ALIDE_RS00005 PF00308 Bacterial dnaA protein ALIDE_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ALIDE_RS00005 PF11638 DnaA N-terminal domain ALIDE_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ALIDE_RS00010 PF02767 DNA polymerase III beta subunit, central domain ALIDE_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ALIDE_RS00015 PF00204 DNA gyrase B ALIDE_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus ALIDE_RS00015 PF01751 Toprim domain ALIDE_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS00020 PF03692 ALIDE_RS00020 ALIDE_RS00025 PF02515 CoA-transferase family III ALIDE_RS00030 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS00035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00035 PF03466 LysR substrate binding domain ALIDE_RS00040 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00045 PF07287 ALIDE_RS00045 ALIDE_RS00050 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS00050 PF00364 Biotin-requiring enzyme ALIDE_RS00050 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS00050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS00055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00055 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00060 PF01039 Carboxyl transferase domain ALIDE_RS00065 PF00708 Acylphosphatase ALIDE_RS00070 PF14697 4Fe-4S dicluster domain ALIDE_RS00075 PF00742 Homoserine dehydrogenase ALIDE_RS00075 PF03447 Homoserine dehydrogenase, NAD binding domain ALIDE_RS00080 PF00270 DEAD/DEAH box helicase ALIDE_RS00080 PF06733 DEAD_2 ALIDE_RS00080 PF13307 Helicase C-terminal domain ALIDE_RS00085 PF00929 Exonuclease ALIDE_RS00090 PF00877 NlpC/P60 family ALIDE_RS00095 PF00793 DAHP synthetase I family ALIDE_RS00100 PF00563 EAL domain ALIDE_RS00100 PF00989 PAS fold ALIDE_RS00100 PF00990 GGDEF domain ALIDE_RS00100 PF13185 GAF domain ALIDE_RS00100 PF13188 PAS domain ALIDE_RS00105 PF01614 Bacterial transcriptional regulator ALIDE_RS00105 PF09339 IclR helix-turn-helix domain ALIDE_RS00110 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00115 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00120 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00120 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00125 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00130 PF13380 CoA binding domain ALIDE_RS00130 PF13549 ATP-grasp domain ALIDE_RS00130 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE_RS00135 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS00140 PF01614 Bacterial transcriptional regulator ALIDE_RS00140 PF09339 IclR helix-turn-helix domain ALIDE_RS00145 PF09411 Lipid A 3-O-deacylase (PagL) ALIDE_RS00150 PF07813 LTXXQ motif family protein ALIDE_RS00155 PF04381 Putative exonuclease, RdgC ALIDE_RS00160 PF07670 Nucleoside recognition ALIDE_RS00165 PF11730 ALIDE_RS00165 ALIDE_RS00170 PF02449 Beta-galactosidase ALIDE_RS00175 PF00376 MerR family regulatory protein ALIDE_RS00175 PF09278 MerR, DNA binding ALIDE_RS00180 PF00403 Heavy-metal-associated domain ALIDE_RS00185 PF00122 E1-E2 ATPase ALIDE_RS00185 PF00403 Heavy-metal-associated domain ALIDE_RS00185 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS00190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS00190 PF00672 HAMP domain ALIDE_RS00190 PF12729 ALIDE_RS00190 ALIDE_RS00195 PF00873 AcrB/AcrD/AcrF family ALIDE_RS00200 PF16576 ALIDE_RS00200 ALIDE_RS00205 PF02321 Outer membrane efflux protein ALIDE_RS00210 PF00072 Response regulator receiver domain ALIDE_RS00210 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS00215 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS00215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS00215 PF08521 ALIDE_RS00215 ALIDE_RS00220 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ALIDE_RS00225 PF00043 Glutathione S-transferase, C-terminal domain ALIDE_RS00225 PF13417 Glutathione S-transferase, N-terminal domain ALIDE_RS00235 PF03358 NADPH-dependent FMN reductase ALIDE_RS00240 PF01134 Glucose inhibited division protein A ALIDE_RS00240 PF13932 GidA associated domain 3 ALIDE_RS00250 PF02527 rRNA small subunit methyltransferase G ALIDE_RS00255 PF01810 ALIDE_RS00255 ALIDE_RS00260 PF13614 AAA domain ALIDE_RS00265 PF06821 Serine hydrolase ALIDE_RS00270 PF02195 ParB-like nuclease domain ALIDE_RS00280 PF01471 Putative peptidoglycan binding domain ALIDE_RS00285 PF02311 AraC-like ligand binding domain ALIDE_RS00285 PF12833 Helix-turn-helix domain ALIDE_RS00290 PF07690 Major Facilitator Superfamily ALIDE_RS00295 PF00924 Mechanosensitive ion channel ALIDE_RS00300 PF01565 FAD binding domain ALIDE_RS00300 PF02913 FAD linked oxidases, C-terminal domain ALIDE_RS00310 PF05069 ALIDE_RS00310 ALIDE_RS00315 PF04233 ALIDE_RS00315 ALIDE_RS00320 PF06074 ALIDE_RS00320 ALIDE_RS00380 PF02086 D12 class N6 adenine-specific DNA methyltransferase ALIDE_RS00390 PF01923 Cobalamin adenosyltransferase ALIDE_RS00395 PF03061 Thioesterase superfamily ALIDE_RS00400 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ALIDE_RS00400 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ALIDE_RS00405 PF13453 ALIDE_RS00405 ALIDE_RS00410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00410 PF03466 LysR substrate binding domain ALIDE_RS00415 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00420 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS00425 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS00430 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS00435 PF00860 Permease family ALIDE_RS00440 PF05050 Methyltransferase FkbM domain ALIDE_RS00445 PF01494 FAD binding domain ALIDE_RS00450 PF00501 AMP-binding enzyme ALIDE_RS00450 PF16177 ALIDE_RS00450 ALIDE_RS00455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00455 PF03466 LysR substrate binding domain ALIDE_RS00460 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00465 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00475 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS00480 PF01066 CDP-alcohol phosphatidyltransferase ALIDE_RS00485 PF00593 TonB dependent receptor ALIDE_RS00485 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS00490 PF03929 ALIDE_RS00490 ALIDE_RS00500 PF03775 Septum formation inhibitor MinC, C-terminal domain ALIDE_RS00500 PF05209 Septum formation inhibitor MinC, N-terminal domain ALIDE_RS00505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE_RS00510 PF03776 Septum formation topological specificity factor MinE ALIDE_RS00515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00515 PF03466 LysR substrate binding domain ALIDE_RS00520 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00525 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ALIDE_RS00525 PF13378 Enolase C-terminal domain-like ALIDE_RS00530 PF01613 Flavin reductase like domain ALIDE_RS00535 PF12697 Alpha/beta hydrolase family ALIDE_RS00540 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS00545 PF00582 Universal stress protein family ALIDE_RS00550 PF00149 Calcineurin-like phosphoesterase ALIDE_RS00555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00555 PF03466 LysR substrate binding domain ALIDE_RS00565 PF00821 Phosphoenolpyruvate carboxykinase ALIDE_RS00570 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS00570 PF13291 ACT domain ALIDE_RS00575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00575 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00580 PF00122 E1-E2 ATPase ALIDE_RS00580 PF00689 Cation transporting ATPase, C-terminus ALIDE_RS00580 PF00690 Cation transporter/ATPase, N-terminus ALIDE_RS00580 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS00585 PF02574 Homocysteine S-methyltransferase ALIDE_RS00590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00590 PF03466 LysR substrate binding domain ALIDE_RS00595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00595 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00600 PF07883 Cupin domain ALIDE_RS00605 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00610 PF00270 DEAD/DEAH box helicase ALIDE_RS00610 PF00271 Helicase conserved C-terminal domain ALIDE_RS00610 PF00570 HRDC domain ALIDE_RS00610 PF09382 RQC domain ALIDE_RS00610 PF16124 ALIDE_RS00610 ALIDE_RS00615 PF04055 Radical SAM superfamily ALIDE_RS00615 PF13353 4Fe-4S single cluster domain ALIDE_RS00620 PF13597 Anaerobic ribonucleoside-triphosphate reductase ALIDE_RS00625 PF03477 ATP cone domain ALIDE_RS00625 PF13597 Anaerobic ribonucleoside-triphosphate reductase ALIDE_RS00630 PF00563 EAL domain ALIDE_RS00630 PF00990 GGDEF domain ALIDE_RS00630 PF08448 PAS fold ALIDE_RS00630 PF13426 PAS domain ALIDE_RS00630 PF17159 ALIDE_RS00630 ALIDE_RS00635 PF01814 Hemerythrin HHE cation binding domain ALIDE_RS00640 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE_RS00645 PF00158 Sigma-54 interaction domain ALIDE_RS00645 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS00650 PF08768 Domain of unknown function (DUF1794) ALIDE_RS00655 PF03313 ALIDE_RS00655 ALIDE_RS00655 PF03315 Serine dehydratase beta chain ALIDE_RS00660 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00665 PF00501 AMP-binding enzyme ALIDE_RS00665 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS00670 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00675 PF03061 Thioesterase superfamily ALIDE_RS00680 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00685 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00690 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00690 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00690 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00695 PF00501 AMP-binding enzyme ALIDE_RS00695 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS00700 PF00108 Thiolase, N-terminal domain ALIDE_RS00700 PF02803 Thiolase, C-terminal domain ALIDE_RS00705 PF00106 short chain dehydrogenase ALIDE_RS00710 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00715 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS00720 PF01614 Bacterial transcriptional regulator ALIDE_RS00720 PF09339 IclR helix-turn-helix domain ALIDE_RS00725 PF02515 CoA-transferase family III ALIDE_RS00730 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00735 PF01796 ALIDE_RS00735 ALIDE_RS00735 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) ALIDE_RS00740 PF02803 Thiolase, C-terminal domain ALIDE_RS00745 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00745 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00745 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00750 PF00501 AMP-binding enzyme ALIDE_RS00750 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS00755 PF01575 MaoC like domain ALIDE_RS00755 PF13452 N-terminal half of MaoC dehydratase ALIDE_RS00760 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS00765 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00770 PF01614 Bacterial transcriptional regulator ALIDE_RS00770 PF09339 IclR helix-turn-helix domain ALIDE_RS00775 PF07690 Major Facilitator Superfamily ALIDE_RS00780 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS00790 PF01609 Transposase DDE domain ALIDE_RS00790 PF05598 ALIDE_RS00790 ALIDE_RS00795 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00800 PF03972 MmgE/PrpD family ALIDE_RS00805 PF02515 CoA-transferase family III ALIDE_RS00810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00810 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00815 PF13452 N-terminal half of MaoC dehydratase ALIDE_RS00820 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS00825 PF01575 MaoC like domain ALIDE_RS00825 PF13452 N-terminal half of MaoC dehydratase ALIDE_RS00830 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS00835 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ALIDE_RS00835 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ALIDE_RS00840 PF00108 Thiolase, N-terminal domain ALIDE_RS00840 PF02803 Thiolase, C-terminal domain ALIDE_RS00845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00845 PF03466 LysR substrate binding domain ALIDE_RS00850 PF02515 CoA-transferase family III ALIDE_RS00855 PF00107 Zinc-binding dehydrogenase ALIDE_RS00855 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS00860 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00865 PF03466 LysR substrate binding domain ALIDE_RS00870 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00875 PF01546 Peptidase family M20/M25/M40 ALIDE_RS00875 PF07687 Peptidase dimerisation domain ALIDE_RS00880 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00885 