locus-tag class description C3B42_RS00005 PF00308 Bacterial dnaA protein C3B42_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix C3B42_RS00005 PF11638 DnaA N-terminal domain C3B42_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C3B42_RS00010 PF02767 DNA polymerase III beta subunit, central domain C3B42_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C3B42_RS00015 PF00204 DNA gyrase B C3B42_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus C3B42_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS00015 PF01751 Toprim domain C3B42_RS00020 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B42_RS00025 PF14489 QueF-like protein C3B42_RS00045 PF01980 tRNA-methyltransferase O C3B42_RS00050 PF13649 Methyltransferase domain C3B42_RS00055 PF00005 ABC transporter C3B42_RS00055 PF08402 TOBE domain C3B42_RS00060 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B42_RS00075 PF03459 TOBE domain C3B42_RS00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B42_RS00085 PF03466 LysR substrate binding domain C3B42_RS00105 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B42_RS00105 PF00529 HlyD membrane-fusion protein of T1SS C3B42_RS00110 PF00873 AcrB/AcrD/AcrF family C3B42_RS00120 PF00672 HAMP domain C3B42_RS00120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS00120 PF02203 Tar ligand binding domain homologue C3B42_RS00125 PF00672 HAMP domain C3B42_RS00125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS00125 PF02203 Tar ligand binding domain homologue C3B42_RS00140 PF01053 Cys/Met metabolism PLP-dependent enzyme C3B42_RS00145 PF02082 Transcriptional regulator C3B42_RS00150 PF00291 Pyridoxal-phosphate dependent enzyme C3B42_RS00160 PF01507 Phosphoadenosine phosphosulfate reductase family C3B42_RS00165 PF01507 Phosphoadenosine phosphosulfate reductase family C3B42_RS00170 PF00009 Elongation factor Tu GTP binding domain C3B42_RS00180 PF07690 Major Facilitator Superfamily C3B42_RS00185 PF00210 Ferritin-like domain C3B42_RS00190 PF13419 Haloacid dehalogenase-like hydrolase C3B42_RS00195 PF00205 Thiamine pyrophosphate enzyme, central domain C3B42_RS00195 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B42_RS00195 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3B42_RS00200 PF00171 Aldehyde dehydrogenase family C3B42_RS00205 PF03167 Uracil DNA glycosylase superfamily C3B42_RS00220 PF03883 Peroxide stress protein YaaA C3B42_RS00225 PF01544 CorA-like Mg2+ transporter protein C3B42_RS00240 PF00156 Phosphoribosyl transferase domain C3B42_RS00245 PF01765 Ribosome recycling factor C3B42_RS00250 PF03840 Preprotein translocase SecG subunit C3B42_RS00260 PF17792 ThiD2 family C3B42_RS00260 PF02581 Thiamine monophosphate synthase C3B42_RS00265 PF01027 Inhibitor of apoptosis-promoting Bax1 C3B42_RS00295 PF01926 50S ribosome-binding GTPase C3B42_RS00295 PF07650 KH domain C3B42_RS00315 PF00437 Type II/IV secretion system protein C3B42_RS00325 PF01544 CorA-like Mg2+ transporter protein C3B42_RS00330 PF01227 GTP cyclohydrolase I C3B42_RS00335 PF00005 ABC transporter C3B42_RS00335 PF08402 TOBE domain C3B42_RS00340 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS00345 PF13416 Bacterial extracellular solute-binding protein C3B42_RS00355 PF00117 Glutamine amidotransferase class-I C3B42_RS00405 PF02677 Epoxyqueuosine reductase QueH C3B42_RS00410 PF02684 Lipid-A-disaccharide synthetase C3B42_RS00415 PF07977 FabA-like domain C3B42_RS00420 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C3B42_RS00420 PF00132 Bacterial transferase hexapeptide (six repeats) C3B42_RS00425 PF07724 AAA domain (Cdc48 subfamily) C3B42_RS00425 PF06689 ClpX C4-type zinc finger C3B42_RS00425 PF10431 C-terminal, D2-small domain, of ClpB protein C3B42_RS00440 PF00677 Lumazine binding domain C3B42_RS00445 PF01134 Glucose inhibited division protein A C3B42_RS00445 PF13932 GidA associated domain C3B42_RS00450 PF01261 Xylose isomerase-like TIM barrel C3B42_RS00460 PF07690 Major Facilitator Superfamily C3B42_RS00475 PF01740 STAS domain C3B42_RS00475 PF00916 Sulfate permease family C3B42_RS00490 PF00004 ATPase family associated with various cellular activities (AAA) C3B42_RS00490 PF16450 Proteasomal ATPase OB C-terminal domain C3B42_RS00490 PF17758 Proteasomal ATPase OB N-terminal domain C3B42_RS00500 PF02621 Menaquinone biosynthesis C3B42_RS00505 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C3B42_RS00510 PF01751 Toprim domain C3B42_RS00510 PF13368 Topoisomerase C-terminal repeat C3B42_RS00510 PF01131 DNA topoisomerase C3B42_RS00520 PF06968 Biotin and Thiamin Synthesis associated domain C3B42_RS00520 PF04055 Radical SAM superfamily C3B42_RS00525 PF00154 recA bacterial DNA recombination protein C3B42_RS00535 PF02719 Polysaccharide biosynthesis protein C3B42_RS00540 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B42_RS00545 PF02348 Cytidylyltransferase C3B42_RS00560 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3B42_RS00560 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3B42_RS00580 PF00550 Phosphopantetheine attachment site C3B42_RS00580 PF00668 Condensation domain C3B42_RS00580 PF13193 AMP-binding enzyme C-terminal domain C3B42_RS00580 PF00501 AMP-binding enzyme C3B42_RS00595 PF00106 short chain dehydrogenase C3B42_RS00600 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3B42_RS00600 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3B42_RS00615 PF01553 Acyltransferase C3B42_RS00615 PF00501 AMP-binding enzyme C3B42_RS00615 PF13193 AMP-binding enzyme C-terminal domain C3B42_RS00635 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3B42_RS00635 PF00753 Metallo-beta-lactamase superfamily C3B42_RS00640 PF03102 NeuB family C3B42_RS00640 PF08666 SAF domain C3B42_RS00645 PF04101 Glycosyltransferase family 28 C-terminal domain C3B42_RS00665 PF00700 Bacterial flagellin C-terminal helical region C3B42_RS00665 PF07196 Flagellin hook IN motif C3B42_RS00665 PF00669 Bacterial flagellin N-terminal helical region C3B42_RS00670 PF00700 Bacterial flagellin C-terminal helical region C3B42_RS00670 PF07196 Flagellin hook IN motif C3B42_RS00670 PF00669 Bacterial flagellin N-terminal helical region C3B42_RS00675 PF05958 tRNA (Uracil-5-)-methyltransferase C3B42_RS00690 PF17191 RecG wedge domain C3B42_RS00690 PF00271 Helicase conserved C-terminal domain C3B42_RS00690 PF00270 DEAD/DEAH box helicase C3B42_RS00700 PF12804 MobA-like NTP transferase domain C3B42_RS00700 PF14602 Hexapeptide repeat of succinyl-transferase C3B42_RS00705 PF02441 Flavoprotein C3B42_RS00705 PF04127 DNA / pantothenate metabolism flavoprotein C3B42_RS00710 PF01255 Putative undecaprenyl diphosphate synthase C3B42_RS00725 PF01416 tRNA pseudouridine synthase C3B42_RS00735 PF01628 HrcA protein C terminal domain C3B42_RS00740 PF01025 GrpE C3B42_RS00745 PF00012 Hsp70 protein C3B42_RS00765 PF04028 Domain of unknown function (DUF374) C3B42_RS00770 PF00919 Uncharacterized protein family UPF0004 C3B42_RS00770 PF01938 TRAM domain C3B42_RS00770 PF04055 Radical SAM superfamily C3B42_RS00780 PF08529 NusA N-terminal domain C3B42_RS00780 PF13184 NusA-like KH domain C3B42_RS00785 PF01406 tRNA synthetases class I (C) catalytic domain C3B42_RS00785 PF09190 DALR domain C3B42_RS00790 PF03960 ArsC family C3B42_RS00795 PF02686 Glu-tRNAGln amidotransferase C subunit C3B42_RS00800 PF01702 Queuine tRNA-ribosyltransferase C3B42_RS00815 PF02875 Mur ligase family, glutamate ligase domain C3B42_RS00815 PF08245 Mur ligase middle domain C3B42_RS00815 PF01225 Mur ligase family, catalytic domain C3B42_RS00830 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C3B42_RS00830 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C3B42_RS00835 PF00773 RNB domain C3B42_RS00850 PF01250 Ribosomal protein S6 C3B42_RS00855 PF00436 Single-strand binding protein family C3B42_RS00860 PF01084 Ribosomal protein S18 C3B42_RS00865 PF03462 PCRF domain C3B42_RS00865 PF00472 RF-1 domain C3B42_RS00880 PF02660 Glycerol-3-phosphate acyltransferase C3B42_RS00885 PF02445 Quinolinate synthetase A protein C3B42_RS00890 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C3B42_RS00890 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C3B42_RS00905 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C3B42_RS00915 PF00288 GHMP kinases N terminal domain C3B42_RS00915 PF08544 GHMP kinases C terminal C3B42_RS00925 PF00009 Elongation factor Tu GTP binding domain C3B42_RS00925 PF11987 Translation-initiation factor 2 C3B42_RS00925 PF04760 Translation initiation factor IF-2, N-terminal region C3B42_RS00930 PF02033 Ribosome-binding factor A C3B42_RS00935 PF02576 RimP N-terminal domain C3B42_RS00940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3B42_RS00940 PF01872 RibD C-terminal domain C3B42_RS00945 PF01132 Elongation factor P (EF-P) OB domain C3B42_RS00945 PF08207 Elongation factor P (EF-P) KOW-like domain C3B42_RS00945 PF09285 Elongation factor P, C-terminal C3B42_RS00950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3B42_RS00950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3B42_RS00950 PF01842 ACT domain C3B42_RS00955 PF00575 S1 RNA binding domain C3B42_RS00960 PF02401 LytB protein C3B42_RS00965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3B42_RS00970 PF03484 tRNA synthetase B5 domain C3B42_RS00970 PF03147 Ferredoxin-fold anticodon binding domain C3B42_RS00970 PF01588 Putative tRNA binding domain C3B42_RS00970 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C3B42_RS00975 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C3B42_RS00975 PF01409 tRNA synthetases class II core domain (F) C3B42_RS00980 PF01230 HIT domain C3B42_RS00985 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C3B42_RS00990 PF00109 Beta-ketoacyl synthase, N-terminal domain C3B42_RS00990 PF02801 Beta-ketoacyl synthase, C-terminal domain C3B42_RS00995 PF00550 Phosphopantetheine attachment site C3B42_RS01015 PF06508 Queuosine biosynthesis protein QueC C3B42_RS01035 PF00032 Cytochrome b(C-terminal)/b6/petD C3B42_RS01035 PF00033 Cytochrome b/b6/petB C3B42_RS01045 PF00291 Pyridoxal-phosphate dependent enzyme C3B42_RS01050 PF00696 Amino acid kinase family C3B42_RS01055 PF00580 UvrD/REP helicase N-terminal domain C3B42_RS01055 PF13361 UvrD-like helicase C-terminal domain C3B42_RS01065 PF00119 ATP synthase A chain C3B42_RS01070 PF13291 ACT domain C3B42_RS01070 PF00291 Pyridoxal-phosphate dependent enzyme C3B42_RS01075 PF01116 Fructose-bisphosphate aldolase class-II C3B42_RS01085 PF00072 Response regulator receiver domain C3B42_RS01085 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS01090 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS01090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS01095 PF01545 Cation efflux family C3B42_RS01095 PF16916 Dimerisation domain of Zinc Transporter C3B42_RS01120 PF02403 Seryl-tRNA synthetase N-terminal domain C3B42_RS01120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3B42_RS01130 PF00563 EAL domain C3B42_RS01130 PF08495 FIST N domain C3B42_RS01130 PF10442 FIST C domain C3B42_RS01130 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS01150 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) C3B42_RS01155 PF12801 4Fe-4S binding domain C3B42_RS01155 PF13237 4Fe-4S dicluster domain C3B42_RS01160 PF12800 4Fe-4S binding domain C3B42_RS01160 PF12838 4Fe-4S dicluster domain C3B42_RS01165 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3B42_RS01165 PF00384 Molybdopterin oxidoreductase C3B42_RS01165 PF01568 Molydopterin dinucleotide binding domain C3B42_RS01165 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3B42_RS01180 PF00591 Glycosyl transferase family, a/b domain C3B42_RS01180 PF02885 Glycosyl transferase family, helical bundle domain C3B42_RS01185 PF06463 Molybdenum Cofactor Synthesis C C3B42_RS01185 PF04055 Radical SAM superfamily C3B42_RS01190 PF00312 Ribosomal protein S15 C3B42_RS01215 PF06228 Haem utilisation ChuX/HutX C3B42_RS01220 PF00005 ABC transporter C3B42_RS01220 PF00664 ABC transporter transmembrane region C3B42_RS01235 PF01497 Periplasmic binding protein C3B42_RS01240 PF01032 FecCD transport family C3B42_RS01245 PF00005 ABC transporter C3B42_RS01250 PF07715 TonB-dependent Receptor Plug Domain C3B42_RS01250 PF00593 TonB dependent receptor C3B42_RS01255 PF07715 TonB-dependent Receptor Plug Domain C3B42_RS01255 PF00593 TonB dependent receptor C3B42_RS01265 PF08447 PAS fold C3B42_RS01265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01270 PF00672 HAMP domain C3B42_RS01270 PF02203 Tar ligand binding domain homologue C3B42_RS01295 PF01575 MaoC like domain C3B42_RS01300 PF00501 AMP-binding enzyme C3B42_RS01300 PF13193 AMP-binding enzyme C-terminal domain C3B42_RS01310 PF07728 AAA domain (dynein-related subfamily) C3B42_RS01310 PF12102 Domain of unknown function (DUF3578) C3B42_RS01325 PF02617 ATP-dependent Clp protease adaptor protein ClpS C3B42_RS01330 PF00004 ATPase family associated with various cellular activities (AAA) C3B42_RS01330 PF07724 AAA domain (Cdc48 subfamily) C3B42_RS01330 PF17871 AAA lid domain C3B42_RS01330 PF02861 Clp amino terminal domain, pathogenicity island component C3B42_RS01330 PF10431 C-terminal, D2-small