iron-sulfur cluster-binding domain PCI15_RS03930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PCI15_RS03935 PF03264 NapC/NirT cytochrome c family, N-terminal region PCI15_RS03940 PF00027 Cyclic nucleotide-binding domain PCI15_RS03940 PF13545 Crp-like helix-turn-helix domain PCI15_RS03950 PF12706 Beta-lactamase superfamily domain PCI15_RS03955 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PCI15_RS03960 PF02690 Na+/Pi-cotransporter PCI15_RS03965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PCI15_RS03965 PF00005 ABC transporter PCI15_RS03970 PF12911 N-terminal TM domain of oligopeptide transport permease C PCI15_RS03970 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS03975 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS03980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PCI15_RS03985 PF03466 LysR substrate binding domain PCI15_RS03985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS03995 PF05114 Protein of unknown function (DUF692) PCI15_RS04015 PF00202 Aminotransferase class-III PCI15_RS04020 PF02581 Thiamine monophosphate synthase PCI15_RS04025 PF00654 Voltage gated chloride channel PCI15_RS04030 PF01118 Semialdehyde dehydrogenase, NAD binding domain PCI15_RS04030 PF02774 Semialdehyde dehydrogenase, dimerisation domain PCI15_RS04035 PF01521 Iron-sulphur cluster biosynthesis PCI15_RS04040 PF03702 Anhydro-N-acetylmuramic acid kinase PCI15_RS04045 PF01551 Peptidase family M23 PCI15_RS04045 PF04225 Opacity-associated protein A LysM-like domain PCI15_RS04050 PF00579 tRNA synthetases class I (W and Y) PCI15_RS04090 PF02600 Disulfide bond formation protein DsbB PCI15_RS04100 PF00731 AIR carboxylase PCI15_RS04105 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PCI15_RS04105 PF02222 ATP-grasp domain PCI15_RS04120 PF04546 Sigma-70, non-essential region PCI15_RS04120 PF03979 Sigma-70 factor, region 1.1 PCI15_RS04120 PF04539 Sigma-70 region 3 PCI15_RS04120 PF00140 Sigma-70 factor, region 1.2 PCI15_RS04120 PF04542 Sigma-70 region 2 PCI15_RS04120 PF04545 Sigma-70, region 4 PCI15_RS04125 PF10410 DnaB-helicase binding domain of primase PCI15_RS04125 PF08278 DNA primase DnaG DnaB-binding PCI15_RS04125 PF13662 Toprim domain PCI15_RS04125 PF08275 DNA primase catalytic core, N-terminal domain PCI15_RS04125 PF01807 CHC2 zinc finger PCI15_RS04135 PF01165 Ribosomal protein S21 PCI15_RS04140 PF00814 Glycoprotease family PCI15_RS04145 PF02660 Glycerol-3-phosphate acyltransferase PCI15_RS04150 PF02152 Dihydroneopterin aldolase PCI15_RS04155 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PCI15_RS04155 PF01227 GTP cyclohydrolase I PCI15_RS04160 PF04011 LemA family PCI15_RS04165 PF01435 Peptidase family M48 PCI15_RS04170 PF01743 Poly A polymerase head domain PCI15_RS04170 PF01966 HD domain PCI15_RS04170 PF12627 Probable RNA and SrmB- binding site of polymerase A PCI15_RS04175 PF00581 Rhodanese-like domain PCI15_RS04180 PF00149 Calcineurin-like phosphoesterase PCI15_RS04185 PF04379 ApaG domain PCI15_RS04190 PF00398 Ribosomal RNA adenine dimethylase PCI15_RS04195 PF04166 Pyridoxal phosphate biosynthetic protein PdxA PCI15_RS04200 PF00639 PPIC-type PPIASE domain PCI15_RS04200 PF09312 SurA N-terminal domain PCI15_RS04205 PF03968 OstA-like protein PCI15_RS04205 PF04453 LPS transport system D PCI15_RS04210 PF01636 Phosphotransferase enzyme family PCI15_RS04215 PF00483 Nucleotidyl transferase PCI15_RS04220 PF05099 Tellurite resistance protein TerB PCI15_RS04220 PF00226 DnaJ domain PCI15_RS04230 PF00834 Ribulose-phosphate 3 epimerase family PCI15_RS04235 PF13419 Haloacid dehalogenase-like hydrolase PCI15_RS04240 PF07683 Cobalamin synthesis protein cobW C-terminal domain PCI15_RS04240 PF02492 CobW/HypB/UreG, nucleotide-binding domain PCI15_RS04260 PF01047 MarR family PCI15_RS04270 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS04275 PF00571 CBS domain PCI15_RS04275 PF00005 ABC transporter PCI15_RS04280 PF03466 LysR substrate binding domain PCI15_RS04280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS04285 PF16350 FAD dependent oxidoreductase central domain PCI15_RS04285 PF01266 FAD dependent oxidoreductase PCI15_RS04285 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS04285 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS04295 PF07995 Glucose / Sorbosone dehydrogenase PCI15_RS04300 PF01152 Bacterial-like globin PCI15_RS04310 PF03466 LysR substrate binding domain PCI15_RS04310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS04315 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS04320 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS04320 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS04325 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS04325 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS04340 PF14537 Cytochrome c3 PCI15_RS04340 PF00890 FAD binding domain PCI15_RS04345 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS04350 PF13378 Enolase C-terminal domain-like PCI15_RS04350 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS04355 PF13378 Enolase C-terminal domain-like PCI15_RS04355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS04360 PF03466 LysR substrate binding domain PCI15_RS04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS04370 PF00355 Rieske [2Fe-2S] domain PCI15_RS04375 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS04375 PF14759 Reductase C-terminal PCI15_RS04380 PF00557 Metallopeptidase family M24 PCI15_RS04385 PF02548 Ketopantoate hydroxymethyltransferase PCI15_RS04410 PF00459 Inositol monophosphatase family PCI15_RS04415 PF08671 Anti-repressor SinI PCI15_RS04415 PF01381 Helix-turn-helix PCI15_RS04420 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS04420 PF00107 Zinc-binding dehydrogenase PCI15_RS04425 PF00155 Aminotransferase class I and II PCI15_RS04435 PF01965 DJ-1/PfpI family PCI15_RS04460 PF00158 Sigma-54 interaction domain PCI15_RS04460 PF00072 Response regulator receiver domain PCI15_RS04460 PF02954 Bacterial regulatory protein, Fis family PCI15_RS04465 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS04465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS04465 PF00989 PAS fold PCI15_RS04475 PF03150 Di-haem cytochrome c peroxidase PCI15_RS04480 PF03150 Di-haem cytochrome c peroxidase PCI15_RS04480 PF00034 Cytochrome c PCI15_RS04485 PF00355 Rieske [2Fe-2S] domain PCI15_RS04490 PF00384 Molybdopterin oxidoreductase PCI15_RS04490 PF01568 Molydopterin dinucleotide binding domain PCI15_RS04490 PF18465 Rieske 3Fe-4S PCI15_RS04500 PF00563 EAL domain PCI15_RS04500 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS04500 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS04505 PF01062 Bestrophin, RFP-TM, chloride channel PCI15_RS04515 PF00117 Glutamine amidotransferase class-I PCI15_RS04520 PF02885 Glycosyl transferase family, helical bundle domain PCI15_RS04520 PF00591 Glycosyl transferase family, a/b domain PCI15_RS04525 PF00218 Indole-3-glycerol phosphate synthase PCI15_RS04530 PF02566 OsmC-like protein PCI15_RS04540 PF01250 Ribosomal protein S6 PCI15_RS04545 PF01084 Ribosomal protein S18 PCI15_RS04550 PF03948 Ribosomal protein L9, C-terminal domain PCI15_RS04550 PF01281 Ribosomal protein L9, N-terminal domain PCI15_RS04555 PF03796 DnaB-like helicase C terminal domain PCI15_RS04555 PF00772 DnaB-like helicase N terminal domain PCI15_RS04575 PF12852 Cupin PCI15_RS04575 PF12833 Helix-turn-helix domain PCI15_RS04585 PF00462 Glutaredoxin PCI15_RS04600 PF00171 Aldehyde dehydrogenase family PCI15_RS04605 PF01467 Cytidylyltransferase-like PCI15_RS04615 PF02590 Predicted SPOUT methyltransferase PCI15_RS04620 PF03717 Penicillin-binding Protein dimerisation domain PCI15_RS04620 PF00905 Penicillin binding protein transpeptidase domain PCI15_RS04625 PF01098 Cell cycle protein PCI15_RS04630 PF13406 Transglycosylase SLT domain PCI15_RS04635 PF05036 Sporulation related domain PCI15_RS04635 PF03330 Lytic transglycolase PCI15_RS04640 PF07943 Penicillin-binding protein 5, C-terminal domain PCI15_RS04640 PF00768 D-alanyl-D-alanine carboxypeptidase PCI15_RS04645 PF01063 Amino-transferase class IV PCI15_RS04650 PF04359 Protein of unknown function (DUF493) PCI15_RS04655 PF03099 Biotin/lipoate A/B protein ligase family PCI15_RS04660 PF04055 Radical SAM superfamily PCI15_RS04660 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PCI15_RS04690 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS04700 PF00873 AcrB/AcrD/AcrF family PCI15_RS04705 PF03466 LysR substrate binding domain PCI15_RS04705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS04710 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS04715 PF14840 Processivity clamp loader gamma complex DNA pol III C-term PCI15_RS04715 PF06144 DNA polymerase III, delta subunit PCI15_RS04725 PF08264 Anticodon-binding domain of tRNA PCI15_RS04725 PF00133 tRNA synthetases class I (I, L, M and V) PCI15_RS04725 PF13603 Leucyl-tRNA synthetase, Domain 2 PCI15_RS04735 PF00795 Carbon-nitrogen hydrolase PCI15_RS04740 PF00571 CBS domain PCI15_RS04740 PF03471 Transporter associated domain PCI15_RS04745 PF02130 Uncharacterized protein family UPF0054 PCI15_RS04750 PF02562 PhoH-like protein PCI15_RS04755 PF04055 Radical SAM superfamily PCI15_RS04755 PF01938 TRAM domain PCI15_RS04755 PF00919 Uncharacterized protein family UPF0004 PCI15_RS04765 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS04765 PF08448 PAS fold PCI15_RS04765 PF00563 EAL domain PCI15_RS04770 PF04055 Radical SAM superfamily PCI15_RS04775 PF09285 Elongation factor P, C-terminal PCI15_RS04775 PF01132 Elongation factor P (EF-P) OB domain PCI15_RS04775 PF08207 Elongation factor P (EF-P) KOW-like domain PCI15_RS04780 PF00152 tRNA synthetases class II (D, K and N) PCI15_RS04785 PF00155 Aminotransferase class I and II PCI15_RS04790 PF00682 HMGL-like PCI15_RS04790 PF08502 LeuA allosteric (dimerisation) domain PCI15_RS04810 PF02954 Bacterial regulatory protein, Fis family PCI15_RS04810 PF00072 Response regulator receiver domain PCI15_RS04815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS04815 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS04825 PF00171 Aldehyde dehydrogenase family PCI15_RS04830 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS04835 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS04845 PF08402 TOBE domain PCI15_RS04845 PF00005 ABC transporter PCI15_RS04850 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS04850 PF00155 Aminotransferase class I and II PCI15_RS04855 PF03441 FAD binding domain of DNA photolyase PCI15_RS04855 PF00875 DNA photolyase PCI15_RS04860 PF08349 Protein of unknown function (DUF1722) PCI15_RS04865 PF01593 Flavin containing amine oxidoreductase PCI15_RS04880 PF13673 Acetyltransferase (GNAT) domain PCI15_RS04900 PF01037 Lrp/AsnC ligand binding domain PCI15_RS04900 PF13404 AsnC-type helix-turn-helix domain PCI15_RS04910 PF01235 Sodium:alanine symporter family PCI15_RS04915 PF00005 ABC transporter PCI15_RS04915 PF12848 ABC transporter PCI15_RS04920 PF03942 DTW domain PCI15_RS04940 PF06253 Trimethylamine methyltransferase (MTTB) PCI15_RS04945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS04945 PF03466 LysR substrate binding domain PCI15_RS04950 PF01810 LysE type translocator PCI15_RS04965 PF02954 Bacterial regulatory protein, Fis family PCI15_RS04965 PF00072 Response regulator receiver domain PCI15_RS04965 PF00158 Sigma-54 interaction domain PCI15_RS04970 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS04970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS04975 PF07690 Major Facilitator Superfamily PCI15_RS04990 PF13460 NAD(P)H-binding PCI15_RS05000 PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA PCI15_RS05025 PF00672 HAMP domain PCI15_RS05025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS05040 PF08264 Anticodon-binding domain of tRNA PCI15_RS05040 PF00133 tRNA synthetases class I (I, L, M and V) PCI15_RS05040 PF10458 Valyl tRNA synthetase tRNA binding arm PCI15_RS05050 PF02789 Cytosol aminopeptidase family, N-terminal domain PCI15_RS05050 PF00883 Cytosol aminopeptidase family, catalytic domain PCI15_RS05055 PF03739 Lipopolysaccharide export system permease LptF/LptG PCI15_RS05060 PF03739 Lipopolysaccharide export system permease LptF/LptG PCI15_RS05070 PF04143 Sulphur transport PCI15_RS05085 PF00258 Flavodoxin PCI15_RS05090 PF01925 Sulfite exporter TauE/SafE PCI15_RS05095 PF03462 PCRF domain PCI15_RS05095 PF00472 RF-1 domain PCI15_RS05100 PF01336 OB-fold nucleic acid binding domain PCI15_RS05100 PF00152 tRNA synthetases class II (D, K and N) PCI15_RS05110 PF03167 Uracil DNA glycosylase superfamily PCI15_RS05115 PF00892 EamA-like transporter family PCI15_RS05130 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS05135 PF02666 Phosphatidylserine decarboxylase PCI15_RS05140 PF00581 Rhodanese-like domain PCI15_RS05150 PF03193 RsgA GTPase PCI15_RS05155 PF00929 Exonuclease PCI15_RS05160 PF00672 HAMP domain PCI15_RS05160 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS05160 PF17200 Single Cache domain 2 PCI15_RS05165 PF08331 Domain of unknown function (DUF1730) PCI15_RS05170 PF03853 YjeF-related protein N-terminus PCI15_RS05170 PF01256 Carbohydrate kinase PCI15_RS05175 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PCI15_RS05180 PF01520 N-acetylmuramoyl-L-alanine amidase PCI15_RS05185 PF01119 DNA mismatch repair protein, C-terminal domain PCI15_RS05185 PF08676 MutL C terminal dimerisation domain PCI15_RS05195 PF17209 Hfq protein PCI15_RS05200 PF01926 50S ribosome-binding GTPase PCI15_RS05200 PF13167 GTP-binding GTPase N-terminal PCI15_RS05200 PF16360 GTP-binding GTPase Middle Region PCI15_RS05205 PF12221 Bacterial membrane protein N terminal PCI15_RS05205 PF01145 SPFH domain / Band 7 family PCI15_RS05210 PF01145 SPFH domain / Band 7 family PCI15_RS05220 PF13393 Histidyl-tRNA synthetase PCI15_RS05225 PF00709 Adenylosuccinate synthetase PCI15_RS05230 PF00459 Inositol monophosphatase family PCI15_RS05235 PF00588 SpoU rRNA Methylase family PCI15_RS05240 PF02082 Transcriptional regulator PCI15_RS05245 PF00266 Aminotransferase class-V PCI15_RS05250 PF01592 NifU-like N terminal domain PCI15_RS05255 PF01521 Iron-sulphur cluster biosynthesis PCI15_RS05260 PF00226 DnaJ domain PCI15_RS05260 PF07743 HSCB C-terminal oligomerisation domain PCI15_RS05265 PF00012 Hsp70 protein PCI15_RS05270 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS05275 PF04384 Iron-sulphur cluster assembly PCI15_RS05280 PF00334 Nucleoside diphosphate kinase PCI15_RS05285 PF04055 Radical SAM superfamily PCI15_RS05295 PF13464 Domain of unknown function (DUF4115) PCI15_RS05300 PF03129 Anticodon binding domain PCI15_RS05300 PF13393 Histidyl-tRNA synthetase PCI15_RS05305 PF09976 Tetratricopeptide repeat-like domain PCI15_RS05310 PF13360 PQQ-like domain PCI15_RS05315 PF01926 50S ribosome-binding GTPase PCI15_RS05315 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PCI15_RS05340 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS05340 PF00563 EAL domain PCI15_RS05340 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS05350 PF00857 Isochorismatase family PCI15_RS05360 PF01546 Peptidase family M20/M25/M40 PCI15_RS05360 PF07687 Peptidase dimerisation domain PCI15_RS05365 PF00892 EamA-like transporter family PCI15_RS05370 PF12852 Cupin PCI15_RS05370 PF12833 Helix-turn-helix domain PCI15_RS05380 PF03937 Flavinator of succinate dehydrogenase PCI15_RS05390 PF00890 FAD binding domain PCI15_RS05390 PF02910 Fumarate reductase flavoprotein C-term PCI15_RS05395 PF04542 Sigma-70 region 2 PCI15_RS05395 PF08281 Sigma-70, region 4 PCI15_RS05400 PF03873 Anti sigma-E protein RseA, C-terminal domain PCI15_RS05400 PF03872 Anti sigma-E protein RseA, N-terminal domain PCI15_RS05410 PF13180 PDZ domain PCI15_RS05415 PF00679 Elongation factor G C-terminus PCI15_RS05415 PF00009 Elongation factor Tu GTP binding domain PCI15_RS05415 PF06421 GTP-binding protein LepA C-terminus PCI15_RS05420 PF10502 Signal peptidase, peptidase S26 PCI15_RS05430 PF14622 Ribonuclease-III-like PCI15_RS05430 PF00035 Double-stranded RNA binding motif PCI15_RS05435 PF01926 50S ribosome-binding GTPase PCI15_RS05435 PF07650 KH domain PCI15_RS05440 PF02565 Recombination protein O C terminal PCI15_RS05440 PF11967 Recombination protein O N terminal PCI15_RS05445 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ PCI15_RS05450 PF01648 4'-phosphopantetheinyl transferase superfamily PCI15_RS05455 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS05460 PF13291 ACT domain PCI15_RS05460 PF04607 Region found in RelA / SpoT proteins PCI15_RS05460 PF02824 TGS domain PCI15_RS05465 PF03819 MazG nucleotide pyrophosphohydrolase domain PCI15_RS05475 PF00311 Phosphoenolpyruvate carboxylase PCI15_RS05480 PF05191 Adenylate kinase, active site lid PCI15_RS05485 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS05490 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS05495 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS05500 PF00005 ABC transporter PCI15_RS05505 PF00762 Ferrochelatase PCI15_RS05510 PF00588 SpoU rRNA Methylase family PCI15_RS05510 PF08032 RNA 2'-O ribose methyltransferase substrate binding PCI15_RS05515 PF00871 Acetokinase family PCI15_RS05520 PF01515 Phosphate acetyl/butaryl transferase PCI15_RS05525 PF01230 HIT domain PCI15_RS05530 PF04293 SpoVR like protein PCI15_RS05535 PF04285 Protein of unknown function (DUF444) PCI15_RS05540 PF08298 PrkA AAA domain PCI15_RS05540 PF06798 PrkA serine protein kinase C-terminal domain PCI15_RS05545 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PCI15_RS05545 PF00364 Biotin-requiring enzyme PCI15_RS05545 PF02817 e3 binding domain PCI15_RS05550 PF02779 Transketolase, pyrimidine binding domain PCI15_RS05550 PF02780 Transketolase, C-terminal domain PCI15_RS05555 PF00676 Dehydrogenase E1 component PCI15_RS05560 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PCI15_RS05560 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PCI15_RS05575 PF00691 OmpA family PCI15_RS05580 PF03795 YCII-related domain PCI15_RS05585 PF04279 Intracellular septation protein A PCI15_RS05595 PF01300 Telomere recombination PCI15_RS05605 PF00849 RNA pseudouridylate synthase PCI15_RS05605 PF01479 S4 domain PCI15_RS05610 PF00106 short chain dehydrogenase PCI15_RS05615 PF13419 Haloacid dehalogenase-like hydrolase PCI15_RS05625 PF03989 DNA gyrase C-terminal domain, beta-propeller PCI15_RS05625 PF00521 DNA gyrase/topoisomerase IV, subunit A PCI15_RS05630 PF00266 Aminotransferase class-V PCI15_RS05635 PF01817 Chorismate mutase type II PCI15_RS05635 PF00800 Prephenate dehydratase PCI15_RS05635 PF01842 ACT domain PCI15_RS05640 PF00155 Aminotransferase class I and II PCI15_RS05645 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PCI15_RS05650 PF02224 Cytidylate kinase PCI15_RS05655 PF00575 S1 RNA binding domain PCI15_RS05660 PF00216 Bacterial DNA-binding protein PCI15_RS05670 PF18073 Rubredoxin metal binding domain PCI15_RS05675 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PCI15_RS05690 PF05114 Protein of unknown function (DUF692) PCI15_RS05710 PF01980 tRNA-methyltransferase O PCI15_RS05710 PF18389 TrmO C-terminal domain PCI15_RS05715 PF00156 Phosphoribosyl transferase domain PCI15_RS05720 PF06968 Biotin and Thiamin Synthesis associated domain PCI15_RS05720 PF04055 Radical SAM superfamily PCI15_RS05725 PF00155 Aminotransferase class I and II PCI15_RS05730 PF00561 alpha/beta hydrolase fold PCI15_RS05735 PF08241 Methyltransferase domain PCI15_RS05755 PF12697 Alpha/beta hydrolase family PCI15_RS05760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS05760 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PCI15_RS05765 PF13742 OB-fold nucleic acid binding domain PCI15_RS05765 PF02601 Exonuclease VII, large subunit PCI15_RS05770 PF00478 IMP dehydrogenase / GMP reductase domain PCI15_RS05770 PF00571 CBS domain PCI15_RS05775 PF02540 NAD synthase PCI15_RS05775 PF00958 GMP synthase C terminal domain PCI15_RS05775 PF00117 Glutamine amidotransferase class-I PCI15_RS05780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PCI15_RS05790 PF01464 Transglycosylase SLT domain PCI15_RS05790 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS05795 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PCI15_RS05795 PF02769 AIR synthase related protein, C-terminal domain PCI15_RS05795 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal PCI15_RS05805 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PCI15_RS05805 PF02843 Phosphoribosylglycinamide synthetase, C domain PCI15_RS05805 PF02844 Phosphoribosylglycinamide synthetase, N domain PCI15_RS05810 PF01808 AICARFT/IMPCHase bienzyme PCI15_RS05810 PF02142 MGS-like domain PCI15_RS05815 PF02954 Bacterial regulatory protein, Fis family PCI15_RS05820 PF01207 Dihydrouridine synthase (Dus) PCI15_RS05835 PF02785 Biotin carboxylase C-terminal domain PCI15_RS05835 PF00289 Biotin carboxylase, N-terminal domain PCI15_RS05835 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PCI15_RS05840 PF00364 Biotin-requiring enzyme PCI15_RS05845 PF01220 Dehydroquinase class II PCI15_RS05860 PF00860 Permease family PCI15_RS05865 PF01625 Peptide methionine sulfoxide reductase PCI15_RS05870 PF02637 GatB domain PCI15_RS05870 PF02934 GatB/GatE catalytic domain PCI15_RS05875 PF01425 Amidase PCI15_RS05880 PF02686 Glu-tRNAGln amidotransferase C subunit PCI15_RS05890 PF04085 rod shape-determining protein MreC PCI15_RS05895 PF04093 rod shape-determining protein MreD PCI15_RS05900 PF02545 Maf-like protein PCI15_RS05905 PF10150 Ribonuclease E/G family PCI15_RS05905 PF00575 S1 RNA binding domain PCI15_RS05915 PF04751 Protein of unknown function (DUF615) PCI15_RS05920 PF03448 MgtE intracellular N domain PCI15_RS05920 PF01769 Divalent cation transporter PCI15_RS05920 PF00571 CBS domain PCI15_RS05925 PF00381 PTS HPr component phosphorylation site PCI15_RS05930 PF03668 P-loop ATPase protein family PCI15_RS05935 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PCI15_RS05940 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PCI15_RS05945 PF04963 Sigma-54 factor, core binding domain PCI15_RS05945 PF00309 Sigma-54 factor, Activator interacting domain (AID) PCI15_RS05945 PF04552 Sigma-54, DNA binding domain PCI15_RS05950 PF00005 ABC transporter PCI15_RS05950 PF12399 Branched-chain amino acid ATP-binding cassette transporter PCI15_RS05970 PF01380 SIS domain PCI15_RS05970 PF00571 CBS domain PCI15_RS05975 PF01699 Sodium/calcium exchanger protein PCI15_RS05980 PF00005 ABC transporter PCI15_RS05985 PF02405 Permease MlaE PCI15_RS05990 PF02470 MlaD protein PCI15_RS06005 PF01722 BolA-like protein PCI15_RS06010 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PCI15_RS06015 PF01634 ATP phosphoribosyltransferase PCI15_RS06020 PF00815 Histidinol dehydrogenase PCI15_RS06025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PCI15_RS06035 PF04186 FxsA cytoplasmic membrane protein PCI15_RS06040 PF00166 Chaperonin 10 Kd subunit PCI15_RS06045 PF00118 TCP-1/cpn60 chaperonin family PCI15_RS06080 PF02382 N-terminal domain in RTX protein PCI15_RS06080 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PCI15_RS06080 PF03497 Anthrax toxin LF subunit PCI15_RS06090 PF04101 Glycosyltransferase family 28 C-terminal domain PCI15_RS06095 PF01197 Ribosomal protein L31 PCI15_RS06100 PF00444 Ribosomal protein L36 PCI15_RS06110 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PCI15_RS06110 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PCI15_RS06115 PF05853 beta-keto acid cleavage enzyme PCI15_RS06120 PF01965 DJ-1/PfpI family PCI15_RS06120 PF12833 Helix-turn-helix domain PCI15_RS06125 PF00884 Sulfatase PCI15_RS06125 PF08019 Phosphoethanolamine transferase EptA/EptB PCI15_RS06130 PF01219 Prokaryotic diacylglycerol kinase PCI15_RS06135 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PCI15_RS06135 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PCI15_RS06140 PF01261 Xylose isomerase-like TIM barrel PCI15_RS06145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PCI15_RS06145 PF00205 Thiamine pyrophosphate enzyme, central domain PCI15_RS06145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PCI15_RS06150 PF00294 pfkB family carbohydrate kinase PCI15_RS06155 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PCI15_RS06155 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PCI15_RS06160 PF00005 ABC transporter PCI15_RS06165 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS06180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PCI15_RS06180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PCI15_RS06185 PF04962 KduI/IolB family PCI15_RS06190 PF04193 PQ loop repeat PCI15_RS06195 PF00009 Elongation factor Tu GTP binding domain PCI15_RS06200 PF01507 Phosphoadenosine phosphosulfate reductase family PCI15_RS06205 PF01925 Sulfite exporter TauE/SafE PCI15_RS06210 PF01507 Phosphoadenosine phosphosulfate reductase family PCI15_RS06215 PF00892 EamA-like transporter family PCI15_RS06220 PF07670 Nucleoside recognition PCI15_RS06225 PF01037 Lrp/AsnC ligand binding domain PCI15_RS06230 PF01964 Radical SAM ThiC family PCI15_RS06230 PF13667 ThiC-associated domain PCI15_RS06240 PF00753 Metallo-beta-lactamase superfamily PCI15_RS06250 PF03969 AFG1-like ATPase PCI15_RS06260 PF00365 Phosphofructokinase PCI15_RS06265 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) PCI15_RS06295 PF00909 Ammonium Transporter Family PCI15_RS06305 PF03942 DTW domain PCI15_RS06325 PF09330 D-lactate dehydrogenase, membrane binding PCI15_RS06325 PF01565 FAD binding domain PCI15_RS06330 