PF00501 AMP-binding enzyme ALIDE_RS00885 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS00890 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00895 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00900 PF01546 Peptidase family M20/M25/M40 ALIDE_RS00900 PF07687 Peptidase dimerisation domain ALIDE_RS00905 PF01796 ALIDE_RS00905 ALIDE_RS00905 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) ALIDE_RS00910 PF02803 Thiolase, C-terminal domain ALIDE_RS00915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00915 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00920 PF03061 Thioesterase superfamily ALIDE_RS00925 PF09339 IclR helix-turn-helix domain ALIDE_RS00930 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00935 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS00940 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00940 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00940 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00945 PF01039 Carboxyl transferase domain ALIDE_RS00950 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS00950 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS00950 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS00955 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS00960 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS00960 PF00364 Biotin-requiring enzyme ALIDE_RS00960 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS00960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS00965 PF07287 ALIDE_RS00965 ALIDE_RS00970 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS00975 PF02515 CoA-transferase family III ALIDE_RS00980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00980 PF03466 LysR substrate binding domain ALIDE_RS00985 PF02515 CoA-transferase family III ALIDE_RS00990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS00990 PF03466 LysR substrate binding domain ALIDE_RS00995 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01000 PF02515 CoA-transferase family III ALIDE_RS01005 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALIDE_RS01005 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALIDE_RS01010 PF05232 ALIDE_RS01010 ALIDE_RS01020 PF06977 SdiA-regulated ALIDE_RS01025 PF00809 Pterin binding enzyme ALIDE_RS01025 PF02310 B12 binding domain ALIDE_RS01025 PF02607 B12 binding domain ALIDE_RS01025 PF02965 Vitamin B12 dependent methionine synthase, activation domain ALIDE_RS01030 PF13395 HNH endonuclease ALIDE_RS01035 PF01867 CRISPR associated protein Cas1 ALIDE_RS01040 PF09827 CRISPR associated protein Cas2 ALIDE_RS01050 PF03743 Bacterial conjugation TrbI-like protein ALIDE_RS01055 PF03524 Conjugal transfer protein ALIDE_RS01060 PF04335 VirB8 protein ALIDE_RS01065 PF04610 ALIDE_RS01065 ALIDE_RS01070 PF13605 ALIDE_RS01070 ALIDE_RS01075 PF03135 ALIDE_RS01075 ALIDE_RS01080 PF05101 ALIDE_RS01080 ALIDE_RS01085 PF04956 ALIDE_RS01085 ALIDE_RS01090 PF00437 Type II/IV secretion system protein ALIDE_RS01100 PF02534 Type IV secretory system Conjugative DNA transfer ALIDE_RS01110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS01110 PF03466 LysR substrate binding domain ALIDE_RS01115 PF00873 AcrB/AcrD/AcrF family ALIDE_RS01120 PF16576 ALIDE_RS01120 ALIDE_RS01125 PF02321 Outer membrane efflux protein ALIDE_RS01135 PF13663 ALIDE_RS01135 ALIDE_RS01140 PF00072 Response regulator receiver domain ALIDE_RS01140 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS01145 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS01145 PF00672 HAMP domain ALIDE_RS01145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS01155 PF00122 E1-E2 ATPase ALIDE_RS01155 PF00403 Heavy-metal-associated domain ALIDE_RS01155 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS01160 PF13411 MerR HTH family regulatory protein ALIDE_RS01165 PF11843 ALIDE_RS01165 ALIDE_RS01170 PF10502 Signal peptidase, peptidase S26 ALIDE_RS01175 PF11000 ALIDE_RS01175 ALIDE_RS01185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE_RS01190 PF10134 ALIDE_RS01190 ALIDE_RS01195 PF12728 Helix-turn-helix domain ALIDE_RS01200 PF10074 ALIDE_RS01200 ALIDE_RS01205 PF11171 ALIDE_RS01205 ALIDE_RS01210 PF01381 Helix-turn-helix ALIDE_RS01215 PF05284 ALIDE_RS01215 ALIDE_RS01220 PF04245 ALIDE_RS01220 ALIDE_RS01225 PF04607 Region found in RelA / SpoT proteins ALIDE_RS01235 PF02195 ParB-like nuclease domain ALIDE_RS01240 PF06067 ALIDE_RS01240 ALIDE_RS01260 PF05973 ALIDE_RS01260 ALIDE_RS01265 PF00589 Phage integrase family ALIDE_RS01265 PF13356 Domain of unknown function (DUF4102) ALIDE_RS01265 PF14659 Phage integrase, N-terminal SAM-like domain ALIDE_RS01270 PF01202 Shikimate kinase ALIDE_RS01275 PF03631 ALIDE_RS01275 ALIDE_RS01280 PF05433 ALIDE_RS01280 ALIDE_RS01285 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS01285 PF00970 Oxidoreductase FAD-binding domain ALIDE_RS01290 PF13458 Periplasmic binding protein ALIDE_RS01295 PF02653 ALIDE_RS01295 ALIDE_RS01300 PF00005 ABC transporter ALIDE_RS01300 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS01305 PF00112 Papain family cysteine protease ALIDE_RS01315 PF16220 ALIDE_RS01315 ALIDE_RS01325 PF01078 Magnesium chelatase, subunit ChlI ALIDE_RS01325 PF13335 ALIDE_RS01325 ALIDE_RS01325 PF13541 Subunit ChlI of Mg-chelatase ALIDE_RS01330 PF09694 ALIDE_RS01330 ALIDE_RS01335 PF00543 Nitrogen regulatory protein P-II ALIDE_RS01340 PF00909 Ammonium Transporter Family ALIDE_RS01345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS01345 PF03466 LysR substrate binding domain ALIDE_RS01350 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS01350 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE_RS01355 PF00171 Aldehyde dehydrogenase family ALIDE_RS01360 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01365 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS01370 PF13458 Periplasmic binding protein ALIDE_RS01375 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS01375 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE_RS01380 PF12697 Alpha/beta hydrolase family ALIDE_RS01390 PF05145 ALIDE_RS01390 ALIDE_RS01395 PF03972 MmgE/PrpD family ALIDE_RS01400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS01400 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS01400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS01405 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01410 PF13380 CoA binding domain ALIDE_RS01410 PF13549 ATP-grasp domain ALIDE_RS01410 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE_RS01415 PF01565 FAD binding domain ALIDE_RS01420 PF06912 ALIDE_RS01420 ALIDE_RS01425 PF02754 ALIDE_RS01425 ALIDE_RS01425 PF12838 4Fe-4S dicluster domain ALIDE_RS01430 PF04352 ProQ/FINO family ALIDE_RS01435 PF00892 EamA-like transporter family ALIDE_RS01440 PF07690 Major Facilitator Superfamily ALIDE_RS01445 PF00842 Alanine racemase, C-terminal domain ALIDE_RS01445 PF01168 Alanine racemase, N-terminal domain ALIDE_RS01450 PF00034 Cytochrome c ALIDE_RS01450 PF03150 Di-haem cytochrome c peroxidase ALIDE_RS01455 PF02798 Glutathione S-transferase, N-terminal domain ALIDE_RS01455 PF14497 Glutathione S-transferase, C-terminal domain ALIDE_RS01460 PF13481 AAA domain ALIDE_RS01465 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01470 PF01425 Amidase ALIDE_RS01480 PF01063 Aminotransferase class IV ALIDE_RS01485 PF10276 Zinc-finger domain ALIDE_RS01490 PF04932 ALIDE_RS01490 ALIDE_RS01495 PF00534 Glycosyl transferases group 1 ALIDE_RS01495 PF13439 Glycosyltransferase Family 4 ALIDE_RS01500 PF00535 Glycosyl transferase family 2 ALIDE_RS01505 PF05704 ALIDE_RS01505 ALIDE_RS01510 PF03060 Nitronate monooxygenase ALIDE_RS01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS01515 PF03466 LysR substrate binding domain ALIDE_RS01520 PF06779 ALIDE_RS01520 ALIDE_RS01525 PF03473 MOSC domain ALIDE_RS01525 PF03475 3-alpha domain ALIDE_RS01530 PF00578 AhpC/TSA family ALIDE_RS01535 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ALIDE_RS01540 PF01575 MaoC like domain ALIDE_RS01545 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS01550 PF03466 LysR substrate binding domain ALIDE_RS01555 PF02515 CoA-transferase family III ALIDE_RS01560 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS01560 PF00672 HAMP domain ALIDE_RS01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS01565 PF00072 Response regulator receiver domain ALIDE_RS01565 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS01570 PF07690 Major Facilitator Superfamily ALIDE_RS01575 PF07883 Cupin domain ALIDE_RS01575 PF12833 Helix-turn-helix domain ALIDE_RS01580 PF00892 EamA-like transporter family ALIDE_RS01585 PF01435 Peptidase family M48 ALIDE_RS01590 PF03929 ALIDE_RS01590 ALIDE_RS01595 PF12833 Helix-turn-helix domain ALIDE_RS01600 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS01600 PF07729 FCD domain ALIDE_RS01605 PF00158 Sigma-54 interaction domain ALIDE_RS01605 PF02830 V4R domain ALIDE_RS01605 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS01605 PF06505 ALIDE_RS01605 ALIDE_RS01610 PF06099 ALIDE_RS01610 ALIDE_RS01615 PF02332 Methane/Phenol/Toluene Hydroxylase ALIDE_RS01620 PF02406 MmoB/DmpM family ALIDE_RS01625 PF02332 Methane/Phenol/Toluene Hydroxylase ALIDE_RS01625 PF04945 YHS domain ALIDE_RS01630 PF04663 Phenol hydroxylase conserved region ALIDE_RS01635 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS01635 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS01635 PF00970 Oxidoreductase FAD-binding domain ALIDE_RS01640 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS01645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS01650 PF03928 Domain of unknown function (DUF336) ALIDE_RS01660 PF13557 ALIDE_RS01660 ALIDE_RS01665 PF00171 Aldehyde dehydrogenase family ALIDE_RS01670 PF00561 alpha/beta hydrolase fold ALIDE_RS01675 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE_RS01680 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALIDE_RS01680 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ALIDE_RS01685 PF00682 HMGL-like ALIDE_RS01685 PF07836 DmpG-like communication domain ALIDE_RS01690 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE_RS01695 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01700 PF01361 Tautomerase enzyme ALIDE_RS01705 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS01710 PF01614 Bacterial transcriptional regulator ALIDE_RS01710 PF09339 IclR helix-turn-helix domain ALIDE_RS01715 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01720 PF04909 Amidohydrolase ALIDE_RS01725 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01730 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS01735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE_RS01735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS01740 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01745 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01750 PF04909 Amidohydrolase ALIDE_RS01755 PF08450 SMP-30/Gluconolaconase/LRE-like region ALIDE_RS01760 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01765 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS01765 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE_RS01770 PF00171 Aldehyde dehydrogenase family ALIDE_RS01775 PF01614 Bacterial transcriptional regulator ALIDE_RS01775 PF09339 IclR helix-turn-helix domain ALIDE_RS01785 PF00561 alpha/beta hydrolase fold ALIDE_RS01790 PF13458 Periplasmic binding protein ALIDE_RS01795 PF02653 ALIDE_RS01795 ALIDE_RS01800 PF02653 ALIDE_RS01800 ALIDE_RS01805 PF00005 ABC transporter ALIDE_RS01805 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS01810 PF00005 ABC transporter ALIDE_RS01815 PF04909 Amidohydrolase ALIDE_RS01820 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS01820 PF07729 FCD domain ALIDE_RS01825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS01825 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS01825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS01830 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS01835 PF01636 Phosphotransferase enzyme family ALIDE_RS01840 PF03372 Endonuclease/Exonuclease/phosphatase family ALIDE_RS01845 PF00156 Phosphoribosyl transferase domain ALIDE_RS01855 PF02637 GatB domain ALIDE_RS01855 PF02934 GatB/GatE catalytic domain ALIDE_RS01860 PF01425 Amidase ALIDE_RS01865 PF02686 Glu-tRNAGln amidotransferase C subunit ALIDE_RS01870 PF06723 MreB/Mbl protein ALIDE_RS01875 PF04085 rod shape-determining protein MreC ALIDE_RS01880 PF04093 ALIDE_RS01880 ALIDE_RS01885 PF00905 Penicillin binding protein transpeptidase domain