domain, of ClpB protein C3B42_RS01365 PF00113 Enolase, C-terminal TIM barrel domain C3B42_RS01365 PF03952 Enolase, N-terminal domain C3B42_RS01380 PF07690 Major Facilitator Superfamily C3B42_RS01390 PF00164 Ribosomal protein S12/S23 C3B42_RS01395 PF00177 Ribosomal protein S7p/S5e C3B42_RS01400 PF00679 Elongation factor G C-terminus C3B42_RS01400 PF03144 Elongation factor Tu domain 2 C3B42_RS01400 PF14492 Elongation Factor G, domain II C3B42_RS01400 PF00009 Elongation factor Tu GTP binding domain C3B42_RS01400 PF03764 Elongation factor G, domain IV C3B42_RS01405 PF01513 ATP-NAD kinase C3B42_RS01410 PF13476 AAA domain C3B42_RS01415 PF17200 Single Cache domain 2 C3B42_RS01415 PF00672 HAMP domain C3B42_RS01415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01420 PF01136 Peptidase family U32 C3B42_RS01430 PF00731 AIR carboxylase C3B42_RS01440 PF02091 Glycyl-tRNA synthetase alpha subunit C3B42_RS01455 PF02390 Putative methyltransferase C3B42_RS01455 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C3B42_RS01460 PF00849 RNA pseudouridylate synthase C3B42_RS01465 PF02881 SRP54-type protein, helical bundle domain C3B42_RS01465 PF00448 SRP54-type protein, GTPase domain C3B42_RS01465 PF02978 Signal peptide binding domain C3B42_RS01470 PF00886 Ribosomal protein S16 C3B42_RS01480 PF01782 RimM N-terminal domain C3B42_RS01495 PF00460 Flagella basal body rod protein C3B42_RS01495 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B42_RS01500 PF00072 Response regulator receiver domain C3B42_RS01510 PF00460 Flagella basal body rod protein C3B42_RS01510 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B42_RS01515 PF00460 Flagella basal body rod protein C3B42_RS01520 PF08345 Flagellar M-ring protein C-terminal C3B42_RS01520 PF01514 Secretory protein of YscJ/FliF family C3B42_RS01525 PF01706 FliG C-terminal domain C3B42_RS01525 PF14841 FliG middle domain C3B42_RS01525 PF14842 FliG N-terminal domain C3B42_RS01535 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3B42_RS01545 PF07196 Flagellin hook IN motif C3B42_RS01545 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B42_RS01545 PF00460 Flagella basal body rod protein C3B42_RS01545 PF07559 Flagellar basal body protein FlaE C3B42_RS01550 PF07559 Flagellar basal body protein FlaE C3B42_RS01550 PF07196 Flagellin hook IN motif C3B42_RS01550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B42_RS01550 PF00460 Flagella basal body rod protein C3B42_RS01570 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3B42_RS01590 PF00448 SRP54-type protein, GTPase domain C3B42_RS01595 PF10609 NUBPL iron-transfer P-loop NTPase C3B42_RS01605 PF02049 Flagellar hook-basal body complex protein FliE C3B42_RS01610 PF00460 Flagella basal body rod protein C3B42_RS01610 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3B42_RS01625 PF01312 FlhB HrpN YscU SpaS Family C3B42_RS01635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B42_RS01635 PF18269 T3SS EscN ATPase C-terminal domain C3B42_RS01645 PF00771 FHIPEP family C3B42_RS01655 PF01613 Flavin reductase like domain C3B42_RS01665 PF02203 Tar ligand binding domain homologue C3B42_RS01665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01665 PF00672 HAMP domain C3B42_RS01670 PF00872 Transposase, Mutator family C3B42_RS01675 PF07943 Penicillin-binding protein 5, C-terminal domain C3B42_RS01675 PF00768 D-alanyl-D-alanine carboxypeptidase C3B42_RS01680 PF08447 PAS fold C3B42_RS01680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS01680 PF08448 PAS fold C3B42_RS01690 PF00672 HAMP domain C3B42_RS01690 PF02203 Tar ligand binding domain homologue C3B42_RS01690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01705 PF00072 Response regulator receiver domain C3B42_RS01705 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS01710 PF08668 HDOD domain C3B42_RS01715 PF02203 Tar ligand binding domain homologue C3B42_RS01715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01715 PF00672 HAMP domain C3B42_RS01720 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS01725 PF02203 Tar ligand binding domain homologue C3B42_RS01725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01725 PF00672 HAMP domain C3B42_RS01730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01730 PF08447 PAS fold C3B42_RS01735 PF02203 Tar ligand binding domain homologue C3B42_RS01735 PF00672 HAMP domain C3B42_RS01735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS01740 PF08267 Cobalamin-independent synthase, N-terminal domain C3B42_RS01740 PF01717 Cobalamin-independent synthase, Catalytic domain C3B42_RS01750 PF01746 tRNA (Guanine-1)-methyltransferase C3B42_RS01755 PF01245 Ribosomal protein L19 C3B42_RS01760 PF09335 SNARE associated Golgi protein C3B42_RS01765 PF00155 Aminotransferase class I and II C3B42_RS01770 PF12833 Helix-turn-helix domain C3B42_RS01780 PF01042 Endoribonuclease L-PSP C3B42_RS01795 PF08448 PAS fold C3B42_RS01795 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS01800 PF06719 AraC-type transcriptional regulator N-terminus C3B42_RS01800 PF12833 Helix-turn-helix domain C3B42_RS01810 PF00106 short chain dehydrogenase C3B42_RS01815 PF12706 Beta-lactamase superfamily domain C3B42_RS01825 PF06738 Putative threonine/serine exporter C3B42_RS01825 PF12821 Threonine/Serine exporter, ThrE C3B42_RS01830 PF06738 Putative threonine/serine exporter C3B42_RS01845 PF01618 MotA/TolQ/ExbB proton channel family C3B42_RS01850 PF02472 Biopolymer transport protein ExbD/TolR C3B42_RS01855 PF00171 Aldehyde dehydrogenase family C3B42_RS01860 PF02659 Putative manganese efflux pump C3B42_RS01875 PF00579 tRNA synthetases class I (W and Y) C3B42_RS01885 PF01594 AI-2E family transporter C3B42_RS01895 PF01634 ATP phosphoribosyltransferase C3B42_RS01900 PF03309 Type III pantothenate kinase C3B42_RS01925 PF05538 Campylobacter major outer membrane protein C3B42_RS01930 PF01202 Shikimate kinase C3B42_RS01935 PF00815 Histidinol dehydrogenase C3B42_RS01945 PF00348 Polyprenyl synthetase C3B42_RS01950 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C3B42_RS01950 PF01488 Shikimate / quinate 5-dehydrogenase C3B42_RS01950 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C3B42_RS01955 PF03129 Anticodon binding domain C3B42_RS01955 PF04073 Aminoacyl-tRNA editing domain C3B42_RS01955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3B42_RS01960 PF05552 Conserved TM helix C3B42_RS01960 PF00924 Mechanosensitive ion channel C3B42_RS01965 PF12627 Probable RNA and SrmB- binding site of polymerase A C3B42_RS01965 PF01743 Poly A polymerase head domain C3B42_RS01965 PF01966 HD domain C3B42_RS01975 PF02699 Preprotein translocase subunit C3B42_RS01980 PF02355 Protein export membrane protein C3B42_RS01985 PF07549 SecD/SecF GG Motif C3B42_RS01985 PF02355 Protein export membrane protein C3B42_RS02000 PF00691 OmpA family C3B42_RS02000 PF13677 Membrane MotB of proton-channel complex MotA/MotB C3B42_RS02005 PF01618 MotA/TolQ/ExbB proton channel family C3B42_RS02015 PF00133 tRNA synthetases class I (I, L, M and V) C3B42_RS02015 PF13603 Leucyl-tRNA synthetase, Domain 2 C3B42_RS02015 PF09334 tRNA synthetases class I (M) C3B42_RS02025 PF08245 Mur ligase middle domain C3B42_RS02050 PF02559 CarD-like/TRCF domain C3B42_RS02050 PF00270 DEAD/DEAH box helicase C3B42_RS02050 PF00271 Helicase conserved C-terminal domain C3B42_RS02050 PF03461 TRCF domain C3B42_RS02050 PF17757 UvrB interaction domain C3B42_RS02060 PF01381 Helix-turn-helix C3B42_RS02100 PF08360 QacR-like protein, C-terminal region C3B42_RS02100 PF00440 Bacterial regulatory proteins, tetR family C3B42_RS02130 PF00912 Transglycosylase C3B42_RS02130 PF00905 Penicillin binding protein transpeptidase domain C3B42_RS02135 PF00005 ABC transporter C3B42_RS02135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3B42_RS02140 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C3B42_RS02140 PF01676 Metalloenzyme superfamily C3B42_RS02145 PF00953 Glycosyl transferase family 4 C3B42_RS02145 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C3B42_RS02150 PF08245 Mur ligase middle domain C3B42_RS02175 PF00009 Elongation factor Tu GTP binding domain C3B42_RS02175 PF03144 Elongation factor Tu domain 2 C3B42_RS02175 PF03143 Elongation factor Tu C-terminal domain C3B42_RS02180 PF00471 Ribosomal protein L33 C3B42_RS02195 PF02357 Transcription termination factor nusG C3B42_RS02200 PF00298 Ribosomal protein L11, RNA binding domain C3B42_RS02200 PF03946 Ribosomal protein L11, N-terminal domain C3B42_RS02205 PF00687 Ribosomal protein L1p/L10e family C3B42_RS02210 PF00466 Ribosomal protein L10 C3B42_RS02215 PF00542 Ribosomal protein L7/L12 C-terminal domain C3B42_RS02215 PF16320 Ribosomal protein L7/L12 dimerisation domain C3B42_RS02220 PF04563 RNA polymerase beta subunit C3B42_RS02220 PF04561 RNA polymerase Rpb2, domain 2 C3B42_RS02220 PF04565 RNA polymerase Rpb2, domain 3 C3B42_RS02220 PF10385 RNA polymerase beta subunit external 1 domain C3B42_RS02220 PF00562 RNA polymerase Rpb2, domain 6 C3B42_RS02220 PF04560 RNA polymerase Rpb2, domain 7 C3B42_RS02225 PF04997 RNA polymerase Rpb1, domain 1 C3B42_RS02225 PF00623 RNA polymerase Rpb1, domain 2 C3B42_RS02225 PF04983 RNA polymerase Rpb1, domain 3 C3B42_RS02225 PF05000 RNA polymerase Rpb1, domain 4 C3B42_RS02225 PF04998 RNA polymerase Rpb1, domain 5 C3B42_RS02245 PF00255 Glutathione peroxidase C3B42_RS02250 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3B42_RS02250 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C3B42_RS02250 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C3B42_RS02255 PF00374 Nickel-dependent hydrogenase C3B42_RS02260 PF01292 Prokaryotic cytochrome b561 C3B42_RS02265 PF01750 Hydrogenase maturation protease C3B42_RS02275 PF03814 Potassium-transporting ATPase A subunit C3B42_RS02285 PF02669 K+-transporting ATPase, c chain C3B42_RS02290 PF02702 Osmosensitive K+ channel His kinase sensor domain C3B42_RS02290 PF13493 Domain of unknown function (DUF4118) C3B42_RS02290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS02290 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS02295 PF02702 Osmosensitive K+ channel His kinase sensor domain C3B42_RS02295 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS02295 PF13493 Domain of unknown function (DUF4118) C3B42_RS02295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS02300 PF00072 Response regulator receiver domain C3B42_RS02300 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS02305 PF00708 Acylphosphatase C3B42_RS02305 PF17788 HypF Kae1-like domain C3B42_RS02305 PF01300 Telomere recombination C3B42_RS02305 PF07503 HypF finger C3B42_RS02320 PF02492 CobW/HypB/UreG, nucleotide-binding domain C3B42_RS02325 PF01455 HupF/HypC family C3B42_RS02330 PF01924 Hydrogenase formation hypA family C3B42_RS02345 PF00586 AIR synthase related protein, N-terminal domain C3B42_RS02345 PF02769 AIR synthase related protein, C-terminal domain C3B42_RS02350 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA C3B42_RS02360 PF01891 Cobalt uptake substrate-specific transmembrane region C3B42_RS02360 PF13190 PDGLE domain C3B42_RS02375 PF00005 ABC transporter C3B42_RS02390 PF01555 DNA methylase C3B42_RS02395 PF00793 DAHP synthetase I family C3B42_RS02405 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3B42_RS02415 PF03631 Virulence factor BrkB C3B42_RS02420 PF01565 FAD binding domain C3B42_RS02420 PF02913 FAD linked oxidases, C-terminal domain C3B42_RS02430 PF00578 AhpC/TSA family C3B42_RS02435 PF13649 Methyltransferase domain C3B42_RS02440 PF06574 FAD synthetase C3B42_RS02440 PF01687 Riboflavin kinase C3B42_RS02445 PF01728 FtsJ-like methyltransferase C3B42_RS02445 PF01479 S4 domain C3B42_RS02465 PF09186 Domain of unknown function (DUF1949) C3B42_RS02465 PF01205 Uncharacterized protein family UPF0029 C3B42_RS02485 PF00459 Inositol monophosphatase family C3B42_RS02490 PF00037 4Fe-4S binding domain C3B42_RS02500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3B42_RS02525 PF00483 Nucleotidyl transferase C3B42_RS02530 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C3B42_RS02535 PF04321 RmlD substrate binding domain C3B42_RS02540 PF16363 GDP-mannose 4,6 dehydratase C3B42_RS02545 PF00535 Glycosyl transferase family 2 C3B42_RS02560 PF03062 MBOAT, membrane-bound O-acyltransferase family C3B42_RS02575 PF03062 MBOAT, membrane-bound O-acyltransferase family C3B42_RS02590 PF05523 WxcM-like, C-terminal C3B42_RS02595 PF00132 Bacterial transferase hexapeptide (six repeats) C3B42_RS02600 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B42_RS02605 PF00535 Glycosyl transferase family 2 C3B42_RS02615 PF13439 Glycosyltransferase Family 4 C3B42_RS02615 PF00534 Glycosyl transferases group 1 C3B42_RS02630 PF00535 Glycosyl transferase family 2 C3B42_RS02640 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C3B42_RS02655 PF13580 SIS domain C3B42_RS02660 PF01467 Cytidylyltransferase-like C3B42_RS02660 PF00294 pfkB family carbohydrate kinase C3B42_RS02665 PF01370 NAD dependent epimerase/dehydratase family C3B42_RS02680 PF00830 Ribosomal L28 family C3B42_RS02690 PF01960 ArgJ family C3B42_RS02700 PF03989 DNA gyrase C-terminal