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS06340 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS06345 PF07729 FCD domain PCI15_RS06345 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS06350 PF17831 Pyruvate dehydrogenase E1 component middle domain PCI15_RS06350 PF00456 Transketolase, thiamine diphosphate binding domain PCI15_RS06355 PF02817 e3 binding domain PCI15_RS06355 PF00364 Biotin-requiring enzyme PCI15_RS06355 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PCI15_RS06360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PCI15_RS06360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PCI15_RS06360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PCI15_RS06360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PCI15_RS06370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PCI15_RS06370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PCI15_RS06370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PCI15_RS06375 PF00342 Phosphoglucose isomerase PCI15_RS06380 PF00483 Nucleotidyl transferase PCI15_RS06390 PF00994 Probable molybdopterin binding domain PCI15_RS06395 PF03453 MoeA N-terminal region (domain I and II) PCI15_RS06395 PF00994 Probable molybdopterin binding domain PCI15_RS06395 PF03454 MoeA C-terminal region (domain IV) PCI15_RS06405 PF12804 MobA-like NTP transferase domain PCI15_RS06410 PF03969 AFG1-like ATPase PCI15_RS06415 PF00572 Ribosomal protein L13 PCI15_RS06420 PF00380 Ribosomal protein S9/S16 PCI15_RS06425 PF00355 Rieske [2Fe-2S] domain PCI15_RS06425 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal PCI15_RS06430 PF00032 Cytochrome b(C-terminal)/b6/petD PCI15_RS06430 PF00033 Cytochrome b/b6/petB PCI15_RS06435 PF02167 Cytochrome C1 family PCI15_RS06440 PF00043 Glutathione S-transferase, C-terminal domain PCI15_RS06440 PF02798 Glutathione S-transferase, N-terminal domain PCI15_RS06445 PF04386 Stringent starvation protein B PCI15_RS06450 PF04972 BON domain PCI15_RS06455 PF13580 SIS domain PCI15_RS06460 PF02021 Uncharacterised protein family UPF0102 PCI15_RS06465 PF04348 LppC putative lipoprotein PCI15_RS06470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PCI15_RS06480 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS06485 PF12169 DNA polymerase III subunits gamma and tau domain III PCI15_RS06485 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding PCI15_RS06485 PF12170 DNA polymerase III tau subunit V interacting with alpha PCI15_RS06490 PF02575 YbaB/EbfC DNA-binding family PCI15_RS06495 PF13662 Toprim domain PCI15_RS06495 PF02132 RecR protein PCI15_RS06500 PF00570 HRDC domain PCI15_RS06500 PF01612 3'-5' exonuclease PCI15_RS06505 PF05166 YcgL domain PCI15_RS06510 PF03692 Putative zinc- or iron-chelating domain PCI15_RS06515 PF02872 5'-nucleotidase, C-terminal domain PCI15_RS06515 PF00149 Calcineurin-like phosphoesterase PCI15_RS06530 PF02381 MraZ protein, putative antitoxin-like PCI15_RS06535 PF01795 MraW methylase family PCI15_RS06545 PF00905 Penicillin binding protein transpeptidase domain PCI15_RS06545 PF03717 Penicillin-binding Protein dimerisation domain PCI15_RS06550 PF01225 Mur ligase family, catalytic domain PCI15_RS06550 PF02875 Mur ligase family, glutamate ligase domain PCI15_RS06550 PF08245 Mur ligase middle domain PCI15_RS06555 PF01225 Mur ligase family, catalytic domain PCI15_RS06555 PF02875 Mur ligase family, glutamate ligase domain PCI15_RS06555 PF08245 Mur ligase middle domain PCI15_RS06560 PF00953 Glycosyl transferase family 4 PCI15_RS06560 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PCI15_RS06565 PF08245 Mur ligase middle domain PCI15_RS06565 PF02875 Mur ligase family, glutamate ligase domain PCI15_RS06570 PF01098 Cell cycle protein PCI15_RS06575 PF04101 Glycosyltransferase family 28 C-terminal domain PCI15_RS06575 PF03033 Glycosyltransferase family 28 N-terminal domain PCI15_RS06580 PF02875 Mur ligase family, glutamate ligase domain PCI15_RS06580 PF01225 Mur ligase family, catalytic domain PCI15_RS06580 PF08245 Mur ligase middle domain PCI15_RS06585 PF01820 D-ala D-ala ligase N-terminus PCI15_RS06585 PF07478 D-ala D-ala ligase C-terminus PCI15_RS06590 PF03799 Cell division protein FtsQ PCI15_RS06590 PF08478 POTRA domain, FtsQ-type PCI15_RS06595 PF02491 SHS2 domain inserted in FTSA PCI15_RS06600 PF12327 FtsZ family, C-terminal domain PCI15_RS06600 PF00091 Tubulin/FtsZ family, GTPase domain PCI15_RS06605 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase PCI15_RS06610 PF02810 SEC-C motif PCI15_RS06610 PF01043 SecA preprotein cross-linking domain PCI15_RS06610 PF07517 SecA DEAD-like domain PCI15_RS06610 PF07516 SecA Wing and Scaffold domain PCI15_RS06615 PF01960 ArgJ family PCI15_RS06620 PF02581 Thiamine monophosphate synthase PCI15_RS06625 PF03884 DNA gyrase inhibitor YacG PCI15_RS06630 PF01121 Dephospho-CoA kinase PCI15_RS06635 PF01478 Type IV leader peptidase family PCI15_RS06635 PF06750 Bacterial Peptidase A24 N-terminal domain PCI15_RS06640 PF00482 Type II secretion system (T2SS), protein F PCI15_RS06645 PF00437 Type II/IV secretion system protein PCI15_RS06645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PCI15_RS06650 PF00114 Pilin (bacterial filament) PCI15_RS06650 PF07963 Prokaryotic N-terminal methylation motif PCI15_RS06655 PF00114 Pilin (bacterial filament) PCI15_RS06655 PF07963 Prokaryotic N-terminal methylation motif PCI15_RS06665 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PCI15_RS06665 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PCI15_RS06670 PF01510 N-acetylmuramoyl-L-alanine amidase PCI15_RS06675 PF00005 ABC transporter PCI15_RS06675 PF08402 TOBE domain PCI15_RS06680 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS06685 PF13416 Bacterial extracellular solute-binding protein PCI15_RS06705 PF01554 MatE PCI15_RS06710 PF00106 short chain dehydrogenase PCI15_RS06720 PF02810 SEC-C motif PCI15_RS06725 PF00929 Exonuclease PCI15_RS06725 PF08411 Exonuclease C-terminal PCI15_RS06735 PF16187 Middle or third domain of peptidase_M16 PCI15_RS06735 PF00675 Insulinase (Peptidase family M16) PCI15_RS06735 PF05193 Peptidase M16 inactive domain PCI15_RS06755 PF03883 Peroxide stress protein YaaA PCI15_RS06770 PF00579 tRNA synthetases class I (W and Y) PCI15_RS06775 PF00581 Rhodanese-like domain PCI15_RS06780 PF04261 Dyp-type peroxidase family PCI15_RS06785 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS06785 PF13185 GAF domain PCI15_RS06790 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS06810 PF00793 DAHP synthetase I family PCI15_RS06815 PF01243 Pyridoxamine 5'-phosphate oxidase PCI15_RS06845 PF03477 ATP cone domain PCI15_RS06845 PF00317 Ribonucleotide reductase, all-alpha domain PCI15_RS06845 PF02867 Ribonucleotide reductase, barrel domain PCI15_RS06850 PF00268 Ribonucleotide reductase, small chain PCI15_RS06855 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS06860 PF00633 Helix-hairpin-helix motif PCI15_RS06860 PF10576 Iron-sulfur binding domain of endonuclease III PCI15_RS06860 PF00730 HhH-GPD superfamily base excision DNA repair protein PCI15_RS06865 PF02508 Rnf-Nqr subunit, membrane protein PCI15_RS06870 PF04205 FMN-binding domain PCI15_RS06875 PF03116 NQR2, RnfD, RnfE family PCI15_RS06880 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PCI15_RS06880 PF12838 4Fe-4S dicluster domain PCI15_RS06880 PF13375 RnfC Barrel sandwich hybrid domain PCI15_RS06880 PF10531 SLBB domain PCI15_RS06885 PF04060 Putative Fe-S cluster PCI15_RS06890 PF02508 Rnf-Nqr subunit, membrane protein PCI15_RS06895 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PCI15_RS06895 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PCI15_RS06905 PF10414 Sirohaem synthase dimerisation region PCI15_RS06905 PF14824 Sirohaem biosynthesis protein central PCI15_RS06905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PCI15_RS06910 PF00561 alpha/beta hydrolase fold PCI15_RS06910 PF08386 TAP-like protein PCI15_RS06915 PF01541 GIY-YIG catalytic domain PCI15_RS06925 PF13746 4Fe-4S dicluster domain PCI15_RS06925 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PCI15_RS06925 PF12801 4Fe-4S binding domain PCI15_RS06930 PF00155 Aminotransferase class I and II PCI15_RS06930 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS06935 PF01979 Amidohydrolase family PCI15_RS06940 PF17763 Glutaminase/Asparaginase C-terminal domain PCI15_RS06940 PF00710 Asparaginase, N-terminal PCI15_RS06945 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS06955 PF00472 RF-1 domain PCI15_RS06965 PF00005 ABC transporter PCI15_RS06980 PF00768 D-alanyl-D-alanine carboxypeptidase PCI15_RS06990 PF00155 Aminotransferase class I and II PCI15_RS06995 PF00795 Carbon-nitrogen hydrolase PCI15_RS07015 PF00270 DEAD/DEAH box helicase PCI15_RS07015 PF04408 Helicase associated domain (HA2) PCI15_RS07015 PF00271 Helicase conserved C-terminal domain PCI15_RS07015 PF08482 ATP-dependent helicase C-terminal PCI15_RS07025 PF01266 FAD dependent oxidoreductase PCI15_RS07030 PF01810 LysE type translocator PCI15_RS07045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS07045 PF03466 LysR substrate binding domain PCI15_RS07050 PF00171 Aldehyde dehydrogenase family PCI15_RS07055 PF00202 Aminotransferase class-III PCI15_RS07070 PF00892 EamA-like transporter family PCI15_RS07075 PF12320 Type 5 capsule protein repressor C-terminal domain PCI15_RS07075 PF00149 Calcineurin-like phosphoesterase PCI15_RS07080 PF13476 AAA domain PCI15_RS07115 PF03497 Anthrax toxin LF subunit PCI15_RS07115 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PCI15_RS07115 PF02382 N-terminal domain in RTX protein PCI15_RS07145 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS07145 PF00155 Aminotransferase class I and II PCI15_RS07150 PF17863 AAA lid domain PCI15_RS07150 PF07726 ATPase family associated with various cellular activities (AAA) PCI15_RS07155 PF01882 Protein of unknown function DUF58 PCI15_RS07165 PF00092 von Willebrand factor type A domain PCI15_RS07165 PF07584 Aerotolerance regulator N-terminal PCI15_RS07170 PF07584 Aerotolerance regulator N-terminal PCI15_RS07170 PF00092 von Willebrand factor type A domain PCI15_RS07180 PF00881 Nitroreductase family PCI15_RS07185 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS07190 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PCI15_RS07190 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PCI15_RS07190 PF02770 Acyl-CoA dehydrogenase, middle domain PCI15_RS07195 PF02515 CoA-transferase family III PCI15_RS07200 PF00171 Aldehyde dehydrogenase family PCI15_RS07220 PF00149 Calcineurin-like phosphoesterase PCI15_RS07225 PF07883 Cupin domain PCI15_RS07235 PF13416 Bacterial extracellular solute-binding protein PCI15_RS07240 PF00120 Glutamine synthetase, catalytic domain PCI15_RS07245 PF01266 FAD dependent oxidoreductase PCI15_RS07250 PF13977 BetI-type transcriptional repressor, C-terminal PCI15_RS07250 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS07265 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS07265 PF08448 PAS fold PCI15_RS07270 PF00394 Multicopper oxidase PCI15_RS07270 PF07731 Multicopper oxidase PCI15_RS07270 PF07732 Multicopper oxidase PCI15_RS07295 PF00881 Nitroreductase family PCI15_RS07300 PF00892 EamA-like transporter family PCI15_RS07305 PF01047 MarR family PCI15_RS07320 PF01810 LysE type translocator PCI15_RS07325 PF05726 Pirin C-terminal cupin domain PCI15_RS07325 PF02678 Pirin PCI15_RS07330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS07330 PF03466 LysR substrate binding domain PCI15_RS07335 PF13409 Glutathione S-transferase, N-terminal domain PCI15_RS07340 PF00570 HRDC domain PCI15_RS07340 PF16124 RecQ zinc-binding PCI15_RS07340 PF09382 RQC domain PCI15_RS07340 PF00270 DEAD/DEAH box helicase PCI15_RS07340 PF00271 Helicase conserved C-terminal domain PCI15_RS07345 PF01063 Amino-transferase class IV PCI15_RS07350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS07350 PF03466 LysR substrate binding domain PCI15_RS07355 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PCI15_RS07355 PF06155 Protein of unknown function (DUF971) PCI15_RS07360 PF13977 BetI-type transcriptional repressor, C-terminal PCI15_RS07360 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS07390 PF00672 HAMP domain PCI15_RS07390 PF02743 Cache domain PCI15_RS07390 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS07395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PCI15_RS07410 PF02626 Carboxyltransferase domain, subdomain A and B PCI15_RS07415 PF02682 Carboxyltransferase domain, subdomain C and D PCI15_RS07420 PF03746 LamB/YcsF family PCI15_RS07425 PF07286 Protein of unknown function (DUF1445) PCI15_RS07450 PF02634 FdhD/NarQ family PCI15_RS07455 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PCI15_RS07455 PF01568 Molydopterin dinucleotide binding domain PCI15_RS07455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PCI15_RS07455 PF00384 Molybdopterin oxidoreductase PCI15_RS07455 PF00037 4Fe-4S binding domain PCI15_RS07460 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PCI15_RS07460 PF00037 4Fe-4S binding domain PCI15_RS07460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PCI15_RS07480 PF01418 Helix-turn-helix domain, rpiR family PCI15_RS07480 PF01380 SIS domain PCI15_RS07485 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS07495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS07505 PF00120 Glutamine synthetase, catalytic domain PCI15_RS07505 PF03951 Glutamine synthetase, beta-Grasp domain PCI15_RS07510 PF00171 Aldehyde dehydrogenase family PCI15_RS07515 PF00732 GMC oxidoreductase PCI15_RS07515 PF05199 GMC oxidoreductase PCI15_RS07520 PF01381 Helix-turn-helix PCI15_RS07530 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS07530 PF00563 EAL domain PCI15_RS07530 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS07540 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PCI15_RS07560 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS07565 PF13419 Haloacid dehalogenase-like hydrolase PCI15_RS07570 PF01235 Sodium:alanine symporter family PCI15_RS07590 PF00175 Oxidoreductase NAD-binding domain PCI15_RS07590 PF00970 Oxidoreductase FAD-binding domain PCI15_RS07595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS07595 PF03466 LysR substrate binding domain PCI15_RS07600 PF00581 Rhodanese-like domain PCI15_RS07600 PF17773 UPF0176 acylphosphatase like domain PCI15_RS07605 PF00360 Phytochrome region PCI15_RS07605 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS07605 PF01590 GAF domain PCI15_RS07605 PF00563 EAL domain PCI15_RS07615 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS07625 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS07625 PF00107 Zinc-binding dehydrogenase PCI15_RS07630 PF03466 LysR substrate binding domain PCI15_RS07630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS07635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS07635 PF03466 LysR substrate binding domain PCI15_RS07695 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS07695 PF00563 EAL domain PCI15_RS07695 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS07710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PCI15_RS07715 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS07720 PF12911 N-terminal TM domain of oligopeptide transport permease C PCI15_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS07725 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PCI15_RS07725 PF00005 ABC transporter PCI15_RS07730 PF01979 Amidohydrolase family PCI15_RS07735 PF07683 Cobalamin synthesis protein cobW C-terminal domain PCI15_RS07735 PF02492 CobW/HypB/UreG, nucleotide-binding domain PCI15_RS07740 PF01063 Amino-transferase class IV PCI15_RS07765 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS07800 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS07800 PF00563 EAL domain PCI15_RS07805 PF13416 Bacterial extracellular solute-binding protein PCI15_RS07810 PF04486 SchA/CurD like domain PCI15_RS07810 PF03992 Antibiotic biosynthesis monooxygenase PCI15_RS07825 PF01757 Acyltransferase family PCI15_RS07850 PF00491 Arginase family PCI15_RS07855 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PCI15_RS07860 PF03435 Saccharopine dehydrogenase NADP binding domain PCI15_RS07860 PF16653 Saccharopine dehydrogenase C-terminal domain PCI15_RS07865 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PCI15_RS07865 PF17944 Arginine decarboxylase C-terminal helical extension PCI15_RS07865 PF17810 Arginine decarboxylase helical bundle domain PCI15_RS07870 PF05643 Putative bacterial lipoprotein (DUF799) PCI15_RS07880 PF03783 Curli production assembly/transport component CsgG PCI15_RS07885 PF00202 Aminotransferase class-III PCI15_RS07890 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS07890 PF00155 Aminotransferase class I and II PCI15_RS07895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PCI15_RS07895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PCI15_RS07900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PCI15_RS07900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PCI15_RS07900 PF00205 Thiamine pyrophosphate enzyme, central domain PCI15_RS07905 PF01515 Phosphate acetyl/butaryl transferase PCI15_RS07915 PF00072 Response regulator receiver domain PCI15_RS07915 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS07925 PF00923 Transaldolase/Fructose-6-phosphate aldolase PCI15_RS07930 PF01207 Dihydrouridine synthase (Dus) PCI15_RS07935 PF00589 Phage integrase family PCI15_RS08045 PF02831 gpW PCI15_RS08065 PF03864 Phage major capsid protein E PCI15_RS08140 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system PCI15_RS08145 PF07927 HicA toxin of bacterial toxin-antitoxin, PCI15_RS08165 PF04226 Transglycosylase associated protein PCI15_RS08185 PF01219 Prokaryotic diacylglycerol kinase PCI15_RS08195 PF00749 tRNA synthetases class I (E and Q), catalytic domain PCI15_RS08205 PF03009 Glycerophosphoryl diester phosphodiesterase family PCI15_RS08225 PF12833 Helix-turn-helix domain PCI15_RS08240 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS08255 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS08255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS08255 PF01627 Hpt domain PCI15_RS08255 PF00072 Response regulator receiver domain PCI15_RS08255 PF00672 HAMP domain PCI15_RS08255 PF17149 Periplasmic sensor domain found in signal transduction proteins PCI15_RS08265 PF00072 Response regulator receiver domain PCI15_RS08265 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS08270 PF00491 Arginase family PCI15_RS08275 PF00290 Tryptophan synthase alpha chain PCI15_RS08280 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS08285 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS08295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PCI15_RS08300 PF00557 Metallopeptidase family M24 PCI15_RS08310 PF00664 ABC transporter transmembrane region PCI15_RS08310 PF03412 Peptidase C39 family PCI15_RS08310 PF00005 ABC transporter PCI15_RS08325 PF01171 PP-loop family PCI15_RS08330 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 PCI15_RS08365 PF02872 5'-nucleotidase, C-terminal domain PCI15_RS08365 PF00149 Calcineurin-like phosphoesterase PCI15_RS08375 PF04315 Elongation factor P hydroxylase PCI15_RS08385 PF02630 SCO1/SenC PCI15_RS08395 PF01966 HD domain PCI15_RS08400 PF01253 Translation initiation factor SUI1 PCI15_RS08415 PF00127 Copper binding proteins, plastocyanin/azurin family PCI15_RS08430 PF01636 Phosphotransferase enzyme family PCI15_RS08435 PF01928 CYTH domain PCI15_RS08440 PF09334 tRNA synthetases class I (M) PCI15_RS08440 PF01588 Putative tRNA binding domain PCI15_RS08445 PF05958 tRNA (Uracil-5-)-methyltransferase PCI15_RS08455 PF00501 AMP-binding enzyme PCI15_RS08455 PF01553 Acyltransferase PCI15_RS08470 PF01569 PAP2 superfamily PCI15_RS08475 PF04381 Putative exonuclease, RdgC PCI15_RS08485 PF00156 Phosphoribosyl transferase domain PCI15_RS08490 PF13545 Crp-like helix-turn-helix domain PCI15_RS08490 PF00027 Cyclic nucleotide-binding domain PCI15_RS08495 PF04055 Radical SAM superfamily PCI15_RS08495 PF06969 HemN C-terminal domain PCI15_RS08510 PF00403 Heavy-metal-associated domain PCI15_RS08520 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase PCI15_RS08520 PF12801 4Fe-4S binding domain PCI15_RS08520 PF13746 4Fe-4S dicluster domain PCI15_RS08525 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP PCI15_RS08525 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PCI15_RS08540 PF00115 Cytochrome C and Quinol oxidase polypeptide I PCI15_RS08550 PF01728 FtsJ-like methyltransferase PCI15_RS08550 PF18125 RlmM ferredoxin-like domain PCI15_RS08560 PF01206 Sulfurtransferase TusA PCI15_RS08570 PF00563 EAL domain PCI15_RS08570 PF08495 FIST N domain PCI15_RS08570 PF10442 FIST C domain PCI15_RS08570 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS08585 PF01554 MatE PCI15_RS08590 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus PCI15_RS08600 PF01026 TatD related DNase PCI15_RS08605 PF01464 Transglycosylase SLT domain PCI15_RS08605 PF14718 Soluble lytic murein transglycosylase L domain PCI15_RS08610 PF12848 ABC transporter PCI15_RS08610 PF00005 ABC transporter PCI15_RS08610 PF16326 ABC transporter C-terminal domain PCI15_RS08615 PF00582 Universal stress protein family PCI15_RS08635 PF01751 Toprim domain PCI15_RS08635 PF01396 Topoisomerase DNA binding C4 zinc finger PCI15_RS08635 PF08272 Topoisomerase I zinc-ribbon-like PCI15_RS08635 PF01131 DNA topoisomerase PCI15_RS08650 PF03846 Cell division inhibitor SulA PCI15_RS08655 PF01726 LexA DNA binding domain PCI15_RS08655 PF00717 Peptidase S24-like PCI15_RS08660 PF13307 Helicase C-terminal domain PCI15_RS08660 PF06733 DEAD_2 PCI15_RS08665 PF00270 DEAD/DEAH box helicase PCI15_RS08665 PF00271 Helicase conserved C-terminal domain PCI15_RS08675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PCI15_RS08675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PCI15_RS08690 PF12697 Alpha/beta hydrolase family PCI15_RS08700 PF01227 GTP cyclohydrolase I PCI15_RS08710 PF05175 Methyltransferase small domain PCI15_RS08715 PF01264 Chorismate synthase PCI15_RS08720 PF12832 MFS_1 like family PCI15_RS08730 PF07879 PHB/PHA accumulation regulator DNA-binding domain PCI15_RS08730 PF05233 PHB accumulation regulatory domain PCI15_RS08740 PF01464 Transglycosylase SLT domain PCI15_RS08740 PF01476 LysM domain PCI15_RS08745 PF00753 Metallo-beta-lactamase superfamily PCI15_RS08745 PF16123 Hydroxyacylglutathione hydrolase C-terminus PCI15_RS08750 PF03150 Di-haem cytochrome c peroxidase PCI15_RS08750 PF00034 Cytochrome c PCI15_RS08765 PF13426 PAS domain PCI15_RS08765 PF00072 Response regulator receiver domain PCI15_RS08765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS08770 PF00072 Response regulator receiver domain PCI15_RS08770 PF00158 Sigma-54 interaction domain PCI15_RS08770 PF02954 Bacterial regulatory protein, Fis family PCI15_RS08775 PF00072 Response regulator receiver domain PCI15_RS08780 PF01209 ubiE/COQ5 methyltransferase family PCI15_RS08785 PF00075 RNase H PCI15_RS08790 PF00929 Exonuclease PCI15_RS08800 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain PCI15_RS08800 PF00293 NUDIX domain PCI15_RS08800 PF09297 NADH pyrophosphatase zinc ribbon domain PCI15_RS08810 PF08496 Peptidase family S49 N-terminal PCI15_RS08810 PF01343 Peptidase family S49 PCI15_RS08825 PF00933 Glycosyl hydrolase family 3 N terminal domain PCI15_RS08830 PF00924 Mechanosensitive ion channel PCI15_RS08845 PF12833 Helix-turn-helix domain PCI15_RS08860 PF02559 CarD-like/TRCF domain PCI15_RS08860 PF00270 DEAD/DEAH box helicase PCI15_RS08860 PF00271 Helicase conserved C-terminal domain PCI15_RS08860 PF03461 TRCF domain PCI15_RS08860 PF17757 UvrB interaction domain PCI15_RS08865 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PCI15_RS08865 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PCI15_RS08870 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) PCI15_RS08870 PF11973 NQRA C-terminal domain PCI15_RS08875 PF03116 NQR2, RnfD, RnfE family PCI15_RS08880 PF04205 FMN-binding domain PCI15_RS08885 PF02508 Rnf-Nqr subunit, membrane protein PCI15_RS08890 PF02508 Rnf-Nqr subunit, membrane protein PCI15_RS08895 PF00970 Oxidoreductase FAD-binding domain PCI15_RS08895 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS08895 PF00175 Oxidoreductase NAD-binding domain PCI15_RS08900 PF02424 ApbE family PCI15_RS08910 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS08910 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PCI15_RS08930 PF12704 MacB-like periplasmic core domain PCI15_RS08930 PF02687 FtsX-like permease family PCI15_RS08935 PF00005 ABC transporter PCI15_RS08950 PF03772 Competence protein PCI15_RS08950 PF13567 Domain of unknown function (DUF4131) PCI15_RS08950 PF00753 Metallo-beta-lactamase superfamily PCI15_RS08955 PF01618 MotA/TolQ/ExbB proton channel family PCI15_RS08960 PF02472 Biopolymer transport protein ExbD/TolR PCI15_RS08965 PF02606 Tetraacyldisaccharide-1-P 4'-kinase PCI15_RS08970 PF03966 Trm112p-like protein PCI15_RS08975 PF02348 Cytidylyltransferase PCI15_RS08980 PF06906 Protein of unknown function (DUF1272) PCI15_RS08985 PF01451 Low molecular weight phosphotyrosine protein phosphatase PCI15_RS08990 PF01565 FAD binding domain PCI15_RS08990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PCI15_RS08995 PF12111 Polyribonucleotide phosphorylase C terminal PCI15_RS08995 PF10150 Ribonuclease E/G family PCI15_RS08995 PF00575 S1 RNA binding domain PCI15_RS09000 PF01479 S4 domain PCI15_RS09000 