ALIDE_RS01885 PF03717 Penicillin-binding Protein dimerisation domain ALIDE_RS01890 PF00491 Arginase family ALIDE_RS01895 PF01925 ALIDE_RS01895 ALIDE_RS01900 PF00732 GMC oxidoreductase ALIDE_RS01900 PF05199 GMC oxidoreductase ALIDE_RS01905 PF02405 ALIDE_RS01905 ALIDE_RS01910 PF00005 ABC transporter ALIDE_RS01915 PF02470 ALIDE_RS01915 ALIDE_RS01920 PF03886 Protein of unknown function (DUF330) ALIDE_RS01925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS01925 PF03466 LysR substrate binding domain ALIDE_RS01930 PF00330 Aconitase family (aconitate hydratase) ALIDE_RS01930 PF00694 Aconitase C-terminal domain ALIDE_RS01935 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS01940 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS01945 PF01914 ALIDE_RS01945 ALIDE_RS01950 PF01738 Dienelactone hydrolase family ALIDE_RS01955 PF07690 Major Facilitator Superfamily ALIDE_RS01960 PF13533 Biotin-lipoyl like ALIDE_RS01960 PF16576 ALIDE_RS01960 ALIDE_RS01965 PF02321 Outer membrane efflux protein ALIDE_RS01970 PF12802 MarR family ALIDE_RS01975 PF01544 CorA-like Mg2+ transporter protein ALIDE_RS01980 PF00490 Delta-aminolevulinic acid dehydratase ALIDE_RS01990 PF03653 ALIDE_RS01990 ALIDE_RS01995 PF04892 ALIDE_RS01995 ALIDE_RS02005 PF12146 Putative lysophospholipase ALIDE_RS02010 PF00768 D-alanyl-D-alanine carboxypeptidase ALIDE_RS02010 PF07943 Penicillin-binding protein 5, C-terminal domain ALIDE_RS02015 PF00164 Ribosomal protein S12/S23 ALIDE_RS02020 PF00177 Ribosomal protein S7p/S5e ALIDE_RS02025 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS02025 PF00679 Elongation factor G C-terminus ALIDE_RS02025 PF03144 Elongation factor Tu domain 2 ALIDE_RS02025 PF03764 Elongation factor G, domain IV ALIDE_RS02025 PF14492 Elongation Factor G, domain II ALIDE_RS02030 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS02030 PF03143 Elongation factor Tu C-terminal domain ALIDE_RS02030 PF03144 Elongation factor Tu domain 2 ALIDE_RS02035 PF00338 Ribosomal protein S10p/S20e ALIDE_RS02040 PF00297 Ribosomal protein L3 ALIDE_RS02045 PF00573 Ribosomal protein L4/L1 family ALIDE_RS02050 PF00276 Ribosomal protein L23 ALIDE_RS02055 PF00181 Ribosomal Proteins L2, RNA binding domain ALIDE_RS02055 PF03947 Ribosomal Proteins L2, C-terminal domain ALIDE_RS02060 PF00203 Ribosomal protein S19 ALIDE_RS02065 PF00237 Ribosomal protein L22p/L17e ALIDE_RS02070 PF00189 Ribosomal protein S3, C-terminal domain ALIDE_RS02070 PF07650 KH domain ALIDE_RS02075 PF00252 Ribosomal protein L16p/L10e ALIDE_RS02080 PF00831 Ribosomal L29 protein ALIDE_RS02085 PF00366 Ribosomal protein S17 ALIDE_RS02090 PF08534 Redoxin ALIDE_RS02095 PF00583 Acetyltransferase (GNAT) family ALIDE_RS02100 PF01292 Prokaryotic cytochrome b561 ALIDE_RS02105 PF08534 Redoxin ALIDE_RS02115 PF03610 PTS system fructose IIA component ALIDE_RS02120 PF00381 PTS HPr component phosphorylation site ALIDE_RS02125 PF00391 PEP-utilising enzyme, mobile domain ALIDE_RS02125 PF02896 PEP-utilising enzyme, TIM barrel domain ALIDE_RS02125 PF05524 PEP-utilising enzyme, N-terminal ALIDE_RS02130 PF04055 Radical SAM superfamily ALIDE_RS02130 PF16881 ALIDE_RS02130 ALIDE_RS02135 PF03099 Biotin/lipoate A/B protein ligase family ALIDE_RS02140 PF04359 Protein of unknown function (DUF493) ALIDE_RS02145 PF03899 ALIDE_RS02145 ALIDE_RS02150 PF00119 ATP synthase A chain ALIDE_RS02155 PF00137 ATP synthase subunit C ALIDE_RS02160 PF00430 ATP synthase B/B' CF(0) ALIDE_RS02165 PF00213 ATP synthase delta (OSCP) subunit ALIDE_RS02170 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALIDE_RS02170 PF00306 ATP synthase alpha/beta chain, C terminal domain ALIDE_RS02170 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALIDE_RS02175 PF00231 ATP synthase ALIDE_RS02180 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALIDE_RS02180 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALIDE_RS02185 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ALIDE_RS02200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS02200 PF03466 LysR substrate binding domain ALIDE_RS02205 PF04536 TLP18 ALIDE_RS02210 PF04536 TLP18 ALIDE_RS02215 PF04011 LemA family ALIDE_RS02220 PF13474 SnoaL-like domain ALIDE_RS02225 PF11161 ALIDE_RS02225 ALIDE_RS02230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS02235 PF02321 Outer membrane efflux protein ALIDE_RS02240 PF00873 AcrB/AcrD/AcrF family ALIDE_RS02245 PF00529 HlyD family secretion protein ALIDE_RS02245 PF16576 ALIDE_RS02245 ALIDE_RS02250 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS02250 PF08361 MAATS-type transcriptional repressor, C-terminal region ALIDE_RS02275 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS02275 PF03143 Elongation factor Tu C-terminal domain ALIDE_RS02275 PF03144 Elongation factor Tu domain 2 ALIDE_RS02285 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ALIDE_RS02290 PF00467 KOW motif ALIDE_RS02290 PF02357 Transcription termination factor nusG ALIDE_RS02295 PF00298 Ribosomal protein L11, RNA binding domain ALIDE_RS02295 PF03946 Ribosomal protein L11, N-terminal domain ALIDE_RS02300 PF00687 Ribosomal protein L1p/L10e family ALIDE_RS02305 PF00466 Ribosomal protein L10 ALIDE_RS02310 PF00542 Ribosomal protein L7/L12 C-terminal domain ALIDE_RS02310 PF16320 ALIDE_RS02310 ALIDE_RS02315 PF00562 RNA polymerase Rpb2, domain 6 ALIDE_RS02315 PF04560 RNA polymerase Rpb2, domain 7 ALIDE_RS02315 PF04561 RNA polymerase Rpb2, domain 2 ALIDE_RS02315 PF04563 RNA polymerase beta subunit ALIDE_RS02315 PF04565 RNA polymerase Rpb2, domain 3 ALIDE_RS02315 PF10385 RNA polymerase beta subunit external 1 domain ALIDE_RS02320 PF00623 RNA polymerase Rpb1, domain 2 ALIDE_RS02320 PF04983 RNA polymerase Rpb1, domain 3 ALIDE_RS02320 PF04997 RNA polymerase Rpb1, domain 1 ALIDE_RS02320 PF04998 RNA polymerase Rpb1, domain 5 ALIDE_RS02320 PF05000 RNA polymerase Rpb1, domain 4 ALIDE_RS02325 PF04011 LemA family ALIDE_RS02330 PF01029 NusB family ALIDE_RS02330 PF01189 NOL1/NOP2/sun family ALIDE_RS02335 PF14334 ALIDE_RS02335 ALIDE_RS02340 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS02340 PF00672 HAMP domain ALIDE_RS02340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS02340 PF08448 PAS fold ALIDE_RS02345 PF00072 Response regulator receiver domain ALIDE_RS02345 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS02365 PF13560 Helix-turn-helix domain ALIDE_RS02370 PF06114 Domain of unknown function (DUF955) ALIDE_RS02375 PF00665 Integrase core domain ALIDE_RS02380 PF01695 IstB-like ATP binding protein ALIDE_RS02385 PF06114 Domain of unknown function (DUF955) ALIDE_RS02395 PF02515 CoA-transferase family III ALIDE_RS02400 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALIDE_RS02400 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALIDE_RS02400 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALIDE_RS02405 PF01370 NAD dependent epimerase/dehydratase family ALIDE_RS02410 PF13231 ALIDE_RS02410 ALIDE_RS02415 PF00535 Glycosyl transferase family 2 ALIDE_RS02420 PF03706 ALIDE_RS02420 ALIDE_RS02425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALIDE_RS02430 PF02021 Uncharacterised protein family UPF0102 ALIDE_RS02435 PF13580 SIS domain ALIDE_RS02440 PF04972 BON domain ALIDE_RS02445 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS02445 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE_RS02450 PF00437 Type II/IV secretion system protein ALIDE_RS02455 PF00027 Cyclic nucleotide-binding domain ALIDE_RS02460 PF00437 Type II/IV secretion system protein ALIDE_RS02465 PF01168 Alanine racemase, N-terminal domain ALIDE_RS02470 PF00266 Aminotransferase class-V ALIDE_RS02480 PF04286 ALIDE_RS02480 ALIDE_RS02485 PF01565 FAD binding domain ALIDE_RS02485 PF02913 FAD linked oxidases, C-terminal domain ALIDE_RS02490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS02490 PF03466 LysR substrate binding domain ALIDE_RS02495 PF00551 Formyl transferase ALIDE_RS02500 PF00563 EAL domain ALIDE_RS02500 PF00990 GGDEF domain ALIDE_RS02500 PF08447 PAS fold ALIDE_RS02500 PF08448 PAS fold ALIDE_RS02500 PF13426 PAS domain ALIDE_RS02505 PF04187 Protein of unknown function, DUF399 ALIDE_RS02510 PF02867 Ribonucleotide reductase, barrel domain ALIDE_RS02515 PF00672 HAMP domain ALIDE_RS02515 PF01590 GAF domain ALIDE_RS02515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS02515 PF07730 Histidine kinase ALIDE_RS02515 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ALIDE_RS02520 PF00072 Response regulator receiver domain ALIDE_RS02520 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS02525 PF07690 Major Facilitator Superfamily ALIDE_RS02530 PF07690 Major Facilitator Superfamily ALIDE_RS02535 PF00384 Molybdopterin oxidoreductase ALIDE_RS02535 PF01568 Molydopterin dinucleotide binding domain ALIDE_RS02535 PF14710 Respiratory nitrate reductase alpha N-terminal ALIDE_RS02540 PF13247 4Fe-4S dicluster domain ALIDE_RS02540 PF14711 Respiratory nitrate reductase beta C-terminal ALIDE_RS02545 PF02613 Nitrate reductase delta subunit ALIDE_RS02550 PF02665 Nitrate reductase gamma subunit ALIDE_RS02555 PF00639 PPIC-type PPIASE domain ALIDE_RS02560 PF00484 Carbonic anhydrase ALIDE_RS02565 PF00881 Nitroreductase family ALIDE_RS02575 PF01814 Hemerythrin HHE cation binding domain ALIDE_RS02580 PF12091 ALIDE_RS02580 ALIDE_RS02585 PF11306 Protein of unknown function (DUF3108) ALIDE_RS02590 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE_RS02595 PF13414 TPR repeat ALIDE_RS02595 PF13432 Tetratricopeptide repeat ALIDE_RS02595 PF13844 Glycosyl transferase family 41 ALIDE_RS02600 PF00384 Molybdopterin oxidoreductase ALIDE_RS02600 PF01568 Molydopterin dinucleotide binding domain ALIDE_RS02600 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS02605 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS02610 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS02615 PF02515 CoA-transferase family III ALIDE_RS02620 PF01575 MaoC like domain ALIDE_RS02625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS02625 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS02625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS02630 PF01575 MaoC like domain ALIDE_RS02635 PF03972 MmgE/PrpD family ALIDE_RS02640 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS02645 PF01614 Bacterial transcriptional regulator ALIDE_RS02645 PF09339 IclR helix-turn-helix domain ALIDE_RS02650 PF01546 Peptidase family M20/M25/M40 ALIDE_RS02650 PF07687 Peptidase dimerisation domain ALIDE_RS02655 PF00887 Acyl CoA binding protein ALIDE_RS02660 PF10023 ALIDE_RS02660 ALIDE_RS02665 PF03352 Methyladenine glycosylase ALIDE_RS02670 PF02353 Mycolic acid cyclopropane synthetase ALIDE_RS02675 PF08895 ALIDE_RS02675 ALIDE_RS02680 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS02685 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS02690 PF00501 AMP-binding enzyme ALIDE_RS02695 PF00005 ABC transporter ALIDE_RS02700 PF13458 Periplasmic binding protein ALIDE_RS02705 PF02653 ALIDE_RS02705 ALIDE_RS02710 PF02653 ALIDE_RS02710 ALIDE_RS02715 PF00005 ABC transporter ALIDE_RS02715 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS02720 PF00501 AMP-binding enzyme ALIDE_RS02725 PF13401 AAA domain ALIDE_RS02730 PF16537 ALIDE_RS02730 ALIDE_RS02735 PF00027 Cyclic nucleotide-binding domain ALIDE_RS02735 PF13545 Crp-like helix-turn-helix domain ALIDE_RS02740 PF00849 RNA pseudouridylate synthase ALIDE_RS02740 PF01479 S4 domain ALIDE_RS02745 PF00183 Hsp90 protein ALIDE_RS02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS02755 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS02760 PF01636 Phosphotransferase enzyme family ALIDE_RS02765 PF00069 Protein kinase domain ALIDE_RS02765 PF00582 Universal stress protein family ALIDE_RS02770 PF12850 Calcineurin-like phosphoesterase superfamily domain ALIDE_RS02775 PF02515 CoA-transferase family III ALIDE_RS02780 PF01575 MaoC like domain ALIDE_RS02785 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS02790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE_RS02790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE_RS02795 PF00732 GMC oxidoreductase ALIDE_RS02795 PF05199 GMC oxidoreductase ALIDE_RS02805 PF01061 ALIDE_RS02805 ALIDE_RS02810 PF00005 ABC transporter ALIDE_RS02815 PF07519 Tannase and feruloyl esterase ALIDE_RS02820 PF01048 Phosphorylase superfamily ALIDE_RS02820 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ALIDE_RS02825 PF00563 EAL domain ALIDE_RS02825 PF00990 GGDEF domain ALIDE_RS02825 PF08448 PAS fold ALIDE_RS02825 PF13426 PAS domain ALIDE_RS02830 