domain, beta-propeller C3B42_RS02700 PF00521 DNA gyrase/topoisomerase IV, subunit A C3B42_RS02705 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3B42_RS02705 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3B42_RS02715 PF01208 Uroporphyrinogen decarboxylase (URO-D) C3B42_RS02760 PF00005 ABC transporter C3B42_RS02785 PF00149 Calcineurin-like phosphoesterase C3B42_RS02790 PF00072 Response regulator receiver domain C3B42_RS02790 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS02800 PF00005 ABC transporter C3B42_RS02805 PF00950 ABC 3 transport family C3B42_RS02815 PF08534 Redoxin C3B42_RS02835 PF08264 Anticodon-binding domain of tRNA C3B42_RS02835 PF10458 Valyl tRNA synthetase tRNA binding arm C3B42_RS02835 PF00133 tRNA synthetases class I (I, L, M and V) C3B42_RS02855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS02855 PF08447 PAS fold C3B42_RS02855 PF13426 PAS domain C3B42_RS02865 PF07690 Major Facilitator Superfamily C3B42_RS02870 PF01725 Ham1 family C3B42_RS02890 PF03807 NADP oxidoreductase coenzyme F420-dependent C3B42_RS02890 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3B42_RS02900 PF13525 Outer membrane lipoprotein C3B42_RS02905 PF05362 Lon protease (S16) C-terminal proteolytic domain C3B42_RS02905 PF02190 ATP-dependent protease La (LON) substrate-binding domain C3B42_RS02905 PF00004 ATPase family associated with various cellular activities (AAA) C3B42_RS02915 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3B42_RS02935 PF02785 Biotin carboxylase C-terminal domain C3B42_RS02935 PF00289 Biotin carboxylase, N-terminal domain C3B42_RS02935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3B42_RS02945 PF02657 Fe-S metabolism associated domain C3B42_RS02950 PF00266 Aminotransferase class-V C3B42_RS02960 PF00005 ABC transporter C3B42_RS02965 PF01458 Uncharacterized protein family (UPF0051) C3B42_RS02970 PF04324 BFD-like [2Fe-2S] binding domain C3B42_RS02970 PF01592 NifU-like N terminal domain C3B42_RS02970 PF01106 NifU-like domain C3B42_RS02980 PF07694 5TMR of 5TMR-LYT C3B42_RS02980 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS02985 PF14698 Argininosuccinate lyase C-terminal C3B42_RS02985 PF00206 Lyase C3B42_RS02990 PF12344 Ultra-violet resistance protein B C3B42_RS02990 PF17757 UvrB interaction domain C3B42_RS02990 PF00271 Helicase conserved C-terminal domain C3B42_RS02990 PF04851 Type III restriction enzyme, res subunit C3B42_RS02990 PF02151 UvrB/uvrC motif C3B42_RS03000 PF01272 Transcription elongation factor, GreA/GreB, C-term C3B42_RS03000 PF03449 Transcription elongation factor, N-terminal C3B42_RS03005 PF00899 ThiF family C3B42_RS03010 PF01584 CheW-like domain C3B42_RS03010 PF00072 Response regulator receiver domain C3B42_RS03020 PF14659 Phage integrase, N-terminal SAM-like domain C3B42_RS03020 PF00589 Phage integrase family C3B42_RS03110 PF00872 Transposase, Mutator family C3B42_RS03115 PF02661 Fic/DOC family C3B42_RS03115 PF12728 Helix-turn-helix domain C3B42_RS03125 PF02661 Fic/DOC family C3B42_RS03145 PF05101 Type IV secretory pathway, VirB3-like protein C3B42_RS03155 PF10576 Iron-sulfur binding domain of endonuclease III C3B42_RS03155 PF00633 Helix-hairpin-helix motif C3B42_RS03155 PF00730 HhH-GPD superfamily base excision DNA repair protein C3B42_RS03160 PF00586 AIR synthase related protein, N-terminal domain C3B42_RS03160 PF02769 AIR synthase related protein, C-terminal domain C3B42_RS03165 PF01142 tRNA pseudouridine synthase D (TruD) C3B42_RS03175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS03175 PF02203 Tar ligand binding domain homologue C3B42_RS03175 PF00672 HAMP domain C3B42_RS03180 PF07499 RuvA, C-terminal domain C3B42_RS03180 PF01330 RuvA N terminal domain C3B42_RS03185 PF07478 D-ala D-ala ligase C-terminus C3B42_RS03185 PF01820 D-ala D-ala ligase N-terminus C3B42_RS03195 PF08245 Mur ligase middle domain C3B42_RS03195 PF02875 Mur ligase family, glutamate ligase domain C3B42_RS03305 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C3B42_RS03310 PF01029 NusB family C3B42_RS03315 PF00885 6,7-dimethyl-8-ribityllumazine synthase C3B42_RS03330 PF02875 Mur ligase family, glutamate ligase domain C3B42_RS03330 PF08245 Mur ligase middle domain C3B42_RS03330 PF08443 RimK-like ATP-grasp domain C3B42_RS03345 PF00072 Response regulator receiver domain C3B42_RS03345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS03345 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS03345 PF09456 RcsC Alpha-Beta-Loop (ABL) C3B42_RS03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS03350 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS03355 PF00120 Glutamine synthetase, catalytic domain C3B42_RS03355 PF03951 Glutamine synthetase, beta-Grasp domain C3B42_RS03365 PF02391 MoaE protein C3B42_RS03375 PF02621 Menaquinone biosynthesis C3B42_RS03380 PF02673 Bacitracin resistance protein BacA C3B42_RS03385 PF01966 HD domain C3B42_RS03410 PF13419 Haloacid dehalogenase-like hydrolase C3B42_RS03415 PF02463 RecF/RecN/SMC N terminal domain C3B42_RS03445 PF01467 Cytidylyltransferase-like C3B42_RS03465 PF04101 Glycosyltransferase family 28 C-terminal domain C3B42_RS03465 PF03033 Glycosyltransferase family 28 N-terminal domain C3B42_RS03470 PF01098 Cell cycle protein C3B42_RS03475 PF03717 Penicillin-binding Protein dimerisation domain C3B42_RS03475 PF00905 Penicillin binding protein transpeptidase domain C3B42_RS03475 PF03793 PASTA domain C3B42_RS03480 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3B42_RS03485 PF03150 Di-haem cytochrome c peroxidase C3B42_RS03490 PF04116 Fatty acid hydroxylase superfamily C3B42_RS03515 PF00137 ATP synthase subunit C C3B42_RS03530 PF00005 ABC transporter C3B42_RS03535 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS03540 PF03480 Bacterial extracellular solute-binding protein, family 7 C3B42_RS03545 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component C3B42_RS03550 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component C3B42_RS03560 PF00072 Response regulator receiver domain C3B42_RS03570 PF00563 EAL domain C3B42_RS03570 PF01590 GAF domain C3B42_RS03570 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS03570 PF00360 Phytochrome region C3B42_RS03585 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS03585 PF00072 Response regulator receiver domain C3B42_RS03600 PF00672 HAMP domain C3B42_RS03600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS03600 PF02203 Tar ligand binding domain homologue C3B42_RS03605 PF00072 Response regulator receiver domain C3B42_RS03605 PF00158 Sigma-54 interaction domain C3B42_RS03605 PF02954 Bacterial regulatory protein, Fis family C3B42_RS03610 PF13581 Histidine kinase-like ATPase domain C3B42_RS03610 PF13426 PAS domain C3B42_RS03610 PF07536 HWE histidine kinase C3B42_RS03615 PF13426 PAS domain C3B42_RS03615 PF13188 PAS domain C3B42_RS03615 PF00989 PAS fold C3B42_RS03615 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS03615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS03620 PF13277 YmdB-like protein C3B42_RS03635 PF01209 ubiE/COQ5 methyltransferase family C3B42_RS03640 PF13742 OB-fold nucleic acid binding domain C3B42_RS03640 PF02601 Exonuclease VII, large subunit C3B42_RS03645 PF01584 CheW-like domain C3B42_RS03650 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3B42_RS03655 PF02261 Aspartate decarboxylase C3B42_RS03660 PF02575 YbaB/EbfC DNA-binding family C3B42_RS03665 PF00348 Polyprenyl synthetase C3B42_RS03670 PF00166 Chaperonin 10 Kd subunit C3B42_RS03675 PF00118 TCP-1/cpn60 chaperonin family C3B42_RS03680 PF00768 D-alanyl-D-alanine carboxypeptidase C3B42_RS03680 PF07943 Penicillin-binding protein 5, C-terminal domain C3B42_RS03685 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS03695 PF02472 Biopolymer transport protein ExbD/TolR C3B42_RS03700 PF01618 MotA/TolQ/ExbB proton channel family C3B42_RS03715 PF00005 ABC transporter C3B42_RS03715 PF02687 FtsX-like permease family C3B42_RS03715 PF12704 MacB-like periplasmic core domain C3B42_RS03720 PF00005 ABC transporter C3B42_RS03720 PF02687 FtsX-like permease family C3B42_RS03720 PF12704 MacB-like periplasmic core domain C3B42_RS03725 PF01351 Ribonuclease HII C3B42_RS03730 PF00004 ATPase family associated with various cellular activities (AAA) C3B42_RS03730 PF10431 C-terminal, D2-small domain, of ClpB protein C3B42_RS03730 PF02861 Clp amino terminal domain, pathogenicity island component C3B42_RS03730 PF17871 AAA lid domain C3B42_RS03730 PF07724 AAA domain (Cdc48 subfamily) C3B42_RS03735 PF00468 Ribosomal protein L34 C3B42_RS03740 PF00825 Ribonuclease P C3B42_RS03745 PF01809 Putative membrane protein insertion efficiency factor C3B42_RS03750 PF02096 60Kd inner membrane protein C3B42_RS03750 PF14849 YidC periplasmic domain C3B42_RS03760 PF01926 50S ribosome-binding GTPase C3B42_RS03760 PF12631 MnmE helical domain C3B42_RS03760 PF10396 GTP-binding protein TrmE N-terminus C3B42_RS03770 PF00300 Histidine phosphatase superfamily (branch 1) C3B42_RS03780 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS03780 PF17158 Membrane-associated sensor, integral membrane domain C3B42_RS03790 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C3B42_RS03795 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C3B42_RS03810 PF00464 Serine hydroxymethyltransferase C3B42_RS03815 PF00152 tRNA synthetases class II (D, K and N) C3B42_RS03815 PF01336 OB-fold nucleic acid binding domain C3B42_RS03825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS03825 PF08448 PAS fold C3B42_RS03825 PF08447 PAS fold C3B42_RS03830 PF04551 GcpE protein C3B42_RS03835 PF00772 DnaB-like helicase N terminal domain C3B42_RS03835 PF03796 DnaB-like helicase C terminal domain C3B42_RS03840 PF07963 Prokaryotic N-terminal methylation motif C3B42_RS03840 PF08334 Type II secretion system (T2SS), protein G C3B42_RS03845 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B42_RS03855 PF00593 TonB dependent receptor C3B42_RS03855 PF07715 TonB-dependent Receptor Plug Domain C3B42_RS03860 PF07715 TonB-dependent Receptor Plug Domain C3B42_RS03860 PF00593 TonB dependent receptor C3B42_RS03880 PF00756 Putative esterase C3B42_RS03885 PF13847 Methyltransferase domain C3B42_RS03905 PF02554 Carbon starvation protein CstA C3B42_RS03905 PF13722 5TM C-terminal transporter carbon starvation CstA C3B42_RS03910 PF05191 Adenylate kinase, active site lid C3B42_RS03925 PF00155 Aminotransferase class I and II C3B42_RS03930 PF06719 AraC-type transcriptional regulator N-terminus C3B42_RS03930 PF12833 Helix-turn-helix domain C3B42_RS03945 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C3B42_RS03955 PF07690 Major Facilitator Superfamily C3B42_RS03960 PF00465 Iron-containing alcohol dehydrogenase C3B42_RS03965 PF00842 Alanine racemase, C-terminal domain C3B42_RS03965 PF01168 Alanine racemase, N-terminal domain C3B42_RS03970 PF02151 UvrB/uvrC motif C3B42_RS03970 PF08459 UvrC Helix-hairpin-helix N-terminal C3B42_RS03970 PF01541 GIY-YIG catalytic domain C3B42_RS03975 PF02203 Tar ligand binding domain homologue C3B42_RS03975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS03975 PF00672 HAMP domain C3B42_RS03980 PF00873 AcrB/AcrD/AcrF family C3B42_RS03985 PF00529 HlyD membrane-fusion protein of T1SS C3B42_RS03985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B42_RS04000 PF00072 Response regulator receiver domain C3B42_RS04000 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS04005 PF08447 PAS fold C3B42_RS04005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS04005 PF08448 PAS fold C3B42_RS04010 PF00578 AhpC/TSA family C3B42_RS04015 PF00873 AcrB/AcrD/AcrF family C3B42_RS04020 PF00873 AcrB/AcrD/AcrF family C3B42_RS04025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion C3B42_RS04035 PF11849 Domain of unknown function (DUF3369) C3B42_RS04040 PF00813 FliP family C3B42_RS04045 PF00905 Penicillin binding protein transpeptidase domain C3B42_RS04045 PF03717 Penicillin-binding Protein dimerisation domain C3B42_RS04065 PF00005 ABC transporter C3B42_RS04070 PF02390 Putative methyltransferase C3B42_RS04080 PF00849 RNA pseudouridylate synthase C3B42_RS04080 PF01479 S4 domain C3B42_RS04085 PF01098 Cell cycle protein C3B42_RS04095 PF00202 Aminotransferase class-III C3B42_RS04100 PF06865 Pyrimidine/purine nucleoside phosphorylase C3B42_RS04180 PF00174 Oxidoreductase molybdopterin binding domain C3B42_RS04185 PF02254 TrkA-N domain C3B42_RS04185 PF02080 TrkA-C domain C3B42_RS04185 PF00999 Sodium/hydrogen exchanger family C3B42_RS04190 PF13361 UvrD-like helicase C-terminal domain C3B42_RS04190 PF00580 UvrD/REP helicase N-terminal domain C3B42_RS04195 PF02769 AIR synthase related protein, C-terminal domain C3B42_RS04195 PF00586 AIR synthase related protein, N-terminal domain C3B42_RS04200 PF01841 Transglutaminase-like superfamily C3B42_RS04220 PF00072 Response regulator receiver domain C3B42_RS04220 PF00158 Sigma-54 interaction domain C3B42_RS04220 PF02954 Bacterial regulatory protein, Fis family C3B42_RS04250 PF01568 Molydopterin dinucleotide binding domain C3B42_RS04250 PF00384 Molybdopterin oxidoreductase C3B42_RS04255 PF01568 Molydopterin dinucleotide binding