PF00849 RNA pseudouridylate synthase PCI15_RS09010 PF03466 LysR substrate binding domain PCI15_RS09010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09020 PF03061 Thioesterase superfamily PCI15_RS09025 PF04715 Anthranilate synthase component I, N terminal region PCI15_RS09025 PF00425 chorismate binding enzyme PCI15_RS09030 PF00561 alpha/beta hydrolase fold PCI15_RS09035 PF07729 FCD domain PCI15_RS09035 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS09045 PF00285 Citrate synthase, C-terminal domain PCI15_RS09050 PF00330 Aconitase family (aconitate hydratase) PCI15_RS09050 PF00694 Aconitase C-terminal domain PCI15_RS09055 PF04303 PrpF protein PCI15_RS09060 PF04204 Homoserine O-succinyltransferase PCI15_RS09080 PF00561 alpha/beta hydrolase fold PCI15_RS09090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09095 PF00330 Aconitase family (aconitate hydratase) PCI15_RS09100 PF00694 Aconitase C-terminal domain PCI15_RS09105 PF00180 Isocitrate/isopropylmalate dehydrogenase PCI15_RS09110 PF01118 Semialdehyde dehydrogenase, NAD binding domain PCI15_RS09110 PF02774 Semialdehyde dehydrogenase, dimerisation domain PCI15_RS09120 PF01037 Lrp/AsnC ligand binding domain PCI15_RS09125 PF05088 Bacterial NAD-glutamate dehydrogenase PCI15_RS09130 PF00474 Sodium:solute symporter family PCI15_RS09135 PF14850 DNA-binding domain of Proline dehydrogenase PCI15_RS09135 PF01619 Proline dehydrogenase PCI15_RS09135 PF00171 Aldehyde dehydrogenase family PCI15_RS09135 PF18327 Proline utilization A proline dehydrogenase N-terminal domain PCI15_RS09145 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS09145 PF07729 FCD domain PCI15_RS09150 PF08943 CsiD PCI15_RS09155 PF01266 FAD dependent oxidoreductase PCI15_RS09175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS09175 PF00672 HAMP domain PCI15_RS09175 PF17200 Single Cache domain 2 PCI15_RS09180 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS09180 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS09180 PF00563 EAL domain PCI15_RS09185 PF00270 DEAD/DEAH box helicase PCI15_RS09185 PF03880 DbpA RNA binding domain PCI15_RS09185 PF12343 Cold shock protein DEAD box A PCI15_RS09185 PF00271 Helicase conserved C-terminal domain PCI15_RS09190 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PCI15_RS09205 PF00551 Formyl transferase PCI15_RS09210 PF00586 AIR synthase related protein, N-terminal domain PCI15_RS09210 PF02769 AIR synthase related protein, C-terminal domain PCI15_RS09220 PF01594 AI-2E family transporter PCI15_RS09225 PF00308 Bacterial dnaA protein PCI15_RS09235 PF00849 RNA pseudouridylate synthase PCI15_RS09245 PF00899 ThiF family PCI15_RS09250 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS09255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09255 PF03466 LysR substrate binding domain PCI15_RS09265 PF00266 Aminotransferase class-V PCI15_RS09275 PF03358 NADPH-dependent FMN reductase PCI15_RS09280 PF03960 ArsC family PCI15_RS09285 PF03631 Virulence factor BrkB PCI15_RS09295 PF00962 Adenosine/AMP deaminase PCI15_RS09300 PF03171 2OG-Fe(II) oxygenase superfamily PCI15_RS09300 PF14226 non-haem dioxygenase in morphine synthesis N-terminal PCI15_RS09305 PF02608 ABC transporter substrate-binding protein PnrA-like PCI15_RS09310 PF00156 Phosphoribosyl transferase domain PCI15_RS09320 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS09325 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS09330 PF00005 ABC transporter PCI15_RS09340 PF03992 Antibiotic biosynthesis monooxygenase PCI15_RS09345 PF04073 Aminoacyl-tRNA editing domain PCI15_RS09345 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PCI15_RS09345 PF03129 Anticodon binding domain PCI15_RS09360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PCI15_RS09360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PCI15_RS09360 PF02770 Acyl-CoA dehydrogenase, middle domain PCI15_RS09365 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS09365 PF00501 AMP-binding enzyme PCI15_RS09380 PF00072 Response regulator receiver domain PCI15_RS09380 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS09385 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS09385 PF00989 PAS fold PCI15_RS09385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS09390 PF00501 AMP-binding enzyme PCI15_RS09390 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS09395 PF03625 Domain of unknown function DUF302 PCI15_RS09395 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PCI15_RS09400 PF01435 Peptidase family M48 PCI15_RS09405 PF01206 Sulfurtransferase TusA PCI15_RS09410 PF01594 AI-2E family transporter PCI15_RS09420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09420 PF03466 LysR substrate binding domain PCI15_RS09425 PF00578 AhpC/TSA family PCI15_RS09435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PCI15_RS09435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PCI15_RS09445 PF06062 Uncharacterised protein family (UPF0231) PCI15_RS09450 PF00849 RNA pseudouridylate synthase PCI15_RS09455 PF05958 tRNA (Uracil-5-)-methyltransferase PCI15_RS09460 PF02654 Cobalamin-5-phosphate synthase PCI15_RS09465 PF02885 Glycosyl transferase family, helical bundle domain PCI15_RS09465 PF00591 Glycosyl transferase family, a/b domain PCI15_RS09470 PF00999 Sodium/hydrogen exchanger family PCI15_RS09470 PF02254 TrkA-N domain PCI15_RS09475 PF01521 Iron-sulphur cluster biosynthesis PCI15_RS09475 PF01106 NifU-like domain PCI15_RS09480 PF02190 ATP-dependent protease La (LON) substrate-binding domain PCI15_RS09480 PF00004 ATPase family associated with various cellular activities (AAA) PCI15_RS09480 PF05362 Lon protease (S16) C-terminal proteolytic domain PCI15_RS09485 PF00216 Bacterial DNA-binding protein PCI15_RS09495 PF13145 PPIC-type PPIASE domain PCI15_RS09500 PF03466 LysR substrate binding domain PCI15_RS09500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09510 PF11791 Aconitate B N-terminal domain PCI15_RS09510 PF06434 Aconitate hydratase 2 N-terminus PCI15_RS09510 PF00330 Aconitase family (aconitate hydratase) PCI15_RS09515 PF01709 Transcriptional regulator PCI15_RS09525 PF01177 Asp/Glu/Hydantoin racemase PCI15_RS09575 PF03466 LysR substrate binding domain PCI15_RS09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09590 PF03334 Na+/H+ antiporter subunit PCI15_RS09600 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PCI15_RS09605 PF00361 Proton-conducting membrane transporter PCI15_RS09610 PF00361 Proton-conducting membrane transporter PCI15_RS09620 PF13244 Domain of unknown function (DUF4040) PCI15_RS09620 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter PCI15_RS09620 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PCI15_RS09620 PF00361 Proton-conducting membrane transporter PCI15_RS09625 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PCI15_RS09635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09635 PF03466 LysR substrate binding domain PCI15_RS09640 PF01546 Peptidase family M20/M25/M40 PCI15_RS09640 PF07687 Peptidase dimerisation domain PCI15_RS09645 PF06155 Protein of unknown function (DUF971) PCI15_RS09645 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PCI15_RS09650 PF01212 Beta-eliminating lyase PCI15_RS09655 PF13378 Enolase C-terminal domain-like PCI15_RS09655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS09670 PF01266 FAD dependent oxidoreductase PCI15_RS09675 PF03553 Na+/H+ antiporter family PCI15_RS09680 PF02423 Ornithine cyclodeaminase/mu-crystallin family PCI15_RS09705 PF02525 Flavodoxin-like fold PCI15_RS09715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09715 PF03466 LysR substrate binding domain PCI15_RS09730 PF00132 Bacterial transferase hexapeptide (six repeats) PCI15_RS09735 PF03129 Anticodon binding domain PCI15_RS09735 PF02824 TGS domain PCI15_RS09735 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PCI15_RS09735 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PCI15_RS09740 PF01979 Amidohydrolase family PCI15_RS09745 PF01226 Formate/nitrite transporter PCI15_RS09755 PF00360 Phytochrome region PCI15_RS09755 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS09755 PF01590 GAF domain PCI15_RS09755 PF00563 EAL domain PCI15_RS09760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09760 PF03466 LysR substrate binding domain PCI15_RS09765 PF14031 Putative serine dehydratase domain PCI15_RS09765 PF01168 Alanine racemase, N-terminal domain PCI15_RS09770 PF02423 Ornithine cyclodeaminase/mu-crystallin family PCI15_RS09785 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding PCI15_RS09785 PF18381 YcaO cyclodehydratase C-terminal domain PCI15_RS09790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09790 PF03466 LysR substrate binding domain PCI15_RS09805 PF00296 Luciferase-like monooxygenase PCI15_RS09810 PF03060 Nitronate monooxygenase PCI15_RS09830 PF03466 LysR substrate binding domain PCI15_RS09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09835 PF00012 Hsp70 protein PCI15_RS09840 PF01136 Peptidase family U32 PCI15_RS09845 PF01136 Peptidase family U32 PCI15_RS09850 PF02036 SCP-2 sterol transfer family PCI15_RS09890 PF04264 YceI-like domain PCI15_RS09900 PF00072 Response regulator receiver domain PCI15_RS09900 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS09905 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS09905 PF00672 HAMP domain PCI15_RS09910 PF00106 short chain dehydrogenase PCI15_RS09920 PF03466 LysR substrate binding domain PCI15_RS09920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS09930 PF00120 Glutamine synthetase, catalytic domain PCI15_RS09935 PF01266 FAD dependent oxidoreductase PCI15_RS09945 PF00248 Aldo/keto reductase family PCI15_RS09950 PF06719 AraC-type transcriptional regulator N-terminus PCI15_RS09950 PF12833 Helix-turn-helix domain PCI15_RS09955 PF01799 [2Fe-2S] binding domain PCI15_RS09955 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS09960 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PCI15_RS09975 PF00072 Response regulator receiver domain PCI15_RS09975 PF02954 Bacterial regulatory protein, Fis family PCI15_RS09975 PF00158 Sigma-54 interaction domain PCI15_RS09980 PF00563 EAL domain PCI15_RS09980 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS09980 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS09985 PF00072 Response regulator receiver domain PCI15_RS09985 PF00158 Sigma-54 interaction domain PCI15_RS09985 PF02954 Bacterial regulatory protein, Fis family PCI15_RS09990 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS09990 PF00072 Response regulator receiver domain PCI15_RS10010 PF01740 STAS domain PCI15_RS10015 PF02397 Bacterial sugar transferase PCI15_RS10025 PF13439 Glycosyltransferase Family 4 PCI15_RS10025 PF00534 Glycosyl transferases group 1 PCI15_RS10055 PF01380 SIS domain PCI15_RS10080 PF00534 Glycosyl transferases group 1 PCI15_RS10085 PF01370 NAD dependent epimerase/dehydratase family PCI15_RS10090 PF13188 PAS domain PCI15_RS10090 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS10090 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS10090 PF00563 EAL domain PCI15_RS10095 PF00158 Sigma-54 interaction domain PCI15_RS10095 PF00072 Response regulator receiver domain PCI15_RS10095 PF02954 Bacterial regulatory protein, Fis family PCI15_RS10105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS10105 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS10110 PF01638 HxlR-like helix-turn-helix PCI15_RS10120 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS10125 PF00483 Nucleotidyl transferase PCI15_RS10125 PF01050 Mannose-6-phosphate isomerase PCI15_RS10140 PF00999 Sodium/hydrogen exchanger family PCI15_RS10145 PF00005 ABC transporter PCI15_RS10145 PF03412 Peptidase C39 family PCI15_RS10145 PF00664 ABC transporter transmembrane region PCI15_RS10170 PF12833 Helix-turn-helix domain PCI15_RS10170 PF01965 DJ-1/PfpI family PCI15_RS10180 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PCI15_RS10185 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS10190 PF00571 CBS domain PCI15_RS10190 PF00005 ABC transporter PCI15_RS10195 PF00892 EamA-like transporter family PCI15_RS10200 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PCI15_RS10200 PF00355 Rieske [2Fe-2S] domain PCI15_RS10205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS10205 PF03466 LysR substrate binding domain PCI15_RS10210 PF00701 Dihydrodipicolinate synthetase family PCI15_RS10215 PF00171 Aldehyde dehydrogenase family PCI15_RS10225 PF00970 Oxidoreductase FAD-binding domain PCI15_RS10225 PF00042 Globin PCI15_RS10225 PF00175 Oxidoreductase NAD-binding domain PCI15_RS10230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS10230 PF03466 LysR substrate binding domain PCI15_RS10260 PF00202 Aminotransferase class-III PCI15_RS10265 PF00579 tRNA synthetases class I (W and Y) PCI15_RS10270 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system PCI15_RS10275 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PCI15_RS10280 PF00072 Response regulator receiver domain PCI15_RS10280 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS10305 PF03401 Tripartite tricarboxylate transporter family receptor PCI15_RS10310 PF00582 Universal stress protein family PCI15_RS10315 PF00171 Aldehyde dehydrogenase family PCI15_RS10350 PF00202 Aminotransferase class-III PCI15_RS10360 PF01613 Flavin reductase like domain PCI15_RS10370 PF08028 Acyl-CoA dehydrogenase, C-terminal domain PCI15_RS10375 PF03547 Membrane transport protein PCI15_RS10380 PF00171 Aldehyde dehydrogenase family PCI15_RS10385 PF01557 Fumarylacetoacetate (FAA) hydrolase family PCI15_RS10390 PF03328 HpcH/HpaI aldolase/citrate lyase family PCI15_RS10395 PF01557 Fumarylacetoacetate (FAA) hydrolase family PCI15_RS10400 PF01557 Fumarylacetoacetate (FAA) hydrolase family PCI15_RS10405 PF00171 Aldehyde dehydrogenase family PCI15_RS10410 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase PCI15_RS10425 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS10440 PF07690 Major Facilitator Superfamily PCI15_RS10450 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PCI15_RS10460 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase PCI15_RS10465 PF16363 GDP-mannose 4,6 dehydratase PCI15_RS10475 PF00009 Elongation factor Tu GTP binding domain PCI15_RS10480 PF01507 Phosphoadenosine phosphosulfate reductase family PCI15_RS10485 PF00459 Inositol monophosphatase family PCI15_RS10490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS10490 PF03466 LysR substrate binding domain PCI15_RS10495 PF00355 Rieske [2Fe-2S] domain PCI15_RS10495 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PCI15_RS10500 PF00171 Aldehyde dehydrogenase family PCI15_RS10505 PF18113 Rubredoxin binding C-terminal domain PCI15_RS10505 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS10525 PF00211 Adenylate and Guanylate cyclase catalytic domain PCI15_RS10530 PF00072 Response regulator receiver domain PCI15_RS10535 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS10535 PF00563 EAL domain PCI15_RS10535 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS10550 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS10555 PF17912 MalK OB fold domain PCI15_RS10555 PF00005 ABC transporter PCI15_RS10560 PF03009 Glycerophosphoryl diester phosphodiesterase family PCI15_RS10565 PF00356 Bacterial regulatory proteins, lacI family PCI15_RS10570 PF00459 Inositol monophosphatase family PCI15_RS10575 PF01061 ABC-2 type transporter PCI15_RS10580 PF00005 ABC transporter PCI15_RS10585 PF02798 Glutathione S-transferase, N-terminal domain PCI15_RS10595 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS10595 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS10605 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS10610 PF03358 NADPH-dependent FMN reductase PCI15_RS10625 PF00501 AMP-binding enzyme PCI15_RS10625 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS10630 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS10630 PF07729 FCD domain PCI15_RS10635 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS10645 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS10650 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS10650 PF07729 FCD domain PCI15_RS10660 PF13847 Methyltransferase domain PCI15_RS10675 PF02525 Flavodoxin-like fold PCI15_RS10680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS10680 PF03466 LysR substrate binding domain PCI15_RS10690 PF02810 SEC-C motif PCI15_RS10690 PF07517 SecA DEAD-like domain PCI15_RS10690 PF07516 SecA Wing and Scaffold domain PCI15_RS10690 PF01043 SecA preprotein cross-linking domain PCI15_RS10705 PF01212 Beta-eliminating lyase PCI15_RS10710 PF00005 ABC transporter PCI15_RS10720 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS10725 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS10735 PF14748 Pyrroline-5-carboxylate reductase dimerisation PCI15_RS10735 PF03807 NADP oxidoreductase coenzyme F420-dependent PCI15_RS10740 PF00892 EamA-like transporter family PCI15_RS10755 PF00176 SNF2 family N-terminal domain PCI15_RS10755 PF00271 Helicase conserved C-terminal domain PCI15_RS10765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PCI15_RS10765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PCI15_RS10770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PCI15_RS10770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PCI15_RS10775 PF00171 Aldehyde dehydrogenase family PCI15_RS10780 PF06426 Serine acetyltransferase, N-terminal PCI15_RS10780 PF00132 Bacterial transferase hexapeptide (six repeats) PCI15_RS10790 PF01546 Peptidase family M20/M25/M40 PCI15_RS10790 PF07687 Peptidase dimerisation domain PCI15_RS10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS10795 PF03466 LysR substrate binding domain PCI15_RS10800 PF01810 LysE type translocator PCI15_RS10815 PF03475 3-alpha domain PCI15_RS10815 PF03473 MOSC domain PCI15_RS10820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS10820 PF03466 LysR substrate binding domain PCI15_RS10845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PCI15_RS10860 PF00042 Globin PCI15_RS10860 PF00970 Oxidoreductase FAD-binding domain PCI15_RS10860 PF00175 Oxidoreductase NAD-binding domain PCI15_RS10870 PF00158 Sigma-54 interaction domain PCI15_RS10870 PF01590 GAF domain PCI15_RS10885 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS10895 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS10900 PF17200 Single Cache domain 2 PCI15_RS10900 PF07730 Histidine kinase PCI15_RS10905 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS10905 PF00072 Response regulator receiver domain PCI15_RS10915 PF01980 tRNA-methyltransferase O PCI15_RS10930 PF00664 ABC transporter transmembrane region PCI15_RS10930 PF00005 ABC transporter PCI15_RS10935 PF02129 X-Pro dipeptidyl-peptidase (S15 family) PCI15_RS10940 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS10940 PF13192 Thioredoxin domain PCI15_RS10945 PF10417 C-terminal domain of 1-Cys peroxiredoxin PCI15_RS10945 PF00578 AhpC/TSA family PCI15_RS10950 PF13580 SIS domain PCI15_RS10970 PF02567 Phenazine biosynthesis-like protein PCI15_RS10975 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS10975 PF00155 Aminotransferase class I and II PCI15_RS10980 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS10980 PF14759 Reductase C-terminal PCI15_RS10990 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS11000 PF00171 Aldehyde dehydrogenase family PCI15_RS11010 PF01266 FAD dependent oxidoreductase PCI15_RS11010 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PCI15_RS11030 PF00730 HhH-GPD superfamily base excision DNA repair protein PCI15_RS11030 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain PCI15_RS11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11035 PF03466 LysR substrate binding domain PCI15_RS11040 PF01970 Tripartite tricarboxylate transporter TctA family PCI15_RS11055 PF12411 Choline sulfatase enzyme C terminal PCI15_RS11055 PF00884 Sulfatase PCI15_RS11060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11060 PF03466 LysR substrate binding domain PCI15_RS11065 PF10415 Fumarase C C-terminus PCI15_RS11065 PF00206 Lyase PCI15_RS11070 PF00171 Aldehyde dehydrogenase family PCI15_RS11075 PF00892 EamA-like transporter family PCI15_RS11085 PF00815 Histidinol dehydrogenase PCI15_RS11090 PF03466 LysR substrate binding domain PCI15_RS11090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11100 PF12706 Beta-lactamase superfamily domain PCI15_RS11110 PF01209 ubiE/COQ5 methyltransferase family PCI15_RS11115 PF13378 Enolase C-terminal domain-like PCI15_RS11115 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS11120 PF00202 Aminotransferase class-III PCI15_RS11130 PF01212 Beta-eliminating lyase PCI15_RS11135 PF06155 Protein of unknown function (DUF971) PCI15_RS11135 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PCI15_RS11145 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS11145 PF13977 BetI-type transcriptional repressor, C-terminal PCI15_RS11150 PF00005 ABC transporter PCI15_RS11155 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS11160 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS11165 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS11180 PF00892 EamA-like transporter family PCI15_RS11185 PF01169 Uncharacterized protein family UPF0016 PCI15_RS11205 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS11210 PF08402 TOBE domain PCI15_RS11210 PF00005 ABC transporter PCI15_RS11220 PF00155 Aminotransferase class I and II PCI15_RS11220 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS11225 PF13378 Enolase C-terminal domain-like PCI15_RS11225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS11230 PF00171 Aldehyde dehydrogenase family PCI15_RS11235 PF01266 FAD dependent oxidoreductase PCI15_RS11240 PF00732 GMC oxidoreductase PCI15_RS11240 PF05199 GMC oxidoreductase PCI15_RS11250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11250 PF03466 LysR substrate binding domain PCI15_RS11255 PF02322 Cytochrome bd terminal oxidase subunit II PCI15_RS11260 PF01654 Cytochrome bd terminal oxidase subunit I PCI15_RS11275 PF00849 RNA pseudouridylate synthase PCI15_RS11275 PF01479 S4 domain PCI15_RS11305 PF01965 DJ-1/PfpI family PCI15_RS11315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11315 PF03466 LysR substrate binding domain PCI15_RS11320 PF00849 RNA pseudouridylate synthase PCI15_RS11325 PF01636 Phosphotransferase enzyme family PCI15_RS11335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PCI15_RS11335 PF00529 HlyD membrane-fusion protein of T1SS PCI15_RS11340 PF11742 Protein of unknown function (DUF3302) PCI15_RS11355 PF00463 Isocitrate lyase family PCI15_RS11360 PF08007 Cupin superfamily protein PCI15_RS11365 PF00588 SpoU rRNA Methylase family PCI15_RS11380 PF02734 DAK2 domain PCI15_RS11385 PF02733 Dak1 domain PCI15_RS11390 PF02502 Ribose/Galactose Isomerase PCI15_RS11400 PF00005 ABC transporter PCI15_RS11405 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS11410 PF13407 Periplasmic binding protein domain PCI15_RS11415 PF00107 Zinc-binding dehydrogenase PCI15_RS11415 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS11420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS11420 PF00672 HAMP domain PCI15_RS11425 PF00034 Cytochrome c PCI15_RS11425 PF03150 Di-haem cytochrome c peroxidase PCI15_RS11430 PF03971 Monomeric isocitrate dehydrogenase PCI15_RS11435 PF00793 DAHP synthetase I family PCI15_RS11440 PF11412 Disulphide bond corrector protein DsbC PCI15_RS11440 PF02683 Cytochrome C biogenesis protein transmembrane region PCI15_RS11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11445 PF03466 LysR substrate binding domain PCI15_RS11455 PF00376 MerR family regulatory protein PCI15_RS11455 PF09278 MerR, DNA binding PCI15_RS11460 PF03203 MerC mercury resistance protein PCI15_RS11485 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS11505 PF00501 AMP-binding enzyme PCI15_RS11505 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS11510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11510 PF03466 LysR substrate binding domain PCI15_RS11515 PF02743 Cache domain PCI15_RS11515 PF00672 HAMP domain PCI15_RS11515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS11535 PF08668 HDOD domain PCI15_RS11535 PF00563 EAL domain PCI15_RS11540 PF01926 50S ribosome-binding GTPase PCI15_RS11555 PF01259 SAICAR synthetase PCI15_RS11565 PF07690 Major Facilitator Superfamily PCI15_RS11570 PF03618 Kinase/pyrophosphorylase PCI15_RS11575 PF00391 PEP-utilising enzyme, mobile domain PCI15_RS11575 PF02896 PEP-utilising enzyme, TIM barrel domain PCI15_RS11575 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PCI15_RS11580 PF00717 Peptidase S24-like PCI15_RS11585 PF00817 impB/mucB/samB family PCI15_RS11585 PF13438 Domain of unknown function (DUF4113) PCI15_RS11585 PF11799 impB/mucB/samB family C-terminal domain PCI15_RS11585 PF11798 IMS family HHH motif PCI15_RS11590 PF02586 SOS response associated peptidase (SRAP) PCI15_RS11600 PF01863 Protein of unknown function DUF45 PCI15_RS11605 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS11620 PF12833 Helix-turn-helix domain PCI15_RS11620 PF01965 DJ-1/PfpI family PCI15_RS11630 PF05981 CreA protein PCI15_RS11635 PF16347 Domain of unknown function (DUF4976) PCI15_RS11635 PF00884 Sulfatase PCI15_RS11640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11640 PF03466 LysR substrate binding domain PCI15_RS11655 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS11655 PF07660 Secretin and TonB N terminus