PF01545 Cation efflux family ALIDE_RS02830 PF16916 ALIDE_RS02830 ALIDE_RS02835 PF02580 D-Tyr-tRNA(Tyr) deacylase ALIDE_RS02840 PF01925 ALIDE_RS02840 ALIDE_RS02845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS02845 PF03466 LysR substrate binding domain ALIDE_RS02850 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS02855 PF02515 CoA-transferase family III ALIDE_RS02860 PF00107 Zinc-binding dehydrogenase ALIDE_RS02865 PF00501 AMP-binding enzyme ALIDE_RS02865 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS02870 PF02130 Uncharacterized protein family UPF0054 ALIDE_RS02875 PF02562 PhoH-like protein ALIDE_RS02880 PF01330 RuvA N terminal domain ALIDE_RS02880 PF07499 RuvA, C-terminal domain ALIDE_RS02880 PF14520 Helix-hairpin-helix domain ALIDE_RS02890 PF00012 Hsp70 protein ALIDE_RS02890 PF12531 ALIDE_RS02890 ALIDE_RS02895 PF00012 Hsp70 protein ALIDE_RS02900 PF10816 ALIDE_RS02900 ALIDE_RS02905 PF05491 Holliday junction DNA helicase ruvB C-terminus ALIDE_RS02905 PF05496 Holliday junction DNA helicase ruvB N-terminus ALIDE_RS02910 PF02308 ALIDE_RS02910 ALIDE_RS02925 PF01168 Alanine racemase, N-terminal domain ALIDE_RS02925 PF14031 Putative serine dehydratase domain ALIDE_RS02930 PF00300 Histidine phosphatase superfamily (branch 1) ALIDE_RS02935 PF13590 Domain of unknown function (DUF4136) ALIDE_RS02940 PF01171 PP-loop family ALIDE_RS02945 PF02152 Dihydroneopterin aldolase ALIDE_RS02950 PF02152 Dihydroneopterin aldolase ALIDE_RS02955 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS02960 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase ALIDE_RS02965 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS02970 PF11146 ALIDE_RS02970 ALIDE_RS02975 PF00480 ROK family ALIDE_RS02980 PF00982 Glycosyltransferase family 20 ALIDE_RS02990 PF02358 Trehalose-phosphatase ALIDE_RS02995 PF00085 Thioredoxin ALIDE_RS03000 PF01743 Poly A polymerase head domain ALIDE_RS03000 PF01966 HD domain ALIDE_RS03000 PF12627 Probable RNA and SrmB- binding site of polymerase A ALIDE_RS03005 PF00158 Sigma-54 interaction domain ALIDE_RS03005 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS03010 PF07287 ALIDE_RS03010 ALIDE_RS03015 PF14330 ALIDE_RS03015 ALIDE_RS03020 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS03025 PF00149 Calcineurin-like phosphoesterase ALIDE_RS03030 PF13410 Glutathione S-transferase, C-terminal domain ALIDE_RS03030 PF13417 Glutathione S-transferase, N-terminal domain ALIDE_RS03035 PF01812 5-formyltetrahydrofolate cyclo-ligase family ALIDE_RS03040 PF01464 Transglycosylase SLT domain ALIDE_RS03045 PF01292 Prokaryotic cytochrome b561 ALIDE_RS03050 PF13670 ALIDE_RS03050 ALIDE_RS03055 PF13640 2OG-Fe(II) oxygenase superfamily ALIDE_RS03060 PF01070 FMN-dependent dehydrogenase ALIDE_RS03065 PF00593 TonB dependent receptor ALIDE_RS03065 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS03070 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS03075 PF00501 AMP-binding enzyme ALIDE_RS03075 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS03080 PF12697 Alpha/beta hydrolase family ALIDE_RS03085 PF00109 Beta-ketoacyl synthase, N-terminal domain ALIDE_RS03085 PF02801 Beta-ketoacyl synthase, C-terminal domain ALIDE_RS03090 PF07977 FabA-like domain ALIDE_RS03095 PF00795 Carbon-nitrogen hydrolase ALIDE_RS03100 PF00571 CBS domain ALIDE_RS03100 PF03471 Transporter associated domain ALIDE_RS03105 PF00583 Acetyltransferase (GNAT) family ALIDE_RS03110 PF01037 AsnC family ALIDE_RS03110 PF13404 AsnC-type helix-turn-helix domain ALIDE_RS03115 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS03115 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ALIDE_RS03120 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ALIDE_RS03125 PF00676 Dehydrogenase E1 component ALIDE_RS03125 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal ALIDE_RS03130 PF02779 Transketolase, pyrimidine binding domain ALIDE_RS03130 PF02780 Transketolase, C-terminal domain ALIDE_RS03135 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE_RS03135 PF00364 Biotin-requiring enzyme ALIDE_RS03135 PF02817 e3 binding domain ALIDE_RS03140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE_RS03140 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS03145 PF02091 Glycyl-tRNA synthetase alpha subunit ALIDE_RS03150 PF02092 ALIDE_RS03150 ALIDE_RS03150 PF05746 DALR anticodon binding domain ALIDE_RS03155 PF08645 Polynucleotide kinase 3 phosphatase ALIDE_RS03160 PF01553 Acyltransferase ALIDE_RS03165 PF01863 Protein of unknown function DUF45 ALIDE_RS03170 PF00581 Rhodanese-like domain ALIDE_RS03175 PF01476 LysM domain ALIDE_RS03175 PF04972 BON domain ALIDE_RS03180 PF03309 Type III pantothenate kinase ALIDE_RS03185 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS03185 PF13972 Bacterial transcriptional repressor ALIDE_RS03190 PF05597 ALIDE_RS03190 ALIDE_RS03195 PF16363 ALIDE_RS03195 ALIDE_RS03200 PF04321 RmlD substrate binding domain ALIDE_RS03205 PF00483 Nucleotidyl transferase ALIDE_RS03210 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ALIDE_RS03215 PF00534 Glycosyl transferases group 1 ALIDE_RS03215 PF09314 ALIDE_RS03215 ALIDE_RS03220 PF00535 Glycosyl transferase family 2 ALIDE_RS03225 PF00437 Type II/IV secretion system protein ALIDE_RS03225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ALIDE_RS03230 PF00482 Type II secretion system (T2SS), protein F ALIDE_RS03235 PF08334 Type II secretion system (T2SS), protein G ALIDE_RS03235 PF13544 ALIDE_RS03235 ALIDE_RS03240 PF13544 ALIDE_RS03240 ALIDE_RS03245 PF13633 Prokaryotic N-terminal methylation site ALIDE_RS03250 PF13544 ALIDE_RS03250 ALIDE_RS03255 PF03934 Type II secretion system (T2SS), protein K ALIDE_RS03260 PF05137 ALIDE_RS03260 ALIDE_RS03265 PF10741 ALIDE_RS03265 ALIDE_RS03275 PF00263 ALIDE_RS03275 ALIDE_RS03275 PF03958 Bacterial type II/III secretion system short domain ALIDE_RS03295 PF13145 PPIC-type PPIASE domain ALIDE_RS03300 PF08241 Methyltransferase domain ALIDE_RS03305 PF00535 Glycosyl transferase family 2 ALIDE_RS03310 PF13692 Glycosyl transferases group 1 ALIDE_RS03315 PF01061 ALIDE_RS03315 ALIDE_RS03320 PF00005 ABC transporter ALIDE_RS03320 PF14524 Wzt C-terminal domain ALIDE_RS03330 PF13489 Methyltransferase domain ALIDE_RS03335 PF01464 Transglycosylase SLT domain ALIDE_RS03335 PF13511 ALIDE_RS03335 ALIDE_RS03340 PF00953 Glycosyl transferase family 4 ALIDE_RS03345 PF00696 Amino acid kinase family ALIDE_RS03350 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS03355 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS03360 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS03360 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS03360 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS03360 PF12418 ALIDE_RS03360 ALIDE_RS03360 PF12806 ALIDE_RS03360 ALIDE_RS03365 PF09917 Uncharacterized protein conserved in bacteria (DUF2147) ALIDE_RS03370 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS03370 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE_RS03370 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE_RS03375 PF00108 Thiolase, N-terminal domain ALIDE_RS03375 PF02803 Thiolase, C-terminal domain ALIDE_RS03380 PF13622 Thioesterase-like superfamily ALIDE_RS03385 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS03390 PF04519 ALIDE_RS03390 ALIDE_RS03395 PF03061 Thioesterase superfamily ALIDE_RS03400 PF00005 ABC transporter ALIDE_RS03400 PF00664 ABC transporter transmembrane region ALIDE_RS03405 PF00501 AMP-binding enzyme ALIDE_RS03405 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS03410 PF01575 MaoC like domain ALIDE_RS03415 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS03420 PF03060 Nitronate monooxygenase ALIDE_RS03425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS03425 PF03466 LysR substrate binding domain ALIDE_RS03430 PF12643 ALIDE_RS03430 ALIDE_RS03435 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE_RS03440 PF06808 ALIDE_RS03440 ALIDE_RS03445 PF04290 ALIDE_RS03445 ALIDE_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS03450 PF03466 LysR substrate binding domain ALIDE_RS03455 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS03460 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS03465 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS03470 PF00005 ABC transporter ALIDE_RS03475 PF02423 Ornithine cyclodeaminase/mu-crystallin family ALIDE_RS03480 PF08282 haloacid dehalogenase-like hydrolase ALIDE_RS03485 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS03485 PF03144 Elongation factor Tu domain 2 ALIDE_RS03485 PF16658 ALIDE_RS03485 ALIDE_RS03490 PF00106 short chain dehydrogenase ALIDE_RS03495 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ALIDE_RS03495 PF05221 S-adenosyl-L-homocysteine hydrolase ALIDE_RS03500 PF01728 FtsJ-like methyltransferase ALIDE_RS03505 PF02219 Methylenetetrahydrofolate reductase ALIDE_RS03510 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel ALIDE_RS03515 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ ALIDE_RS03520 PF00069 Protein kinase domain ALIDE_RS03525 PF00572 Ribosomal protein L13 ALIDE_RS03530 PF00380 Ribosomal protein S9/S16 ALIDE_RS03535 PF01521 Iron-sulphur cluster biosynthesis ALIDE_RS03540 PF03702 Uncharacterised protein family (UPF0075) ALIDE_RS03545 PF01551 Peptidase family M23 ALIDE_RS03550 PF00579 tRNA synthetases class I (W and Y) ALIDE_RS03550 PF01479 S4 domain ALIDE_RS03555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS03555 PF03466 LysR substrate binding domain ALIDE_RS03560 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE_RS03560 PF12804 MobA-like NTP transferase domain ALIDE_RS03565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS03570 PF13591 MerR HTH family regulatory protein ALIDE_RS03575 PF00226 DnaJ domain ALIDE_RS03575 PF01556 DnaJ C terminal domain ALIDE_RS03580 PF01037 AsnC family ALIDE_RS03580 PF13404 AsnC-type helix-turn-helix domain ALIDE_RS03585 PF01380 SIS domain ALIDE_RS03585 PF13522 Glutamine amidotransferase domain ALIDE_RS03590 PF13910 ALIDE_RS03590 ALIDE_RS03595 PF02601 ALIDE_RS03595 ALIDE_RS03600 PF00665 Integrase core domain ALIDE_RS03600 PF13276 ALIDE_RS03600 ALIDE_RS03605 PF01527 Transposase ALIDE_RS03610 PF10923 ALIDE_RS03610 ALIDE_RS03620 PF00174 Oxidoreductase molybdopterin binding domain ALIDE_RS03625 PF01292 Prokaryotic cytochrome b561 ALIDE_RS03630 PF00072 Response regulator receiver domain ALIDE_RS03630 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS03635 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS03635 PF00672 HAMP domain ALIDE_RS03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS03655 PF00483 Nucleotidyl transferase ALIDE_RS03655 PF01050 Mannose-6-phosphate isomerase ALIDE_RS03660 PF02563 Polysaccharide biosynthesis/export protein ALIDE_RS03660 PF10531 SLBB domain ALIDE_RS03665 PF02706 Chain length determinant protein ALIDE_RS03665 PF13807 ALIDE_RS03665 ALIDE_RS03670 PF13614 AAA domain ALIDE_RS03675 PF13401 AAA domain ALIDE_RS03680 PF01522 Polysaccharide deacetylase ALIDE_RS03680 PF11959 ALIDE_RS03680 ALIDE_RS03685 PF13480 Acetyltransferase (GNAT) domain ALIDE_RS03690 PF13692 Glycosyl transferases group 1 ALIDE_RS03695 PF09721 ALIDE_RS03695 ALIDE_RS03695 PF11984 ALIDE_RS03695 ALIDE_RS03700 PF00733 Asparagine synthase ALIDE_RS03700 PF13537 Glutamine amidotransferase domain ALIDE_RS03705 PF00534 Glycosyl transferases group 1 ALIDE_RS03705 PF13439 Glycosyltransferase Family 4 ALIDE_RS03710 PF00534 Glycosyl transferases group 1 ALIDE_RS03710 PF13579 Glycosyl transferase 4-like domain ALIDE_RS03715 PF02350 UDP-N-acetylglucosamine 2-epimerase ALIDE_RS03720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALIDE_RS03720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALIDE_RS03720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALIDE_RS03725 PF00534 Glycosyl transferases group 1 ALIDE_RS03725 PF13439 Glycosyltransferase Family 4 ALIDE_RS03730 PF04932 ALIDE_RS03730 ALIDE_RS03735 PF01522 Polysaccharide deacetylase ALIDE_RS03740 PF01522 Polysaccharide deacetylase ALIDE_RS03745 PF13480 Acetyltransferase (GNAT) domain ALIDE_RS03750 PF00535 Glycosyl transferase family 2 ALIDE_RS03755 PF13440 ALIDE_RS03755 ALIDE_RS03760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALIDE_RS03760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALIDE_RS03760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALIDE_RS03765 PF16363 ALIDE_RS03765 ALIDE_RS03780 PF13480 Acetyltransferase (GNAT) domain ALIDE_RS03785 PF07589 ALIDE_RS03785 ALIDE_RS03785 