domain C3B42_RS04255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3B42_RS04255 PF00384 Molybdopterin oxidoreductase C3B42_RS04260 PF13247 4Fe-4S dicluster domain C3B42_RS04270 PF02634 FdhD/NarQ family C3B42_RS04275 PF00266 Aminotransferase class-V C3B42_RS04280 PF00994 Probable molybdopterin binding domain C3B42_RS04280 PF03454 MoeA C-terminal region (domain IV) C3B42_RS04280 PF03453 MoeA N-terminal region (domain I and II) C3B42_RS04290 PF12823 Domain of unknown function (DUF3817) C3B42_RS04300 PF05661 Protein of unknown function (DUF808) C3B42_RS04305 PF01522 Polysaccharide deacetylase C3B42_RS04315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3B42_RS04315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3B42_RS04340 PF17764 3′ DNA-binding domain (3′BD) C3B42_RS04340 PF18074 Primosomal protein N C-terminal domain C3B42_RS04340 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C3B42_RS04340 PF00270 DEAD/DEAH box helicase C3B42_RS04340 PF00271 Helicase conserved C-terminal domain C3B42_RS04345 PF14602 Hexapeptide repeat of succinyl-transferase C3B42_RS04345 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle C3B42_RS04350 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding C3B42_RS04350 PF18381 YcaO cyclodehydratase C-terminal domain C3B42_RS04355 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3B42_RS04355 PF12833 Helix-turn-helix domain C3B42_RS04355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3B42_RS04355 PF02805 Metal binding domain of Ada C3B42_RS04360 PF00464 Serine hydroxymethyltransferase C3B42_RS04375 PF03471 Transporter associated domain C3B42_RS04375 PF00571 CBS domain C3B42_RS04380 PF01594 AI-2E family transporter C3B42_RS04405 PF01594 AI-2E family transporter C3B42_RS04410 PF05491 RuvB C-terminal winged helix domain C3B42_RS04410 PF17864 RuvB AAA lid domain C3B42_RS04410 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3B42_RS04415 PF02548 Ketopantoate hydroxymethyltransferase C3B42_RS04420 PF00290 Tryptophan synthase alpha chain C3B42_RS04425 PF04377 Arginine-tRNA-protein transferase, C terminus C3B42_RS04425 PF04376 Arginine-tRNA-protein transferase, N terminus C3B42_RS04435 PF02421 Ferrous iron transport protein B C3B42_RS04435 PF07664 Ferrous iron transport protein B C terminus C3B42_RS04435 PF07670 Nucleoside recognition C3B42_RS04440 PF07670 Nucleoside recognition C3B42_RS04440 PF02421 Ferrous iron transport protein B C3B42_RS04440 PF07664 Ferrous iron transport protein B C terminus C3B42_RS04450 PF01475 Ferric uptake regulator family C3B42_RS04455 PF00764 Arginosuccinate synthase C3B42_RS04460 PF12911 N-terminal TM domain of oligopeptide transport permease C C3B42_RS04460 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS04470 PF12072 Domain of unknown function (DUF3552) C3B42_RS04470 PF00013 KH domain C3B42_RS04470 PF01966 HD domain C3B42_RS04475 PF01812 5-formyltetrahydrofolate cyclo-ligase family C3B42_RS04485 PF00448 SRP54-type protein, GTPase domain C3B42_RS04505 PF02525 Flavodoxin-like fold C3B42_RS04510 PF00881 Nitroreductase family C3B42_RS04520 PF12848 ABC transporter C3B42_RS04520 PF00005 ABC transporter C3B42_RS04525 PF03061 Thioesterase superfamily C3B42_RS04530 PF02203 Tar ligand binding domain homologue C3B42_RS04530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS04530 PF00672 HAMP domain C3B42_RS04540 PF00226 DnaJ domain C3B42_RS04540 PF01556 DnaJ C terminal domain C3B42_RS04540 PF00684 DnaJ central domain C3B42_RS04545 PF01556 DnaJ C terminal domain C3B42_RS04545 PF00226 DnaJ domain C3B42_RS04545 PF00684 DnaJ central domain C3B42_RS04550 PF00933 Glycosyl hydrolase family 3 N terminal domain C3B42_RS04560 PF00106 short chain dehydrogenase C3B42_RS04570 PF02885 Glycosyl transferase family, helical bundle domain C3B42_RS04570 PF00591 Glycosyl transferase family, a/b domain C3B42_RS04575 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C3B42_RS04580 PF00005 ABC transporter C3B42_RS04580 PF12399 Branched-chain amino acid ATP-binding cassette transporter C3B42_RS04585 PF02348 Cytidylyltransferase C3B42_RS04595 PF01339 CheB methylesterase C3B42_RS04595 PF00072 Response regulator receiver domain C3B42_RS04605 PF09411 Lipid A 3-O-deacylase (PagL) C3B42_RS04610 PF01790 Prolipoprotein diacylglyceryl transferase C3B42_RS04620 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS04620 PF00072 Response regulator receiver domain C3B42_RS04645 PF00893 Small Multidrug Resistance protein C3B42_RS04650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS04655 PF00072 Response regulator receiver domain C3B42_RS04655 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS04665 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3B42_RS04675 PF00330 Aconitase family (aconitate hydratase) C3B42_RS04675 PF06434 Aconitate hydratase 2 N-terminus C3B42_RS04675 PF11791 Aconitate B N-terminal domain C3B42_RS04680 PF00156 Phosphoribosyl transferase domain C3B42_RS04685 PF04241 Protein of unknown function (DUF423) C3B42_RS04690 PF04461 Protein of unknown function (DUF520) C3B42_RS04695 PF00293 NUDIX domain C3B42_RS04730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3B42_RS04730 PF00925 GTP cyclohydrolase II C3B42_RS04745 PF01293 Phosphoenolpyruvate carboxykinase C3B42_RS04760 PF09334 tRNA synthetases class I (M) C3B42_RS04760 PF01588 Putative tRNA binding domain C3B42_RS04760 PF00133 tRNA synthetases class I (I, L, M and V) C3B42_RS04770 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain C3B42_RS04795 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3B42_RS04800 PF05193 Peptidase M16 inactive domain C3B42_RS04805 PF04055 Radical SAM superfamily C3B42_RS04810 PF01103 Surface antigen C3B42_RS04810 PF07244 Surface antigen variable number repeat C3B42_RS04815 PF01842 ACT domain C3B42_RS04815 PF02153 Prephenate dehydrogenase C3B42_RS04830 PF00384 Molybdopterin oxidoreductase C3B42_RS04830 PF01568 Molydopterin dinucleotide binding domain C3B42_RS04830 PF18364 Molybdopterin oxidoreductase N-terminal domain C3B42_RS04835 PF00009 Elongation factor Tu GTP binding domain C3B42_RS04835 PF03144 Elongation factor Tu domain 2 C3B42_RS04835 PF09105 Elongation factor SelB, winged helix C3B42_RS04835 PF09106 Elongation factor SelB, winged helix C3B42_RS04835 PF09107 Elongation factor SelB, winged helix C3B42_RS04840 PF03841 L-seryl-tRNA selenium transferase C3B42_RS04875 PF06067 Domain of unknown function (DUF932) C3B42_RS04915 PF01555 DNA methylase C3B42_RS04915 PF18273 Type III R-M EcoP15I C-terminal domain C3B42_RS04920 PF13166 AAA domain C3B42_RS04940 PF08774 VRR-NUC domain C3B42_RS04940 PF04851 Type III restriction enzyme, res subunit C3B42_RS04950 PF02253 Phospholipase A1 C3B42_RS04955 PF00834 Ribulose-phosphate 3 epimerase family C3B42_RS04960 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C3B42_RS04965 PF14480 DNA polymerase III polC-type N-terminus I C3B42_RS04965 PF11490 DNA polymerase III polC-type N-terminus II C3B42_RS04965 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3B42_RS04965 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3B42_RS04965 PF02811 PHP domain C3B42_RS04965 PF14579 Helix-hairpin-helix motif C3B42_RS04965 PF00929 Exonuclease C3B42_RS04975 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B42_RS04980 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C3B42_RS04980 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C3B42_RS04980 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C3B42_RS04990 PF05175 Methyltransferase small domain C3B42_RS04995 PF03692 Putative zinc- or iron-chelating domain C3B42_RS05005 PF00218 Indole-3-glycerol phosphate synthase C3B42_RS05010 PF03466 LysR substrate binding domain C3B42_RS05010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B42_RS05015 PF01361 Tautomerase enzyme C3B42_RS05020 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS05030 PF04225 Opacity-associated protein A LysM-like domain C3B42_RS05030 PF01551 Peptidase family M23 C3B42_RS05035 PF09424 Yqey-like protein C3B42_RS05040 PF12848 ABC transporter C3B42_RS05040 PF16326 ABC transporter C-terminal domain C3B42_RS05040 PF00005 ABC transporter C3B42_RS05045 PF13662 Toprim domain C3B42_RS05045 PF02132 RecR protein C3B42_RS05065 PF00248 Aldo/keto reductase family C3B42_RS05070 PF02416 mttA/Hcf106 family C3B42_RS05075 PF00902 Sec-independent protein translocase protein (TatC) C3B42_RS05080 PF02547 Queuosine biosynthesis protein C3B42_RS05085 PF13307 Helicase C-terminal domain C3B42_RS05085 PF00929 Exonuclease C3B42_RS05090 PF00226 DnaJ domain C3B42_RS05090 PF05099 Tellurite resistance protein TerB C3B42_RS05105 PF02540 NAD synthase C3B42_RS05110 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B42_RS05115 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C3B42_RS05120 PF03741 Integral membrane protein TerC family C3B42_RS05125 PF13411 MerR HTH family regulatory protein C3B42_RS05130 PF00226 DnaJ domain C3B42_RS05130 PF01556 DnaJ C terminal domain C3B42_RS05135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS05135 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS05135 PF00989 PAS fold C3B42_RS05135 PF08447 PAS fold C3B42_RS05145 PF00072 Response regulator receiver domain C3B42_RS05165 PF00216 Bacterial DNA-binding protein C3B42_RS05175 PF01795 MraW methylase family C3B42_RS05205 PF00056 lactate/malate dehydrogenase, NAD binding domain C3B42_RS05205 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3B42_RS05210 PF03971 Monomeric isocitrate dehydrogenase C3B42_RS05215 PF02618 YceG-like family C3B42_RS05225 PF00488 MutS domain V C3B42_RS05225 PF01713 Smr domain C3B42_RS05230 PF00571 CBS domain C3B42_RS05230 PF03471 Transporter associated domain C3B42_RS05230 PF01595 Cyclin M transmembrane N-terminal domain C3B42_RS05240 PF00005 ABC transporter C3B42_RS05245 PF01113 Dihydrodipicolinate reductase, N-terminus C3B42_RS05245 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain C3B42_RS05250 PF03473 MOSC domain C3B42_RS05255 PF00202 Aminotransferase class-III C3B42_RS05265 PF03594 Benzoate membrane transport protein C3B42_RS05275 PF04055 Radical SAM superfamily C3B42_RS05275 PF06969 HemN C-terminal domain C3B42_RS05280 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3B42_RS05280 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3B42_RS05290 PF07568 Histidine kinase C3B42_RS05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS05290 PF12282 Signal transduction histidine kinase C3B42_RS05315 PF03477 ATP cone domain C3B42_RS05315 PF02867 Ribonucleotide reductase, barrel domain C3B42_RS05315 PF00317 Ribonucleotide reductase, all-alpha domain C3B42_RS05330 PF00809 Pterin binding enzyme C3B42_RS05345 PF01842 ACT domain C3B42_RS05345 PF13840 ACT domain C3B42_RS05345 PF00696 Amino acid kinase family C3B42_RS05350 PF00293 NUDIX domain C3B42_RS05355 PF06969 HemN C-terminal domain C3B42_RS05355 PF04055 Radical SAM superfamily C3B42_RS05360 PF17827 PrmC N-terminal domain C3B42_RS05360 PF05175 Methyltransferase small domain C3B42_RS05365 PF01432 Peptidase family M3 C3B42_RS05385 PF01590 GAF domain C3B42_RS05385 PF00563 EAL domain C3B42_RS05385 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS05385 PF00360 Phytochrome region C3B42_RS05390 PF03061 Thioesterase superfamily C3B42_RS05395 PF13091 PLD-like domain C3B42_RS05400 PF01435 Peptidase family M48 C3B42_RS05400 PF16491 CAAX prenyl protease N-terminal, five membrane helices C3B42_RS05410 PF04228 Putative neutral zinc metallopeptidase C3B42_RS05420 PF00994 Probable molybdopterin binding domain C3B42_RS05420 PF03454 MoeA C-terminal region (domain IV) C3B42_RS05420 PF03453 MoeA N-terminal region (domain I and II) C3B42_RS05430 PF01171 PP-loop family C3B42_RS05450 PF01066 CDP-alcohol phosphatidyltransferase C3B42_RS05455 PF02541 Ppx/GppA phosphatase family C3B42_RS05465 PF00205 Thiamine pyrophosphate enzyme, central domain C3B42_RS05465 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3B42_RS05465 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3B42_RS05470 PF10369 Small subunit of acetolactate synthase C3B42_RS05475 PF00132 Bacterial transferase hexapeptide (six repeats) C3B42_RS05475 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C3B42_RS05480 PF17854 FtsK alpha domain C3B42_RS05480 PF09397 Ftsk gamma domain C3B42_RS05480 PF01580 FtsK/SpoIIIE family C3B42_RS05495 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C3B42_RS05495 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C3B42_RS05500 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C3B42_RS05500 PF01926 50S ribosome-binding GTPase C3B42_RS05505 PF01740 STAS domain C3B42_RS05505 PF00916 Sulfate permease family C3B42_RS05515 PF02844 Phosphoribosylglycinamide synthetase, N domain C3B42_RS05515 PF02843 Phosphoribosylglycinamide synthetase, C domain C3B42_RS05515 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C3B42_RS05520 PF06271 RDD family C3B42_RS05525 PF04453 LPS transport system D C3B42_RS05525 PF03968 OstA-like protein C3B42_RS05535 PF00575 S1 RNA binding domain C3B42_RS05535 PF03725 3' exoribonuclease family, domain 2 C3B42_RS05535 PF00013 KH domain