short domain PCI15_RS11655 PF00593 TonB dependent receptor PCI15_RS11660 PF01497 Periplasmic binding protein PCI15_RS11665 PF01032 FecCD transport family PCI15_RS11670 PF01032 FecCD transport family PCI15_RS11675 PF00005 ABC transporter PCI15_RS11685 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS11685 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS11690 PF01053 Cys/Met metabolism PLP-dependent enzyme PCI15_RS11695 PF12697 Alpha/beta hydrolase family PCI15_RS11700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PCI15_RS11700 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS11700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PCI15_RS11705 PF00501 AMP-binding enzyme PCI15_RS11705 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS11715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PCI15_RS11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11720 PF03466 LysR substrate binding domain PCI15_RS11725 PF03150 Di-haem cytochrome c peroxidase PCI15_RS11725 PF00034 Cytochrome c PCI15_RS11735 PF00155 Aminotransferase class I and II PCI15_RS11745 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS11755 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS11760 PF00106 short chain dehydrogenase PCI15_RS11765 PF00158 Sigma-54 interaction domain PCI15_RS11765 PF01590 GAF domain PCI15_RS11770 PF03466 LysR substrate binding domain PCI15_RS11770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11775 PF02801 Beta-ketoacyl synthase, C-terminal domain PCI15_RS11775 PF14765 Polyketide synthase dehydratase PCI15_RS11775 PF00109 Beta-ketoacyl synthase, N-terminal domain PCI15_RS11775 PF09277 Erythronolide synthase, docking PCI15_RS11775 PF16197 Ketoacyl-synthetase C-terminal extension PCI15_RS11775 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS11775 PF00698 Acyl transferase domain PCI15_RS11775 PF08659 KR domain PCI15_RS11775 PF08990 Erythronolide synthase docking PCI15_RS11775 PF00550 Phosphopantetheine attachment site PCI15_RS11780 PF13378 Enolase C-terminal domain-like PCI15_RS11780 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS11785 PF00557 Metallopeptidase family M24 PCI15_RS11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11790 PF03466 LysR substrate binding domain PCI15_RS11800 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS11800 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS11800 PF00563 EAL domain PCI15_RS11805 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS11805 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS11805 PF00563 EAL domain PCI15_RS11810 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS11810 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS11810 PF00563 EAL domain PCI15_RS11830 PF06445 GyrI-like small molecule binding domain PCI15_RS11830 PF12833 Helix-turn-helix domain PCI15_RS11840 PF07969 Amidohydrolase family PCI15_RS11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS11845 PF03466 LysR substrate binding domain PCI15_RS11850 PF00107 Zinc-binding dehydrogenase PCI15_RS11850 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS11855 PF00296 Luciferase-like monooxygenase PCI15_RS11860 PF00106 short chain dehydrogenase PCI15_RS11865 PF07731 Multicopper oxidase PCI15_RS11865 PF07732 Multicopper oxidase PCI15_RS11865 PF00394 Multicopper oxidase PCI15_RS11895 PF00437 Type II/IV secretion system protein PCI15_RS11895 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PCI15_RS11900 PF00482 Type II secretion system (T2SS), protein F PCI15_RS11905 PF07963 Prokaryotic N-terminal methylation motif PCI15_RS11905 PF08334 Type II secretion system (T2SS), protein G PCI15_RS11910 PF12019 Type II transport protein GspH PCI15_RS11925 PF03934 Type II secretion system (T2SS), protein K PCI15_RS11945 PF00263 Bacterial type II and III secretion system protein PCI15_RS11945 PF03958 Bacterial type II/III secretion system short domain PCI15_RS11970 PF00072 Response regulator receiver domain PCI15_RS11970 PF02954 Bacterial regulatory protein, Fis family PCI15_RS11970 PF00158 Sigma-54 interaction domain PCI15_RS11975 PF01471 Putative peptidoglycan binding domain PCI15_RS11975 PF13401 AAA domain PCI15_RS11995 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS11995 PF00072 Response regulator receiver domain PCI15_RS12010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PCI15_RS12010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PCI15_RS12015 PF00005 ABC transporter PCI15_RS12020 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS12120 PF01343 Peptidase family S49 PCI15_RS12130 PF03354 Phage Terminase PCI15_RS12170 PF11798 IMS family HHH motif PCI15_RS12170 PF13438 Domain of unknown function (DUF4113) PCI15_RS12170 PF11799 impB/mucB/samB family C-terminal domain PCI15_RS12170 PF00817 impB/mucB/samB family PCI15_RS12175 PF00717 Peptidase S24-like PCI15_RS12275 PF00436 Single-strand binding protein family PCI15_RS12330 PF01066 CDP-alcohol phosphatidyltransferase PCI15_RS12335 PF01541 GIY-YIG catalytic domain PCI15_RS12335 PF08459 UvrC Helix-hairpin-helix N-terminal PCI15_RS12335 PF02151 UvrB/uvrC motif PCI15_RS12355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PCI15_RS12355 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PCI15_RS12360 PF08534 Redoxin PCI15_RS12365 PF01048 Phosphorylase superfamily PCI15_RS12375 PF00849 RNA pseudouridylate synthase PCI15_RS12380 PF01027 Inhibitor of apoptosis-promoting Bax1 PCI15_RS12385 PF02635 DsrE/DsrF-like family PCI15_RS12390 PF02635 DsrE/DsrF-like family PCI15_RS12400 PF04358 DsrC like protein PCI15_RS12405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PCI15_RS12405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PCI15_RS12410 PF01261 Xylose isomerase-like TIM barrel PCI15_RS12415 PF01584 CheW-like domain PCI15_RS12420 PF08447 PAS fold PCI15_RS12420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS12425 PF01894 Uncharacterised protein family UPF0047 PCI15_RS12430 PF00892 EamA-like transporter family PCI15_RS12435 PF03466 LysR substrate binding domain PCI15_RS12435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS12440 PF01026 TatD related DNase PCI15_RS12450 PF09115 DNA polymerase III, delta subunit, C terminal PCI15_RS12455 PF02223 Thymidylate kinase PCI15_RS12460 PF02618 YceG-like family PCI15_RS12465 PF01063 Amino-transferase class IV PCI15_RS12470 PF02801 Beta-ketoacyl synthase, C-terminal domain PCI15_RS12470 PF00109 Beta-ketoacyl synthase, N-terminal domain PCI15_RS12475 PF00550 Phosphopantetheine attachment site PCI15_RS12485 PF00698 Acyl transferase domain PCI15_RS12490 PF02504 Fatty acid synthesis protein PCI15_RS12495 PF01783 Ribosomal L32p protein family PCI15_RS12500 PF02620 Large ribosomal RNA subunit accumulation protein YceD PCI15_RS12505 PF02545 Maf-like protein PCI15_RS12515 PF01343 Peptidase family S49 PCI15_RS12515 PF06965 Na+/H+ antiporter 1 PCI15_RS12520 PF13419 Haloacid dehalogenase-like hydrolase PCI15_RS12525 PF02082 Transcriptional regulator PCI15_RS12530 PF03737 Aldolase/RraA PCI15_RS12545 PF13183 4Fe-4S dicluster domain PCI15_RS12545 PF02913 FAD linked oxidases, C-terminal domain PCI15_RS12545 PF01565 FAD binding domain PCI15_RS12550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS12550 PF03466 LysR substrate binding domain PCI15_RS12555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS12555 PF00672 HAMP domain PCI15_RS12560 PF00892 EamA-like transporter family PCI15_RS12575 PF09905 DNA-binding protein VF530 PCI15_RS12615 PF02525 Flavodoxin-like fold PCI15_RS12625 PF00106 short chain dehydrogenase PCI15_RS12635 PF02261 Aspartate decarboxylase PCI15_RS12640 PF02607 B12 binding domain PCI15_RS12640 PF00809 Pterin binding enzyme PCI15_RS12640 PF02965 Vitamin B12 dependent methionine synthase, activation domain PCI15_RS12640 PF02310 B12 binding domain PCI15_RS12640 PF02574 Homocysteine S-methyltransferase PCI15_RS12645 PF00141 Peroxidase PCI15_RS12655 PF00912 Transglycosylase PCI15_RS12665 PF05193 Peptidase M16 inactive domain PCI15_RS12665 PF00675 Insulinase (Peptidase family M16) PCI15_RS12665 PF08367 Peptidase M16C associated PCI15_RS12675 PF01494 FAD binding domain PCI15_RS12680 PF02403 Seryl-tRNA synthetase N-terminal domain PCI15_RS12680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PCI15_RS12685 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PCI15_RS12690 PF16193 AAA C-terminal domain PCI15_RS12690 PF00004 ATPase family associated with various cellular activities (AAA) PCI15_RS12690 PF12002 MgsA AAA+ ATPase C terminal PCI15_RS12695 PF03548 Outer membrane lipoprotein carrier protein LolA PCI15_RS12710 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS12715 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PCI15_RS12720 PF04376 Arginine-tRNA-protein transferase, N terminus PCI15_RS12720 PF04377 Arginine-tRNA-protein transferase, C terminus PCI15_RS12725 PF01176 Translation initiation factor 1A / IF-1 PCI15_RS12730 PF02861 Clp amino terminal domain, pathogenicity island component PCI15_RS12730 PF10431 C-terminal, D2-small domain, of ClpB protein PCI15_RS12730 PF00004 ATPase family associated with various cellular activities (AAA) PCI15_RS12730 PF07724 AAA domain (Cdc48 subfamily) PCI15_RS12730 PF17871 AAA lid domain PCI15_RS12735 PF02617 ATP-dependent Clp protease adaptor protein ClpS PCI15_RS12740 PF00313 'Cold-shock' DNA-binding domain PCI15_RS12745 PF00180 Isocitrate/isopropylmalate dehydrogenase PCI15_RS12750 PF00849 RNA pseudouridylate synthase PCI15_RS12755 PF02391 MoaE protein PCI15_RS12760 PF00293 NUDIX domain PCI15_RS12770 PF04356 Protein of unknown function (DUF489) PCI15_RS12775 PF08328 Adenylosuccinate lyase C-terminal PCI15_RS12775 PF00206 Lyase PCI15_RS12785 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS12785 PF00360 Phytochrome region PCI15_RS12785 PF00563 EAL domain PCI15_RS12785 PF01590 GAF domain PCI15_RS12795 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS12805 PF07724 AAA domain (Cdc48 subfamily) PCI15_RS12805 PF10431 C-terminal, D2-small domain, of ClpB protein PCI15_RS12805 PF06689 ClpX C4-type zinc finger PCI15_RS12810 PF00574 Clp protease PCI15_RS12815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS12815 PF05697 Bacterial trigger factor protein (TF) PCI15_RS12815 PF05698 Bacterial trigger factor protein (TF) C-terminus PCI15_RS12840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PCI15_RS12840 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS12840 PF00403 Heavy-metal-associated domain PCI15_RS12845 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS12845 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS12845 PF00563 EAL domain PCI15_RS12870 PF01406 tRNA synthetases class I (C) catalytic domain PCI15_RS12870 PF09190 DALR domain PCI15_RS12875 PF00210 Ferritin-like domain PCI15_RS12880 PF03061 Thioesterase superfamily PCI15_RS12885 PF00881 Nitroreductase family PCI15_RS12890 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PCI15_RS12890 PF00749 tRNA synthetases class I (E and Q), catalytic domain PCI15_RS12895 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PCI15_RS12900 PF12850 Calcineurin-like phosphoesterase superfamily domain PCI15_RS12905 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) PCI15_RS12910 PF04304 Protein of unknown function (DUF454) PCI15_RS12920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS12920 PF00672 HAMP domain PCI15_RS12920 PF02743 Cache domain PCI15_RS12925 PF01207 Dihydrouridine synthase (Dus) PCI15_RS12930 PF00156 Phosphoribosyl transferase domain PCI15_RS12935 PF02674 Colicin V production protein PCI15_RS12945 PF08245 Mur ligase middle domain PCI15_RS12945 PF02875 Mur ligase family, glutamate ligase domain PCI15_RS12950 PF17848 Acetyl-coA carboxylase zinc finger domain PCI15_RS12950 PF01039 Carboxyl transferase domain PCI15_RS12955 PF00290 Tryptophan synthase alpha chain PCI15_RS12960 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS12965 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase PCI15_RS12970 PF01416 tRNA pseudouridine synthase PCI15_RS12980 PF01966 HD domain PCI15_RS12985 PF12833 Helix-turn-helix domain PCI15_RS12985 PF02311 AraC-like ligand binding domain PCI15_RS12990 PF06155 Protein of unknown function (DUF971) PCI15_RS12990 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PCI15_RS13000 PF03466 LysR substrate binding domain PCI15_RS13000 PF00005 ABC transporter PCI15_RS13005 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS13015 PF00672 HAMP domain PCI15_RS13015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS13045 PF00271 Helicase conserved C-terminal domain PCI15_RS13045 PF00270 DEAD/DEAH box helicase PCI15_RS13070 PF00206 Lyase PCI15_RS13070 PF10415 Fumarase C C-terminus PCI15_RS13080 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PCI15_RS13085 PF00563 EAL domain PCI15_RS13085 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS13085 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS13095 PF00563 EAL domain PCI15_RS13095 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS13095 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS13105 PF13416 Bacterial extracellular solute-binding protein PCI15_RS13110 PF00491 Arginase family PCI15_RS13115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS13115 PF03466 LysR substrate binding domain PCI15_RS13130 PF01965 DJ-1/PfpI family PCI15_RS13130 PF12833 Helix-turn-helix domain PCI15_RS13135 PF00202 Aminotransferase class-III PCI15_RS13145 PF04958 Arginine N-succinyltransferase beta subunit PCI15_RS13150 PF04958 Arginine N-succinyltransferase beta subunit PCI15_RS13155 PF00171 Aldehyde dehydrogenase family PCI15_RS13160 PF04996 Succinylarginine dihydrolase PCI15_RS13165 PF02567 Phenazine biosynthesis-like protein PCI15_RS13175 PF00072 Response regulator receiver domain PCI15_RS13175 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS13190 PF01037 Lrp/AsnC ligand binding domain PCI15_RS13195 PF04958 Arginine N-succinyltransferase beta subunit PCI15_RS13210 PF01037 Lrp/AsnC ligand binding domain PCI15_RS13215 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PCI15_RS13215 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PCI15_RS13225 PF03466 LysR substrate binding domain PCI15_RS13225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS13235 PF03466 LysR substrate binding domain PCI15_RS13235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS13240 PF00924 Mechanosensitive ion channel PCI15_RS13245 PF04191 Phospholipid methyltransferase PCI15_RS13270 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS13270 PF00970 Oxidoreductase FAD-binding domain PCI15_RS13270 PF00175 Oxidoreductase NAD-binding domain PCI15_RS13275 PF00355 Rieske [2Fe-2S] domain PCI15_RS13275 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PCI15_RS13280 PF01554 MatE PCI15_RS13285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS13285 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS13285 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS13290 PF11849 Domain of unknown function (DUF3369) PCI15_RS13300 PF01042 Endoribonuclease L-PSP PCI15_RS13310 PF01546 Peptidase family M20/M25/M40 PCI15_RS13310 PF07687 Peptidase dimerisation domain PCI15_RS13315 PF00324 Amino acid permease PCI15_RS13330 PF01032 FecCD transport family PCI15_RS13340 PF00005 ABC transporter PCI15_RS13345 PF08543 Phosphomethylpyrimidine kinase PCI15_RS13350 PF00005 ABC transporter PCI15_RS13355 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS13360 PF09084 NMT1/THI5 like PCI15_RS13365 PF03070 TENA/THI-4/PQQC family PCI15_RS13375 PF03824 High-affinity nickel-transport protein PCI15_RS13385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PCI15_RS13390 PF11008 Protein of unknown function (DUF2846) PCI15_RS13400 PF00171 Aldehyde dehydrogenase family PCI15_RS13410 PF00561 alpha/beta hydrolase fold PCI15_RS13415 PF08402 TOBE domain PCI15_RS13415 PF00005 ABC transporter PCI15_RS13420 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS13425 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS13435 PF00296 Luciferase-like monooxygenase PCI15_RS13440 PF00171 Aldehyde dehydrogenase family PCI15_RS13445 PF01613 Flavin reductase like domain PCI15_RS13450 PF05651 Putative sugar diacid recognition PCI15_RS13450 PF13556 PucR C-terminal helix-turn-helix domain PCI15_RS13450 PF17853 GGDEF-like domain PCI15_RS13490 PF04002 RadC-like JAB domain PCI15_RS13615 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS13615 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS13615 PF00563 EAL domain PCI15_RS13635 PF05772 NinB protein PCI15_RS13695 PF00436 Single-strand binding protein family PCI15_RS13740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS13740 PF00072 Response regulator receiver domain PCI15_RS13740 PF13188 PAS domain PCI15_RS13740 PF08448 PAS fold PCI15_RS13740 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS13745 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS13745 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS13745 PF00563 EAL domain PCI15_RS13750 PF00072 Response regulator receiver domain PCI15_RS13755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS13755 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS13765 PF00072 Response regulator receiver domain PCI15_RS13770 PF00271 Helicase conserved C-terminal domain PCI15_RS13770 PF04851 Type III restriction enzyme, res subunit PCI15_RS13770 PF12344 Ultra-violet resistance protein B PCI15_RS13770 PF17757 UvrB interaction domain PCI15_RS13770 PF02151 UvrB/uvrC motif PCI15_RS13775 PF00155 Aminotransferase class I and II PCI15_RS13780 PF03734 L,D-transpeptidase catalytic domain PCI15_RS13780 PF01471 Putative peptidoglycan binding domain PCI15_RS13795 PF00561 alpha/beta hydrolase fold PCI15_RS13800 PF12833 Helix-turn-helix domain PCI15_RS13800 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PCI15_RS13800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PCI15_RS13800 PF02805 Metal binding domain of Ada PCI15_RS13805 PF00892 EamA-like transporter family PCI15_RS13815 PF00183 Hsp90 protein PCI15_RS13815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS13825 PF04264 YceI-like domain PCI15_RS13830 PF01292 Prokaryotic cytochrome b561 PCI15_RS13840 PF03466 LysR substrate binding domain PCI15_RS13840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS13860 PF17785 PUA-like domain PCI15_RS13860 PF10672 S-adenosylmethionine-dependent methyltransferase PCI15_RS13865 PF13538 UvrD-like helicase C-terminal domain PCI15_RS13870 PF13361 UvrD-like helicase C-terminal domain PCI15_RS13870 PF00580 UvrD/REP helicase N-terminal domain PCI15_RS13870 PF12705 PD-(D/E)XK nuclease superfamily PCI15_RS13875 PF17946 RecC C-terminal domain PCI15_RS13895 PF05552 Conserved TM helix PCI15_RS13895 PF00924 Mechanosensitive ion channel PCI15_RS13900 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PCI15_RS13900 PF12806 Acetyl-CoA dehydrogenase C-terminal like PCI15_RS13900 PF02770 Acyl-CoA dehydrogenase, middle domain PCI15_RS13900 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PCI15_RS13905 PF01575 MaoC like domain PCI15_RS13915 PF02445 Quinolinate synthetase A protein PCI15_RS13920 PF06508 Queuosine biosynthesis protein QueC PCI15_RS13925 PF16331 TolA binding protein trimerisation PCI15_RS13925 PF13525 Outer membrane lipoprotein PCI15_RS13930 PF00691 OmpA family PCI15_RS13935 PF04052 TolB amino-terminal domain PCI15_RS13935 PF07676 WD40-like Beta Propeller Repeat PCI15_RS13945 PF02472 Biopolymer transport protein ExbD/TolR PCI15_RS13950 PF01618 MotA/TolQ/ExbB proton channel family PCI15_RS13960 PF17864 RuvB AAA lid domain PCI15_RS13960 PF05491 RuvB C-terminal winged helix domain PCI15_RS13960 PF05496 Holliday junction DNA helicase RuvB P-loop domain PCI15_RS13965 PF07499 RuvA, C-terminal domain PCI15_RS13965 PF01330 RuvA N terminal domain PCI15_RS13970 PF03458 UPF0126 domain PCI15_RS13975 PF02075 Crossover junction endodeoxyribonuclease RuvC PCI15_RS13980 PF01336 OB-fold nucleic acid binding domain PCI15_RS13980 PF00152 tRNA synthetases class II (D, K and N) PCI15_RS13980 PF02938 GAD domain PCI15_RS13995 PF00549 CoA-ligase PCI15_RS13995 PF02629 CoA binding domain PCI15_RS14000 PF00549 CoA-ligase PCI15_RS14000 PF08442 ATP-grasp domain PCI15_RS14005 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS14005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PCI15_RS14010 PF02817 e3 binding domain PCI15_RS14010 PF00364 Biotin-requiring enzyme PCI15_RS14010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PCI15_RS14015 PF00676 Dehydrogenase E1 component PCI15_RS14015 PF16078 2-oxoglutarate dehydrogenase N-terminus PCI15_RS14015 PF02779 Transketolase, pyrimidine binding domain PCI15_RS14015 PF16870 2-oxoglutarate dehydrogenase C-terminal PCI15_RS14020 PF13085 2Fe-2S iron-sulfur cluster binding domain PCI15_RS14025 PF00890 FAD binding domain PCI15_RS14025 PF02910 Fumarate reductase flavoprotein C-term PCI15_RS14030 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PCI15_RS14035 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit PCI15_RS14040 PF00285 Citrate synthase, C-terminal domain PCI15_RS14045 PF01170 Putative RNA methylase family UPF0020 PCI15_RS14045 PF02926 THUMP domain PCI15_RS14045 PF10672 S-adenosylmethionine-dependent methyltransferase PCI15_RS14050 PF04957 Ribosome modulation factor PCI15_RS14055 PF01180 Dihydroorotate dehydrogenase PCI15_RS14070 PF01370 NAD dependent epimerase/dehydratase family PCI15_RS14070 PF08338 Domain of unknown function (DUF1731) PCI15_RS14075 PF00677 Lumazine binding domain PCI15_RS14085 PF06039 Malate:quinone oxidoreductase (Mqo) PCI15_RS14095 PF01545 Cation efflux family PCI15_RS14095 PF16916 Dimerisation domain of Zinc Transporter PCI15_RS14100 PF09186 Domain of unknown function (DUF1949) PCI15_RS14100 PF01205 Uncharacterized protein family UPF0029 PCI15_RS14105 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14110 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS14110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PCI15_RS14115 PF03372 Endonuclease/Exonuclease/phosphatase family PCI15_RS14120 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS14120 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS14130 PF00005 ABC transporter PCI15_RS14130 PF00571 CBS domain PCI15_RS14135 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS14140 PF00356 Bacterial regulatory proteins, lacI family PCI15_RS14140 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PCI15_RS14145 PF00582 Universal stress protein family PCI15_RS14155 PF00210 Ferritin-like domain PCI15_RS14160 PF00210 Ferritin-like domain PCI15_RS14170 PF04324 BFD-like [2Fe-2S] binding domain PCI15_RS14180 PF00072 Response regulator receiver domain PCI15_RS14180 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14190 PF01022 Bacterial regulatory protein, arsR family PCI15_RS14195 PF00583 Acetyltransferase (GNAT) family PCI15_RS14195 PF13607 Succinyl-CoA ligase like flavodoxin domain PCI15_RS14195 PF13380 CoA binding domain PCI15_RS14215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PCI15_RS14215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PCI15_RS14215 PF11890 Domain of unknown function (DUF3410) PCI15_RS14225 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS14245 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PCI15_RS14250 PF00873 AcrB/AcrD/AcrF family PCI15_RS14255 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS14255 PF00072 Response regulator receiver domain PCI15_RS14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS14260 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS14265 PF01292 Prokaryotic cytochrome b561 PCI15_RS14280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS14280 PF00672 HAMP domain PCI15_RS14280 PF12729 Four helix bundle sensory module for signal transduction PCI15_RS14285 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14285 PF08448 PAS fold PCI15_RS14290 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14290 PF08447 PAS fold PCI15_RS14290 PF08448 PAS fold PCI15_RS14290 PF00563 EAL domain PCI15_RS14295 PF00127 Copper binding proteins, plastocyanin/azurin family PCI15_RS14300 PF12151 Mannan-binding protein PCI15_RS14315 PF00266 Aminotransferase class-V PCI15_RS14320 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS14325 PF14031 Putative serine dehydratase domain PCI15_RS14325 PF01168 Alanine racemase, N-terminal domain PCI15_RS14330 PF02423 Ornithine cyclodeaminase/mu-crystallin family PCI15_RS14365 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS14365 PF13378 Enolase C-terminal domain-like PCI15_RS14380 PF00092 von Willebrand factor type A domain PCI15_RS14380 PF07584 Aerotolerance regulator N-terminal PCI15_RS14390 PF01882 Protein of unknown function DUF58 PCI15_RS14395 PF17863 AAA lid domain PCI15_RS14395 PF07726 ATPase family associated with various cellular activities (AAA) PCI15_RS14410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS14410 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS14415 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS14415 PF00072 Response regulator receiver domain PCI15_RS14420 PF01502 Phosphoribosyl-AMP cyclohydrolase PCI15_RS14430 PF02649 Type I GTP cyclohydrolase folE2 PCI15_RS14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS14435 PF03466 LysR substrate binding domain PCI15_RS14445 PF01131 DNA topoisomerase PCI15_RS14445 PF01751 Toprim domain PCI15_RS14465 PF00462 Glutaredoxin PCI15_RS14485 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14495 