PF13448 ALIDE_RS03785 ALIDE_RS03790 PF12697 Alpha/beta hydrolase family ALIDE_RS03795 PF12146 Putative lysophospholipase ALIDE_RS03800 PF00550 Phosphopantetheine attachment site ALIDE_RS03805 PF00501 AMP-binding enzyme ALIDE_RS03805 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS03810 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ALIDE_RS03810 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALIDE_RS03815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS03820 PF00072 Response regulator receiver domain ALIDE_RS03820 PF00158 Sigma-54 interaction domain ALIDE_RS03820 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS03825 PF13432 Tetratricopeptide repeat ALIDE_RS03825 PF14559 Tetratricopeptide repeat ALIDE_RS03830 PF13365 Trypsin-like peptidase domain ALIDE_RS03835 PF01176 Translation initiation factor 1A / IF-1 ALIDE_RS03840 PF13532 2OG-Fe(II) oxygenase superfamily ALIDE_RS03845 PF00501 AMP-binding enzyme ALIDE_RS03845 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS03850 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS03850 PF00970 Oxidoreductase FAD-binding domain ALIDE_RS03860 PF01471 Putative peptidoglycan binding domain ALIDE_RS03860 PF13539 D-alanyl-D-alanine carboxypeptidase ALIDE_RS03865 PF01323 DSBA-like thioredoxin domain ALIDE_RS03870 PF05981 ALIDE_RS03870 ALIDE_RS03875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS03875 PF02875 Mur ligase family, glutamate ligase domain ALIDE_RS03875 PF08245 Mur ligase middle domain ALIDE_RS03880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS03885 PF00005 ABC transporter ALIDE_RS03885 PF00664 ABC transporter transmembrane region ALIDE_RS03890 PF08909 ALIDE_RS03890 ALIDE_RS03900 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS03900 PF00679 Elongation factor G C-terminus ALIDE_RS03900 PF03764 Elongation factor G, domain IV ALIDE_RS03900 PF14492 Elongation Factor G, domain II ALIDE_RS03905 PF06189 ALIDE_RS03905 ALIDE_RS03910 PF00482 Type II secretion system (T2SS), protein F ALIDE_RS03915 PF00296 Luciferase-like monooxygenase ALIDE_RS03920 PF13682 Chemoreceptor zinc-binding domain ALIDE_RS03925 PF00437 Type II/IV secretion system protein ALIDE_RS03930 PF00263 ALIDE_RS03930 ALIDE_RS03930 PF03958 Bacterial type II/III secretion system short domain ALIDE_RS03935 PF01203 ALIDE_RS03935 ALIDE_RS03940 PF04612 Type II secretion system (T2SS), protein M ALIDE_RS03945 PF05134 Type II secretion system (T2SS), protein L ALIDE_RS03945 PF12693 GspL periplasmic domain ALIDE_RS03950 PF03934 Type II secretion system (T2SS), protein K ALIDE_RS03955 PF13633 Prokaryotic N-terminal methylation site ALIDE_RS03960 PF02501 Type II secretion system (T2SS), protein I ALIDE_RS03960 PF13633 Prokaryotic N-terminal methylation site ALIDE_RS03965 PF13633 Prokaryotic N-terminal methylation site ALIDE_RS03970 PF08334 Type II secretion system (T2SS), protein G ALIDE_RS03970 PF13544 ALIDE_RS03970 ALIDE_RS03975 PF11356 Type IV pilus biogenesis ALIDE_RS03980 PF00300 Histidine phosphatase superfamily (branch 1) ALIDE_RS03985 PF02654 ALIDE_RS03985 ALIDE_RS03990 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS03990 PF00585 C-terminal regulatory domain of Threonine dehydratase ALIDE_RS03995 PF02566 OsmC-like protein ALIDE_RS04000 PF03232 ALIDE_RS04000 ALIDE_RS04005 PF13609 Gram-negative porin ALIDE_RS04010 PF13609 Gram-negative porin ALIDE_RS04015 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04020 PF01546 Peptidase family M20/M25/M40 ALIDE_RS04020 PF07687 Peptidase dimerisation domain ALIDE_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04025 PF12911 ALIDE_RS04025 ALIDE_RS04030 PF00005 ABC transporter ALIDE_RS04030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE_RS04035 PF00005 ABC transporter ALIDE_RS04035 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE_RS04040 PF01161 Phosphatidylethanolamine-binding protein ALIDE_RS04045 PF01380 SIS domain ALIDE_RS04045 PF01418 Helix-turn-helix domain, rpiR family ALIDE_RS04050 PF00923 Transaldolase ALIDE_RS04055 PF00342 Phosphoglucose isomerase ALIDE_RS04060 PF00118 TCP-1/cpn60 chaperonin family ALIDE_RS04065 PF00166 Chaperonin 10 Kd subunit ALIDE_RS04070 PF00293 NUDIX domain ALIDE_RS04070 PF01467 Cytidylyltransferase ALIDE_RS04075 PF00438 S-adenosylmethionine synthetase, N-terminal domain ALIDE_RS04075 PF02772 S-adenosylmethionine synthetase, central domain ALIDE_RS04075 PF02773 S-adenosylmethionine synthetase, C-terminal domain ALIDE_RS04080 PF03279 ALIDE_RS04080 ALIDE_RS04085 PF03279 ALIDE_RS04085 ALIDE_RS04090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS04090 PF03466 LysR substrate binding domain ALIDE_RS04095 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS04100 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS04105 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE_RS04110 PF04909 Amidohydrolase ALIDE_RS04115 PF01926 50S ribosome-binding GTPase ALIDE_RS04120 PF00034 Cytochrome c ALIDE_RS04125 PF05140 ALIDE_RS04125 ALIDE_RS04130 PF01578 ALIDE_RS04130 ALIDE_RS04135 PF00174 Oxidoreductase molybdopterin binding domain ALIDE_RS04140 PF01794 ALIDE_RS04140 ALIDE_RS04145 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS04150 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ALIDE_RS04150 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALIDE_RS04155 PF01491 Frataxin-like domain ALIDE_RS04160 PF00905 Penicillin binding protein transpeptidase domain ALIDE_RS04160 PF00912 Transglycosylase ALIDE_RS04160 PF17092 ALIDE_RS04160 ALIDE_RS04165 PF11104 Type IV pilus assembly protein PilM; ALIDE_RS04170 PF05137 ALIDE_RS04170 ALIDE_RS04175 PF04350 Pilus assembly protein, PilO ALIDE_RS04180 PF04351 Pilus assembly protein, PilP ALIDE_RS04185 PF00263 ALIDE_RS04185 ALIDE_RS04185 PF03958 Bacterial type II/III secretion system short domain ALIDE_RS04185 PF11741 AMIN domain ALIDE_RS04190 PF05345 Putative Ig domain ALIDE_RS04195 PF01761 3-dehydroquinate synthase ALIDE_RS04200 PF01966 HD domain ALIDE_RS04200 PF13286 Phosphohydrolase-associated domain ALIDE_RS04205 PF07209 ALIDE_RS04205 ALIDE_RS04210 PF13679 ALIDE_RS04210 ALIDE_RS04215 PF00171 Aldehyde dehydrogenase family ALIDE_RS04220 PF13458 Periplasmic binding protein ALIDE_RS04225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS04225 PF03466 LysR substrate binding domain ALIDE_RS04230 PF01797 Transposase IS200 like ALIDE_RS04235 PF00310 Glutamine amidotransferases class-II ALIDE_RS04235 PF01493 GXGXG motif ALIDE_RS04235 PF01645 Conserved region in glutamate synthase ALIDE_RS04235 PF04898 Glutamate synthase central domain ALIDE_RS04240 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS04240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ALIDE_RS04245 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS04250 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04255 PF00005 ABC transporter ALIDE_RS04260 PF11902 ALIDE_RS04260 ALIDE_RS04265 PF01564 Spermine/spermidine synthase ALIDE_RS04270 PF02675 S-adenosylmethionine decarboxylase ALIDE_RS04275 PF00005 ABC transporter ALIDE_RS04280 PF02405 ALIDE_RS04280 ALIDE_RS04285 PF02470 ALIDE_RS04285 ALIDE_RS04290 PF04333 ALIDE_RS04290 ALIDE_RS04295 PF05494 Toluene tolerance, Ttg2 ALIDE_RS04300 PF13466 STAS domain ALIDE_RS04305 PF00990 GGDEF domain ALIDE_RS04305 PF08448 PAS fold ALIDE_RS04310 PF00005 ABC transporter ALIDE_RS04315 PF01061 ALIDE_RS04315 ALIDE_RS04320 PF01722 BolA-like protein ALIDE_RS04325 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALIDE_RS04330 PF01634 ATP phosphoribosyltransferase ALIDE_RS04335 PF00815 Histidinol dehydrogenase ALIDE_RS04345 PF01850 PIN domain ALIDE_RS04350 PF00155 Aminotransferase class I and II ALIDE_RS04355 PF00475 Imidazoleglycerol-phosphate dehydratase ALIDE_RS04360 PF00117 Glutamine amidotransferase class-I ALIDE_RS04365 PF00977 Histidine biosynthesis protein ALIDE_RS04370 PF12138 ALIDE_RS04370 ALIDE_RS04375 PF16933 ALIDE_RS04375 ALIDE_RS04380 PF00534 Glycosyl transferases group 1 ALIDE_RS04380 PF11997 ALIDE_RS04380 ALIDE_RS04390 PF16963 ALIDE_RS04390 ALIDE_RS04400 PF13429 Tetratricopeptide repeat ALIDE_RS04400 PF14559 Tetratricopeptide repeat ALIDE_RS04405 PF03537 Glycoside-hydrolase family GH114 ALIDE_RS04410 PF16363 ALIDE_RS04410 ALIDE_RS04415 PF00977 Histidine biosynthesis protein ALIDE_RS04420 PF01502 Phosphoribosyl-AMP cyclohydrolase ALIDE_RS04425 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ALIDE_RS04435 PF01734 Patatin-like phospholipase ALIDE_RS04440 PF11969 Scavenger mRNA decapping enzyme C-term binding ALIDE_RS04445 PF02416 mttA/Hcf106 family ALIDE_RS04450 PF02416 mttA/Hcf106 family ALIDE_RS04455 PF00902 Sec-independent protein translocase protein (TatC) ALIDE_RS04460 PF13180 PDZ domain ALIDE_RS04460 PF13365 Trypsin-like peptidase domain ALIDE_RS04465 PF01784 NIF3 (NGG1p interacting factor 3) ALIDE_RS04470 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ALIDE_RS04475 PF01741 Large-conductance mechanosensitive channel, MscL ALIDE_RS04480 PF00355 Rieske [2Fe-2S] domain ALIDE_RS04480 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ALIDE_RS04485 PF00032 Cytochrome b(C-terminal)/b6/petD ALIDE_RS04485 PF00033 Cytochrome b(N-terminal)/b6/petB ALIDE_RS04490 PF02167 Cytochrome C1 family ALIDE_RS04495 PF00043 Glutathione S-transferase, C-terminal domain ALIDE_RS04495 PF13417 Glutathione S-transferase, N-terminal domain ALIDE_RS04500 PF04386 Stringent starvation protein B ALIDE_RS04515 PF01043 SecA preprotein cross-linking domain ALIDE_RS04515 PF02810 SEC-C motif ALIDE_RS04515 PF07516 SecA Wing and Scaffold domain ALIDE_RS04515 PF07517 SecA DEAD-like domain ALIDE_RS04520 PF01960 ArgJ family ALIDE_RS04525 PF05673 Protein of unknown function (DUF815) ALIDE_RS04530 PF00293 NUDIX domain ALIDE_RS04535 PF03884 Domain of unknown function (DUF329) ALIDE_RS04540 PF07072 Protein of unknown function (DUF1342) ALIDE_RS04545 PF01121 Dephospho-CoA kinase ALIDE_RS04550 PF01478 Type IV leader peptidase family ALIDE_RS04550 PF06750 ALIDE_RS04550 ALIDE_RS04555 PF00482 Type II secretion system (T2SS), protein F ALIDE_RS04560 PF00437 Type II/IV secretion system protein ALIDE_RS04560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ALIDE_RS04575 PF00665 Integrase core domain ALIDE_RS04575 PF13276 ALIDE_RS04575 ALIDE_RS04580 PF01527 Transposase ALIDE_RS04585 PF00589 Phage integrase family ALIDE_RS04595 PF00348 Polyprenyl synthetase ALIDE_RS04600 PF00829 Ribosomal prokaryotic L21 protein ALIDE_RS04605 PF01016 Ribosomal L27 protein ALIDE_RS04610 PF01018 GTP1/OBG ALIDE_RS04610 PF01926 50S ribosome-binding GTPase ALIDE_RS04615 PF00696 Amino acid kinase family ALIDE_RS04615 PF01472 PUA domain ALIDE_RS04620 PF00293 NUDIX domain ALIDE_RS04625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALIDE_RS04625 PF03129 Anticodon binding domain ALIDE_RS04625 PF04073 Aminoacyl-tRNA editing domain ALIDE_RS04630 PF01464 Transglycosylase SLT domain ALIDE_RS04635 PF00571 CBS domain ALIDE_RS04635 PF01595 ALIDE_RS04635 ALIDE_RS04635 PF03471 Transporter associated domain ALIDE_RS04640 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS04645 PF00462 Glutaredoxin ALIDE_RS04650 PF05175 Methyltransferase small domain ALIDE_RS04655 PF00472 RF-1 domain ALIDE_RS04655 PF03462 PCRF domain ALIDE_RS04660 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ALIDE_RS04660 PF01488 Shikimate / quinate 5-dehydrogenase ALIDE_RS04660 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ALIDE_RS04670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS04670 PF03466 LysR substrate binding domain ALIDE_RS04675 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS04680 PF05013 N-formylglutamate amidohydrolase ALIDE_RS04685 PF00924 Mechanosensitive ion channel ALIDE_RS04685 PF12607 ALIDE_RS04685 ALIDE_RS04690 PF03009 Glycerophosphoryl diester phosphodiesterase family ALIDE_RS04695 PF00005 ABC transporter ALIDE_RS04695 PF08402 TOBE domain ALIDE_RS04700 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04705 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04710 PF13416 Bacterial extracellular solute-binding protein ALIDE_RS04715 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE_RS04715 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS04720 PF01565 FAD binding domain ALIDE_RS04720 PF02754 ALIDE_RS04720 ALIDE_RS04720 PF02913 FAD linked oxidases, C-terminal domain ALIDE_RS04720 PF11880 ALIDE_RS04720 ALIDE_RS04720 PF12447 ALIDE_RS04720 ALIDE_RS04720 PF13183 4Fe-4S dicluster domain ALIDE_RS04725 PF01230 HIT domain ALIDE_RS04730 PF06155 