C3B42_RS05535 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C3B42_RS05535 PF01138 3' exoribonuclease family, domain 1 C3B42_RS05540 PF00072 Response regulator receiver domain C3B42_RS05545 PF01584 CheW-like domain C3B42_RS05545 PF09078 CheY binding C3B42_RS05545 PF02895 Signal transducing histidine kinase, homodimeric domain C3B42_RS05545 PF01627 Hpt domain C3B42_RS05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS05550 PF01739 CheR methyltransferase, SAM binding domain C3B42_RS05550 PF03705 CheR methyltransferase, all-alpha domain C3B42_RS05555 PF03975 CheD chemotactic sensory transduction C3B42_RS05560 PF01339 CheB methylesterase C3B42_RS05560 PF00072 Response regulator receiver domain C3B42_RS05565 PF00589 Phage integrase family C3B42_RS05565 PF18644 Phage integrase SAM-like domain C3B42_RS05570 PF00684 DnaJ central domain C3B42_RS05570 PF00226 DnaJ domain C3B42_RS05570 PF01556 DnaJ C terminal domain C3B42_RS05595 PF00753 Metallo-beta-lactamase superfamily C3B42_RS05605 PF01590 GAF domain C3B42_RS05605 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS05605 PF00360 Phytochrome region C3B42_RS05605 PF00563 EAL domain C3B42_RS05610 PF08003 Protein of unknown function (DUF1698) C3B42_RS05615 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS05620 PF05140 ResB-like family C3B42_RS05620 PF01578 Cytochrome C assembly protein C3B42_RS05625 PF07687 Peptidase dimerisation domain C3B42_RS05625 PF01546 Peptidase family M20/M25/M40 C3B42_RS05630 PF07730 Histidine kinase C3B42_RS05630 PF17200 Single Cache domain 2 C3B42_RS05640 PF03548 Outer membrane lipoprotein carrier protein LolA C3B42_RS05645 PF02810 SEC-C motif C3B42_RS05645 PF07517 SecA DEAD-like domain C3B42_RS05645 PF01043 SecA preprotein cross-linking domain C3B42_RS05645 PF07516 SecA Wing and Scaffold domain C3B42_RS05645 PF00271 Helicase conserved C-terminal domain C3B42_RS05650 PF02687 FtsX-like permease family C3B42_RS05650 PF12704 MacB-like periplasmic core domain C3B42_RS05655 PF00994 Probable molybdopterin binding domain C3B42_RS05665 PF06480 FtsH Extracellular C3B42_RS05665 PF17862 AAA+ lid domain C3B42_RS05665 PF00004 ATPase family associated with various cellular activities (AAA) C3B42_RS05665 PF01434 Peptidase family M41 C3B42_RS05670 PF04055 Radical SAM superfamily C3B42_RS05670 PF00919 Uncharacterized protein family UPF0004 C3B42_RS05685 PF01761 3-dehydroquinate synthase C3B42_RS05705 PF01032 FecCD transport family C3B42_RS05710 PF00005 ABC transporter C3B42_RS05715 PF01497 Periplasmic binding protein C3B42_RS05720 PF00593 TonB dependent receptor C3B42_RS05720 PF07715 TonB-dependent Receptor Plug Domain C3B42_RS05745 PF01479 S4 domain C3B42_RS05745 PF00849 RNA pseudouridylate synthase C3B42_RS05750 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C3B42_RS05760 PF08534 Redoxin C3B42_RS05775 PF02600 Disulfide bond formation protein DsbB C3B42_RS05785 PF00999 Sodium/hydrogen exchanger family C3B42_RS05785 PF02254 TrkA-N domain C3B42_RS05810 PF00211 Adenylate and Guanylate cyclase catalytic domain C3B42_RS05815 PF01966 HD domain C3B42_RS05815 PF00072 Response regulator receiver domain C3B42_RS05820 PF00155 Aminotransferase class I and II C3B42_RS05825 PF01863 Protein of unknown function DUF45 C3B42_RS05835 PF00890 FAD binding domain C3B42_RS05835 PF02910 Fumarate reductase flavoprotein C-term C3B42_RS05840 PF00117 Glutamine amidotransferase class-I C3B42_RS05840 PF00958 GMP synthase C terminal domain C3B42_RS05840 PF02540 NAD synthase C3B42_RS05850 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C3B42_RS05865 PF00872 Transposase, Mutator family C3B42_RS05885 PF00561 alpha/beta hydrolase fold C3B42_RS05900 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS05900 PF10442 FIST C domain C3B42_RS05900 PF08495 FIST N domain C3B42_RS05900 PF00563 EAL domain C3B42_RS05905 PF00563 EAL domain C3B42_RS05905 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS05905 PF08448 PAS fold C3B42_RS05910 PF17760 UvrA interaction domain C3B42_RS05910 PF17755 UvrA DNA-binding domain C3B42_RS05910 PF00005 ABC transporter C3B42_RS05915 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3B42_RS05930 PF02384 N-6 DNA Methylase C3B42_RS05930 PF12161 HsdM N-terminal domain C3B42_RS05935 PF02661 Fic/DOC family C3B42_RS05935 PF13784 Fic/DOC family N-terminal C3B42_RS05950 PF08463 EcoEI R protein C-terminal C3B42_RS05950 PF00271 Helicase conserved C-terminal domain C3B42_RS05950 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) C3B42_RS05950 PF04851 Type III restriction enzyme, res subunit C3B42_RS05955 PF03441 FAD binding domain of DNA photolyase C3B42_RS05955 PF00875 DNA photolyase C3B42_RS05960 PF01370 NAD dependent epimerase/dehydratase family C3B42_RS05960 PF08338 Domain of unknown function (DUF1731) C3B42_RS05970 PF08212 Lipocalin-like domain C3B42_RS05975 PF00762 Ferrochelatase C3B42_RS05980 PF04244 Deoxyribodipyrimidine photo-lyase-related protein C3B42_RS05995 PF03109 ABC1 family C3B42_RS06005 PF12792 CSS motif domain associated with EAL C3B42_RS06005 PF00563 EAL domain C3B42_RS06015 PF06580 Histidine kinase C3B42_RS06015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS06015 PF07694 5TMR of 5TMR-LYT C3B42_RS06015 PF13492 GAF domain C3B42_RS06035 PF01699 Sodium/calcium exchanger protein C3B42_RS06040 PF01367 5'-3' exonuclease, C-terminal SAM fold C3B42_RS06040 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3B42_RS06040 PF00476 DNA polymerase family A C3B42_RS06045 PF18073 Rubredoxin metal binding domain C3B42_RS06055 PF02130 Uncharacterized protein family UPF0054 C3B42_RS06060 PF01475 Ferric uptake regulator family C3B42_RS06070 PF03023 Lipid II flippase MurJ C3B42_RS06075 PF00664 ABC transporter transmembrane region C3B42_RS06075 PF00005 ABC transporter C3B42_RS06080 PF01180 Dihydroorotate dehydrogenase C3B42_RS06085 PF00675 Insulinase (Peptidase family M16) C3B42_RS06085 PF05193 Peptidase M16 inactive domain C3B42_RS06090 PF00701 Dihydrodipicolinate synthetase family C3B42_RS06100 PF01066 CDP-alcohol phosphatidyltransferase C3B42_RS06105 PF17820 PDZ domain C3B42_RS06105 PF02163 Peptidase family M50 C3B42_RS06110 PF01168 Alanine racemase, N-terminal domain C3B42_RS06115 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS06115 PF00672 HAMP domain C3B42_RS06115 PF02203 Tar ligand binding domain homologue C3B42_RS06120 PF08447 PAS fold C3B42_RS06120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS06135 PF00072 Response regulator receiver domain C3B42_RS06135 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS06150 PF01709 Transcriptional regulator C3B42_RS06170 PF03641 Possible lysine decarboxylase C3B42_RS06175 PF13419 Haloacid dehalogenase-like hydrolase C3B42_RS06190 PF00872 Transposase, Mutator family C3B42_RS06200 PF08543 Phosphomethylpyrimidine kinase C3B42_RS06205 PF00171 Aldehyde dehydrogenase family C3B42_RS06220 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3B42_RS06225 PF00795 Carbon-nitrogen hydrolase C3B42_RS06250 PF00501 AMP-binding enzyme C3B42_RS06250 PF13193 AMP-binding enzyme C-terminal domain C3B42_RS06255 PF03062 MBOAT, membrane-bound O-acyltransferase family C3B42_RS06270 PF00550 Phosphopantetheine attachment site C3B42_RS06275 PF00132 Bacterial transferase hexapeptide (six repeats) C3B42_RS06295 PF00672 HAMP domain C3B42_RS06295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS06295 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS06295 PF13426 PAS domain C3B42_RS06325 PF05525 Branched-chain amino acid transport protein C3B42_RS06330 PF00588 SpoU rRNA Methylase family C3B42_RS06335 PF01842 ACT domain C3B42_RS06335 PF00551 Formyl transferase C3B42_RS06340 PF02578 Multi-copper polyphenol oxidoreductase laccase C3B42_RS06350 PF08501 Shikimate dehydrogenase substrate binding domain C3B42_RS06355 PF00196 Bacterial regulatory proteins, luxR family C3B42_RS06355 PF17874 MalT-like TPR region C3B42_RS06360 PF13533 Biotin-lipoyl like C3B42_RS06365 PF00664 ABC transporter transmembrane region C3B42_RS06365 PF00005 ABC transporter C3B42_RS06365 PF03412 Peptidase C39 family C3B42_RS06390 PF00271 Helicase conserved C-terminal domain C3B42_RS06390 PF00270 DEAD/DEAH box helicase C3B42_RS06400 PF03738 Glutathionylspermidine synthase preATP-grasp C3B42_RS06405 PF02203 Tar ligand binding domain homologue C3B42_RS06405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS06405 PF00672 HAMP domain C3B42_RS06410 PF00672 HAMP domain C3B42_RS06410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS06410 PF02203 Tar ligand binding domain homologue C3B42_RS06415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS06415 PF02203 Tar ligand binding domain homologue C3B42_RS06415 PF00672 HAMP domain C3B42_RS06420 PF00533 BRCA1 C Terminus (BRCT) domain C3B42_RS06420 PF01653 NAD-dependent DNA ligase adenylation domain C3B42_RS06420 PF03120 NAD-dependent DNA ligase OB-fold domain C3B42_RS06420 PF12826 Helix-hairpin-helix motif C3B42_RS06425 PF00872 Transposase, Mutator family C3B42_RS06430 PF00478 IMP dehydrogenase / GMP reductase domain C3B42_RS06430 PF00571 CBS domain C3B42_RS06435 PF01425 Amidase C3B42_RS06440 PF01196 Ribosomal protein L17 C3B42_RS06445 PF01000 RNA polymerase Rpb3/RpoA insert domain C3B42_RS06445 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C3B42_RS06445 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C3B42_RS06450 PF00163 Ribosomal protein S4/S9 N-terminal domain C3B42_RS06450 PF01479 S4 domain C3B42_RS06455 PF00411 Ribosomal protein S11 C3B42_RS06460 PF00416 Ribosomal protein S13/S18 C3B42_RS06465 PF00444 Ribosomal protein L36 C3B42_RS06480 PF00180 Isocitrate/isopropylmalate dehydrogenase C3B42_RS06485 PF00694 Aconitase C-terminal domain C3B42_RS06490 PF00140 Sigma-70 factor, region 1.2 C3B42_RS06490 PF04545 Sigma-70, region 4 C3B42_RS06490 PF04539 Sigma-70 region 3 C3B42_RS06490 PF04542 Sigma-70 region 2 C3B42_RS06495 PF02092 Glycyl-tRNA synthetase beta subunit C3B42_RS06515 PF02527 rRNA small subunit methyltransferase G C3B42_RS06520 PF00925 GTP cyclohydrolase II C3B42_RS06525 PF00490 Delta-aminolevulinic acid dehydratase C3B42_RS06555 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 C3B42_RS06560 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3B42_RS06560 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3B42_RS06560 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3B42_RS06560 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3B42_RS06565 PF00483 Nucleotidyl transferase C3B42_RS06570 PF00342 Phosphoglucose isomerase C3B42_RS06590 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C3B42_RS06600 PF02719 Polysaccharide biosynthesis protein C3B42_RS06605 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B42_RS06610 PF00132 Bacterial transferase hexapeptide (six repeats) C3B42_RS06610 PF17836 PglD N-terminal domain C3B42_RS06615 PF02397 Bacterial sugar transferase C3B42_RS06620 PF13477 Glycosyl transferase 4-like C3B42_RS06620 PF00534 Glycosyl transferases group 1 C3B42_RS06630 PF13439 Glycosyltransferase Family 4 C3B42_RS06630 PF00534 Glycosyl transferases group 1 C3B42_RS06635 PF00664 ABC transporter transmembrane region C3B42_RS06635 PF00005 ABC transporter C3B42_RS06650 PF00977 Histidine biosynthesis protein C3B42_RS06655 PF00117 Glutamine amidotransferase class-I C3B42_RS06665 PF02911 Formyl transferase, C-terminal domain C3B42_RS06665 PF00551 Formyl transferase C3B42_RS06670 PF00733 Asparagine synthase C3B42_RS06670 PF13537 Glutamine amidotransferase domain C3B42_RS06675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B42_RS06680 PF16363 GDP-mannose 4,6 dehydratase C3B42_RS06685 PF01266 FAD dependent oxidoreductase C3B42_RS06690 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3B42_RS06695 PF00132 Bacterial transferase hexapeptide (six repeats) C3B42_RS06700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3B42_RS06700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3B42_RS06705 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3B42_RS06705 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3B42_RS06705 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3B42_RS06710 PF01370 NAD dependent epimerase/dehydratase family C3B42_RS06730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3B42_RS06730 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3B42_RS06730 PF02142 MGS-like domain C3B42_RS06740 PF00561 alpha/beta hydrolase fold C3B42_RS06750 PF04143 Sulphur transport C3B42_RS06755 PF12327 FtsZ family, C-terminal domain C3B42_RS06755 PF00091 Tubulin/FtsZ family, GTPase domain C3B42_RS06760 PF02491 SHS2 domain inserted in FTSA C3B42_RS06770 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C3B42_RS06770 PF14490 Helix-hairpin-helix containing domain C3B42_RS06770 PF13538 UvrD-like helicase C-terminal domain C3B42_RS06780 PF00817 impB/mucB/samB family C3B42_RS06780 PF11799 impB/mucB/samB family C-terminal domain C3B42_RS06780 PF11798 IMS family HHH motif C3B42_RS06790 PF09242 Flavocytochrome c sulphide dehydrogenase, flavin-binding C3B42_RS06790 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B42_RS06790 