PF13404 AsnC-type helix-turn-helix domain PCI15_RS14495 PF01037 Lrp/AsnC ligand binding domain PCI15_RS14510 PF11940 Domain of unknown function (DUF3458) Ig-like fold PCI15_RS14510 PF01433 Peptidase family M1 domain PCI15_RS14510 PF17432 Domain of unknown function (DUF3458_C) ARM repeats PCI15_RS14520 PF07023 Protein of unknown function (DUF1315) PCI15_RS14525 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease PCI15_RS14525 PF01694 Rhomboid family PCI15_RS14530 PF00149 Calcineurin-like phosphoesterase PCI15_RS14535 PF01513 ATP-NAD kinase PCI15_RS14540 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS14545 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14545 PF08448 PAS fold PCI15_RS14600 PF07348 Syd protein (SUKH-2) PCI15_RS14615 PF01641 SelR domain PCI15_RS14620 PF00155 Aminotransferase class I and II PCI15_RS14630 PF08668 HDOD domain PCI15_RS14635 PF17785 PUA-like domain PCI15_RS14635 PF10672 S-adenosylmethionine-dependent methyltransferase PCI15_RS14640 PF01435 Peptidase family M48 PCI15_RS14655 PF11842 Domain of unknown function (DUF3362) PCI15_RS14655 PF04055 Radical SAM superfamily PCI15_RS14655 PF08497 Radical SAM N-terminal PCI15_RS14670 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS14675 PF03060 Nitronate monooxygenase PCI15_RS14680 PF00271 Helicase conserved C-terminal domain PCI15_RS14680 PF00270 DEAD/DEAH box helicase PCI15_RS14685 PF00563 EAL domain PCI15_RS14685 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS14685 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14690 PF01914 MarC family integral membrane protein PCI15_RS14700 PF00877 NlpC/P60 family PCI15_RS14715 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PCI15_RS14720 PF00873 AcrB/AcrD/AcrF family PCI15_RS14730 PF03692 Putative zinc- or iron-chelating domain PCI15_RS14735 PF04245 37-kD nucleoid-associated bacterial protein PCI15_RS14755 PF00692 dUTPase PCI15_RS14760 PF10609 NUBPL iron-transfer P-loop NTPase PCI15_RS14770 PF00857 Isochorismatase family PCI15_RS14780 PF12706 Beta-lactamase superfamily domain PCI15_RS14785 PF00578 AhpC/TSA family PCI15_RS14785 PF10417 C-terminal domain of 1-Cys peroxiredoxin PCI15_RS14795 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system PCI15_RS14800 PF03831 PhnA domain PCI15_RS14800 PF08274 PhnA Zinc-Ribbon PCI15_RS14805 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS14805 PF00563 EAL domain PCI15_RS14805 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14810 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS14815 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS14820 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS14825 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PCI15_RS14825 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PCI15_RS14830 PF02780 Transketolase, C-terminal domain PCI15_RS14830 PF02779 Transketolase, pyrimidine binding domain PCI15_RS14835 PF00456 Transketolase, thiamine diphosphate binding domain PCI15_RS14840 PF00356 Bacterial regulatory proteins, lacI family PCI15_RS14840 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PCI15_RS14845 PF01903 CbiX PCI15_RS14850 PF00155 Aminotransferase class I and II PCI15_RS14855 PF17113 Regulatory signalling modulator protein AmpE PCI15_RS14855 PF03186 CobD/Cbib protein PCI15_RS14860 PF07685 CobB/CobQ-like glutamine amidotransferase domain PCI15_RS14860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PCI15_RS14865 PF02514 CobN/Magnesium Chelatase PCI15_RS14870 PF02492 CobW/HypB/UreG, nucleotide-binding domain PCI15_RS14870 PF07683 Cobalamin synthesis protein cobW C-terminal domain PCI15_RS14875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PCI15_RS14880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PCI15_RS14885 PF11760 Cobalamin synthesis G N-terminal PCI15_RS14885 PF01890 Cobalamin synthesis G C-terminus PCI15_RS14885 PF11761 Cobalamin biosynthesis central region PCI15_RS14890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PCI15_RS14895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PCI15_RS14900 PF02570 Precorrin-8X methylmutase PCI15_RS14905 PF02571 Precorrin-6x reductase CbiJ/CobK PCI15_RS14910 PF01888 CbiD PCI15_RS14915 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PCI15_RS14915 PF07685 CobB/CobQ-like glutamine amidotransferase domain PCI15_RS14920 PF12557 Cob(I)alamin adenosyltransferase N terminal PCI15_RS14920 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PCI15_RS14925 PF13519 von Willebrand factor type A domain PCI15_RS14925 PF17863 AAA lid domain PCI15_RS14925 PF07728 AAA domain (dynein-related subfamily) PCI15_RS14935 PF00005 ABC transporter PCI15_RS14950 PF01891 Cobalt uptake substrate-specific transmembrane region PCI15_RS14960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS14960 PF00672 HAMP domain PCI15_RS14960 PF12729 Four helix bundle sensory module for signal transduction PCI15_RS14970 PF00155 Aminotransferase class I and II PCI15_RS14975 PF08448 PAS fold PCI15_RS14975 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS14985 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS14985 PF00155 Aminotransferase class I and II PCI15_RS14990 PF05971 RNA methyltransferase PCI15_RS15005 PF08443 RimK-like ATP-grasp domain PCI15_RS15005 PF18030 RimK PreATP-grasp domain PCI15_RS15015 PF16200 C-terminal region of band_7 PCI15_RS15015 PF01145 SPFH domain / Band 7 family PCI15_RS15030 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS15030 PF16925 Tetracyclin repressor-like, C-terminal domain PCI15_RS15035 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PCI15_RS15040 PF00873 AcrB/AcrD/AcrF family PCI15_RS15045 PF02321 Outer membrane efflux protein PCI15_RS15050 PF07055 Enoyl reductase FAD binding domain PCI15_RS15050 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase PCI15_RS15050 PF12241 Trans-2-enoyl-CoA reductase catalytic region PCI15_RS15055 PF00766 Electron transfer flavoprotein FAD-binding domain PCI15_RS15055 PF01012 Electron transfer flavoprotein domain PCI15_RS15060 PF01012 Electron transfer flavoprotein domain PCI15_RS15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS15070 PF03466 LysR substrate binding domain PCI15_RS15075 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS15075 PF08447 PAS fold PCI15_RS15080 PF08447 PAS fold PCI15_RS15080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS15090 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS15095 PF00005 ABC transporter PCI15_RS15100 PF12833 Helix-turn-helix domain PCI15_RS15135 PF02311 AraC-like ligand binding domain PCI15_RS15135 PF12833 Helix-turn-helix domain PCI15_RS15145 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) PCI15_RS15150 PF00202 Aminotransferase class-III PCI15_RS15165 PF02463 RecF/RecN/SMC N terminal domain PCI15_RS15180 PF16177 Acetyl-coenzyme A synthetase N-terminus PCI15_RS15180 PF00501 AMP-binding enzyme PCI15_RS15180 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS15185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PCI15_RS15185 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PCI15_RS15190 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS15190 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PCI15_RS15190 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PCI15_RS15195 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS15200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PCI15_RS15200 PF02770 Acyl-CoA dehydrogenase, middle domain PCI15_RS15200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PCI15_RS15205 PF00171 Aldehyde dehydrogenase family PCI15_RS15210 PF02311 AraC-like ligand binding domain PCI15_RS15210 PF12833 Helix-turn-helix domain PCI15_RS15215 PF00563 EAL domain PCI15_RS15215 PF01590 GAF domain PCI15_RS15215 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS15215 PF00360 Phytochrome region PCI15_RS15220 PF06965 Na+/H+ antiporter 1 PCI15_RS15235 PF00561 alpha/beta hydrolase fold PCI15_RS15240 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PCI15_RS15245 PF13977 BetI-type transcriptional repressor, C-terminal PCI15_RS15245 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS15250 PF02803 Thiolase, C-terminal domain PCI15_RS15250 PF00108 Thiolase, N-terminal domain PCI15_RS15260 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS15270 PF00005 ABC transporter PCI15_RS15275 PF00005 ABC transporter PCI15_RS15275 PF12399 Branched-chain amino acid ATP-binding cassette transporter PCI15_RS15280 PF13411 MerR HTH family regulatory protein PCI15_RS15285 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PCI15_RS15285 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PCI15_RS15285 PF02770 Acyl-CoA dehydrogenase, middle domain PCI15_RS15290 PF01039 Carboxyl transferase domain PCI15_RS15295 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS15300 PF18140 Propionyl-coenzyme A carboxylase BT domain PCI15_RS15300 PF02785 Biotin carboxylase C-terminal domain PCI15_RS15300 PF00289 Biotin carboxylase, N-terminal domain PCI15_RS15300 PF00364 Biotin-requiring enzyme PCI15_RS15300 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PCI15_RS15305 PF00682 HMGL-like PCI15_RS15315 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS15315 PF00501 AMP-binding enzyme PCI15_RS15320 PF01209 ubiE/COQ5 methyltransferase family PCI15_RS15325 PF06291 Bor protein PCI15_RS15330 PF00491 Arginase family PCI15_RS15340 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS15345 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS15350 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS15360 PF01925 Sulfite exporter TauE/SafE PCI15_RS15365 PF00916 Sulfate permease family PCI15_RS15365 PF01740 STAS domain PCI15_RS15370 PF11799 impB/mucB/samB family C-terminal domain PCI15_RS15370 PF00817 impB/mucB/samB family PCI15_RS15370 PF11798 IMS family HHH motif PCI15_RS15380 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS15380 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS15380 PF00563 EAL domain PCI15_RS15395 PF00226 DnaJ domain PCI15_RS15395 PF00684 DnaJ central domain PCI15_RS15395 PF01556 DnaJ C terminal domain PCI15_RS15405 PF00072 Response regulator receiver domain PCI15_RS15405 PF00158 Sigma-54 interaction domain PCI15_RS15410 PF04073 Aminoacyl-tRNA editing domain PCI15_RS15415 PF12843 Putative quorum-sensing-regulated virulence factor PCI15_RS15420 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS15420 PF03476 MOSC N-terminal beta barrel domain PCI15_RS15420 PF03473 MOSC domain PCI15_RS15425 PF17176 tRNA-binding domain PCI15_RS15425 PF05127 Helicase PCI15_RS15425 PF13718 GNAT acetyltransferase 2 PCI15_RS15425 PF08351 Domain of unknown function (DUF1726) PCI15_RS15445 PF02798 Glutathione S-transferase, N-terminal domain PCI15_RS15445 PF00043 Glutathione S-transferase, C-terminal domain PCI15_RS15450 PF01810 LysE type translocator PCI15_RS15460 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS15460 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS15460 PF16350 FAD dependent oxidoreductase central domain PCI15_RS15460 PF01266 FAD dependent oxidoreductase PCI15_RS15465 PF01266 FAD dependent oxidoreductase PCI15_RS15470 PF04267 Sarcosine oxidase, delta subunit family PCI15_RS15475 PF17806 Sarcosine oxidase A3 domain PCI15_RS15475 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS15475 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS15475 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS15485 PF09335 SNARE associated Golgi protein PCI15_RS15490 PF00270 DEAD/DEAH box helicase PCI15_RS15490 PF00271 Helicase conserved C-terminal domain PCI15_RS15490 PF00570 HRDC domain PCI15_RS15490 PF09382 RQC domain PCI15_RS15490 PF16124 RecQ zinc-binding PCI15_RS15540 PF13332 Hemagglutinin repeat PCI15_RS15540 PF13018 Extended Signal Peptide of Type V secretion system PCI15_RS15540 PF04829 Pre-toxin domain with VENN motif PCI15_RS15540 PF05860 haemagglutination activity domain PCI15_RS15545 PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB PCI15_RS15545 PF17287 POTRA domain PCI15_RS15545 PF08479 POTRA domain, ShlB-type PCI15_RS15550 PF05433 Glycine zipper 2TM domain PCI15_RS15555 PF00664 ABC transporter transmembrane region PCI15_RS15555 PF00005 ABC transporter PCI15_RS15565 PF01722 BolA-like protein PCI15_RS15585 PF06470 SMC proteins Flexible Hinge Domain PCI15_RS15585 PF02463 RecF/RecN/SMC N terminal domain PCI15_RS15600 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding PCI15_RS15600 PF18381 YcaO cyclodehydratase C-terminal domain PCI15_RS15635 PF02127 Aminopeptidase I zinc metalloprotease (M18) PCI15_RS15640 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS15640 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PCI15_RS15645 PF17804 Tail specific protease N-terminal domain PCI15_RS15645 PF03572 Peptidase family S41 PCI15_RS15645 PF00595 PDZ domain PCI15_RS15645 PF11818 C-terminal domain of tail specific protease (DUF3340) PCI15_RS15655 PF00575 S1 RNA binding domain PCI15_RS15660 PF06224 Winged helix DNA-binding domain PCI15_RS15670 PF00056 lactate/malate dehydrogenase, NAD binding domain PCI15_RS15670 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PCI15_RS15675 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS15675 PF08362 YcdC-like protein, C-terminal region PCI15_RS15680 PF00171 Aldehyde dehydrogenase family PCI15_RS15685 PF00202 Aminotransferase class-III PCI15_RS15690 PF03466 LysR substrate binding domain PCI15_RS15690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS15695 PF00171 Aldehyde dehydrogenase family PCI15_RS15700 PF00672 HAMP domain PCI15_RS15700 PF02743 Cache domain PCI15_RS15700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS15705 PF00732 GMC oxidoreductase PCI15_RS15705 PF05199 GMC oxidoreductase PCI15_RS15710 PF00171 Aldehyde dehydrogenase family PCI15_RS15715 PF08501 Shikimate dehydrogenase substrate binding domain PCI15_RS15715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PCI15_RS15715 PF01488 Shikimate / quinate 5-dehydrogenase PCI15_RS15720 PF00106 short chain dehydrogenase PCI15_RS15725 PF00005 ABC transporter PCI15_RS15730 PF00005 ABC transporter PCI15_RS15730 PF12399 Branched-chain amino acid ATP-binding cassette transporter PCI15_RS15735 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS15740 PF13458 Periplasmic binding protein PCI15_RS15745 PF00356 Bacterial regulatory proteins, lacI family PCI15_RS15750 PF12729 Four helix bundle sensory module for signal transduction PCI15_RS15750 PF00672 HAMP domain PCI15_RS15750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS15755 PF02678 Pirin PCI15_RS15755 PF17954 Quercetinase C-terminal cupin domain PCI15_RS15760 PF00171 Aldehyde dehydrogenase family PCI15_RS15765 PF05573 NosL PCI15_RS15770 PF12679 ABC-2 family transporter protein PCI15_RS15775 PF00005 ABC transporter PCI15_RS15780 PF05048 Periplasmic copper-binding protein (NosD) PCI15_RS15785 PF18764 Nitrous oxide reductase propeller repeat PCI15_RS15785 PF18793 Nitrous oxide reductase propeller repeat 2 PCI15_RS15790 PF04205 FMN-binding domain PCI15_RS15790 PF12801 4Fe-4S binding domain PCI15_RS15805 PF01740 STAS domain PCI15_RS15805 PF00916 Sulfate permease family PCI15_RS15815 PF00171 Aldehyde dehydrogenase family PCI15_RS15820 PF04976 DMSO reductase anchor subunit (DmsC) PCI15_RS15825 PF13247 4Fe-4S dicluster domain PCI15_RS15825 PF12800 4Fe-4S binding domain PCI15_RS15830 PF00384 Molybdopterin oxidoreductase PCI15_RS15830 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PCI15_RS15830 PF01568 Molydopterin dinucleotide binding domain PCI15_RS15835 PF01925 Sulfite exporter TauE/SafE PCI15_RS15840 PF12556 Cobaltochelatase CobS subunit N terminal PCI15_RS15840 PF08406 CbbQ/NirQ/NorQ C-terminal PCI15_RS15840 PF07728 AAA domain (dynein-related subfamily) PCI15_RS15845 PF06213 Cobalamin biosynthesis protein CobT PCI15_RS15845 PF11775 Cobalamin biosynthesis protein CobT VWA domain PCI15_RS15850 PF11944 Protein of unknown function (DUF3461) PCI15_RS15855 PF00149 Calcineurin-like phosphoesterase PCI15_RS15860 PF00582 Universal stress protein family PCI15_RS15865 PF01970 Tripartite tricarboxylate transporter TctA family PCI15_RS15875 PF01047 MarR family PCI15_RS15875 PF00480 ROK family PCI15_RS15885 PF04055 Radical SAM superfamily PCI15_RS15885 PF13186 Iron-sulfur cluster-binding domain PCI15_RS15890 PF00884 Sulfatase PCI15_RS15890 PF12411 Choline sulfatase enzyme C terminal PCI15_RS15895 PF03401 Tripartite tricarboxylate transporter family receptor PCI15_RS15900 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS15915 PF01614 Bacterial transcriptional regulator PCI15_RS15915 PF09339 IclR helix-turn-helix domain PCI15_RS15920 PF05199 GMC oxidoreductase PCI15_RS15920 PF00732 GMC oxidoreductase PCI15_RS15925 PF00155 Aminotransferase class I and II PCI15_RS15925 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS15930 PF00282 Pyridoxal-dependent decarboxylase conserved domain PCI15_RS15935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS15935 PF03466 LysR substrate binding domain PCI15_RS15940 PF00815 Histidinol dehydrogenase PCI15_RS15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS15955 PF03466 LysR substrate binding domain PCI15_RS15960 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PCI15_RS15960 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PCI15_RS15965 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS15965 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS15965 PF16350 FAD dependent oxidoreductase central domain PCI15_RS15965 PF01266 FAD dependent oxidoreductase PCI15_RS15970 PF01012 Electron transfer flavoprotein domain PCI15_RS15970 PF00766 Electron transfer flavoprotein FAD-binding domain PCI15_RS15975 PF01012 Electron transfer flavoprotein domain PCI15_RS15985 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS15995 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS15995 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS16000 PF00582 Universal stress protein family PCI15_RS16015 PF02696 Uncharacterized ACR, YdiU/UPF0061 family PCI15_RS16020 PF04333 MlaA lipoprotein PCI15_RS16030 PF11898 Domain of unknown function (DUF3418) PCI15_RS16030 PF04408 Helicase associated domain (HA2) PCI15_RS16030 PF00271 Helicase conserved C-terminal domain PCI15_RS16030 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PCI15_RS16030 PF00270 DEAD/DEAH box helicase PCI15_RS16035 PF13230 Glutamine amidotransferases class-II PCI15_RS16045 PF01551 Peptidase family M23 PCI15_RS16045 PF04225 Opacity-associated protein A LysM-like domain PCI15_RS16055 PF03641 Possible lysine decarboxylase PCI15_RS16055 PF11892 Domain of unknown function (DUF3412) PCI15_RS16055 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases PCI15_RS16060 PF13638 PIN domain PCI15_RS16060 PF02562 PhoH-like protein PCI15_RS16065 PF01809 Putative membrane protein insertion efficiency factor PCI15_RS16075 PF01339 CheB methylesterase PCI15_RS16075 PF00072 Response regulator receiver domain PCI15_RS16080 PF00072 Response regulator receiver domain PCI15_RS16085 PF00924 Mechanosensitive ion channel PCI15_RS16085 PF05552 Conserved TM helix PCI15_RS16090 PF00271 Helicase conserved C-terminal domain PCI15_RS16090 PF04851 Type III restriction enzyme, res subunit PCI15_RS16100 PF00462 Glutaredoxin PCI15_RS16100 PF08534 Redoxin PCI15_RS16110 PF03591 AzlC protein PCI15_RS16135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS16135 PF03466 LysR substrate binding domain PCI15_RS16140 PF03358 NADPH-dependent FMN reductase PCI15_RS16145 PF01292 Prokaryotic cytochrome b561 PCI15_RS16150 PF04264 YceI-like domain PCI15_RS16155 PF00313 'Cold-shock' DNA-binding domain PCI15_RS16160 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) PCI15_RS16165 PF00313 'Cold-shock' DNA-binding domain PCI15_RS16175 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS16175 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS16175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS16180 PF02954 Bacterial regulatory protein, Fis family PCI15_RS16180 PF00072 Response regulator receiver domain PCI15_RS16180 PF00158 Sigma-54 interaction domain PCI15_RS16185 PF10415 Fumarase C C-terminus PCI15_RS16185 PF00206 Lyase PCI15_RS16190 PF00375 Sodium:dicarboxylate symporter family PCI15_RS16210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PCI15_RS16210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PCI15_RS16220 PF02347 Glycine cleavage system P-protein PCI15_RS16225 PF01597 Glycine cleavage H-protein PCI15_RS16230 PF00464 Serine hydroxymethyltransferase PCI15_RS16235 PF03313 Serine dehydratase alpha chain PCI15_RS16235 PF03315 Serine dehydratase beta chain PCI15_RS16245 PF01235 Sodium:alanine symporter family PCI15_RS16250 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS16250 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS16255 PF04055 Radical SAM superfamily PCI15_RS16260 PF00842 Alanine racemase, C-terminal domain PCI15_RS16260 PF01168 Alanine racemase, N-terminal domain PCI15_RS16265 PF01042 Endoribonuclease L-PSP PCI15_RS16270 PF01266 FAD dependent oxidoreductase PCI15_RS16275 PF01037 Lrp/AsnC ligand binding domain PCI15_RS16280 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS16290 PF00202 Aminotransferase class-III PCI15_RS16300 PF01568 Molydopterin dinucleotide binding domain PCI15_RS16300 PF00384 Molybdopterin oxidoreductase PCI15_RS16300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PCI15_RS16305 PF02743 Cache domain PCI15_RS16305 PF00672 HAMP domain PCI15_RS16305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS16315 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS16320 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS16325 PF00005 ABC transporter PCI15_RS16325 PF08402 TOBE domain PCI15_RS16335 PF00202 Aminotransferase class-III PCI15_RS16345 PF01810 LysE type translocator PCI15_RS16350 PF03956 Lysine exporter LysO PCI15_RS16355 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS16355 PF00072 Response regulator receiver domain PCI15_RS16360 PF00271 Helicase conserved C-terminal domain PCI15_RS16360 PF00270 DEAD/DEAH box helicase PCI15_RS16365 PF12137 RNA polymerase recycling family C-terminal PCI15_RS16365 PF00176 SNF2 family N-terminal domain PCI15_RS16365 PF18339 RapA N-terminal Tudor like domain 1 PCI15_RS16365 PF18337 RapA N-terminal Tudor like domain PCI15_RS16365 PF00271 Helicase conserved C-terminal domain PCI15_RS16370 PF00270 DEAD/DEAH box helicase PCI15_RS16370 PF00271 Helicase conserved C-terminal domain PCI15_RS16375 PF00682 HMGL-like PCI15_RS16375 PF08502 LeuA allosteric (dimerisation) domain PCI15_RS16380 PF01037 Lrp/AsnC ligand binding domain PCI15_RS16390 PF08238 Sel1 repeat PCI15_RS16400 PF12105 SpoU, rRNA methylase, C-terminal PCI15_RS16400 PF00588 SpoU rRNA Methylase family PCI15_RS16405 PF00800 Prephenate dehydratase PCI15_RS16405 PF01817 Chorismate mutase type II PCI15_RS16415 PF00072 Response regulator receiver domain PCI15_RS16415 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS16420 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS16420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS16420 PF08521 Two-component sensor kinase N-terminal PCI15_RS16425 PF02321 Outer membrane efflux protein PCI15_RS16435 PF00873 AcrB/AcrD/AcrF family PCI15_RS16440 PF00072 Response regulator receiver domain PCI15_RS16440 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS16445 PF12833 Helix-turn-helix domain PCI15_RS16465 PF04199 Putative cyclase PCI15_RS16480 PF08719 Domain of unknown function (DUF1768) PCI15_RS16500 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS16505 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS16510 PF00005 ABC transporter PCI15_RS16510 PF17912 MalK OB fold domain PCI15_RS16515 PF00005 ABC transporter PCI15_RS16515 PF08402 TOBE domain PCI15_RS16520 PF00158 Sigma-54 interaction domain PCI15_RS16520 PF01590 GAF domain PCI15_RS16520 PF02954 Bacterial regulatory protein, Fis family PCI15_RS16525 PF02673 Bacitracin resistance protein BacA PCI15_RS16540 PF07664 Ferrous iron transport protein B C terminus PCI15_RS16540 PF17910 FeoB cytosolic helical domain PCI15_RS16540 PF02421 Ferrous iron transport protein B PCI15_RS16540 PF07670 Nucleoside recognition PCI15_RS16550 PF00672 HAMP domain PCI15_RS16550 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS16550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS16555 PF00072 Response regulator receiver domain PCI15_RS16555 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS16560 PF01381 Helix-turn-helix PCI15_RS16590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PCI15_RS16590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PCI15_RS16595 PF08220 DeoR-like helix-turn-helix domain PCI15_RS16595 PF00455 DeoR C terminal sensor domain PCI15_RS16600 PF01266 FAD dependent oxidoreductase PCI15_RS16600 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PCI15_RS16605 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PCI15_RS16605 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PCI15_RS16610 PF02887 Pyruvate kinase, alpha/beta domain PCI15_RS16610 PF00224 Pyruvate kinase, barrel domain PCI15_RS16620 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS16620 PF00585 C-terminal regulatory domain of Threonine dehydratase PCI15_RS16640 PF07690 Major Facilitator Superfamily PCI15_RS16645 PF04461 Protein of unknown function (DUF520) PCI15_RS16650 PF08546 Ketopantoate reductase PanE/ApbA C terminal PCI15_RS16650 PF02558 Ketopantoate