Protein of unknown function (DUF971) ALIDE_RS04735 PF01209 ubiE/COQ5 methyltransferase family ALIDE_RS04740 PF04280 Tim44-like domain ALIDE_RS04750 PF03109 ALIDE_RS04750 ALIDE_RS04755 PF00474 Sodium:solute symporter family ALIDE_RS04765 PF04367 ALIDE_RS04765 ALIDE_RS04770 PF00152 tRNA synthetases class II (D, K and N) ALIDE_RS04770 PF01336 OB-fold nucleic acid binding domain ALIDE_RS04770 PF02938 GAD domain ALIDE_RS04775 PF00293 NUDIX domain ALIDE_RS04780 PF03372 Endonuclease/Exonuclease/phosphatase family ALIDE_RS04785 PF13091 PLD-like domain ALIDE_RS04790 PF01227 GTP cyclohydrolase I ALIDE_RS04795 PF04940 Sensors of blue-light using FAD ALIDE_RS04800 PF00892 EamA-like transporter family ALIDE_RS04805 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS04805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS04805 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein ALIDE_RS04810 PF00072 Response regulator receiver domain ALIDE_RS04810 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS04815 PF00034 Cytochrome c ALIDE_RS04830 PF01810 ALIDE_RS04830 ALIDE_RS04835 PF01425 Amidase ALIDE_RS04840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE_RS04845 PF00005 ABC transporter ALIDE_RS04845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE_RS04850 PF00005 ABC transporter ALIDE_RS04850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE_RS04855 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04860 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04865 PF13237 4Fe-4S dicluster domain ALIDE_RS04870 PF01195 Peptidyl-tRNA hydrolase ALIDE_RS04875 PF01386 Ribosomal L25p family ALIDE_RS04875 PF14693 Ribosomal protein TL5, C-terminal domain ALIDE_RS04880 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ALIDE_RS04880 PF14572 Phosphoribosyl synthetase-associated domain ALIDE_RS04890 PF00288 GHMP kinases N terminal domain ALIDE_RS04890 PF08544 GHMP kinases C terminal ALIDE_RS04895 PF03550 Outer membrane lipoprotein LolB ALIDE_RS04900 PF13432 Tetratricopeptide repeat ALIDE_RS04900 PF14559 Tetratricopeptide repeat ALIDE_RS04905 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ALIDE_RS04905 PF06827 Zinc finger found in FPG and IleRS ALIDE_RS04905 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ALIDE_RS04910 PF00350 Dynamin family ALIDE_RS04915 PF00633 Helix-hairpin-helix motif ALIDE_RS04915 PF00730 HhH-GPD superfamily base excision DNA repair protein ALIDE_RS04915 PF14815 NUDIX domain ALIDE_RS04920 PF03668 ALIDE_RS04920 ALIDE_RS04925 PF02463 RecF/RecN/SMC N terminal domain ALIDE_RS04930 PF01513 ATP-NAD kinase ALIDE_RS04935 PF01628 HrcA protein C terminal domain ALIDE_RS04935 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ALIDE_RS04940 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS04945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE_RS04945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS04950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS04950 PF03466 LysR substrate binding domain ALIDE_RS04955 PF00155 Aminotransferase class I and II ALIDE_RS04960 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04965 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS04970 PF00005 ABC transporter ALIDE_RS04975 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS04980 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS04985 PF01177 Asp/Glu/Hydantoin racemase ALIDE_RS04995 PF02682 Allophanate hydrolase subunit 1 ALIDE_RS05000 PF02626 Allophanate hydrolase subunit 2 ALIDE_RS05005 PF03746 LamB/YcsF family ALIDE_RS05010 PF00364 Biotin-requiring enzyme ALIDE_RS05015 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS05015 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS05015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS05020 PF05036 Sporulation related domain ALIDE_RS05025 PF11720 Peptidase inhibitor I78 family ALIDE_RS05030 PF04055 Radical SAM superfamily ALIDE_RS05030 PF06969 HemN C-terminal domain ALIDE_RS05035 PF01725 Ham1 family ALIDE_RS05040 PF01138 3' exoribonuclease family, domain 1 ALIDE_RS05040 PF03725 3' exoribonuclease family, domain 2 ALIDE_RS05045 PF13672 Protein phosphatase 2C ALIDE_RS05050 PF00069 Protein kinase domain ALIDE_RS05055 PF03755 ALIDE_RS05055 ALIDE_RS05055 PF08340 ALIDE_RS05055 ALIDE_RS05060 PF14870 Photosynthesis system II assembly factor YCF48 ALIDE_RS05075 PF04865 ALIDE_RS05075 ALIDE_RS05080 PF04965 Gene 25-like lysozyme ALIDE_RS05110 PF13699 ALIDE_RS05110 ALIDE_RS05120 PF13699 ALIDE_RS05120 ALIDE_RS05125 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS05130 PF14065 ALIDE_RS05130 ALIDE_RS05140 PF06841 ALIDE_RS05140 ALIDE_RS05145 PF04984 Phage tail sheath protein ALIDE_RS05150 PF00625 Guanylate kinase ALIDE_RS05155 PF01192 RNA polymerase Rpb6 ALIDE_RS05160 PF02824 TGS domain ALIDE_RS05160 PF04607 Region found in RelA / SpoT proteins ALIDE_RS05160 PF13291 ACT domain ALIDE_RS05160 PF13328 HD domain ALIDE_RS05165 PF01272 Transcription elongation factor, GreA/GreB, C-term ALIDE_RS05165 PF03449 Transcription elongation factor, N-terminal ALIDE_RS05180 PF00312 Ribosomal protein S15 ALIDE_RS05185 PF00013 KH domain ALIDE_RS05185 PF00575 S1 RNA binding domain ALIDE_RS05185 PF01138 3' exoribonuclease family, domain 1 ALIDE_RS05185 PF03725 3' exoribonuclease family, domain 2 ALIDE_RS05185 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ALIDE_RS05190 PF00107 Zinc-binding dehydrogenase ALIDE_RS05190 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS05195 PF00121 Triosephosphate isomerase ALIDE_RS05200 PF03840 Preprotein translocase SecG subunit ALIDE_RS05210 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ALIDE_RS05215 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ALIDE_RS05220 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ALIDE_RS05225 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ALIDE_RS05230 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin ALIDE_RS05235 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ALIDE_RS05235 PF10531 SLBB domain ALIDE_RS05235 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ALIDE_RS05240 PF00384 Molybdopterin oxidoreductase ALIDE_RS05240 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ALIDE_RS05240 PF13510 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS05245 PF00146 NADH dehydrogenase ALIDE_RS05250 PF12838 4Fe-4S dicluster domain ALIDE_RS05255 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ALIDE_RS05260 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ALIDE_RS05265 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ALIDE_RS05265 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ALIDE_RS05270 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ALIDE_RS05275 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ALIDE_RS05280 PF10993 ALIDE_RS05280 ALIDE_RS05285 PF06676 ALIDE_RS05285 ALIDE_RS05295 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALIDE_RS05295 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALIDE_RS05300 PF01119 DNA mismatch repair protein, C-terminal domain ALIDE_RS05300 PF08676 MutL C terminal dimerisation domain ALIDE_RS05300 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS05305 PF05433 ALIDE_RS05305 ALIDE_RS05310 PF09335 ALIDE_RS05310 ALIDE_RS05315 PF01979 Amidohydrolase family ALIDE_RS05320 PF00860 Permease family ALIDE_RS05325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS05325 PF03466 LysR substrate binding domain ALIDE_RS05330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ALIDE_RS05330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ALIDE_RS05335 PF00941 FAD binding domain in molybdopterin dehydrogenase ALIDE_RS05335 PF01799 [2Fe-2S] binding domain ALIDE_RS05335 PF03450 CO dehydrogenase flavoprotein C-terminal domain ALIDE_RS05340 PF07883 Cupin domain ALIDE_RS05345 PF01520 N-acetylmuramoyl-L-alanine amidase ALIDE_RS05345 PF11741 AMIN domain ALIDE_RS05350 PF02367 Uncharacterised P-loop hydrolase UPF0079 ALIDE_RS05355 PF08331 ALIDE_RS05355 ALIDE_RS05355 PF13484 ALIDE_RS05355 ALIDE_RS05360 PF03547 ALIDE_RS05360 ALIDE_RS05365 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS05370 PF00589 Phage integrase family ALIDE_RS05370 PF02899 Phage integrase, N-terminal SAM-like domain ALIDE_RS05380 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS05385 PF00563 EAL domain ALIDE_RS05385 PF08668 HDOD domain ALIDE_RS05390 PF00563 EAL domain ALIDE_RS05390 PF08668 HDOD domain ALIDE_RS05395 PF04305 ALIDE_RS05395 ALIDE_RS05400 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE_RS05405 PF01430 Hsp33 protein ALIDE_RS05410 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS05415 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS05420 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS05425 PF00005 ABC transporter ALIDE_RS05430 PF04977 Septum formation initiator ALIDE_RS05435 PF00113 Enolase, C-terminal TIM barrel domain ALIDE_RS05435 PF03952 Enolase, N-terminal domain ALIDE_RS05440 PF07045 Protein of unknown function (DUF1330) ALIDE_RS05445 PF00793 DAHP synthetase I family ALIDE_RS05450 PF00117 Glutamine amidotransferase class-I ALIDE_RS05450 PF06418 CTP synthase N-terminus ALIDE_RS05455 PF02441 Flavoprotein ALIDE_RS05455 PF04127 DNA / pantothenate metabolism flavoprotein ALIDE_RS05465 PF00692 dUTPase ALIDE_RS05475 PF08007 Cupin superfamily protein ALIDE_RS05490 PF06804 NlpB/DapX lipoprotein ALIDE_RS05495 PF00701 Dihydrodipicolinate synthetase family ALIDE_RS05500 PF13489 Methyltransferase domain ALIDE_RS05505 PF07690 Major Facilitator Superfamily ALIDE_RS05510 PF00204 DNA gyrase B ALIDE_RS05510 PF00986 DNA gyrase B subunit, carboxyl terminus ALIDE_RS05510 PF01751 Toprim domain ALIDE_RS05510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS05515 PF00521 DNA gyrase/topoisomerase IV, subunit A ALIDE_RS05515 PF03989 DNA gyrase C-terminal domain, beta-propeller ALIDE_RS05520 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease ALIDE_RS05525 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS05525 PF03772 ALIDE_RS05525 ALIDE_RS05525 PF13567 ALIDE_RS05525 ALIDE_RS05530 PF00171 Aldehyde dehydrogenase family ALIDE_RS05535 PF00581 Rhodanese-like domain ALIDE_RS05545 PF00355 Rieske [2Fe-2S] domain ALIDE_RS05545 PF00848 Ring hydroxylating alpha subunit (catalytic domain) ALIDE_RS05550 PF02609 Exonuclease VII small subunit ALIDE_RS05555 PF00348 Polyprenyl synthetase ALIDE_RS05560 PF02779 Transketolase, pyrimidine binding domain ALIDE_RS05560 PF02780 Transketolase, C-terminal domain ALIDE_RS05560 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ALIDE_RS05565 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE_RS05570 PF00270 DEAD/DEAH box helicase ALIDE_RS05570 PF00271 Helicase conserved C-terminal domain ALIDE_RS05570 PF06224 ALIDE_RS05570 ALIDE_RS05570 PF08494 ALIDE_RS05570 ALIDE_RS05575 PF06808 ALIDE_RS05575 ALIDE_RS05580 PF04290 ALIDE_RS05580 ALIDE_RS05585 PF00459 Inositol monophosphatase family ALIDE_RS05590 PF00588 SpoU rRNA Methylase family ALIDE_RS05595 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE_RS05600 PF00881 Nitroreductase family ALIDE_RS05605 PF00107 Zinc-binding dehydrogenase ALIDE_RS05605 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS05610 PF00994 Probable molybdopterin binding domain ALIDE_RS05615 PF04751 Protein of unknown function (DUF615) ALIDE_RS05620 PF01523 Putative modulator of DNA gyrase ALIDE_RS05655 PF00717 Peptidase S24-like ALIDE_RS05660 PF01527 Transposase ALIDE_RS05670 PF05099 Tellurite resistance protein TerB ALIDE_RS05670 PF13208 ALIDE_RS05670 ALIDE_RS05670 PF15615 ALIDE_RS05670 ALIDE_RS05675 PF10923 ALIDE_RS05675 ALIDE_RS05680 PF00270 DEAD/DEAH box helicase ALIDE_RS05680 PF00271 Helicase conserved C-terminal domain ALIDE_RS05685 PF05681 ALIDE_RS05685 ALIDE_RS05685 PF05683 Fumarase C-terminus ALIDE_RS05690 PF00206 Lyase ALIDE_RS05690 PF10415 Fumarase C C-terminus ALIDE_RS05695 PF00027 Cyclic nucleotide-binding domain ALIDE_RS05695 PF13545 Crp-like helix-turn-helix domain ALIDE_RS05700 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ALIDE_RS05705 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS05710 PF00005 ABC transporter ALIDE_RS05710 PF00571 CBS domain ALIDE_RS05715 PF00501 AMP-binding enzyme ALIDE_RS05715 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS05715 PF16177 ALIDE_RS05715 ALIDE_RS05720 PF00092 von Willebrand factor type A domain ALIDE_RS05720 PF07584 ALIDE_RS05720 ALIDE_RS05720 PF13519 von Willebrand factor type A domain ALIDE_RS05725 PF01882 ALIDE_RS05725 ALIDE_RS05730 PF07726 ATPase