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3B42_RS06795 PF12848 ABC transporter C3B42_RS06795 PF00005 ABC transporter C3B42_RS06795 PF16326 ABC transporter C-terminal domain C3B42_RS06800 PF04055 Radical SAM superfamily C3B42_RS06810 PF00456 Transketolase, thiamine diphosphate binding domain C3B42_RS06810 PF17831 Pyruvate dehydrogenase E1 component middle domain C3B42_RS06815 PF00364 Biotin-requiring enzyme C3B42_RS06815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3B42_RS06815 PF02817 e3 binding domain C3B42_RS06820 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3B42_RS06820 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B42_RS06830 PF00403 Heavy-metal-associated domain C3B42_RS06835 PF00271 Helicase conserved C-terminal domain C3B42_RS06835 PF00270 DEAD/DEAH box helicase C3B42_RS06850 PF00672 HAMP domain C3B42_RS06850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS06850 PF02203 Tar ligand binding domain homologue C3B42_RS06855 PF00075 RNase H C3B42_RS06860 PF00682 HMGL-like C3B42_RS06870 PF01312 FlhB HrpN YscU SpaS Family C3B42_RS06880 PF00583 Acetyltransferase (GNAT) family C3B42_RS06885 PF01926 50S ribosome-binding GTPase C3B42_RS06905 PF00475 Imidazoleglycerol-phosphate dehydratase C3B42_RS06910 PF03330 Lytic transglycolase C3B42_RS06910 PF05036 Sporulation related domain C3B42_RS06920 PF01026 TatD related DNase C3B42_RS06930 PF07724 AAA domain (Cdc48 subfamily) C3B42_RS06930 PF10431 C-terminal, D2-small domain, of ClpB protein C3B42_RS06935 PF00227 Proteasome subunit C3B42_RS06940 PF03948 Ribosomal protein L9, C-terminal domain C3B42_RS06940 PF01281 Ribosomal protein L9, N-terminal domain C3B42_RS06950 PF02441 Flavoprotein C3B42_RS06955 PF01467 Cytidylyltransferase-like C3B42_RS06960 PF02223 Thymidylate kinase C3B42_RS06965 PF13393 Histidyl-tRNA synthetase C3B42_RS06965 PF03129 Anticodon binding domain C3B42_RS06970 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3B42_RS06970 PF17810 Arginine decarboxylase helical bundle domain C3B42_RS06970 PF17944 Arginine decarboxylase C-terminal helical extension C3B42_RS06975 PF00132 Bacterial transferase hexapeptide (six repeats) C3B42_RS06975 PF06426 Serine acetyltransferase, N-terminal C3B42_RS06980 PF01925 Sulfite exporter TauE/SafE C3B42_RS06995 PF06865 Pyrimidine/purine nucleoside phosphorylase C3B42_RS07010 PF08668 HDOD domain C3B42_RS07015 PF06071 Protein of unknown function (DUF933) C3B42_RS07015 PF01926 50S ribosome-binding GTPase C3B42_RS07085 PF00872 Transposase, Mutator family C3B42_RS07165 PF13614 AAA domain C3B42_RS07180 PF01420 Type I restriction modification DNA specificity domain C3B42_RS07185 PF02384 N-6 DNA Methylase C3B42_RS07195 PF00239 Resolvase, N terminal domain C3B42_RS07195 PF02796 Helix-turn-helix domain of resolvase C3B42_RS07210 PF13676 TIR domain C3B42_RS07240 PF02796 Helix-turn-helix domain of resolvase C3B42_RS07240 PF00239 Resolvase, N terminal domain C3B42_RS07265 PF03062 MBOAT, membrane-bound O-acyltransferase family C3B42_RS07275 PF03601 Conserved hypothetical protein 698 C3B42_RS07280 PF03466 LysR substrate binding domain C3B42_RS07280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B42_RS07285 PF00891 O-methyltransferase domain C3B42_RS07295 PF00561 alpha/beta hydrolase fold C3B42_RS07295 PF08386 TAP-like protein C3B42_RS07310 PF00109 Beta-ketoacyl synthase, N-terminal domain C3B42_RS07310 PF02801 Beta-ketoacyl synthase, C-terminal domain C3B42_RS07315 PF01494 FAD binding domain C3B42_RS07320 PF00550 Phosphopantetheine attachment site C3B42_RS07340 PF00221 Aromatic amino acid lyase C3B42_RS07370 PF00005 ABC transporter C3B42_RS07385 PF02801 Beta-ketoacyl synthase, C-terminal domain C3B42_RS07385 PF00109 Beta-ketoacyl synthase, N-terminal domain C3B42_RS07405 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3B42_RS07405 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3B42_RS07420 PF04055 Radical SAM superfamily C3B42_RS07420 PF08497 Radical SAM N-terminal C3B42_RS07425 PF02938 GAD domain C3B42_RS07425 PF00152 tRNA synthetases class II (D, K and N) C3B42_RS07425 PF01336 OB-fold nucleic acid binding domain C3B42_RS07435 PF03167 Uracil DNA glycosylase superfamily C3B42_RS07440 PF01176 Translation initiation factor 1A / IF-1 C3B42_RS07445 PF00557 Metallopeptidase family M24 C3B42_RS07450 PF00344 SecY translocase C3B42_RS07455 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C3B42_RS07460 PF00333 Ribosomal protein S5, N-terminal domain C3B42_RS07460 PF03719 Ribosomal protein S5, C-terminal domain C3B42_RS07465 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C3B42_RS07470 PF00347 Ribosomal protein L6 C3B42_RS07475 PF00410 Ribosomal protein S8 C3B42_RS07480 PF00253 Ribosomal protein S14p/S29e C3B42_RS07485 PF00673 ribosomal L5P family C-terminus C3B42_RS07485 PF00281 Ribosomal protein L5 C3B42_RS07490 PF00467 KOW motif C3B42_RS07490 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C3B42_RS07495 PF00238 Ribosomal protein L14p/L23e C3B42_RS07500 PF00366 Ribosomal protein S17 C3B42_RS07505 PF00831 Ribosomal L29 protein C3B42_RS07510 PF00252 Ribosomal protein L16p/L10e C3B42_RS07515 PF00189 Ribosomal protein S3, C-terminal domain C3B42_RS07515 PF07650 KH domain C3B42_RS07520 PF00237 Ribosomal protein L22p/L17e C3B42_RS07525 PF00203 Ribosomal protein S19 C3B42_RS07530 PF00181 Ribosomal Proteins L2, RNA binding domain C3B42_RS07530 PF03947 Ribosomal Proteins L2, C-terminal domain C3B42_RS07535 PF00276 Ribosomal protein L23 C3B42_RS07540 PF00573 Ribosomal protein L4/L1 family C3B42_RS07545 PF00297 Ribosomal protein L3 C3B42_RS07550 PF00338 Ribosomal protein S10p/S20e C3B42_RS07570 PF03372 Endonuclease/Exonuclease/phosphatase family C3B42_RS07575 PF02926 THUMP domain C3B42_RS07575 PF02568 Thiamine biosynthesis protein (ThiI) C3B42_RS07595 PF13335 Magnesium chelatase, subunit ChlI C-terminal C3B42_RS07595 PF01078 Magnesium chelatase, subunit ChlI C3B42_RS07600 PF02203 Tar ligand binding domain homologue C3B42_RS07600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS07600 PF00672 HAMP domain C3B42_RS07605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS07605 PF08447 PAS fold C3B42_RS07615 PF01327 Polypeptide deformylase C3B42_RS07620 PF00574 Clp protease C3B42_RS07625 PF05698 Bacterial trigger factor protein (TF) C-terminus C3B42_RS07625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3B42_RS07625 PF05697 Bacterial trigger factor protein (TF) C3B42_RS07630 PF03976 Polyphosphate kinase 2 (PPK2) C3B42_RS07635 PF03976 Polyphosphate kinase 2 (PPK2) C3B42_RS07640 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3B42_RS07645 PF16653 Saccharopine dehydrogenase C-terminal domain C3B42_RS07645 PF03435 Saccharopine dehydrogenase NADP binding domain C3B42_RS07655 PF02698 DUF218 domain C3B42_RS07660 PF01875 Memo-like protein C3B42_RS07675 PF00034 Cytochrome c C3B42_RS07680 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3B42_RS07690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3B42_RS07695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3B42_RS07710 PF04055 Radical SAM superfamily C3B42_RS07710 PF13186 Iron-sulfur cluster-binding domain C3B42_RS07720 PF10414 Sirohaem synthase dimerisation region C3B42_RS07720 PF14824 Sirohaem biosynthesis protein central C3B42_RS07720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3B42_RS07730 PF10414 Sirohaem synthase dimerisation region C3B42_RS07730 PF14824 Sirohaem biosynthesis protein central C3B42_RS07730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3B42_RS07735 PF17805 AsnC-like ligand binding domain C3B42_RS07750 PF00762 Ferrochelatase C3B42_RS07755 PF00005 ABC transporter C3B42_RS07760 PF00313 'Cold-shock' DNA-binding domain C3B42_RS07775 PF00403 Heavy-metal-associated domain C3B42_RS07785 PF00625 Guanylate kinase C3B42_RS07795 PF00005 ABC transporter C3B42_RS07800 PF00889 Elongation factor TS C3B42_RS07805 PF00318 Ribosomal protein S2 C3B42_RS07810 PF08245 Mur ligase middle domain C3B42_RS07810 PF02875 Mur ligase family, glutamate ligase domain C3B42_RS07825 PF00133 tRNA synthetases class I (I, L, M and V) C3B42_RS07825 PF08264 Anticodon-binding domain of tRNA C3B42_RS07830 PF06039 Malate:quinone oxidoreductase (Mqo) C3B42_RS07835 PF00994 Probable molybdopterin binding domain C3B42_RS07835 PF18146 Damage-inducible protein CinA KH domain C3B42_RS07835 PF02464 Competence-damaged protein C3B42_RS07880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS07880 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS07885 PF00072 Response regulator receiver domain C3B42_RS07885 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS07895 PF00474 Sodium:solute symporter family C3B42_RS07905 PF00929 Exonuclease C3B42_RS07905 PF11490 DNA polymerase III polC-type N-terminus II C3B42_RS07905 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3B42_RS07905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3B42_RS07905 PF14579 Helix-hairpin-helix motif C3B42_RS07905 PF02811 PHP domain C3B42_RS07915 PF00474 Sodium:solute symporter family C3B42_RS07925 PF00474 Sodium:solute symporter family C3B42_RS07945 PF00871 Acetokinase family C3B42_RS07950 PF01515 Phosphate acetyl/butaryl transferase C3B42_RS07955 PF00871 Acetokinase family C3B42_RS07960 PF01343 Peptidase family S49 C3B42_RS07965 PF01979 Amidohydrolase family C3B42_RS07970 PF01220 Dehydroquinase class II C3B42_RS07975 PF00557 Metallopeptidase family M24 C3B42_RS07975 PF01321 Creatinase/Prolidase N-terminal domain C3B42_RS07980 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C3B42_RS08000 PF14572 Phosphoribosyl synthetase-associated domain C3B42_RS08000 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C3B42_RS08005 PF00691 OmpA family C3B42_RS08005 PF05736 OprF membrane domain C3B42_RS08010 PF06421 GTP-binding protein LepA C-terminus C3B42_RS08010 PF03144 Elongation factor Tu domain 2 C3B42_RS08010 PF00009 Elongation factor Tu GTP binding domain C3B42_RS08010 PF00679 Elongation factor G C-terminus C3B42_RS08025 PF00872 Transposase, Mutator family C3B42_RS08040 PF00117 Glutamine amidotransferase class-I C3B42_RS08045 PF00977 Histidine biosynthesis protein C3B42_RS08050 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS08050 PF00072 Response regulator receiver domain C3B42_RS08065 PF05192 MutS domain III C3B42_RS08065 PF00488 MutS domain V C3B42_RS08065 PF01624 MutS domain I C3B42_RS08065 PF05188 MutS domain II C3B42_RS08065 PF05190 MutS family domain IV C3B42_RS08080 PF00682 HMGL-like C3B42_RS08080 PF08502 LeuA allosteric (dimerisation) domain C3B42_RS08085 PF17862 AAA+ lid domain C3B42_RS08085 PF00004 ATPase family associated with various cellular activities (AAA) C3B42_RS08085 PF01434 Peptidase family M41 C3B42_RS08095 PF01207 Dihydrouridine synthase (Dus) C3B42_RS08105 PF02590 Predicted SPOUT methyltransferase C3B42_RS08110 PF02581 Thiamine monophosphate synthase C3B42_RS08115 PF01039 Carboxyl transferase domain C3B42_RS08115 PF17848 Acetyl-coA carboxylase zinc finger domain C3B42_RS08120 PF02773 S-adenosylmethionine synthetase, C-terminal domain C3B42_RS08120 PF02772 S-adenosylmethionine synthetase, central domain C3B42_RS08120 PF00438 S-adenosylmethionine synthetase, N-terminal domain C3B42_RS08125 PF01380 SIS domain C3B42_RS08130 PF00459 Inositol monophosphatase family C3B42_RS08140 PF02203 Tar ligand binding domain homologue C3B42_RS08140 PF00672 HAMP domain C3B42_RS08140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS08180 PF00883 Cytosol aminopeptidase family, catalytic domain C3B42_RS08180 PF02789 Cytosol aminopeptidase family, N-terminal domain C3B42_RS08190 PF00291 Pyridoxal-phosphate dependent enzyme C3B42_RS08195 PF00156 Phosphoribosyl transferase domain C3B42_RS08200 PF01068 ATP dependent DNA ligase domain C3B42_RS08200 PF14743 DNA ligase OB-like domain C3B42_RS08210 PF01053 Cys/Met metabolism PLP-dependent enzyme C3B42_RS08215 PF01053 Cys/Met metabolism PLP-dependent enzyme C3B42_RS08230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3B42_RS08240 PF00072 Response regulator receiver domain C3B42_RS08240 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS08280 PF03824 High-affinity nickel-transport protein C3B42_RS08295 PF06965 Na+/H+ antiporter 1 C3B42_RS08335 PF00696 Amino acid kinase family C3B42_RS08340 PF01192 RNA polymerase Rpb6 C3B42_RS08345 PF02824 TGS domain C3B42_RS08345 PF13291 ACT domain C3B42_RS08345 PF04607 Region found in RelA / SpoT proteins C3B42_RS08350 PF01479 S4 domain C3B42_RS08350 PF00579 tRNA synthetases class I (W and Y) C3B42_RS08360 PF01520 N-acetylmuramoyl-L-alanine amidase C3B42_RS08375 PF01195 Peptidyl-tRNA hydrolase C3B42_RS08380 PF14693 Ribosomal protein TL5, C-terminal domain C3B42_RS08380 PF01386 Ribosomal L25p family C3B42_RS08385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C3B42_RS08385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C3B42_RS08390 PF10502 Signal peptidase, peptidase S26 C3B42_RS08395 PF02502 Ribose/Galactose Isomerase C3B42_RS08435 PF00563 EAL domain C3B42_RS08435 PF08495 FIST N domain C3B42_RS08435 PF10442 FIST C domain C3B42_RS08435 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS08440 