reductase PanE/ApbA PCI15_RS16655 PF03976 Polyphosphate kinase 2 (PPK2) PCI15_RS16660 PF01923 Cobalamin adenosyltransferase PCI15_RS16675 PF02277 Phosphoribosyltransferase PCI15_RS16680 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PCI15_RS16700 PF01784 NIF3 (NGG1p interacting factor 3) PCI15_RS16705 PF13180 PDZ domain PCI15_RS16710 PF01053 Cys/Met metabolism PLP-dependent enzyme PCI15_RS16725 PF17837 4'-phosphopantetheinyl transferase N-terminal domain PCI15_RS16725 PF01648 4'-phosphopantetheinyl transferase superfamily PCI15_RS16730 PF00501 AMP-binding enzyme PCI15_RS16730 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS16735 PF00975 Thioesterase domain PCI15_RS16745 PF00550 Phosphopantetheine attachment site PCI15_RS16745 PF00501 AMP-binding enzyme PCI15_RS16745 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS16745 PF00668 Condensation domain PCI15_RS16750 PF08242 Methyltransferase domain PCI15_RS16750 PF00668 Condensation domain PCI15_RS16750 PF00501 AMP-binding enzyme PCI15_RS16750 PF00550 Phosphopantetheine attachment site PCI15_RS16755 PF07690 Major Facilitator Superfamily PCI15_RS16760 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS16760 PF00593 TonB dependent receptor PCI15_RS16765 PF12833 Helix-turn-helix domain PCI15_RS16765 PF14525 AraC-binding-like domain PCI15_RS16770 PF00005 ABC transporter PCI15_RS16770 PF00664 ABC transporter transmembrane region PCI15_RS16775 PF00005 ABC transporter PCI15_RS16775 PF00664 ABC transporter transmembrane region PCI15_RS16780 PF12833 Helix-turn-helix domain PCI15_RS16780 PF02311 AraC-like ligand binding domain PCI15_RS16795 PF02574 Homocysteine S-methyltransferase PCI15_RS16795 PF02219 Methylenetetrahydrofolate reductase PCI15_RS16805 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS16805 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS16805 PF00563 EAL domain PCI15_RS16810 PF02743 Cache domain PCI15_RS16810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS16810 PF00672 HAMP domain PCI15_RS16820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS16820 PF00672 HAMP domain PCI15_RS16825 PF01844 HNH endonuclease PCI15_RS16845 PF07969 Amidohydrolase family PCI15_RS16865 PF00313 'Cold-shock' DNA-binding domain PCI15_RS16870 PF03466 LysR substrate binding domain PCI15_RS16870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS16875 PF00106 short chain dehydrogenase PCI15_RS16910 PF12833 Helix-turn-helix domain PCI15_RS16910 PF02311 AraC-like ligand binding domain PCI15_RS16915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PCI15_RS16915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PCI15_RS16920 PF00266 Aminotransferase class-V PCI15_RS16925 PF00034 Cytochrome c PCI15_RS16935 PF07729 FCD domain PCI15_RS16935 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS16945 PF01842 ACT domain PCI15_RS16945 PF00800 Prephenate dehydratase PCI15_RS16960 PF01037 Lrp/AsnC ligand binding domain PCI15_RS16970 PF01557 Fumarylacetoacetate (FAA) hydrolase family PCI15_RS16975 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS16975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS16985 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS17000 PF16123 Hydroxyacylglutathione hydrolase C-terminus PCI15_RS17000 PF00753 Metallo-beta-lactamase superfamily PCI15_RS17005 PF01212 Beta-eliminating lyase PCI15_RS17020 PF00171 Aldehyde dehydrogenase family PCI15_RS17025 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PCI15_RS17030 PF00171 Aldehyde dehydrogenase family PCI15_RS17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS17035 PF03466 LysR substrate binding domain PCI15_RS17080 PF12008 Type I restriction and modification enzyme - subunit R C terminal PCI15_RS17080 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PCI15_RS17080 PF18766 SWI2/SNF2 ATPase PCI15_RS17090 PF02384 N-6 DNA Methylase PCI15_RS17090 PF12161 HsdM N-terminal domain PCI15_RS17095 PF14338 Mrr N-terminal domain PCI15_RS17095 PF04471 Restriction endonuclease PCI15_RS17115 PF00216 Bacterial DNA-binding protein PCI15_RS17120 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PCI15_RS17120 PF03483 B3/4 domain PCI15_RS17120 PF03147 Ferredoxin-fold anticodon binding domain PCI15_RS17120 PF01588 Putative tRNA binding domain PCI15_RS17120 PF03484 tRNA synthetase B5 domain PCI15_RS17125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PCI15_RS17125 PF01409 tRNA synthetases class II core domain (F) PCI15_RS17130 PF00453 Ribosomal protein L20 PCI15_RS17135 PF01632 Ribosomal protein L35 PCI15_RS17140 PF05198 Translation initiation factor IF-3, N-terminal domain PCI15_RS17140 PF00707 Translation initiation factor IF-3, C-terminal domain PCI15_RS17145 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PCI15_RS17145 PF02824 TGS domain PCI15_RS17145 PF03129 Anticodon binding domain PCI15_RS17145 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PCI15_RS17150 PF13185 GAF domain PCI15_RS17165 PF00199 Catalase PCI15_RS17170 PF01047 MarR family PCI15_RS17180 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS17180 PF07729 FCD domain PCI15_RS17185 PF02754 Cysteine-rich domain PCI15_RS17190 PF11870 Domain of unknown function (DUF3390) PCI15_RS17190 PF13183 4Fe-4S dicluster domain PCI15_RS17190 PF02589 LUD domain PCI15_RS17195 PF02589 LUD domain PCI15_RS17210 PF00317 Ribonucleotide reductase, all-alpha domain PCI15_RS17210 PF03477 ATP cone domain PCI15_RS17210 PF02867 Ribonucleotide reductase, barrel domain PCI15_RS17215 PF00700 Bacterial flagellin C-terminal helical region PCI15_RS17215 PF00669 Bacterial flagellin N-terminal helical region PCI15_RS17215 PF00700 Bacterial flagellin C-terminal helical region PCI15_RS17215 PF00669 Bacterial flagellin N-terminal helical region PCI15_RS17235 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system PCI15_RS17240 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PCI15_RS17250 PF03193 RsgA GTPase PCI15_RS17260 PF01638 HxlR-like helix-turn-helix PCI15_RS17265 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS17265 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS17270 PF06253 Trimethylamine methyltransferase (MTTB) PCI15_RS17275 PF03466 LysR substrate binding domain PCI15_RS17275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS17290 PF00271 Helicase conserved C-terminal domain PCI15_RS17290 PF00270 DEAD/DEAH box helicase PCI15_RS17295 PF06796 Periplasmic nitrate reductase protein NapE PCI15_RS17300 PF12800 4Fe-4S binding domain PCI15_RS17300 PF00037 4Fe-4S binding domain PCI15_RS17300 PF13187 4Fe-4S dicluster domain PCI15_RS17310 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PCI15_RS17310 PF00384 Molybdopterin oxidoreductase PCI15_RS17310 PF01568 Molydopterin dinucleotide binding domain PCI15_RS17310 PF10518 TAT (twin-arginine translocation) pathway signal sequence PCI15_RS17315 PF12800 4Fe-4S binding domain PCI15_RS17315 PF12838 4Fe-4S dicluster domain PCI15_RS17320 PF12837 4Fe-4S binding domain PCI15_RS17320 PF12801 4Fe-4S binding domain PCI15_RS17325 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) PCI15_RS17330 PF03264 NapC/NirT cytochrome c family, N-terminal region PCI15_RS17335 PF01268 Formate--tetrahydrofolate ligase PCI15_RS17345 PF00563 EAL domain PCI15_RS17345 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS17345 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS17350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS17350 PF03466 LysR substrate binding domain PCI15_RS17355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PCI15_RS17355 PF00005 ABC transporter PCI15_RS17360 PF12911 N-terminal TM domain of oligopeptide transport permease C PCI15_RS17360 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS17365 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS17370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PCI15_RS17385 PF05661 Protein of unknown function (DUF808) PCI15_RS17390 PF07729 FCD domain PCI15_RS17390 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS17400 PF00593 TonB dependent receptor PCI15_RS17400 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS17405 PF01497 Periplasmic binding protein PCI15_RS17410 PF01032 FecCD transport family PCI15_RS17415 PF01032 FecCD transport family PCI15_RS17420 PF00005 ABC transporter PCI15_RS17430 PF13419 Haloacid dehalogenase-like hydrolase PCI15_RS17435 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS17440 PF00005 ABC transporter PCI15_RS17450 PF05721 Phytanoyl-CoA dioxygenase (PhyH) PCI15_RS17455 PF01966 HD domain PCI15_RS17465 PF00563 EAL domain PCI15_RS17465 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS17465 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS17470 PF07702 UTRA domain PCI15_RS17470 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS17475 PF00136 DNA polymerase family B PCI15_RS17475 PF03104 DNA polymerase family B, exonuclease domain PCI15_RS17495 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal PCI15_RS17495 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal PCI15_RS17500 PF01070 FMN-dependent dehydrogenase PCI15_RS17520 PF00764 Arginosuccinate synthase PCI15_RS17530 PF00929 Exonuclease PCI15_RS17535 PF07690 Major Facilitator Superfamily PCI15_RS17540 PF10417 C-terminal domain of 1-Cys peroxiredoxin PCI15_RS17540 PF00578 AhpC/TSA family PCI15_RS17545 PF00462 Glutaredoxin PCI15_RS17550 PF00202 Aminotransferase class-III PCI15_RS17555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PCI15_RS17555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PCI15_RS17560 PF03466 LysR substrate binding domain PCI15_RS17560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS17570 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS17570 PF08448 PAS fold PCI15_RS17575 PF02627 Carboxymuconolactone decarboxylase family PCI15_RS17590 PF00171 Aldehyde dehydrogenase family PCI15_RS17610 PF12697 Alpha/beta hydrolase family PCI15_RS17615 PF01613 Flavin reductase like domain PCI15_RS17620 PF00296 Luciferase-like monooxygenase PCI15_RS17625 PF00171 Aldehyde dehydrogenase family PCI15_RS17630 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS17635 PF13378 Enolase C-terminal domain-like PCI15_RS17635 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PCI15_RS17640 PF00596 Class II Aldolase and Adducin N-terminal domain PCI15_RS17645 PF01474 Class-II DAHP synthetase family PCI15_RS17665 PF07556 Protein of unknown function (DUF1538) PCI15_RS17670 PF07556 Protein of unknown function (DUF1538) PCI15_RS17680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS17680 PF03466 LysR substrate binding domain PCI15_RS17685 PF01618 MotA/TolQ/ExbB proton channel family PCI15_RS17705 PF00593 TonB dependent receptor PCI15_RS17705 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS17710 PF01070 FMN-dependent dehydrogenase PCI15_RS17715 PF13640 2OG-Fe(II) oxygenase superfamily PCI15_RS17715 PF18331 PKHD-type hydroxylase C-terminal domain PCI15_RS17735 PF00478 IMP dehydrogenase / GMP reductase domain PCI15_RS17735 PF00571 CBS domain PCI15_RS17745 PF00881 Nitroreductase family PCI15_RS17760 PF05683 Fumarase C-terminus PCI15_RS17760 PF05681 Fumarate hydratase (Fumerase) PCI15_RS17765 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS17775 PF01136 Peptidase family U32 PCI15_RS17775 PF16325 Peptidase family U32 C-terminal domain PCI15_RS17790 PF00557 Metallopeptidase family M24 PCI15_RS17795 PF03466 LysR substrate binding domain PCI15_RS17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS17800 PF00246 Zinc carboxypeptidase PCI15_RS17800 PF18027 Cytosolic carboxypeptidase N-terminal domain PCI15_RS17805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PCI15_RS17805 PF00005 ABC transporter PCI15_RS17810 PF00005 ABC transporter PCI15_RS17810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PCI15_RS17815 PF12911 N-terminal TM domain of oligopeptide transport permease C PCI15_RS17815 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS17820 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS17825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PCI15_RS17835 PF01266 FAD dependent oxidoreductase PCI15_RS17855 PF16868 NMT1-like family PCI15_RS17860 PF07729 FCD domain PCI15_RS17860 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS17870 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PCI15_RS17870 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PCI15_RS17875 PF00596 Class II Aldolase and Adducin N-terminal domain PCI15_RS17880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PCI15_RS17890 PF06253 Trimethylamine methyltransferase (MTTB) PCI15_RS17895 PF01965 DJ-1/PfpI family PCI15_RS17895 PF12833 Helix-turn-helix domain PCI15_RS17910 PF00809 Pterin binding enzyme PCI15_RS17920 PF02607 B12 binding domain PCI15_RS17920 PF02310 B12 binding domain PCI15_RS17935 PF01968 Hydantoinase/oxoprolinase PCI15_RS17935 PF05378 Hydantoinase/oxoprolinase N-terminal region PCI15_RS17945 PF04237 YjbR PCI15_RS17950 PF06445 GyrI-like small molecule binding domain PCI15_RS17950 PF12833 Helix-turn-helix domain PCI15_RS17955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS17955 PF03466 LysR substrate binding domain PCI15_RS17960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS17970 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS17975 PF01321 Creatinase/Prolidase N-terminal domain PCI15_RS17975 PF00557 Metallopeptidase family M24 PCI15_RS17980 PF13673 Acetyltransferase (GNAT) domain PCI15_RS17985 PF00583 Acetyltransferase (GNAT) family PCI15_RS17995 PF01593 Flavin containing amine oxidoreductase PCI15_RS18005 PF08281 Sigma-70, region 4 PCI15_RS18005 PF04542 Sigma-70 region 2 PCI15_RS18015 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PCI15_RS18025 PF05199 GMC oxidoreductase PCI15_RS18025 PF00732 GMC oxidoreductase PCI15_RS18030 PF14497 Glutathione S-transferase, C-terminal domain PCI15_RS18030 PF02798 Glutathione S-transferase, N-terminal domain PCI15_RS18035 PF00155 Aminotransferase class I and II PCI15_RS18045 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PCI15_RS18050 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PCI15_RS18060 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS18070 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS18070 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS18075 PF03466 LysR substrate binding domain PCI15_RS18080 PF00351 Biopterin-dependent aromatic amino acid hydroxylase PCI15_RS18095 PF03190 Protein of unknown function, DUF255 PCI15_RS18100 PF01070 FMN-dependent dehydrogenase PCI15_RS18105 PF00403 Heavy-metal-associated domain PCI15_RS18110 PF13411 MerR HTH family regulatory protein PCI15_RS18115 PF01258 Prokaryotic dksA/traR C4-type zinc finger PCI15_RS18120 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PCI15_RS18120 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PCI15_RS18135 PF00034 Cytochrome c PCI15_RS18140 PF00873 AcrB/AcrD/AcrF family PCI15_RS18170 PF18030 RimK PreATP-grasp domain PCI15_RS18170 PF08443 RimK-like ATP-grasp domain PCI15_RS18195 PF00437 Type II/IV secretion system protein PCI15_RS18225 PF00263 Bacterial type II and III secretion system protein PCI15_RS18225 PF04972 BON domain PCI15_RS18225 PF13629 Pilus formation protein N terminal region PCI15_RS18250 PF02311 AraC-like ligand binding domain PCI15_RS18250 PF12833 Helix-turn-helix domain PCI15_RS18255 PF01047 MarR family PCI15_RS18265 PF02566 OsmC-like protein PCI15_RS18280 PF00043 Glutathione S-transferase, C-terminal domain PCI15_RS18280 PF02798 Glutathione S-transferase, N-terminal domain PCI15_RS18285 PF03466 LysR substrate binding domain PCI15_RS18285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS18300 PF00313 'Cold-shock' DNA-binding domain PCI15_RS18305 PF04102 SlyX PCI15_RS18310 PF04445 Putative SAM-dependent methyltransferase PCI15_RS18315 PF02673 Bacitracin resistance protein BacA PCI15_RS18320 PF00814 Glycoprotease family PCI15_RS18325 PF02441 Flavoprotein PCI15_RS18330 PF02875 Mur ligase family, glutamate ligase domain PCI15_RS18330 PF01225 Mur ligase family, catalytic domain PCI15_RS18330 PF08245 Mur ligase middle domain PCI15_RS18335 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain PCI15_RS18340 PF00719 Inorganic pyrophosphatase PCI15_RS18355 PF00202 Aminotransferase class-III PCI15_RS18360 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS18360 PF07729 FCD domain PCI15_RS18380 PF00691 OmpA family PCI15_RS18380 PF05736 OprF membrane domain PCI15_RS18400 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS18400 PF00072 Response regulator receiver domain PCI15_RS18405 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion PCI15_RS18405 PF00529 HlyD membrane-fusion protein of T1SS PCI15_RS18410 PF00005 ABC transporter PCI15_RS18410 PF03412 Peptidase C39 family PCI15_RS18410 PF00664 ABC transporter transmembrane region PCI15_RS18430 PF00091 Tubulin/FtsZ family, GTPase domain PCI15_RS18430 PF12327 FtsZ family, C-terminal domain PCI15_RS18435 PF02491 SHS2 domain inserted in FTSA PCI15_RS18445 PF02646 RmuC family PCI15_RS18470 PF13617 YnbE-like lipoprotein PCI15_RS18475 PF07027 Protein of unknown function (DUF1318) PCI15_RS18505 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PCI15_RS18515 PF00881 Nitroreductase family PCI15_RS18520 PF14489 QueF-like protein PCI15_RS18520 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term PCI15_RS18525 PF01061 ABC-2 type transporter PCI15_RS18530 PF00005 ABC transporter PCI15_RS18540 PF00563 EAL domain PCI15_RS18540 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS18540 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS18585 PF00563 EAL domain PCI15_RS18585 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS18585 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS18590 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS18590 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS18590 PF00563 EAL domain PCI15_RS18600 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PCI15_RS18600 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PCI15_RS18600 PF06827 Zinc finger found in FPG and IleRS PCI15_RS18605 PF00471 Ribosomal protein L33 PCI15_RS18610 PF00830 Ribosomal L28 family PCI15_RS18615 PF04002 RadC-like JAB domain PCI15_RS18620 PF02441 Flavoprotein PCI15_RS18620 PF04127 DNA / pantothenate metabolism flavoprotein PCI15_RS18625 PF00692 dUTPase PCI15_RS18630 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PCI15_RS18630 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PCI15_RS18630 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PCI15_RS18630 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PCI15_RS18635 PF00696 Amino acid kinase family PCI15_RS18640 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS18650 PF04748 Divergent polysaccharide deacetylase PCI15_RS18655 PF13180 PDZ domain PCI15_RS18655 PF03572 Peptidase family S41 PCI15_RS18660 PF01551 Peptidase family M23 PCI15_RS18665 PF01676 Metalloenzyme superfamily PCI15_RS18665 PF06415 BPG-independent PGAM N-terminus (iPGM_N) PCI15_RS18670 PF00581 Rhodanese-like domain PCI15_RS18675 PF00462 Glutaredoxin PCI15_RS18680 PF02556 Preprotein translocase subunit SecB PCI15_RS18695 PF00588 SpoU rRNA Methylase family PCI15_RS18700 PF00158 Sigma-54 interaction domain PCI15_RS18700 PF00072 Response regulator receiver domain PCI15_RS18700 PF02954 Bacterial regulatory protein, Fis family PCI15_RS18705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS18705 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS18705 PF00989 PAS fold PCI15_RS18715 PF03951 Glutamine synthetase, beta-Grasp domain PCI15_RS18715 PF00120 Glutamine synthetase, catalytic domain PCI15_RS18720 PF00009 Elongation factor Tu GTP binding domain PCI15_RS18720 PF03144 Elongation factor Tu domain 2 PCI15_RS18720 PF00679 Elongation factor G C-terminus PCI15_RS18725 PF00561 alpha/beta hydrolase fold PCI15_RS18730 PF03553 Na+/H+ antiporter family PCI15_RS18735 PF02580 D-Tyr-tRNA(Tyr) deacylase PCI15_RS18745 PF00202 Aminotransferase class-III PCI15_RS18755 PF00384 Molybdopterin oxidoreductase PCI15_RS18760 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS18770 PF01042 Endoribonuclease L-PSP PCI15_RS18775 PF01042 Endoribonuclease L-PSP PCI15_RS18780 PF13380 CoA binding domain PCI15_RS18785 PF00899 ThiF family PCI15_RS18790 PF13847 Methyltransferase domain PCI15_RS18790 PF17827 PrmC N-terminal domain PCI15_RS18795 PF00472 RF-1 domain PCI15_RS18795 PF03462 PCRF domain PCI15_RS18800 PF01488 Shikimate / quinate 5-dehydrogenase PCI15_RS18800 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PCI15_RS18800 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PCI15_RS18810 PF03550 Outer membrane lipoprotein LolB PCI15_RS18820 PF14572 Phosphoribosyl synthetase-associated domain PCI15_RS18820 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PCI15_RS18825 PF01386 Ribosomal L25p family PCI15_RS18825 PF14693 Ribosomal protein TL5, C-terminal domain PCI15_RS18830 PF01195 Peptidyl-tRNA hydrolase PCI15_RS18835 PF01926 50S ribosome-binding GTPase PCI15_RS18835 PF06071 Protein of unknown function (DUF933) PCI15_RS18870 PF00563 EAL domain PCI15_RS18870 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS18870 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS18880 PF00171 Aldehyde dehydrogenase family PCI15_RS18885 PF05199 GMC oxidoreductase PCI15_RS18885 PF00732 GMC oxidoreductase PCI15_RS18890 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PCI15_RS18895 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS18900 PF00571 CBS domain PCI15_RS18900 PF00005 ABC transporter PCI15_RS18905 PF03253 Urea transporter PCI15_RS18910 PF00563 EAL domain PCI15_RS18910 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS18910 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS18915 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PCI15_RS18920 PF12411 Choline sulfatase enzyme C terminal PCI15_RS18920 PF00884 Sulfatase PCI15_RS18925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS18925 PF03466 LysR substrate binding domain PCI15_RS18930 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS18930 PF13977 BetI-type transcriptional repressor, C-terminal PCI15_RS18935 PF00575 S1 RNA binding domain PCI15_RS18935 PF08206 Ribonuclease B OB domain PCI15_RS18935 PF08461 Ribonuclease R winged-helix domain PCI15_RS18935 PF17876 Cold shock domain PCI15_RS18935 PF00773 RNB domain PCI15_RS18940 PF02355 Protein export membrane protein PCI15_RS18940 PF07549 SecD/SecF GG Motif PCI15_RS18945 PF07549 SecD/SecF GG Motif PCI15_RS18945 PF13721 SecD export protein N-terminal TM region PCI15_RS18945 PF02355 Protein export membrane protein PCI15_RS18950 PF02699 Preprotein translocase subunit PCI15_RS18955 PF01702 Queuine tRNA-ribosyltransferase PCI15_RS18960 PF02547 Queuosine biosynthesis protein PCI15_RS18970 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS18995 PF13356 Arm DNA-binding domain PCI15_RS18995 PF00589 Phage integrase family PCI15_RS19050 PF03497 Anthrax toxin LF subunit PCI15_RS19050 PF06594 Haemolysin-type calcium binding protein related domain PCI15_RS19050 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) PCI15_RS19050 PF02382 N-terminal domain in RTX protein PCI15_RS19060 PF03412 Peptidase C39 family PCI15_RS19060 PF00005 ABC transporter PCI15_RS19060 PF00664 ABC transporter transmembrane region PCI15_RS19070 PF00664 ABC transporter transmembrane region PCI15_RS19070 PF00005 ABC transporter PCI15_RS19070 PF03412 Peptidase C39 family PCI15_RS19080 PF07969 Amidohydrolase family PCI15_RS19090 PF03466 LysR substrate binding domain PCI15_RS19090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PCI15_RS19095 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS19105 PF00072 Response regulator receiver domain PCI15_RS19105 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS19110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS19110 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS19110 PF00989 PAS fold PCI15_RS19110 PF16736 Single Cache-like PCI15_RS19130 PF13185 GAF domain PCI15_RS19130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS19130 PF07730 Histidine kinase PCI15_RS19135 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS19135 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PCI15_RS19150 PF00510 Cytochrome c oxidase subunit III PCI15_RS19160 PF00258 Flavodoxin PCI15_RS19160 PF00175 Oxidoreductase NAD-binding domain PCI15_RS19160 PF00667 FAD binding domain PCI15_RS19170 PF01554 MatE PCI15_RS19180 PF00107 Zinc-binding dehydrogenase PCI15_RS19180 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS19185 PF07729 FCD domain PCI15_RS19185 PF00392 Bacterial regulatory proteins, gntR family PCI15_RS19190 PF12796 Ankyrin repeats (3 copies) PCI15_RS19195 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS19200 PF01638 HxlR-like helix-turn-helix PCI15_RS19210 PF03358 NADPH-dependent FMN reductase PCI15_RS19215 PF00498 FHA domain PCI15_RS19215 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS19215 PF00563 EAL domain PCI15_RS19225 PF00072 Response regulator receiver domain PCI15_RS19225 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS19230 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS19230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS19245 PF00873 AcrB/AcrD/AcrF family PCI15_RS19255 PF00106 short chain dehydrogenase PCI15_RS19275 PF06693 Protein of unknown function (DUF1190) PCI15_RS19280 PF03738 Glutathionylspermidine synthase preATP-grasp PCI15_RS19290 PF00593 TonB dependent receptor PCI15_RS19290 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS19300 PF04542 Sigma-70 region 2 PCI15_RS19300 PF08281 Sigma-70, region 4 PCI15_RS19315 PF08447 PAS fold PCI15_RS19315 PF08447 PAS fold PCI15_RS19315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS19315 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS19320 PF01266 FAD dependent oxidoreductase PCI15_RS19330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS19330 PF00672 HAMP domain PCI15_RS19335 PF03150 Di-haem cytochrome c peroxidase PCI15_RS19335 PF00034 Cytochrome c PCI15_RS19340 PF00563 EAL domain PCI15_RS19340 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS19340 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS19345 PF00892 EamA-like transporter family PCI15_RS19350 PF00596 Class II Aldolase and Adducin N-terminal domain PCI15_RS19355 PF01970 Tripartite tricarboxylate transporter TctA family PCI15_RS19370 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain PCI15_RS19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS19370 PF17203 Single cache domain 3 PCI15_RS19370 PF00989 PAS fold PCI15_RS19375 PF00072 Response regulator receiver domain PCI15_RS19375 PF12431 Transcriptional regulator PCI15_RS19375 PF08279 HTH domain PCI15_RS19385 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region PCI15_RS19385 PF01243 Pyridoxamine 5'-phosphate oxidase PCI15_RS19405 PF00263 Bacterial type II and III secretion system protein PCI15_RS19405 PF03958 Bacterial type II/III secretion system short domain PCI15_RS19460 PF00482 Type II secretion system (T2SS), protein F PCI15_RS19465 PF00437 Type II/IV secretion system protein PCI15_RS19465 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain PCI15_RS19470 PF07963 Prokaryotic N-terminal methylation motif PCI15_RS19470 PF08334 Type II secretion system (T2SS), protein G PCI15_RS19495 PF01053 Cys/Met metabolism PLP-dependent enzyme PCI15_RS19525 PF03466 LysR substrate binding domain PCI15_RS19525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19530 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS19530 PF01266 FAD dependent oxidoreductase PCI15_RS19530 PF16350 FAD dependent oxidoreductase central domain PCI15_RS19530 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS19540 PF00005 ABC transporter PCI15_RS19545 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS19550 PF03466 LysR substrate binding domain PCI15_RS19550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19570 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB PCI15_RS19575 PF00583 Acetyltransferase (GNAT) family PCI15_RS19575 PF00795 Carbon-nitrogen hydrolase PCI15_RS19585 PF03466 LysR substrate binding domain PCI15_RS19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19605 PF12833 Helix-turn-helix domain PCI15_RS19605 PF01965 DJ-1/PfpI family PCI15_RS19615 PF00701 Dihydrodipicolinate synthetase family PCI15_RS19620 PF13411 MerR HTH family regulatory protein PCI15_RS19635 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS19640 PF03466 LysR substrate binding domain PCI15_RS19640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19645 PF00491 Arginase family PCI15_RS19655 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS19655 PF00107 Zinc-binding dehydrogenase PCI15_RS19660 PF00083 Sugar (and other) transporter PCI15_RS19675 PF00732 GMC oxidoreductase PCI15_RS19675 PF05199 GMC oxidoreductase PCI15_RS19680 PF03466 LysR substrate binding domain PCI15_RS19680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19690 PF12833 Helix-turn-helix domain PCI15_RS19690 PF01965 DJ-1/PfpI family PCI15_RS19695 PF16123 Hydroxyacylglutathione hydrolase C-terminus PCI15_RS19695 PF00753 Metallo-beta-lactamase superfamily PCI15_RS19700 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS19710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PCI15_RS19715 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PCI15_RS19715 PF00355 Rieske [2Fe-2S] domain PCI15_RS19720 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS19725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19725 PF03466 LysR substrate binding domain PCI15_RS19740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19740 PF03466 LysR substrate binding domain PCI15_RS19750 PF00860 Permease family PCI15_RS19755 PF01979 Amidohydrolase family PCI15_RS19765 PF08362 YcdC-like protein, C-terminal region PCI15_RS19765 PF00440 Bacterial regulatory proteins, tetR family PCI15_RS19770 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS19770 PF01799 [2Fe-2S] binding domain PCI15_RS19770 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PCI15_RS19770 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PCI15_RS19775 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain PCI15_RS19775 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase PCI15_RS19785 PF01979 Amidohydrolase family PCI15_RS19790 PF17151 Periplasmic sensor domain PCI15_RS19790 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS19800 PF00860 Permease family PCI15_RS19805 PF01810 LysE type translocator PCI15_RS19810 PF00576 HIUase/Transthyretin family PCI15_RS19820 PF09349 OHCU decarboxylase PCI15_RS19820 PF01014 Uricase PCI15_RS19825 PF03561 Allantoicase repeat PCI15_RS19830 PF04115 Ureidoglycolate lyase PCI15_RS19850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PCI15_RS19850 PF00205 Thiamine pyrophosphate enzyme, central domain PCI15_RS19850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PCI15_RS19865 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS19875 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS19880 PF02954 Bacterial regulatory protein, Fis family PCI15_RS19880 PF00072 Response regulator receiver domain PCI15_RS19880 PF00158 Sigma-54 interaction domain PCI15_RS19885 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS19885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS19885 PF02743 Cache domain PCI15_RS19890 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS19895 PF05552 Conserved TM helix PCI15_RS19895 PF00924 Mechanosensitive ion channel PCI15_RS19910 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PCI15_RS19910 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PCI15_RS19915 PF00005 ABC transporter PCI15_RS19920 PF03929 PepSY-associated TM region PCI15_RS19930 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS19930 PF00593 TonB dependent receptor PCI15_RS19935 PF01810 LysE type translocator PCI15_RS19940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19940 PF03466 LysR substrate binding domain PCI15_RS19945 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS19945 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS19945 PF00563 EAL domain PCI15_RS19950 PF00563 EAL domain PCI15_RS19950 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS19950 PF13426 PAS domain PCI15_RS19955 PF00072 Response regulator receiver domain PCI15_RS19965 PF02798 Glutathione S-transferase, N-terminal domain PCI15_RS19970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS19970 PF03466 LysR substrate binding domain PCI15_RS19975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS19975 PF00672 HAMP domain PCI15_RS19975 PF02743 Cache domain PCI15_RS19990 PF01810 LysE type translocator PCI15_RS19995 PF05175 Methyltransferase small domain PCI15_RS20010 PF00672 HAMP domain PCI15_RS20010 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS20010 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) PCI15_RS20010 PF00072 Response regulator receiver domain PCI15_RS20010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS20010 PF01627 Hpt domain PCI15_RS20025 PF12034 Domain of unknown function (DUF3520) PCI15_RS20025 PF00092 von Willebrand factor type A domain PCI15_RS20025 PF12450 von Willebrand factor PCI15_RS20040 PF11944 Protein of unknown function (DUF3461) PCI15_RS20055 PF03625 Domain of unknown function DUF302 PCI15_RS20055 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PCI15_RS20070 PF02719 Polysaccharide biosynthesis protein PCI15_RS20075 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PCI15_RS20085 PF02350 UDP-N-acetylglucosamine 2-epimerase PCI15_RS20090 PF08666 SAF domain PCI15_RS20090 PF03102 NeuB family PCI15_RS20095 PF02348 Cytidylyltransferase PCI15_RS20115 PF00117 Glutamine amidotransferase class-I PCI15_RS20120 PF00977 Histidine biosynthesis protein PCI15_RS20130 PF00117 Glutamine amidotransferase class-I PCI15_RS20135 PF00977 Histidine biosynthesis protein PCI15_RS20140 PF00733 Asparagine synthase PCI15_RS20140 PF13537 Glutamine amidotransferase domain PCI15_RS20145 PF02397 Bacterial sugar transferase PCI15_RS20160 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PCI15_RS20160 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PCI15_RS20160 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PCI15_RS20165 PF00924 Mechanosensitive ion channel PCI15_RS20185 PF13439 Glycosyltransferase Family 4 PCI15_RS20185 PF00534 Glycosyl transferases group 1 PCI15_RS20195 PF00300 Histidine phosphatase superfamily (branch 1) PCI15_RS20200 PF01370 NAD dependent epimerase/dehydratase family PCI15_RS20205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PCI15_RS20205 PF00005 ABC transporter PCI15_RS20215 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS20220 PF12911 N-terminal TM domain of oligopeptide transport permease C PCI15_RS20220 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS20225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PCI15_RS20225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PCI15_RS20225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PCI15_RS20230 PF05430 S-adenosyl-L-methionine-dependent methyltransferase PCI15_RS20230 PF01266 FAD dependent oxidoreductase PCI15_RS20245 PF06794 Uncharacterised protein family (UPF0270) PCI15_RS20250 PF03120 NAD-dependent DNA ligase OB-fold domain PCI15_RS20250 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PCI15_RS20250 PF12826 Helix-hairpin-helix motif PCI15_RS20250 PF00533 BRCA1 C Terminus (BRCT) domain PCI15_RS20250 PF01653 NAD-dependent DNA ligase adenylation domain PCI15_RS20255 PF04354 ZipA, C-terminal FtsZ-binding domain PCI15_RS20255 PF04354 ZipA, C-terminal FtsZ-binding domain PCI15_RS20265 PF03918 Cytochrome C biogenesis protein PCI15_RS20270 PF08534 Redoxin PCI15_RS20275 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal PCI15_RS20275 PF01578 Cytochrome C assembly protein PCI15_RS20280 PF03100 CcmE PCI15_RS20290 PF01578 Cytochrome C assembly protein PCI15_RS20295 PF03379 CcmB protein PCI15_RS20300 PF00005 ABC transporter PCI15_RS20310 PF01312 FlhB HrpN YscU SpaS Family PCI15_RS20325 PF13614 AAA domain PCI15_RS20330 PF00691 OmpA family PCI15_RS20330 PF13677 Membrane MotB of proton-channel complex MotA/MotB PCI15_RS20335 PF01618 MotA/TolQ/ExbB proton channel family PCI15_RS20340 PF00072 Response regulator receiver domain PCI15_RS20340 PF01339 CheB methylesterase PCI15_RS20345 PF01584 CheW-like domain PCI15_RS20345 PF02895 Signal transducing histidine kinase, homodimeric domain PCI15_RS20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS20345 PF01627 Hpt domain PCI15_RS20345 PF00072 Response regulator receiver domain PCI15_RS20350 PF04344 Chemotaxis phosphatase, CheZ PCI15_RS20355 PF00072 Response regulator receiver domain PCI15_RS20360 PF04545 Sigma-70, region 4 PCI15_RS20360 PF04539 Sigma-70 region 3 PCI15_RS20360 PF04542 Sigma-70 region 2 PCI15_RS20365 PF10609 NUBPL iron-transfer P-loop NTPase PCI15_RS20370 PF00448 SRP54-type protein, GTPase domain PCI15_RS20375 PF00771 FHIPEP family PCI15_RS20380 PF01312 FlhB HrpN YscU SpaS Family PCI15_RS20385 PF01311 Bacterial export proteins, family 1 PCI15_RS20390 PF01313 Bacterial export proteins, family 3 PCI15_RS20395 PF00813 FliP family PCI15_RS20400 PF04347 Flagellar biosynthesis protein, FliO PCI15_RS20405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PCI15_RS20410 PF02154 Flagellar motor switch protein FliM PCI15_RS20410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term PCI15_RS20420 PF02120 Flagellar hook-length control protein FliK PCI15_RS20430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PCI15_RS20430 PF18269 T3SS EscN ATPase C-terminal domain PCI15_RS20440 PF01706 FliG C-terminal domain PCI15_RS20440 PF14841 FliG middle domain PCI15_RS20440 PF14842 FliG N-terminal domain PCI15_RS20445 PF01514 Secretory protein of YscJ/FliF family PCI15_RS20445 PF08345 Flagellar M-ring protein C-terminal PCI15_RS20450 PF02049 Flagellar hook-basal body complex protein FliE PCI15_RS20465 PF00474 Sodium:solute symporter family PCI15_RS20475 PF00072 Response regulator receiver domain PCI15_RS20475 PF09456 RcsC Alpha-Beta-Loop (ABL) PCI15_RS20475 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS20475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS20480 PF00196 Bacterial regulatory proteins, luxR family PCI15_RS20480 PF00072 Response regulator receiver domain PCI15_RS20485 PF16177 Acetyl-coenzyme A synthetase N-terminus PCI15_RS20485 PF00501 AMP-binding enzyme PCI15_RS20485 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS20490 PF02954 Bacterial regulatory protein, Fis family PCI15_RS20490 PF00072 Response regulator receiver domain PCI15_RS20490 PF00158 Sigma-54 interaction domain PCI15_RS20495 PF13188 PAS domain PCI15_RS20495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS20495 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS20500 PF02954 Bacterial regulatory protein, Fis family PCI15_RS20500 PF06490 Flagellar regulatory protein FleQ PCI15_RS20500 PF00158 Sigma-54 interaction domain PCI15_RS20505 PF02561 Flagellar protein FliS PCI15_RS20510 PF07196 Flagellin hook IN motif PCI15_RS20510 PF07195 Flagellar hook-associated protein 2 C-terminus PCI15_RS20510 PF02465 Flagellar hook-associated protein 2 N-terminus PCI15_RS20520 PF00669 Bacterial flagellin N-terminal helical region PCI15_RS20520 PF00669 Bacterial flagellin N-terminal helical region PCI15_RS20520 PF00700 Bacterial flagellin C-terminal helical region PCI15_RS20520 PF00700 Bacterial flagellin C-terminal helical region PCI15_RS20530 PF00669 Bacterial flagellin N-terminal helical region PCI15_RS20535 PF07196 Flagellin hook IN motif PCI15_RS20535 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PCI15_RS20540 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase PCI15_RS20540 PF10135 Rod binding protein PCI15_RS20545 PF02119 Flagellar P-ring protein PCI15_RS20550 PF02107 Flagellar L-ring protein PCI15_RS20555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PCI15_RS20555 PF00460 Flagella basal body rod protein PCI15_RS20560 PF00460 Flagella basal body rod protein PCI15_RS20560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PCI15_RS20565 PF07559 Flagellar basal body protein FlaE PCI15_RS20565 PF00460 Flagella basal body rod protein PCI15_RS20565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PCI15_RS20575 PF00460 Flagella basal body rod protein PCI15_RS20575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal PCI15_RS20580 PF00460 Flagella basal body rod protein PCI15_RS20585 PF03705 CheR methyltransferase, all-alpha domain PCI15_RS20585 PF01739 CheR methyltransferase, SAM binding domain PCI15_RS20590 PF00072 Response regulator receiver domain PCI15_RS20590 PF01584 CheW-like domain PCI15_RS20600 PF04316 Anti-sigma-28 factor, FlgM PCI15_RS20615 PF00072 Response regulator receiver domain PCI15_RS20615 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS20620 PF00850 Histone deacetylase domain PCI15_RS20625 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit PCI15_RS20630 PF00364 Biotin-requiring enzyme PCI15_RS20630 PF00682 HMGL-like PCI15_RS20630 PF02436 Conserved carboxylase domain PCI15_RS20635 PF04277 Oxaloacetate decarboxylase, gamma chain PCI15_RS20640 PF02926 THUMP domain PCI15_RS20640 PF02568 Thiamine biosynthesis protein (ThiI) PCI15_RS20645 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS20645 PF05230 MASE2 domain PCI15_RS20650 PF01339 CheB methylesterase PCI15_RS20650 PF00072 Response regulator receiver domain PCI15_RS20660 PF03412 Peptidase C39 family PCI15_RS20660 PF00664 ABC transporter transmembrane region PCI15_RS20660 PF00005 ABC transporter PCI15_RS20665 PF00005 ABC transporter PCI15_RS20665 PF03412 Peptidase C39 family PCI15_RS20665 PF00664 ABC transporter transmembrane region PCI15_RS20695 PF02599 Global regulator protein family PCI15_RS20700 PF00696 Amino acid kinase family PCI15_RS20700 PF01842 ACT domain PCI15_RS20700 PF13840 ACT domain PCI15_RS20705 PF02272 DHHA1 domain PCI15_RS20705 PF01411 tRNA synthetases class II (A) PCI15_RS20705 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PCI15_RS20710 PF02631 RecX family PCI15_RS20715 PF00154 recA bacterial DNA recombination protein PCI15_RS20720 PF02464 Competence-damaged protein PCI15_RS20740 PF05190 MutS family domain IV PCI15_RS20740 PF05192 MutS domain III PCI15_RS20740 PF05188 MutS domain II PCI15_RS20740 PF00488 MutS domain V PCI15_RS20740 PF01624 MutS domain I PCI15_RS20750 PF00849 RNA pseudouridylate synthase PCI15_RS20750 PF01479 S4 domain PCI15_RS20765 PF00578 AhpC/TSA family PCI15_RS20775 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS20775 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS20775 PF00563 EAL domain PCI15_RS20785 PF00679 Elongation factor G C-terminus PCI15_RS20785 PF14492 Elongation Factor G, domain II PCI15_RS20785 PF03764 Elongation factor G, domain IV PCI15_RS20785 PF00009 Elongation factor Tu GTP binding domain PCI15_RS20785 PF03144 Elongation factor Tu domain 2 PCI15_RS20790 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS20790 PF00501 AMP-binding enzyme PCI15_RS20790 PF16177 Acetyl-coenzyme A synthetase N-terminus PCI15_RS20795 PF00977 Histidine biosynthesis protein PCI15_RS20820 PF04893 Yip1 domain PCI15_RS20825 PF01040 UbiA prenyltransferase family PCI15_RS20830 PF02628 Cytochrome oxidase assembly protein PCI15_RS20850 PF00510 Cytochrome c oxidase subunit III PCI15_RS20855 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 PCI15_RS20860 PF00115 Cytochrome C and Quinol oxidase polypeptide I PCI15_RS20865 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PCI15_RS20865 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PCI15_RS20875 PF01794 Ferric reductase like transmembrane component PCI15_RS20880 PF00174 Oxidoreductase molybdopterin binding domain PCI15_RS20885 PF01066 CDP-alcohol phosphatidyltransferase PCI15_RS20890 PF00117 Glutamine amidotransferase class-I PCI15_RS20890 PF00958 GMP synthase C terminal domain PCI15_RS20890 PF02568 Thiamine biosynthesis protein (ThiI) PCI15_RS20895 PF01494 FAD binding domain PCI15_RS20905 PF00004 ATPase family associated with various cellular activities (AAA) PCI15_RS20905 PF07724 AAA domain (Cdc48 subfamily) PCI15_RS20905 PF17871 AAA lid domain PCI15_RS20905 PF10431 C-terminal, D2-small domain, of ClpB protein PCI15_RS20905 PF02861 Clp amino terminal domain, pathogenicity island component PCI15_RS20910 PF02578 Multi-copper polyphenol oxidoreductase laccase PCI15_RS20915 PF00849 RNA pseudouridylate synthase PCI15_RS20915 PF01479 S4 domain PCI15_RS20920 PF13525 Outer membrane lipoprotein PCI15_RS20925 PF00563 EAL domain PCI15_RS20925 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS20925 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS20935 PF03725 3' exoribonuclease family, domain 2 PCI15_RS20935 PF00013 KH domain PCI15_RS20935 PF00575 S1 RNA binding domain PCI15_RS20935 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PCI15_RS20935 PF01138 3' exoribonuclease family, domain 1 PCI15_RS20940 PF00312 Ribosomal protein S15 PCI15_RS20945 PF16198 tRNA pseudouridylate synthase B C-terminal domain PCI15_RS20945 PF01509 TruB family pseudouridylate synthase (N terminal domain) PCI15_RS20945 PF09157 Pseudouridine synthase II TruB, C-terminal PCI15_RS20950 PF02033 Ribosome-binding factor A PCI15_RS20955 PF11987 Translation-initiation factor 2 PCI15_RS20955 PF00009 Elongation factor Tu GTP binding domain PCI15_RS20955 PF08364 Bacterial translation initiation factor IF-2 associated region PCI15_RS20955 PF04760 Translation initiation factor IF-2, N-terminal region PCI15_RS20960 PF13184 NusA-like KH domain PCI15_RS20960 PF00575 S1 RNA binding domain PCI15_RS20960 PF08529 NusA N-terminal domain PCI15_RS20965 PF17384 RimP C-terminal SH3 domain PCI15_RS20965 PF02576 RimP N-terminal domain PCI15_RS20980 PF03840 Preprotein translocase SecG subunit PCI15_RS20985 PF00121 Triosephosphate isomerase PCI15_RS20990 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PCI15_RS20990 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PCI15_RS20990 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PCI15_RS20990 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PCI15_RS20995 PF00809 Pterin binding enzyme PCI15_RS21000 PF06480 FtsH Extracellular PCI15_RS21000 PF01434 Peptidase family M41 PCI15_RS21000 PF00004 ATPase family associated with various cellular activities (AAA) PCI15_RS21000 PF17862 AAA+ lid domain PCI15_RS21005 PF01728 FtsJ-like methyltransferase PCI15_RS21010 PF01985 CRS1 / YhbY (CRM) domain PCI15_RS21015 PF03449 Transcription elongation factor, N-terminal PCI15_RS21015 PF01272 Transcription elongation factor, GreA/GreB, C-term PCI15_RS21020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PCI15_RS21020 PF02142 MGS-like domain PCI15_RS21020 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PCI15_RS21025 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PCI15_RS21025 PF00117 Glutamine amidotransferase class-I PCI15_RS21030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS21035 PF05992 SbmA/BacA-like family PCI15_RS21040 PF00089 Trypsin PCI15_RS21080 PF00586 AIR synthase related protein, N-terminal domain PCI15_RS21080 PF02769 AIR synthase related protein, C-terminal domain PCI15_RS21090 PF01625 Peptide methionine sulfoxide reductase PCI15_RS21090 PF01641 SelR domain PCI15_RS21105 PF00202 Aminotransferase class-III PCI15_RS21110 PF03466 LysR substrate binding domain PCI15_RS21110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS21120 PF13458 Periplasmic binding protein PCI15_RS21125 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS21130 PF02653 Branched-chain amino acid transport system / permease component PCI15_RS21130 PF11862 Domain of unknown function (DUF3382) PCI15_RS21135 PF00005 ABC transporter PCI15_RS21135 PF12399 Branched-chain amino acid ATP-binding cassette transporter PCI15_RS21140 PF00005 ABC transporter PCI15_RS21150 PF03989 DNA gyrase C-terminal domain, beta-propeller PCI15_RS21150 PF00521 DNA gyrase/topoisomerase IV, subunit A PCI15_RS21155 PF01751 Toprim domain PCI15_RS21155 PF00204 DNA gyrase B PCI15_RS21155 PF00986 DNA gyrase B subunit, carboxyl terminus PCI15_RS21155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS21160 PF05728 Uncharacterised protein family (UPF0227) PCI15_RS21165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS21165 PF03466 LysR substrate binding domain PCI15_RS21190 PF10369 Small subunit of acetolactate synthase PCI15_RS21195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PCI15_RS21195 PF00205 Thiamine pyrophosphate enzyme, central domain PCI15_RS21195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PCI15_RS21205 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ PCI15_RS21210 PF03949 Malic enzyme, NAD binding domain PCI15_RS21210 PF00390 Malic enzyme, N-terminal domain PCI15_RS21215 PF01197 Ribosomal protein L31 PCI15_RS21220 PF00270 DEAD/DEAH box helicase PCI15_RS21220 PF00271 Helicase conserved C-terminal domain PCI15_RS21220 PF17764 3′ DNA-binding domain (3′BD) PCI15_RS21220 PF18074 Primosomal protein N C-terminal domain PCI15_RS21220 PF18319 PriA DNA helicase Cys-rich region (CRR) domain PCI15_RS21225 PF00750 tRNA synthetases class I (R) PCI15_RS21225 PF03485 Arginyl tRNA synthetase N terminal domain PCI15_RS21225 PF05746 DALR anticodon binding domain PCI15_RS21230 PF05036 Sporulation related domain PCI15_RS21235 PF00227 Proteasome subunit PCI15_RS21240 PF00004 ATPase family associated with various cellular activities (AAA) PCI15_RS21240 PF07724 AAA domain (Cdc48 subfamily) PCI15_RS21250 PF01209 ubiE/COQ5 methyltransferase family PCI15_RS21260 PF03653 Uncharacterised protein family (UPF0093) PCI15_RS21265 PF01557 Fumarylacetoacetate (FAA) hydrolase family PCI15_RS21270 PF06865 Pyrimidine/purine nucleoside phosphorylase PCI15_RS21295 PF02463 RecF/RecN/SMC N terminal domain PCI15_RS21315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PCI15_RS21315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PCI15_RS21335 PF00248 Aldo/keto reductase family PCI15_RS21340 PF10672 S-adenosylmethionine-dependent methyltransferase PCI15_RS21340 PF17785 PUA-like domain PCI15_RS21345 PF01597 Glycine cleavage H-protein PCI15_RS21350 PF01494 FAD binding domain PCI15_RS21355 PF01494 FAD binding domain PCI15_RS21360 PF05195 Aminopeptidase P, N-terminal domain PCI15_RS21360 PF00557 Metallopeptidase family M24 PCI15_RS21365 PF03695 Uncharacterised protein family (UPF0149) PCI15_RS21375 PF05164 Cell division protein ZapA PCI15_RS21385 PF01812 5-formyltetrahydrofolate cyclo-ligase family PCI15_RS21405 PF00672 HAMP domain PCI15_RS21405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS21410 PF14698 Argininosuccinate lyase C-terminal PCI15_RS21410 PF00206 Lyase PCI15_RS21415 PF03900 Porphobilinogen deaminase, C-terminal domain PCI15_RS21415 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PCI15_RS21420 PF02602 