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region C3B42_RS08440 PF01243 Pyridoxamine 5'-phosphate oxidase C3B42_RS08445 PF16916 Dimerisation domain of Zinc Transporter C3B42_RS08445 PF01545 Cation efflux family C3B42_RS08450 PF00872 Transposase, Mutator family C3B42_RS08455 PF03707 Bacterial signalling protein N terminal repeat C3B42_RS08455 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS08455 PF00563 EAL domain C3B42_RS08460 PF00271 Helicase conserved C-terminal domain C3B42_RS08460 PF00270 DEAD/DEAH box helicase C3B42_RS08460 PF03880 DbpA RNA binding domain C3B42_RS08480 PF00183 Hsp90 protein C3B42_RS08485 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS08485 PF00360 Phytochrome region C3B42_RS08485 PF01590 GAF domain C3B42_RS08485 PF00563 EAL domain C3B42_RS08490 PF00672 HAMP domain C3B42_RS08490 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) C3B42_RS08490 PF00072 Response regulator receiver domain C3B42_RS08490 PF01627 Hpt domain C3B42_RS08490 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS08490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS08500 PF00491 Arginase family C3B42_RS08505 PF00005 ABC transporter C3B42_RS08510 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS08515 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS08520 PF12849 PBP superfamily domain C3B42_RS08530 PF08713 DNA alkylation repair enzyme C3B42_RS08535 PF04073 Aminoacyl-tRNA editing domain C3B42_RS08570 PF04403 Paraquat-inducible protein A C3B42_RS08575 PF02470 MlaD protein C3B42_RS08580 PF06628 Catalase-related immune-responsive C3B42_RS08580 PF00199 Catalase C3B42_RS08585 PF12796 Ankyrin repeats (3 copies) C3B42_RS08585 PF00023 Ankyrin repeat C3B42_RS08595 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3B42_RS08595 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3B42_RS08600 PF08502 LeuA allosteric (dimerisation) domain C3B42_RS08600 PF00682 HMGL-like C3B42_RS08605 PF12833 Helix-turn-helix domain C3B42_RS08605 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term C3B42_RS08610 PF00924 Mechanosensitive ion channel C3B42_RS08615 PF01368 DHH family C3B42_RS08615 PF02833 DHHA2 domain C3B42_RS08620 PF02810 SEC-C motif C3B42_RS08640 PF10415 Fumarase C C-terminus C3B42_RS08640 PF00206 Lyase C3B42_RS08645 PF01048 Phosphorylase superfamily C3B42_RS08650 PF00698 Acyl transferase domain C3B42_RS08655 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3B42_RS08670 PF04052 TolB amino-terminal domain C3B42_RS08680 PF02472 Biopolymer transport protein ExbD/TolR C3B42_RS08685 PF01618 MotA/TolQ/ExbB proton channel family C3B42_RS08690 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C3B42_RS08695 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3B42_RS08695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B42_RS08700 PF00231 ATP synthase C3B42_RS08705 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B42_RS08705 PF00306 ATP synthase alpha/beta chain, C terminal domain C3B42_RS08705 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3B42_RS08710 PF00213 ATP synthase delta (OSCP) subunit C3B42_RS08715 PF00430 ATP synthase B/B' CF(0) C3B42_RS08725 PF17762 HTH domain found in ParB protein C3B42_RS08725 PF02195 ParB-like nuclease domain C3B42_RS08730 PF13614 AAA domain C3B42_RS08745 PF08447 PAS fold C3B42_RS08745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS08750 PF00551 Formyl transferase C3B42_RS08750 PF02911 Formyl transferase, C-terminal domain C3B42_RS08755 PF00696 Amino acid kinase family C3B42_RS08760 PF01018 GTP1/OBG C3B42_RS08760 PF01926 50S ribosome-binding GTPase C3B42_RS08765 PF01016 Ribosomal L27 protein C3B42_RS08770 PF00829 Ribosomal prokaryotic L21 protein C3B42_RS08790 PF16730 DnaG-primase C-terminal, helicase-binding domain C3B42_RS08790 PF13662 Toprim domain C3B42_RS08790 PF01807 CHC2 zinc finger C3B42_RS08790 PF08275 DNA primase catalytic core, N-terminal domain C3B42_RS08800 PF14622 Ribonuclease-III-like C3B42_RS08800 PF00035 Double-stranded RNA binding motif C3B42_RS08805 PF01264 Chorismate synthase C3B42_RS08815 PF03976 Polyphosphate kinase 2 (PPK2) C3B42_RS08830 PF01625 Peptide methionine sulfoxide reductase C3B42_RS08840 PF00202 Aminotransferase class-III C3B42_RS08850 PF01808 AICARFT/IMPCHase bienzyme C3B42_RS08850 PF02142 MGS-like domain C3B42_RS08855 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C3B42_RS08855 PF00586 AIR synthase related protein, N-terminal domain C3B42_RS08855 PF02769 AIR synthase related protein, C-terminal domain C3B42_RS08865 PF01551 Peptidase family M23 C3B42_RS08865 PF10145 Phage-related minor tail protein C3B42_RS08865 PF01464 Transglycosylase SLT domain C3B42_RS08870 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3B42_RS08870 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3B42_RS08885 PF00575 S1 RNA binding domain C3B42_RS08885 PF16921 Tex protein YqgF-like domain C3B42_RS08885 PF09371 Tex-like protein N-terminal domain C3B42_RS08885 PF17674 HHH domain C3B42_RS08890 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C3B42_RS08895 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C3B42_RS08900 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C3B42_RS08905 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C3B42_RS08905 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C3B42_RS08915 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3B42_RS08915 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C3B42_RS08915 PF10531 SLBB domain C3B42_RS08920 PF00285 Citrate synthase, C-terminal domain C3B42_RS08925 PF00384 Molybdopterin oxidoreductase C3B42_RS08925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3B42_RS08925 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal C3B42_RS08930 PF00146 NADH dehydrogenase C3B42_RS08935 PF12838 4Fe-4S dicluster domain C3B42_RS08940 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C3B42_RS08945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C3B42_RS08950 PF00361 Proton-conducting membrane transporter C3B42_RS08950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C3B42_RS08955 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus C3B42_RS08955 PF00361 Proton-conducting membrane transporter C3B42_RS08960 PF00361 Proton-conducting membrane transporter C3B42_RS08965 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C3B42_RS08970 PF00890 FAD binding domain C3B42_RS08970 PF02910 Fumarate reductase flavoprotein C-term C3B42_RS08975 PF13085 2Fe-2S iron-sulfur cluster binding domain C3B42_RS08975 PF13183 4Fe-4S dicluster domain C3B42_RS08980 PF00350 Dynamin family C3B42_RS08985 PF00350 Dynamin family C3B42_RS08995 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3B42_RS08995 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3B42_RS09000 PF02504 Fatty acid synthesis protein C3B42_RS09005 PF01783 Ribosomal L32p protein family C3B42_RS09015 PF00334 Nucleoside diphosphate kinase C3B42_RS09025 PF10417 C-terminal domain of 1-Cys peroxiredoxin C3B42_RS09025 PF00578 AhpC/TSA family C3B42_RS09030 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3B42_RS09030 PF07498 Rho termination factor, N-terminal domain C3B42_RS09030 PF07497 Rho termination factor, RNA-binding domain C3B42_RS09035 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3B42_RS09035 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3B42_RS09040 PF01177 Asp/Glu/Hydantoin racemase C3B42_RS09045 PF12170 DNA polymerase III tau subunit V interacting with alpha C3B42_RS09045 PF12169 DNA polymerase III subunits gamma and tau domain III C3B42_RS09055 PF03900 Porphobilinogen deaminase, C-terminal domain C3B42_RS09055 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C3B42_RS09060 PF00857 Isochorismatase family C3B42_RS09085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C3B42_RS09085 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP C3B42_RS09100 PF00115 Cytochrome C and Quinol oxidase polypeptide I C3B42_RS09105 PF01668 SmpB protein C3B42_RS09110 PF00288 GHMP kinases N terminal domain C3B42_RS09115 PF01509 TruB family pseudouridylate synthase (N terminal domain) C3B42_RS09120 PF00580 UvrD/REP helicase N-terminal domain C3B42_RS09120 PF13361 UvrD-like helicase C-terminal domain C3B42_RS09125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3B42_RS09125 PF03466 LysR substrate binding domain C3B42_RS09130 PF04055 Radical SAM superfamily C3B42_RS09130 PF16199 Radical_SAM C-terminal domain C3B42_RS09135 PF13537 Glutamine amidotransferase domain C3B42_RS09135 PF00156 Phosphoribosyl transferase domain C3B42_RS09140 PF01113 Dihydrodipicolinate reductase, N-terminus C3B42_RS09140 PF05173 Dihydrodipicolinate reductase, C-terminus C3B42_RS09145 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B42_RS09150 PF00085 Thioredoxin C3B42_RS09155 PF01411 tRNA synthetases class II (A) C3B42_RS09155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3B42_RS09155 PF02272 DHHA1 domain C3B42_RS09185 PF00072 Response regulator receiver domain C3B42_RS09185 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS09190 PF13180 PDZ domain C3B42_RS09190 PF17820 PDZ domain C3B42_RS09195 PF00920 Dehydratase family C3B42_RS09225 PF00005 ABC transporter C3B42_RS09225 PF09383 NIL domain C3B42_RS09245 PF01142 tRNA pseudouridine synthase D (TruD) C3B42_RS09260 PF13180 PDZ domain C3B42_RS09260 PF03572 Peptidase family S41 C3B42_RS09265 PF01259 SAICAR synthetase C3B42_RS09270 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase C3B42_RS09285 PF01553 Acyltransferase C3B42_RS09290 PF02537 CrcB-like protein, Camphor Resistance (CrcB) C3B42_RS09295 PF02416 mttA/Hcf106 family C3B42_RS09300 PF02416 mttA/Hcf106 family C3B42_RS09305 PF00750 tRNA synthetases class I (R) C3B42_RS09305 PF05746 DALR anticodon binding domain C3B42_RS09305 PF03485 Arginyl tRNA synthetase N terminal domain C3B42_RS09315 PF01467 Cytidylyltransferase-like C3B42_RS09320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3B42_RS09320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3B42_RS09325 PF00162 Phosphoglycerate kinase C3B42_RS09330 PF00121 Triosephosphate isomerase C3B42_RS09340 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3B42_RS09340 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3B42_RS09345 PF01817 Chorismate mutase type II C3B42_RS09345 PF00800 Prephenate dehydratase C3B42_RS09345 PF01842 ACT domain C3B42_RS09350 PF00155 Aminotransferase class I and II C3B42_RS09355 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C3B42_RS09355 PF02779 Transketolase, pyrimidine binding domain C3B42_RS09355 PF02780 Transketolase, C-terminal domain C3B42_RS09360 PF03150 Di-haem cytochrome c peroxidase C3B42_RS09360 PF00034 Cytochrome c C3B42_RS09370 PF02545 Maf-like protein C3B42_RS09380 PF00877 NlpC/P60 family C3B42_RS09390 PF00939 Sodium:sulfate symporter transmembrane region C3B42_RS09400 PF02683 Cytochrome C biogenesis protein transmembrane region C3B42_RS09400 PF00085 Thioredoxin C3B42_RS09400 PF11412 Disulphide bond corrector protein DsbC C3B42_RS09405 PF00085 Thioredoxin C3B42_RS09410 PF08443 RimK-like ATP-grasp domain C3B42_RS09410 PF18030 RimK PreATP-grasp domain C3B42_RS09425 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS09425 PF00563 EAL domain C3B42_RS09425 PF08495 FIST N domain C3B42_RS09425 PF10442 FIST C domain C3B42_RS09430 PF02666 Phosphatidylserine decarboxylase C3B42_RS09440 PF04055 Radical SAM superfamily C3B42_RS09450 PF00484 Carbonic anhydrase C3B42_RS09455 PF00155 Aminotransferase class I and II C3B42_RS09460 PF02021 Uncharacterised protein family UPF0102 C3B42_RS09470 PF02887 Pyruvate kinase, alpha/beta domain C3B42_RS09470 PF00391 PEP-utilising enzyme, mobile domain C3B42_RS09470 PF00224 Pyruvate kinase, barrel domain C3B42_RS09480 PF13426 PAS domain C3B42_RS09480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS09480 PF00672 HAMP domain C3B42_RS09480 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS09485 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS09485 PF00072 Response regulator receiver domain C3B42_RS09495 PF02561 Flagellar protein FliS C3B42_RS09510 PF02107 Flagellar L-ring protein C3B42_RS09535 PF01313 Bacterial export proteins, family 3 C3B42_RS09545 PF02119 Flagellar P-ring protein C3B42_RS09550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3B42_RS09550 PF02154 Flagellar motor switch protein FliM C3B42_RS09560 PF00543 Nitrogen regulatory protein P-II C3B42_RS09565 PF00909 Ammonium Transporter Family C3B42_RS09570 PF12796 Ankyrin repeats (3 copies) C3B42_RS09570 PF13606 Ankyrin repeat C3B42_RS09575 PF08335 GlnD PII-uridylyltransferase C3B42_RS09575 PF01966 HD domain C3B42_RS09585 PF02040 Arsenical pump membrane protein C3B42_RS09600 PF02694 Uncharacterised BCR, YnfA/UPF0060 family C3B42_RS09610 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3B42_RS09620 PF02779 Transketolase, pyrimidine binding domain C3B42_RS09620 PF00456 Transketolase, thiamine diphosphate binding domain C3B42_RS09620 PF02780 Transketolase, C-terminal domain C3B42_RS09630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS09630 PF08447 PAS fold C3B42_RS09630 PF08448 PAS fold