Uroporphyrinogen-III synthase HemD PCI15_RS21425 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase PCI15_RS21435 PF00970 Oxidoreductase FAD-binding domain PCI15_RS21435 PF00111 2Fe-2S iron-sulfur cluster binding domain PCI15_RS21435 PF00175 Oxidoreductase NAD-binding domain PCI15_RS21445 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase PCI15_RS21450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PCI15_RS21450 PF07498 Rho termination factor, N-terminal domain PCI15_RS21450 PF07497 Rho termination factor, RNA-binding domain PCI15_RS21455 PF00085 Thioredoxin PCI15_RS21460 PF02541 Ppx/GppA phosphatase family PCI15_RS21465 PF01814 Hemerythrin HHE cation binding domain PCI15_RS21470 PF01196 Ribosomal protein L17 PCI15_RS21475 PF01000 RNA polymerase Rpb3/RpoA insert domain PCI15_RS21475 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PCI15_RS21475 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PCI15_RS21480 PF01479 S4 domain PCI15_RS21480 PF00163 Ribosomal protein S4/S9 N-terminal domain PCI15_RS21485 PF00411 Ribosomal protein S11 PCI15_RS21490 PF00416 Ribosomal protein S13/S18 PCI15_RS21495 PF00444 Ribosomal protein L36 PCI15_RS21500 PF00344 SecY translocase PCI15_RS21505 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PCI15_RS21510 PF00327 Ribosomal protein L30p/L7e PCI15_RS21515 PF03719 Ribosomal protein S5, C-terminal domain PCI15_RS21515 PF00333 Ribosomal protein S5, N-terminal domain PCI15_RS21520 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PCI15_RS21525 PF00347 Ribosomal protein L6 PCI15_RS21530 PF00410 Ribosomal protein S8 PCI15_RS21535 PF00253 Ribosomal protein S14p/S29e PCI15_RS21540 PF00281 Ribosomal protein L5 PCI15_RS21540 PF00673 ribosomal L5P family C-terminus PCI15_RS21545 PF00467 KOW motif PCI15_RS21545 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PCI15_RS21550 PF00238 Ribosomal protein L14p/L23e PCI15_RS21555 PF00366 Ribosomal protein S17 PCI15_RS21560 PF00831 Ribosomal L29 protein PCI15_RS21565 PF00252 Ribosomal protein L16p/L10e PCI15_RS21570 PF00189 Ribosomal protein S3, C-terminal domain PCI15_RS21570 PF07650 KH domain PCI15_RS21575 PF00237 Ribosomal protein L22p/L17e PCI15_RS21580 PF00203 Ribosomal protein S19 PCI15_RS21585 PF00181 Ribosomal Proteins L2, RNA binding domain PCI15_RS21585 PF03947 Ribosomal Proteins L2, C-terminal domain PCI15_RS21590 PF00276 Ribosomal protein L23 PCI15_RS21595 PF00573 Ribosomal protein L4/L1 family PCI15_RS21600 PF00297 Ribosomal protein L3 PCI15_RS21605 PF00338 Ribosomal protein S10p/S20e PCI15_RS21610 PF03143 Elongation factor Tu C-terminal domain PCI15_RS21610 PF03144 Elongation factor Tu domain 2 PCI15_RS21610 PF00009 Elongation factor Tu GTP binding domain PCI15_RS21615 PF00679 Elongation factor G C-terminus PCI15_RS21615 PF14492 Elongation Factor G, domain II PCI15_RS21615 PF03764 Elongation factor G, domain IV PCI15_RS21615 PF00009 Elongation factor Tu GTP binding domain PCI15_RS21615 PF03144 Elongation factor Tu domain 2 PCI15_RS21620 PF00177 Ribosomal protein S7p/S5e PCI15_RS21625 PF00164 Ribosomal protein S12/S23 PCI15_RS21630 PF04998 RNA polymerase Rpb1, domain 5 PCI15_RS21630 PF05000 RNA polymerase Rpb1, domain 4 PCI15_RS21630 PF00623 RNA polymerase Rpb1, domain 2 PCI15_RS21630 PF04997 RNA polymerase Rpb1, domain 1 PCI15_RS21630 PF04983 RNA polymerase Rpb1, domain 3 PCI15_RS21635 PF04563 RNA polymerase beta subunit PCI15_RS21635 PF04561 RNA polymerase Rpb2, domain 2 PCI15_RS21635 PF10385 RNA polymerase beta subunit external 1 domain PCI15_RS21635 PF00562 RNA polymerase Rpb2, domain 6 PCI15_RS21635 PF04560 RNA polymerase Rpb2, domain 7 PCI15_RS21635 PF04565 RNA polymerase Rpb2, domain 3 PCI15_RS21640 PF00542 Ribosomal protein L7/L12 C-terminal domain PCI15_RS21640 PF16320 Ribosomal protein L7/L12 dimerisation domain PCI15_RS21645 PF00466 Ribosomal protein L10 PCI15_RS21650 PF00687 Ribosomal protein L1p/L10e family PCI15_RS21655 PF03946 Ribosomal protein L11, N-terminal domain PCI15_RS21655 PF00298 Ribosomal protein L11, RNA binding domain PCI15_RS21660 PF02357 Transcription termination factor nusG PCI15_RS21660 PF00467 KOW motif PCI15_RS21665 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PCI15_RS21675 PF00009 Elongation factor Tu GTP binding domain PCI15_RS21675 PF03143 Elongation factor Tu C-terminal domain PCI15_RS21675 PF03144 Elongation factor Tu domain 2 PCI15_RS21705 PF03309 Type III pantothenate kinase PCI15_RS21710 PF08279 HTH domain PCI15_RS21710 PF03099 Biotin/lipoate A/B protein ligase family PCI15_RS21710 PF02237 Biotin protein ligase C terminal domain PCI15_RS21715 PF00186 Dihydrofolate reductase PCI15_RS21720 PF00303 Thymidylate synthase PCI15_RS21725 PF01790 Prolipoprotein diacylglyceryl transferase PCI15_RS21730 PF01925 Sulfite exporter TauE/SafE PCI15_RS21740 PF02896 PEP-utilising enzyme, TIM barrel domain PCI15_RS21740 PF05524 PEP-utilising enzyme, N-terminal PCI15_RS21740 PF01590 GAF domain PCI15_RS21740 PF00391 PEP-utilising enzyme, mobile domain PCI15_RS21745 PF00293 NUDIX domain PCI15_RS21760 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS21760 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS21770 PF00155 Aminotransferase class I and II PCI15_RS21785 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS21785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS21785 PF08521 Two-component sensor kinase N-terminal PCI15_RS21790 PF00072 Response regulator receiver domain PCI15_RS21790 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS21805 PF03109 ABC1 family PCI15_RS21835 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PCI15_RS21840 PF00580 UvrD/REP helicase N-terminal domain PCI15_RS21840 PF13361 UvrD-like helicase C-terminal domain PCI15_RS21845 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS21845 PF00563 EAL domain PCI15_RS21845 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS21850 PF13335 Magnesium chelatase, subunit ChlI C-terminal PCI15_RS21850 PF01078 Magnesium chelatase, subunit ChlI PCI15_RS21855 PF04380 Membrane fusogenic activity PCI15_RS21860 PF00909 Ammonium Transporter Family PCI15_RS21865 PF00543 Nitrogen regulatory protein P-II PCI15_RS21895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PCI15_RS21895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PCI15_RS21900 PF01022 Bacterial regulatory protein, arsR family PCI15_RS21905 PF04958 Arginine N-succinyltransferase beta subunit PCI15_RS21910 PF16527 Two-component sensor protein CpxA, periplasmic domain PCI15_RS21910 PF00672 HAMP domain PCI15_RS21910 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS21910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS21915 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS21915 PF00072 Response regulator receiver domain PCI15_RS21925 PF03167 Uracil DNA glycosylase superfamily PCI15_RS21930 PF03150 Di-haem cytochrome c peroxidase PCI15_RS21935 PF02080 TrkA-C domain PCI15_RS21935 PF03600 Citrate transporter PCI15_RS21940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS21940 PF03466 LysR substrate binding domain PCI15_RS21945 PF01116 Fructose-bisphosphate aldolase class-II PCI15_RS21950 PF00274 Fructose-bisphosphate aldolase class-I PCI15_RS21955 PF00162 Phosphoglycerate kinase PCI15_RS21960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PCI15_RS21960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PCI15_RS21965 PF00456 Transketolase, thiamine diphosphate binding domain PCI15_RS21965 PF02779 Transketolase, pyrimidine binding domain PCI15_RS21965 PF02780 Transketolase, C-terminal domain PCI15_RS21970 PF02773 S-adenosylmethionine synthetase, C-terminal domain PCI15_RS21970 PF02772 S-adenosylmethionine synthetase, central domain PCI15_RS21970 PF00438 S-adenosylmethionine synthetase, N-terminal domain PCI15_RS21975 PF04452 RNA methyltransferase PCI15_RS21980 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain PCI15_RS21980 PF02951 Prokaryotic glutathione synthetase, N-terminal domain PCI15_RS21990 PF02622 Uncharacterized ACR, COG1678 PCI15_RS21995 PF03652 Holliday junction resolvase PCI15_RS22000 PF00156 Phosphoribosyl transferase domain PCI15_RS22005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PCI15_RS22005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PCI15_RS22010 PF01979 Amidohydrolase family PCI15_RS22015 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS22020 PF01053 Cys/Met metabolism PLP-dependent enzyme PCI15_RS22025 PF03466 LysR substrate binding domain PCI15_RS22025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS22030 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PCI15_RS22030 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase PCI15_RS22035 PF00171 Aldehyde dehydrogenase family PCI15_RS22050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS22080 PF00106 short chain dehydrogenase PCI15_RS22105 PF03594 Benzoate membrane transport protein PCI15_RS22110 PF01381 Helix-turn-helix PCI15_RS22110 PF07883 Cupin domain PCI15_RS22130 PF12973 ChrR Cupin-like domain PCI15_RS22135 PF04542 Sigma-70 region 2 PCI15_RS22135 PF04545 Sigma-70, region 4 PCI15_RS22155 PF04304 Protein of unknown function (DUF454) PCI15_RS22160 PF00199 Catalase PCI15_RS22160 PF06628 Catalase-related immune-responsive PCI15_RS22170 PF00106 short chain dehydrogenase PCI15_RS22195 PF00171 Aldehyde dehydrogenase family PCI15_RS22205 PF00005 ABC transporter PCI15_RS22210 PF01032 FecCD transport family PCI15_RS22220 PF05171 Haemin-degrading HemS.ChuX domain PCI15_RS22225 PF07715 TonB-dependent Receptor Plug Domain PCI15_RS22225 PF00593 TonB dependent receptor PCI15_RS22230 PF10636 Hemin uptake protein hemP PCI15_RS22245 PF02472 Biopolymer transport protein ExbD/TolR PCI15_RS22250 PF01618 MotA/TolQ/ExbB proton channel family PCI15_RS22255 PF01618 MotA/TolQ/ExbB proton channel family PCI15_RS22265 PF03466 LysR substrate binding domain PCI15_RS22265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS22270 PF03401 Tripartite tricarboxylate transporter family receptor PCI15_RS22280 PF01970 Tripartite tricarboxylate transporter TctA family PCI15_RS22285 PF00206 Lyase PCI15_RS22285 PF10397 Adenylosuccinate lyase C-terminus PCI15_RS22295 PF01593 Flavin containing amine oxidoreductase PCI15_RS22300 PF01266 FAD dependent oxidoreductase PCI15_RS22310 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term PCI15_RS22310 PF12833 Helix-turn-helix domain PCI15_RS22320 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ PCI15_RS22335 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PCI15_RS22335 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PCI15_RS22355 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PCI15_RS22360 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS22360 PF00585 C-terminal regulatory domain of Threonine dehydratase PCI15_RS22400 PF02954 Bacterial regulatory protein, Fis family PCI15_RS22400 PF00158 Sigma-54 interaction domain PCI15_RS22400 PF00072 Response regulator receiver domain PCI15_RS22405 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS22410 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS22415 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS22420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS22420 PF00672 HAMP domain PCI15_RS22420 PF02743 Cache domain PCI15_RS22425 PF00072 Response regulator receiver domain PCI15_RS22425 PF00158 Sigma-54 interaction domain PCI15_RS22425 PF02954 Bacterial regulatory protein, Fis family PCI15_RS22430 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS22430 PF02743 Cache domain PCI15_RS22430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS22435 PF16921 Tex protein YqgF-like domain PCI15_RS22435 PF17674 HHH domain PCI15_RS22435 PF09371 Tex-like protein N-terminal domain PCI15_RS22435 PF00575 S1 RNA binding domain PCI15_RS22440 PF04262 Glutamate-cysteine ligase PCI15_RS22455 PF03466 LysR substrate binding domain PCI15_RS22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS22460 PF02668 Taurine catabolism dioxygenase TauD, TfdA family PCI15_RS22460 PF06155 Protein of unknown function (DUF971) PCI15_RS22475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS22475 PF03466 LysR substrate binding domain PCI15_RS22485 PF03120 NAD-dependent DNA ligase OB-fold domain PCI15_RS22485 PF12826 Helix-hairpin-helix motif PCI15_RS22485 PF00533 BRCA1 C Terminus (BRCT) domain PCI15_RS22485 PF01653 NAD-dependent DNA ligase adenylation domain PCI15_RS22485 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PCI15_RS22490 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS22490 PF08448 PAS fold PCI15_RS22495 PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ PCI15_RS22505 PF01329 Pterin 4 alpha carbinolamine dehydratase PCI15_RS22510 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS22520 PF12833 Helix-turn-helix domain PCI15_RS22520 PF01965 DJ-1/PfpI family PCI15_RS22550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS22550 PF03466 LysR substrate binding domain PCI15_RS22555 PF00005 ABC transporter PCI15_RS22555 PF03459 TOBE domain PCI15_RS22560 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS22575 PF01266 FAD dependent oxidoreductase PCI15_RS22580 PF00120 Glutamine synthetase, catalytic domain PCI15_RS22585 PF13416 Bacterial extracellular solute-binding protein PCI15_RS22595 PF08402 TOBE domain PCI15_RS22595 PF00005 ABC transporter PCI15_RS22600 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS22605 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS22610 PF02540 NAD synthase PCI15_RS22610 PF00117 Glutamine amidotransferase class-I PCI15_RS22610 PF00958 GMP synthase C terminal domain PCI15_RS22615 PF13416 Bacterial extracellular solute-binding protein PCI15_RS22620 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS22625 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS22630 PF00005 ABC transporter PCI15_RS22630 PF17912 MalK OB fold domain PCI15_RS22640 PF02615 Malate/L-lactate dehydrogenase PCI15_RS22655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS22655 PF03466 LysR substrate binding domain PCI15_RS22660 PF00171 Aldehyde dehydrogenase family PCI15_RS22665 PF01244 Membrane dipeptidase (Peptidase family M19) PCI15_RS22670 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS22675 PF01841 Transglutaminase-like superfamily PCI15_RS22675 PF13559 Domain of unknown function (DUF4129) PCI15_RS22675 PF11992 Domain of unknown function (DUF3488) PCI15_RS22685 PF17863 AAA lid domain PCI15_RS22685 PF07726 ATPase family associated with various cellular activities (AAA) PCI15_RS22695 PF01042 Endoribonuclease L-PSP PCI15_RS22700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS22700 PF03466 LysR substrate binding domain PCI15_RS22715 PF00753 Metallo-beta-lactamase superfamily PCI15_RS22725 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase PCI15_RS22725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PCI15_RS22735 PF00005 ABC transporter PCI15_RS22735 PF12848 ABC transporter PCI15_RS22740 PF01810 LysE type translocator PCI15_RS22750 PF13291 ACT domain PCI15_RS22750 PF04607 Region found in RelA / SpoT proteins PCI15_RS22750 PF02824 TGS domain PCI15_RS22755 PF01192 RNA polymerase Rpb6 PCI15_RS22760 PF00625 Guanylate kinase PCI15_RS22780 PF05114 Protein of unknown function (DUF692) PCI15_RS22795 PF00498 FHA domain PCI15_RS22795 PF00563 EAL domain PCI15_RS22795 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS22805 PF00501 AMP-binding enzyme PCI15_RS22805 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS22805 PF00668 Condensation domain PCI15_RS22805 PF07993 Male sterility protein PCI15_RS22805 PF00550 Phosphopantetheine attachment site PCI15_RS22815 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS22820 PF00072 Response regulator receiver domain PCI15_RS22820 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS22825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS22825 PF00989 PAS fold PCI15_RS22825 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS22825 PF16736 Single Cache-like PCI15_RS22835 PF03707 Bacterial signalling protein N terminal repeat PCI15_RS22835 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS22835 PF00563 EAL domain PCI15_RS22840 PF02028 BCCT, betaine/carnitine/choline family transporter PCI15_RS22845 PF07969 Amidohydrolase family PCI15_RS22850 PF03466 LysR substrate binding domain PCI15_RS22850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS22855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS22855 PF00672 HAMP domain PCI15_RS22860 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS22860 PF00672 HAMP domain PCI15_RS22885 PF07724 AAA domain (Cdc48 subfamily) PCI15_RS22885 PF00004 ATPase family associated with various cellular activities (AAA) PCI15_RS22885 PF10431 C-terminal, D2-small domain, of ClpB protein PCI15_RS22885 PF02861 Clp amino terminal domain, pathogenicity island component PCI15_RS22885 PF17871 AAA lid domain PCI15_RS22890 PF14437 MafB19-like deaminase PCI15_RS22915 PF00902 Sec-independent protein translocase protein (TatC) PCI15_RS22920 PF02416 mttA/Hcf106 family PCI15_RS22925 PF02416 mttA/Hcf106 family PCI15_RS22935 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PCI15_RS22940 PF01502 Phosphoribosyl-AMP cyclohydrolase PCI15_RS22945 PF03109 ABC1 family PCI15_RS22950 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS22955 PF01323 DSBA-like thioredoxin domain PCI15_RS22960 PF00034 Cytochrome c PCI15_RS22965 PF01926 50S ribosome-binding GTPase PCI15_RS22970 PF01612 3'-5' exonuclease PCI15_RS22970 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PCI15_RS22970 PF01367 5'-3' exonuclease, C-terminal SAM fold PCI15_RS22970 PF00476 DNA polymerase family A PCI15_RS22975 PF01636 Phosphotransferase enzyme family PCI15_RS22980 PF01638 HxlR-like helix-turn-helix PCI15_RS22990 PF00117 Glutamine amidotransferase class-I PCI15_RS22995 PF04715 Anthranilate synthase component I, N terminal region PCI15_RS22995 PF00425 chorismate binding enzyme PCI15_RS23000 PF01371 Trp repressor protein PCI15_RS23005 PF00313 'Cold-shock' DNA-binding domain PCI15_RS23010 PF08206 Ribonuclease B OB domain PCI15_RS23010 PF17876 Cold shock domain PCI15_RS23010 PF00575 S1 RNA binding domain PCI15_RS23010 PF08461 Ribonuclease R winged-helix domain PCI15_RS23010 PF00773 RNB domain PCI15_RS23015 PF13361 UvrD-like helicase C-terminal domain PCI15_RS23015 PF00580 UvrD/REP helicase N-terminal domain PCI15_RS23025 PF12729 Four helix bundle sensory module for signal transduction PCI15_RS23025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS23025 PF00672 HAMP domain PCI15_RS23035 PF12849 PBP superfamily domain PCI15_RS23040 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS23045 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS23050 PF00005 ABC transporter PCI15_RS23055 PF01895 PhoU domain PCI15_RS23065 PF00360 Phytochrome region PCI15_RS23065 PF00990 Diguanylate cyclase, GGDEF domain PCI15_RS23065 PF01590 GAF domain PCI15_RS23065 PF00563 EAL domain PCI15_RS23080 PF04345 Chorismate lyase PCI15_RS23085 PF01040 UbiA prenyltransferase family PCI15_RS23090 PF00072 Response regulator receiver domain PCI15_RS23090 PF00486 Transcriptional regulatory protein, C terminal PCI15_RS23095 PF00989 PAS fold PCI15_RS23095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PCI15_RS23095 PF11808 Phosphate regulon sensor protein PhoR PCI15_RS23095 PF00512 His Kinase A (phospho-acceptor) domain PCI15_RS23100 PF06725 3D domain PCI15_RS23100 PF03562 MltA specific insert domain PCI15_RS23115 PF08240 Alcohol dehydrogenase GroES-like domain PCI15_RS23115 PF00107 Zinc-binding dehydrogenase PCI15_RS23140 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS23160 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS23165 PF01418 Helix-turn-helix domain, rpiR family PCI15_RS23165 PF01380 SIS domain PCI15_RS23180 PF01645 Conserved region in glutamate synthase PCI15_RS23195 PF01321 Creatinase/Prolidase N-terminal domain PCI15_RS23195 PF00557 Metallopeptidase family M24 PCI15_RS23200 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component PCI15_RS23205 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component PCI15_RS23210 PF03480 Bacterial extracellular solute-binding protein, family 7 PCI15_RS23215 PF01546 Peptidase family M20/M25/M40 PCI15_RS23215 PF07687 Peptidase dimerisation domain PCI15_RS23225 PF01037 Lrp/AsnC ligand binding domain PCI15_RS23230 PF00291 Pyridoxal-phosphate dependent enzyme PCI15_RS23235 PF06445 GyrI-like small molecule binding domain PCI15_RS23240 PF07690 Major Facilitator Superfamily PCI15_RS23260 PF00194 Eukaryotic-type carbonic anhydrase PCI15_RS23265 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PCI15_RS23275 PF01914 MarC family integral membrane protein PCI15_RS23280 PF01380 SIS domain PCI15_RS23285 PF00132 Bacterial transferase hexapeptide (six repeats) PCI15_RS23285 PF12804 MobA-like NTP transferase domain PCI15_RS23300 PF05114 Protein of unknown function (DUF692) PCI15_RS23310 PF00795 Carbon-nitrogen hydrolase PCI15_RS23315 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PCI15_RS23320 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS23325 PF00005 ABC transporter PCI15_RS23325 PF00571 CBS domain PCI15_RS23330 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS23335 PF03466 LysR substrate binding domain PCI15_RS23335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS23340 PF00005 ABC transporter PCI15_RS23345 PF00528 Binding-protein-dependent transport system inner membrane component PCI15_RS23350 PF00497 Bacterial extracellular solute-binding proteins, family 3 PCI15_RS23355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS23355 PF03466 LysR substrate binding domain PCI15_RS23365 PF01212 Beta-eliminating lyase PCI15_RS23370 PF00171 Aldehyde dehydrogenase family PCI15_RS23375 PF01965 DJ-1/PfpI family PCI15_RS23375 PF12833 Helix-turn-helix domain PCI15_RS23380 PF06253 Trimethylamine methyltransferase (MTTB) PCI15_RS23385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PCI15_RS23395 PF03466 LysR substrate binding domain PCI15_RS23395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PCI15_RS23415 PF01266 FAD dependent oxidoreductase PCI15_RS23425 PF08669 Glycine cleavage T-protein C-terminal barrel domain PCI15_RS23425 PF07992 Pyridine nucleotide-disulphide oxidoreductase PCI15_RS23425 PF01571 Aminomethyltransferase folate-binding domain PCI15_RS23425 PF17806 Sarcosine oxidase A3 domain PCI15_RS23440 PF04267 Sarcosine oxidase, delta subunit family PCI15_RS23445 PF01266 FAD dependent oxidoreductase PCI15_RS23450 PF01909 Nucleotidyltransferase domain PCI15_RS23455 PF08780 Nucleotidyltransferase substrate binding protein like PCI15_RS23460 PF00271 Helicase conserved C-terminal domain PCI15_RS23460 PF00270 DEAD/DEAH box helicase PCI15_RS23465 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) PCI15_RS23470 PF13193 AMP-binding enzyme C-terminal domain PCI15_RS23470 PF00501 AMP-binding enzyme PCI15_RS23475 PF13411 MerR HTH family regulatory protein PCI15_RS23480 PF00108 Thiolase, N-terminal domain PCI15_RS23480 PF02803 Thiolase, C-terminal domain PCI15_RS23485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain PCI15_RS23485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PCI15_RS23485 PF00378 Enoyl-CoA hydratase/isomerase PCI15_RS23490 PF02770 Acyl-CoA dehydrogenase, middle domain PCI15_RS23490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain PCI15_RS23490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain PCI15_RS23490 PF12806 Acetyl-CoA dehydrogenase C-terminal like PCI15_RS23495 PF09905 DNA-binding protein VF530 PCI15_RS23500 PF13847 Methyltransferase domain PCI15_RS23510 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain PCI15_RS23510 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PCI15_RS23515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PCI15_RS23515 PF02874 ATP synthase alpha/beta family, beta-barrel domain PCI15_RS23520 PF00231 ATP synthase PCI15_RS23525 PF02874 ATP synthase alpha/beta family, beta-barrel domain PCI15_RS23525 PF00306 ATP synthase alpha/beta chain, C terminal domain PCI15_RS23525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PCI15_RS23530 PF00213 ATP synthase delta (OSCP) subunit PCI15_RS23535 PF00430 ATP synthase B/B' CF(0) PCI15_RS23540 PF00137 ATP synthase subunit C PCI15_RS23545 PF00119 ATP synthase A chain PCI15_RS23555 PF17762 HTH domain found in ParB protein PCI15_RS23555 PF02195 ParB-like nuclease domain PCI15_RS23560 PF13614 AAA domain PCI15_RS23565 PF02527 rRNA small subunit methyltransferase G PCI15_RS23570 PF13932 GidA associated domain PCI15_RS23570 PF01134 Glucose inhibited division protein A PCI15_RS23575 PF02743 Cache domain PCI15_RS23575 PF00672 HAMP domain PCI15_RS23575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain PCI15_RS23580 PF00355 Rieske [2Fe-2S] domain PCI15_RS23580 PF00848 Ring hydroxylating alpha subunit (catalytic domain) PCI15_RS23585 PF04055 Radical SAM superfamily PCI15_RS23585 PF01938 TRAM domain PCI15_RS23585 PF00919 Uncharacterized protein family UPF0004 PCI15_RS23600 PF04116 Fatty acid hydroxylase superfamily PCI15_RS23625 PF03600 Citrate transporter PCI15_RS23635 PF00085 Thioredoxin PCI15_RS23660 PF01926 50S ribosome-binding GTPase PCI15_RS23660 PF12631 MnmE helical domain PCI15_RS23660 PF10396 GTP-binding protein TrmE N-terminus PCI15_RS23665 PF02096 60Kd inner membrane protein PCI15_RS23665 PF14849 YidC periplasmic domain PCI15_RS23670 PF00825 Ribonuclease P PCI15_RS23675 PF00468 Ribosomal protein L34