C3B42_RS09635 PF00672 HAMP domain C3B42_RS09635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS09635 PF02203 Tar ligand binding domain homologue C3B42_RS09640 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C3B42_RS09655 PF02436 Conserved carboxylase domain C3B42_RS09655 PF00682 HMGL-like C3B42_RS09685 PF05690 Thiazole biosynthesis protein ThiG C3B42_RS09690 PF03091 CutA1 divalent ion tolerance protein C3B42_RS09695 PF03853 YjeF-related protein N-terminus C3B42_RS09695 PF01256 Carbohydrate kinase C3B42_RS09705 PF00814 Glycoprotease family C3B42_RS09720 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C3B42_RS09720 PF13288 DXP reductoisomerase C-terminal domain C3B42_RS09720 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C3B42_RS09750 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3B42_RS09750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3B42_RS09750 PF03129 Anticodon binding domain C3B42_RS09755 PF05198 Translation initiation factor IF-3, N-terminal domain C3B42_RS09755 PF00707 Translation initiation factor IF-3, C-terminal domain C3B42_RS09760 PF01632 Ribosomal protein L35 C3B42_RS09765 PF00453 Ribosomal protein L20 C3B42_RS09775 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B42_RS09780 PF12804 MobA-like NTP transferase domain C3B42_RS09785 PF00330 Aconitase family (aconitate hydratase) C3B42_RS09790 PF03960 ArsC family C3B42_RS09795 PF04303 PrpF protein C3B42_RS09800 PF00694 Aconitase C-terminal domain C3B42_RS09800 PF00330 Aconitase family (aconitate hydratase) C3B42_RS09805 PF00285 Citrate synthase, C-terminal domain C3B42_RS09820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3B42_RS09820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3B42_RS09825 PF01474 Class-II DAHP synthetase family C3B42_RS09830 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3B42_RS09845 PF03652 Holliday junction resolvase C3B42_RS09850 PF03616 Sodium/glutamate symporter C3B42_RS09865 PF01648 4'-phosphopantetheinyl transferase superfamily C3B42_RS09870 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS09875 PF02569 Pantoate-beta-alanine ligase C3B42_RS09880 PF01022 Bacterial regulatory protein, arsR family C3B42_RS09900 PF04055 Radical SAM superfamily C3B42_RS09900 PF18693 TRAM domain C3B42_RS09900 PF00919 Uncharacterized protein family UPF0004 C3B42_RS09905 PF01171 PP-loop family C3B42_RS09940 PF03831 PhnA domain C3B42_RS09940 PF08274 PhnA Zinc-Ribbon C3B42_RS09945 PF12849 PBP superfamily domain C3B42_RS09950 PF00990 Diguanylate cyclase, GGDEF domain C3B42_RS09950 PF03707 Bacterial signalling protein N terminal repeat C3B42_RS09950 PF00563 EAL domain C3B42_RS09955 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS09960 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS09965 PF00005 ABC transporter C3B42_RS09970 PF01895 PhoU domain C3B42_RS09980 PF00072 Response regulator receiver domain C3B42_RS09980 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS09985 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS09985 PF00989 PAS fold C3B42_RS09985 PF16736 Single Cache-like C3B42_RS09990 PF00572 Ribosomal protein L13 C3B42_RS09995 PF00380 Ribosomal protein S9/S16 C3B42_RS10000 PF03070 TENA/THI-4/PQQC family C3B42_RS10005 PF02110 Hydroxyethylthiazole kinase family C3B42_RS10010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3B42_RS10015 PF13419 Haloacid dehalogenase-like hydrolase C3B42_RS10035 PF00005 ABC transporter C3B42_RS10035 PF09383 NIL domain C3B42_RS10040 PF02405 Permease MlaE C3B42_RS10055 PF02664 S-Ribosylhomocysteinase (LuxS) C3B42_RS10060 PF05430 S-adenosyl-L-methionine-dependent methyltransferase C3B42_RS10060 PF01266 FAD dependent oxidoreductase C3B42_RS10065 PF07943 Penicillin-binding protein 5, C-terminal domain C3B42_RS10065 PF00768 D-alanyl-D-alanine carboxypeptidase C3B42_RS10075 PF13426 PAS domain C3B42_RS10075 PF13188 PAS domain C3B42_RS10075 PF00989 PAS fold C3B42_RS10075 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS10075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS10115 PF02965 Vitamin B12 dependent methionine synthase, activation domain C3B42_RS10115 PF00809 Pterin binding enzyme C3B42_RS10115 PF02574 Homocysteine S-methyltransferase C3B42_RS10115 PF02310 B12 binding domain C3B42_RS10115 PF02607 B12 binding domain C3B42_RS10125 PF01063 Amino-transferase class IV C3B42_RS10140 PF01502 Phosphoribosyl-AMP cyclohydrolase C3B42_RS10140 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C3B42_RS10155 PF00583 Acetyltransferase (GNAT) family C3B42_RS10160 PF00202 Aminotransferase class-III C3B42_RS10165 PF06339 Ectoine synthase C3B42_RS10170 PF01883 Iron-sulfur cluster assembly protein C3B42_RS10170 PF10609 NUBPL iron-transfer P-loop NTPase C3B42_RS10175 PF01964 Radical SAM ThiC family C3B42_RS10185 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3B42_RS10185 PF02542 YgbB family C3B42_RS10195 PF04608 Phosphatidylglycerophosphatase A C3B42_RS10200 PF03462 PCRF domain C3B42_RS10200 PF00472 RF-1 domain C3B42_RS10205 PF01649 Ribosomal protein S20 C3B42_RS10210 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3B42_RS10210 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3B42_RS10210 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3B42_RS10210 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3B42_RS10215 PF01252 Signal peptidase (SPase) II C3B42_RS10220 PF00202 Aminotransferase class-III C3B42_RS10230 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3B42_RS10230 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3B42_RS10235 PF00425 chorismate binding enzyme C3B42_RS10240 PF01063 Amino-transferase class IV C3B42_RS10245 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C3B42_RS10245 PF00117 Glutamine amidotransferase class-I C3B42_RS10255 PF00709 Adenylosuccinate synthetase C3B42_RS10260 PF13393 Histidyl-tRNA synthetase C3B42_RS10265 PF00266 Aminotransferase class-V C3B42_RS10290 PF02678 Pirin C3B42_RS10290 PF17954 Quercetinase C-terminal cupin domain C3B42_RS10295 PF09962 Uncharacterized conserved protein (DUF2196) C3B42_RS10300 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3B42_RS10300 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3B42_RS10310 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3B42_RS10315 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS10315 PF00072 Response regulator receiver domain C3B42_RS10320 PF00989 PAS fold C3B42_RS10320 PF00512 His Kinase A (phospho-acceptor) domain C3B42_RS10320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS10325 PF02769 AIR synthase related protein, C-terminal domain C3B42_RS10325 PF00586 AIR synthase related protein, N-terminal domain C3B42_RS10330 PF17284 Spermidine synthase tetramerisation domain C3B42_RS10335 PF01121 Dephospho-CoA kinase C3B42_RS10345 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase C3B42_RS10345 PF12801 4Fe-4S binding domain C3B42_RS10345 PF13746 4Fe-4S dicluster domain C3B42_RS10350 PF00117 Glutamine amidotransferase class-I C3B42_RS10350 PF06418 CTP synthase N-terminus C3B42_RS10355 PF10141 Single-strand DNA-specific exonuclease, C terminal domain C3B42_RS10355 PF17768 RecJ OB domain C3B42_RS10355 PF02272 DHHA1 domain C3B42_RS10355 PF01368 DHH family C3B42_RS10370 PF01965 DJ-1/PfpI family C3B42_RS10375 PF02811 PHP domain C3B42_RS10375 PF14579 Helix-hairpin-helix motif C3B42_RS10375 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3B42_RS10375 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3B42_RS10380 PF01975 Survival protein SurE C3B42_RS10395 PF01967 MoaC family C3B42_RS10400 PF01165 Ribosomal protein S21 C3B42_RS10405 PF02535 ZIP Zinc transporter C3B42_RS10410 PF02661 Fic/DOC family C3B42_RS10455 PF07669 Eco57I restriction-modification methylase C3B42_RS10465 PF01040 UbiA prenyltransferase family C3B42_RS10480 PF01197 Ribosomal protein L31 C3B42_RS10485 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3B42_RS10490 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3B42_RS10490 PF00588 SpoU rRNA Methylase family C3B42_RS10500 PF00155 Aminotransferase class I and II C3B42_RS10505 PF03447 Homoserine dehydrogenase, NAD binding domain C3B42_RS10505 PF00742 Homoserine dehydrogenase C3B42_RS10505 PF01842 ACT domain C3B42_RS10510 PF00849 RNA pseudouridylate synthase C3B42_RS10515 PF00206 Lyase C3B42_RS10515 PF10397 Adenylosuccinate lyase C-terminus C3B42_RS10520 PF03477 ATP cone domain C3B42_RS10520 PF00317 Ribonucleotide reductase, all-alpha domain C3B42_RS10520 PF02867 Ribonucleotide reductase, barrel domain C3B42_RS10525 PF00268 Ribonucleotide reductase, small chain C3B42_RS10530 PF05736 OprF membrane domain C3B42_RS10530 PF00691 OmpA family C3B42_RS10540 PF00593 TonB dependent receptor C3B42_RS10540 PF07715 TonB-dependent Receptor Plug Domain C3B42_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS10550 PF08447 PAS fold C3B42_RS10550 PF08448 PAS fold C3B42_RS10555 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS10555 PF00072 Response regulator receiver domain C3B42_RS10575 PF00107 Zinc-binding dehydrogenase C3B42_RS10575 PF08240 Alcohol dehydrogenase GroES-like domain C3B42_RS10580 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C3B42_RS10580 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C3B42_RS10585 PF02637 GatB domain C3B42_RS10585 PF02934 GatB/GatE catalytic domain C3B42_RS10595 PF01872 RibD C-terminal domain C3B42_RS10595 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3B42_RS10600 PF00364 Biotin-requiring enzyme C3B42_RS10605 PF02785 Biotin carboxylase C-terminal domain C3B42_RS10605 PF00289 Biotin carboxylase, N-terminal domain C3B42_RS10605 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3B42_RS10610 PF00270 DEAD/DEAH box helicase C3B42_RS10610 PF00271 Helicase conserved C-terminal domain C3B42_RS10615 PF00313 'Cold-shock' DNA-binding domain C3B42_RS10630 PF01384 Phosphate transporter family C3B42_RS10640 PF00733 Asparagine synthase C3B42_RS10640 PF13537 Glutamine amidotransferase domain C3B42_RS10660 PF02562 PhoH-like protein C3B42_RS10660 PF13638 PIN domain C3B42_RS10665 PF03653 Uncharacterised protein family (UPF0093) C3B42_RS10670 PF16193 AAA C-terminal domain C3B42_RS10670 PF01661 Macro domain C3B42_RS10670 PF12002 MgsA AAA+ ATPase C terminal C3B42_RS10670 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3B42_RS10675 PF01479 S4 domain C3B42_RS10675 PF00849 RNA pseudouridylate synthase C3B42_RS10680 PF01380 SIS domain C3B42_RS10680 PF00571 CBS domain C3B42_RS10685 PF17770 Ribonuclease J C-terminal domain C3B42_RS10685 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C3B42_RS10685 PF00753 Metallo-beta-lactamase superfamily C3B42_RS10690 PF00398 Ribosomal RNA adenine dimethylase C3B42_RS10695 PF00977 Histidine biosynthesis protein C3B42_RS10710 PF04055 Radical SAM superfamily C3B42_RS10715 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3B42_RS10720 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) C3B42_RS10725 PF00072 Response regulator receiver domain C3B42_RS10725 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS10730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3B42_RS10750 PF00873 AcrB/AcrD/AcrF family C3B42_RS10755 PF04264 YceI-like domain C3B42_RS10760 PF00291 Pyridoxal-phosphate dependent enzyme C3B42_RS10775 PF00149 Calcineurin-like phosphoesterase C3B42_RS10780 PF00011 Hsp20/alpha crystallin family C3B42_RS10790 PF12857 TOBE-like domain C3B42_RS10790 PF00005 ABC transporter C3B42_RS10790 PF17850 CysA C-terminal regulatory domain C3B42_RS10795 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS10800 PF00528 Binding-protein-dependent transport system inner membrane component C3B42_RS10805 PF02203 Tar ligand binding domain homologue C3B42_RS10805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3B42_RS10805 PF00672 HAMP domain C3B42_RS10815 PF00581 Rhodanese-like domain C3B42_RS10815 PF00899 ThiF family C3B42_RS10830 PF02082 Transcriptional regulator C3B42_RS10835 PF03144 Elongation factor Tu domain 2 C3B42_RS10835 PF00009 Elongation factor Tu GTP binding domain C3B42_RS10835 PF00679 Elongation factor G C-terminus C3B42_RS10840 PF04143 Sulphur transport C3B42_RS10845 PF01206 Sulfurtransferase TusA C3B42_RS10850 PF00884 Sulfatase C3B42_RS10850 PF08019 Phosphoethanolamine transferase EptA/EptB C3B42_RS10860 PF01219 Prokaryotic diacylglycerol kinase C3B42_RS10890 PF00486 Transcriptional regulatory protein, C terminal C3B42_RS10890 PF00072 Response regulator receiver domain C3B42_RS10900 PF02511 Thymidylate synthase complementing protein C3B42_RS10905 PF03458 UPF0126 domain C3B42_RS10915 PF02911 Formyl transferase, C-terminal domain C3B42_RS10915 PF00551 Formyl transferase C3B42_RS10920 PF02075 Crossover junction endodeoxyribonuclease RuvC C3B42_RS10930 PF00482 Type II secretion system (T2SS), protein F C3B42_RS10940 PF12146 Serine aminopeptidase, S33 C3B42_RS10945 PF12146 Serine aminopeptidase, S33 C3B42_RS10965 PF02899 Phage integrase, N-terminal SAM-like domain C3B42_RS10965 PF00589 Phage integrase family C3B42_RS10990 PF00872 Transposase, Mutator family C3B42_RS10995 PF00872 Transposase, Mutator family