family associated with various cellular activities (AAA) ALIDE_RS05735 PF13365 Trypsin-like peptidase domain ALIDE_RS05740 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS05745 PF01022 Bacterial regulatory protein, arsR family ALIDE_RS05750 PF11127 Protein of unknown function (DUF2892) ALIDE_RS05755 PF01026 TatD related DNase ALIDE_RS05760 PF03167 Uracil DNA glycosylase superfamily ALIDE_RS05770 PF00437 Type II/IV secretion system protein ALIDE_RS05770 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ALIDE_RS05775 PF07331 ALIDE_RS05775 ALIDE_RS05780 PF01970 ALIDE_RS05780 ALIDE_RS05785 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS05790 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE_RS05795 PF00563 EAL domain ALIDE_RS05795 PF00990 GGDEF domain ALIDE_RS05795 PF12860 ALIDE_RS05795 ALIDE_RS05800 PF00892 EamA-like transporter family ALIDE_RS05805 PF00107 Zinc-binding dehydrogenase ALIDE_RS05805 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS05810 PF00293 NUDIX domain ALIDE_RS05815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS05815 PF03466 LysR substrate binding domain ALIDE_RS05820 PF13593 SBF-like CPA transporter family (DUF4137) ALIDE_RS05825 PF01895 PhoU domain ALIDE_RS05825 PF02690 ALIDE_RS05825 ALIDE_RS05830 PF00149 Calcineurin-like phosphoesterase ALIDE_RS05835 PF00005 ABC transporter ALIDE_RS05835 PF08402 TOBE domain ALIDE_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS05850 PF13343 Bacterial extracellular solute-binding protein ALIDE_RS05855 PF00356 Bacterial regulatory proteins, lacI family ALIDE_RS05855 PF13377 Periplasmic binding protein-like domain ALIDE_RS05860 PF01252 ALIDE_RS05860 ALIDE_RS05865 PF00133 tRNA synthetases class I (I, L, M and V) ALIDE_RS05865 PF06827 Zinc finger found in FPG and IleRS ALIDE_RS05865 PF08264 Anticodon-binding domain of tRNA ALIDE_RS05870 PF01687 Riboflavin kinase ALIDE_RS05870 PF06574 FAD synthetase ALIDE_RS05875 PF14279 ALIDE_RS05875 ALIDE_RS05880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS05880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS05885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS05885 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS05885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS05890 PF04337 Protein of unknown function, DUF480 ALIDE_RS05895 PF00551 Formyl transferase ALIDE_RS05900 PF01189 NOL1/NOP2/sun family ALIDE_RS05900 PF17125 ALIDE_RS05900 ALIDE_RS05905 PF00471 Ribosomal protein L33 ALIDE_RS05910 PF00830 Ribosomal L28 family ALIDE_RS05915 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS05920 PF01580 FtsK/SpoIIIE family ALIDE_RS05920 PF09397 Ftsk gamma domain ALIDE_RS05920 PF13491 ALIDE_RS05920 ALIDE_RS05925 PF03548 Outer membrane lipoprotein carrier protein LolA ALIDE_RS05930 PF01040 UbiA prenyltransferase family ALIDE_RS05935 PF03167 Uracil DNA glycosylase superfamily ALIDE_RS05940 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS05940 PF12002 MgsA AAA+ ATPase C terminal ALIDE_RS05940 PF16193 ALIDE_RS05940 ALIDE_RS05945 PF02653 ALIDE_RS05945 ALIDE_RS05950 PF02653 ALIDE_RS05950 ALIDE_RS05955 PF00005 ABC transporter ALIDE_RS05955 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS05960 PF00005 ABC transporter ALIDE_RS05965 PF04342 ALIDE_RS05965 ALIDE_RS05970 PF13505 Outer membrane protein beta-barrel domain ALIDE_RS05975 PF01865 Protein of unknown function DUF47 ALIDE_RS05980 PF01384 ALIDE_RS05980 ALIDE_RS05990 PF13420 Acetyltransferase (GNAT) domain ALIDE_RS05995 PF00886 Ribosomal protein S16 ALIDE_RS06000 PF01782 RimM N-terminal domain ALIDE_RS06000 PF05239 PRC-barrel domain ALIDE_RS06005 PF01746 tRNA (Guanine-1)-methyltransferase ALIDE_RS06010 PF01245 Ribosomal protein L19 ALIDE_RS06015 PF00293 NUDIX domain ALIDE_RS06020 PF03186 ALIDE_RS06020 ALIDE_RS06025 PF00155 Aminotransferase class I and II ALIDE_RS06030 PF00916 ALIDE_RS06030 ALIDE_RS06030 PF01740 STAS domain ALIDE_RS06035 PF03193 Protein of unknown function, DUF258 ALIDE_RS06040 PF01329 Pterin 4 alpha carbinolamine dehydratase ALIDE_RS06045 PF01435 Peptidase family M48 ALIDE_RS06045 PF16491 ALIDE_RS06045 ALIDE_RS06050 PF00929 Exonuclease ALIDE_RS06055 PF13458 Periplasmic binding protein ALIDE_RS06060 PF00270 DEAD/DEAH box helicase ALIDE_RS06060 PF00271 Helicase conserved C-terminal domain ALIDE_RS06065 PF00990 GGDEF domain ALIDE_RS06065 PF13188 PAS domain ALIDE_RS06070 PF07690 Major Facilitator Superfamily ALIDE_RS06075 PF04314 Protein of unknown function (DUF461) ALIDE_RS06085 PF00027 Cyclic nucleotide-binding domain ALIDE_RS06085 PF13545 Crp-like helix-turn-helix domain ALIDE_RS06090 PF00593 TonB dependent receptor ALIDE_RS06090 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS06095 PF02621 Menaquinone biosynthesis ALIDE_RS06100 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS06105 PF00005 ABC transporter ALIDE_RS06110 PF05940 ALIDE_RS06110 ALIDE_RS06115 PF00593 TonB dependent receptor ALIDE_RS06115 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS06120 PF02514 ALIDE_RS06120 ALIDE_RS06135 PF01618 ALIDE_RS06135 ALIDE_RS06140 PF09919 ALIDE_RS06140 ALIDE_RS06145 PF00589 Phage integrase family ALIDE_RS06150 PF13986 ALIDE_RS06150 ALIDE_RS06195 PF05840 ALIDE_RS06195 ALIDE_RS06210 PF04606 ALIDE_RS06210 ALIDE_RS06230 PF00717 Peptidase S24-like ALIDE_RS06235 PF13280 ALIDE_RS06235 ALIDE_RS06245 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS06245 PF10387 Protein of unknown function (DUF2442) ALIDE_RS06250 PF13711 ALIDE_RS06250 ALIDE_RS06255 PF05954 Phage late control gene D protein (GPD) ALIDE_RS06260 PF06995 ALIDE_RS06260 ALIDE_RS06265 PF10145 ALIDE_RS06265 ALIDE_RS06280 PF10109 ALIDE_RS06280 ALIDE_RS06285 PF04985 ALIDE_RS06285 ALIDE_RS06290 PF04984 Phage tail sheath protein ALIDE_RS06310 PF05593 ALIDE_RS06310 ALIDE_RS06320 PF09684 ALIDE_RS06320 ALIDE_RS06325 PF04865 ALIDE_RS06325 ALIDE_RS06330 PF04965 Gene 25-like lysozyme ALIDE_RS06335 PF04717 Phage-related baseplate assembly protein ALIDE_RS06340 PF05069 ALIDE_RS06340 ALIDE_RS06345 PF06891 ALIDE_RS06345 ALIDE_RS06350 PF10721 ALIDE_RS06350 ALIDE_RS06355 PF00959 Phage lysozyme ALIDE_RS06365 PF05489 Phage Tail Protein X ALIDE_RS06370 PF05926 ALIDE_RS06370 ALIDE_RS06375 PF05944 ALIDE_RS06375 ALIDE_RS06380 PF05125 ALIDE_RS06380 ALIDE_RS06385 PF05929 ALIDE_RS06385 ALIDE_RS06390 PF03237 Terminase-like family ALIDE_RS06390 PF06056 Putative ATPase subunit of terminase (gpP-like) ALIDE_RS06395 PF04860 Phage portal protein ALIDE_RS06405 PF00478 IMP dehydrogenase / GMP reductase domain ALIDE_RS06410 PF00580 UvrD/REP helicase N-terminal domain ALIDE_RS06410 PF13361 UvrD-like helicase C-terminal domain ALIDE_RS06415 PF05787 Bacterial protein of unknown function (DUF839) ALIDE_RS06420 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS06420 PF00990 GGDEF domain ALIDE_RS06430 PF01636 Phosphotransferase enzyme family ALIDE_RS06445 PF00476 DNA polymerase family A ALIDE_RS06445 PF01367 5'-3' exonuclease, C-terminal SAM fold ALIDE_RS06445 PF01612 3'-5' exonuclease ALIDE_RS06445 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ALIDE_RS06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS06450 PF03466 LysR substrate binding domain ALIDE_RS06455 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS06460 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS06465 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS06470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS06470 PF03466 LysR substrate binding domain ALIDE_RS06475 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS06480 PF02515 CoA-transferase family III ALIDE_RS06485 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS06490 PF01738 Dienelactone hydrolase family ALIDE_RS06495 PF02535 ALIDE_RS06495 ALIDE_RS06500 PF00072 Response regulator receiver domain ALIDE_RS06500 PF04397 LytTr DNA-binding domain ALIDE_RS06505 PF12710 haloacid dehalogenase-like hydrolase ALIDE_RS06510 PF08125 Mannitol dehydrogenase C-terminal domain ALIDE_RS06510 PF13419 Haloacid dehalogenase-like hydrolase ALIDE_RS06520 PF00270 DEAD/DEAH box helicase ALIDE_RS06520 PF00271 Helicase conserved C-terminal domain ALIDE_RS06520 PF02559 CarD-like/TRCF domain ALIDE_RS06520 PF03461 TRCF domain ALIDE_RS06525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ALIDE_RS06530 PF02542 YgbB family ALIDE_RS06535 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS06535 PF00672 HAMP domain ALIDE_RS06535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS06535 PF16524 ALIDE_RS06535 ALIDE_RS06540 PF00072 Response regulator receiver domain ALIDE_RS06540 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS06545 PF04402 Protein of unknown function (DUF541) ALIDE_RS06550 PF00106 short chain dehydrogenase ALIDE_RS06555 PF12697 Alpha/beta hydrolase family ALIDE_RS06560 PF02824 TGS domain ALIDE_RS06560 PF04607 Region found in RelA / SpoT proteins ALIDE_RS06560 PF13291 ACT domain ALIDE_RS06560 PF13328 HD domain ALIDE_RS06575 PF00076 RNA recognition motif ALIDE_RS06580 PF05233 ALIDE_RS06580 ALIDE_RS06580 PF07879 ALIDE_RS06580 ALIDE_RS06585 PF00919 Uncharacterized protein family UPF0004 ALIDE_RS06585 PF04055 Radical SAM superfamily ALIDE_RS06590 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE_RS06595 PF01638 HxlR-like helix-turn-helix ALIDE_RS06600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS06600 PF03466 LysR substrate binding domain ALIDE_RS06605 PF00682 HMGL-like ALIDE_RS06610 PF02515 CoA-transferase family III ALIDE_RS06615 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS06620 PF02558 Ketopantoate reductase PanE/ApbA ALIDE_RS06620 PF08546 Ketopantoate reductase PanE/ApbA C terminal ALIDE_RS06625 PF03352 Methyladenine glycosylase ALIDE_RS06630 PF00140 Sigma-70 factor, region 1 ALIDE_RS06630 PF03979 Sigma-70 factor, region 1 ALIDE_RS06630 PF04539 Sigma-70 region 3 ALIDE_RS06630 PF04542 Sigma-70 region 2 ALIDE_RS06630 PF04545 Sigma-70, region 4 ALIDE_RS06630 PF04546 Sigma-70, non-essential region ALIDE_RS06635 PF01807 CHC2 zinc finger ALIDE_RS06635 PF08275 DNA primase catalytic core, N-terminal domain ALIDE_RS06635 PF10410 DnaB-helicase binding domain of primase ALIDE_RS06635 PF13662 Toprim domain ALIDE_RS06640 PF00501 AMP-binding enzyme ALIDE_RS06640 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS06645 PF13091 PLD-like domain ALIDE_RS06650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS06650 PF12727 PBP superfamily domain ALIDE_RS06655 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS06660 PF00005 ABC transporter ALIDE_RS06665 PF12849 PBP superfamily domain ALIDE_RS06675 PF00005 ABC transporter ALIDE_RS06675 PF03459 TOBE domain ALIDE_RS06680 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS06685 PF13531 Bacterial extracellular solute-binding protein ALIDE_RS06690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS06690 PF03459 TOBE domain ALIDE_RS06695 PF00005 ABC transporter ALIDE_RS06695 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS06700 PF00005 ABC transporter ALIDE_RS06705 PF13458 Periplasmic binding protein ALIDE_RS06710 PF13458 Periplasmic binding protein ALIDE_RS06715 PF02653 ALIDE_RS06715 ALIDE_RS06720 PF02653 ALIDE_RS06720 ALIDE_RS06725 PF07143 Hydroxyneurosporene synthase (CrtC) ALIDE_RS06725 PF17186 ALIDE_RS06725 ALIDE_RS06730 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS06735 PF02687 ALIDE_RS06735 ALIDE_RS06740 PF00011 Hsp20/alpha crystallin family ALIDE_RS06745 PF00005 ABC transporter ALIDE_RS06750 PF01715 IPP transferase ALIDE_RS06755 PF07690 Major Facilitator Superfamily ALIDE_RS06760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE_RS06760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS06765 PF01230 HIT domain ALIDE_RS06770 PF13609 Gram-negative porin ALIDE_RS06775 PF13545 Crp-like helix-turn-helix domain ALIDE_RS06780 PF00990 GGDEF domain ALIDE_RS06780 PF08447 PAS fold ALIDE_RS06785 PF00005 ABC transporter ALIDE_RS06790 PF02653 ALIDE_RS06790 ALIDE_RS06795 PF02653 ALIDE_RS06795 ALIDE_RS06800 PF02608 Basic membrane protein ALIDE_RS06805 PF02608 Basic membrane protein ALIDE_RS06810 PF01266 FAD dependent oxidoreductase ALIDE_RS06815 PF00005 ABC transporter ALIDE_RS06820 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS06825 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS06830 PF01614 Bacterial transcriptional regulator ALIDE_RS06830 PF09339 IclR helix-turn-helix domain ALIDE_RS06835 PF05899 Protein of unknown function (DUF861) ALIDE_RS06840 PF00962 Adenosine/AMP deaminase ALIDE_RS06845 PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region ALIDE_RS06845 PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal ALIDE_RS06850 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE_RS06855 PF00005 ABC transporter ALIDE_RS06855 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE_RS06860 PF00005 ABC transporter ALIDE_RS06860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE_RS06865 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS06865 PF12911 ALIDE_RS06865 ALIDE_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS06875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS06875 PF03466 LysR substrate binding domain ALIDE_RS06880 PF04199 Putative cyclase ALIDE_RS06885 PF03692 ALIDE_RS06885 ALIDE_RS06890 PF04023 FeoA domain ALIDE_RS06895 PF02421 Ferrous iron transport protein B ALIDE_RS06895 PF07664 ALIDE_RS06895 ALIDE_RS06895 PF07670 Nucleoside recognition ALIDE_RS06905 PF03692 ALIDE_RS06905 ALIDE_RS06910 PF11160 ALIDE_RS06910 ALIDE_RS06915 PF04343 ALIDE_RS06915 ALIDE_RS06920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALIDE_RS06920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALIDE_RS06925 PF00202 Aminotransferase class-III ALIDE_RS06930 PF12112 Protein of unknown function (DUF3579) ALIDE_RS06935 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS06940 PF01649 Ribosomal protein S20 ALIDE_RS06945 PF03023 ALIDE_RS06945 ALIDE_RS06950 PF13369 ALIDE_RS06950 ALIDE_RS06950 PF13371 Tetratricopeptide repeat ALIDE_RS06955 PF00582 Universal stress protein family ALIDE_RS06960 PF01594 ALIDE_RS06960 ALIDE_RS06965 PF00586 AIR synthase related protein, N-terminal domain ALIDE_RS06965 PF02769 AIR synthase related protein, C-terminal domain ALIDE_RS06970 PF01019 Gamma-glutamyltranspeptidase ALIDE_RS06975 PF00308 Bacterial dnaA protein ALIDE_RS06980 PF12710 haloacid dehalogenase-like hydrolase ALIDE_RS06985 PF01743 Poly A polymerase head domain ALIDE_RS06985 PF12626 Polymerase A arginine-rich C-terminus ALIDE_RS06985 PF12627 Probable RNA and SrmB- binding site of polymerase A ALIDE_RS06990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ALIDE_RS06995 PF00535 Glycosyl transferase family 2 ALIDE_RS07000 PF13231 ALIDE_RS07000 ALIDE_RS07005 PF04138 ALIDE_RS07005 ALIDE_RS07010 PF04794 YdjC-like protein ALIDE_RS07015 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS07020 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS07025 PF01208 Uroporphyrinogen decarboxylase (URO-D) ALIDE_RS07030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS07030 PF03466 LysR substrate binding domain ALIDE_RS07035 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS07040 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS07040 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS07040 PF00970 Oxidoreductase FAD-binding domain ALIDE_RS07045 PF01370 NAD dependent epimerase/dehydratase family ALIDE_RS07050 PF13511 ALIDE_RS07050 ALIDE_RS07060 PF01609 Transposase DDE domain ALIDE_RS07060 PF05598 ALIDE_RS07060 ALIDE_RS07065 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS07070 PF02515 CoA-transferase family III ALIDE_RS07075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS07075 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS07075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS07080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS07080 PF03466 LysR substrate binding domain ALIDE_RS07085 PF04172 ALIDE_RS07085 ALIDE_RS07105 PF07589 ALIDE_RS07105 ALIDE_RS07110 PF05521 Phage head-tail joining protein ALIDE_RS07115 PF05135 Phage gp6-like head-tail connector protein ALIDE_RS07120 PF03354 ALIDE_RS07120 ALIDE_RS07130 PF01844 HNH endonuclease ALIDE_RS07135 PF04860 Phage portal protein ALIDE_RS07140 PF04586 ALIDE_RS07140 ALIDE_RS07145 PF05065 Phage capsid family ALIDE_RS07155 PF01527 Transposase ALIDE_RS07160 PF00665 Integrase core domain ALIDE_RS07160 PF13276 ALIDE_RS07160 ALIDE_RS07165 PF14090 ALIDE_RS07165 ALIDE_RS07170 PF05930 Prophage CP4-57 regulatory protein (AlpA) ALIDE_RS07180 PF00589 Phage integrase family ALIDE_RS07180 PF13356 Domain of unknown function (DUF4102) ALIDE_RS07190 PF00246 Zinc carboxypeptidase ALIDE_RS07195 PF00270 DEAD/DEAH box helicase ALIDE_RS07195 PF00271 Helicase conserved C-terminal domain ALIDE_RS07200 PF00005 ABC transporter ALIDE_RS07200 PF12848 ABC transporter ALIDE_RS07205 PF16868 ALIDE_RS07205 ALIDE_RS07210 PF03576 Peptidase family S58 ALIDE_RS07215 PF04214 ALIDE_RS07215 ALIDE_RS07220 PF00127 Copper binding proteins, plastocyanin/azurin family ALIDE_RS07230 PF02588 ALIDE_RS07230 ALIDE_RS07235 PF00122 E1-E2 ATPase ALIDE_RS07235 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS07240 PF13411 MerR HTH family regulatory protein ALIDE_RS07245 PF02405 ALIDE_RS07245 ALIDE_RS07250 PF02470 ALIDE_RS07250 ALIDE_RS07260 PF13714 Phosphoenolpyruvate phosphomutase ALIDE_RS07265 PF01256 Carbohydrate kinase ALIDE_RS07265 PF03853 YjeF-related protein N-terminus ALIDE_RS07270 PF01266 FAD dependent oxidoreductase ALIDE_RS07275 PF01425 Amidase ALIDE_RS07280 PF00318 Ribosomal protein S2 ALIDE_RS07285 PF00889 Elongation factor TS ALIDE_RS07290 PF00696 Amino acid kinase family ALIDE_RS07295 PF01765 Ribosome recycling factor ALIDE_RS07300 PF01255 Putative undecaprenyl diphosphate synthase ALIDE_RS07305 PF01148 Cytidylyltransferase family ALIDE_RS07310 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ALIDE_RS07310 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal ALIDE_RS07310 PF13288 DXP reductoisomerase C-terminal domain ALIDE_RS07315 PF02163 Peptidase family M50 ALIDE_RS07320 PF01103 Surface antigen ALIDE_RS07320 PF07244 Surface antigen variable number repeat ALIDE_RS07325 PF03938 Outer membrane protein (OmpH-like) ALIDE_RS07330 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE_RS07330 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ALIDE_RS07330 PF14602 Hexapeptide repeat of succinyl-transferase ALIDE_RS07335 PF07977 FabA-like domain ALIDE_RS07340 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE_RS07340 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ALIDE_RS07345 PF02684 ALIDE_RS07345 ALIDE_RS07350 PF01351 Ribonuclease HII ALIDE_RS07355 PF00588 SpoU rRNA Methylase family ALIDE_RS07360 PF00589 Phage integrase family ALIDE_RS07360 PF13356 Domain of unknown function (DUF4102) ALIDE_RS07365 PF01527 Transposase ALIDE_RS07370 PF00665 Integrase core domain ALIDE_RS07370 PF13276 ALIDE_RS07370 ALIDE_RS07380 PF00316 Fructose-1-6-bisphosphatase ALIDE_RS07385 PF01433 Peptidase family M1 ALIDE_RS07385 PF11940 Domain of unknown function (DUF3458) ALIDE_RS07390 PF00472 RF-1 domain ALIDE_RS07390 PF03462 PCRF domain ALIDE_RS07395 PF16654 ALIDE_RS07395 ALIDE_RS07400 PF00561 alpha/beta hydrolase fold ALIDE_RS07405 PF13343 Bacterial extracellular solute-binding protein ALIDE_RS07410 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS07415 PF00005 ABC transporter ALIDE_RS07415 PF08402 TOBE domain ALIDE_RS07420 PF00248 Aldo/keto reductase family ALIDE_RS07425 PF04073 Aminoacyl-tRNA editing domain ALIDE_RS07430 PF02660 ALIDE_RS07430 ALIDE_RS07440 PF13975 ALIDE_RS07440 ALIDE_RS07445 PF04461 Protein of unknown function (DUF520) ALIDE_RS07450 PF01565 FAD binding domain ALIDE_RS07450 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ALIDE_RS07455 PF03779 ALIDE_RS07455 ALIDE_RS07460 PF02592 ALIDE_RS07460 ALIDE_RS07465 PF06508 Queuosine biosynthesis protein QueC ALIDE_RS07470 PF01968 Hydantoinase/oxoprolinase ALIDE_RS07470 PF05378 ALIDE_RS07470 ALIDE_RS07475 PF02538 ALIDE_RS07475 ALIDE_RS07480 PF08882 ALIDE_RS07480 ALIDE_RS07485 PF00158 Sigma-54 interaction domain ALIDE_RS07485 PF01590 GAF domain ALIDE_RS07485 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS07490 PF00764 Arginosuccinate synthase ALIDE_RS07495 PF06865 Protein of unknown function (DUF1255) ALIDE_RS07500 PF05433 ALIDE_RS07500 ALIDE_RS07505 PF03960 ArsC family ALIDE_RS07510 PF02875 Mur ligase family, glutamate ligase domain ALIDE_RS07510 PF08245 Mur ligase middle domain ALIDE_RS07515 PF05036 Sporulation related domain ALIDE_RS07520 PF02674 ALIDE_RS07520 ALIDE_RS07520 PF10617 ALIDE_RS07520 ALIDE_RS07525 PF00156 Phosphoribosyl transferase domain ALIDE_RS07525 PF13537 Glutamine amidotransferase domain ALIDE_RS07530 PF01053 Cys/Met metabolism PLP-dependent enzyme ALIDE_RS07535 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALIDE_RS07570 PF00106 short chain dehydrogenase ALIDE_RS07585 PF03050 ALIDE_RS07585 ALIDE_RS07585 PF13005 ALIDE_RS07585 ALIDE_RS07585 PF13007 ALIDE_RS07585 ALIDE_RS07585 PF13817 ALIDE_RS07585 ALIDE_RS07590 PF05717 ALIDE_RS07590 ALIDE_RS07595 PF01527 Transposase ALIDE_RS07605 PF13683 ALIDE_RS07605 ALIDE_RS07610 PF01527 Transposase ALIDE_RS07615 PF12760 Transposase zinc-ribbon domain ALIDE_RS07615 PF12762 ALIDE_RS07615 ALIDE_RS07630 PF00717 Peptidase S24-like ALIDE_RS07635 PF01527 Transposase ALIDE_RS07640 PF00665 Integrase core domain ALIDE_RS07640 PF13276 ALIDE_RS07640 ALIDE_RS07645 PF13416 Bacterial extracellular solute-binding protein ALIDE_RS07650 PF09361 ALIDE_RS07650 ALIDE_RS07655 PF03061 Thioesterase superfamily ALIDE_RS07660 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ALIDE_RS07665 PF16980 ALIDE_RS07665 ALIDE_RS07670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE_RS07670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS07675 PF02646 ALIDE_RS07675 ALIDE_RS07680 PF07690 Major Facilitator Superfamily ALIDE_RS07685 PF03641 Possible lysine decarboxylase ALIDE_RS07690 PF02537 ALIDE_RS07690 ALIDE_RS07700 PF03334 ALIDE_RS07700 ALIDE_RS07705 PF04066 ALIDE_RS07705 ALIDE_RS07710 PF01899 ALIDE_RS07710 ALIDE_RS07715 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ALIDE_RS07720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ALIDE_RS07725 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains ALIDE_RS07725 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ALIDE_RS07725 PF04039 ALIDE_RS07725 ALIDE_RS07725 PF13244 ALIDE_RS07725 ALIDE_RS07730 PF12836 Helix-hairpin-helix motif ALIDE_RS07735 PF13432 Tetratricopeptide repeat ALIDE_RS07735 PF14559 Tetratricopeptide repeat ALIDE_RS07740 PF06305 ALIDE_RS07740 ALIDE_RS07745 PF13616 PPIC-type PPIASE domain ALIDE_RS07750 PF01722 BolA-like protein ALIDE_RS07755 PF04279 ALIDE_RS07755 ALIDE_RS07760 PF01641 SelR domain ALIDE_RS07765 PF02696 ALIDE_RS07765 ALIDE_RS07770 PF00501 AMP-binding enzyme ALIDE_RS07770 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS07775 PF13458 Periplasmic binding protein ALIDE_RS07780 PF02653 ALIDE_RS07780 ALIDE_RS07785 PF02653 ALIDE_RS07785 ALIDE_RS07790 PF00005 ABC transporter ALIDE_RS07790 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS07795 PF00005 ABC transporter ALIDE_RS07800 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS07800 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE_RS07800 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE_RS07805 PF00108 Thiolase, N-terminal domain ALIDE_RS07805 PF02803 Thiolase, C-terminal domain ALIDE_RS07810 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS07815 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS07820 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS07825 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS07825 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS07825 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS07825 PF12418 ALIDE_RS07825 ALIDE_RS07825 PF12806 ALIDE_RS07825 ALIDE_RS07830 PF03358 NADPH-dependent FMN reductase ALIDE_RS07835 PF00892 EamA-like transporter family ALIDE_RS07855 PF08707 ALIDE_RS07855 ALIDE_RS07855 PF13481 AAA domain ALIDE_RS07870 PF00589 Phage integrase family ALIDE_RS07870 PF13356 Domain of unknown function (DUF4102) ALIDE_RS07875 PF02321 Outer membrane efflux protein ALIDE_RS07880 PF00581 Rhodanese-like domain ALIDE_RS07885 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) ALIDE_RS07890 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS07890 PF16859 ALIDE_RS07890 ALIDE_RS07895 PF01625 Peptide methionine sulfoxide reductase ALIDE_RS07905 PF00593 TonB dependent receptor ALIDE_RS07905 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS07915 PF02417 ALIDE_RS07915 ALIDE_RS07920 PF03547 ALIDE_RS07920 ALIDE_RS07925 PF01243 Pyridoxamine 5'-phosphate oxidase ALIDE_RS07930 PF04752 ALIDE_RS07930 ALIDE_RS07935 PF00691 OmpA family ALIDE_RS07940 PF01904 Protein of unknown function DUF72 ALIDE_RS07950 PF00575 S1 RNA binding domain ALIDE_RS07950 PF09371 Tex-like protein N-terminal domain ALIDE_RS07950 PF12836 Helix-hairpin-helix motif ALIDE_RS07950 PF16921 ALIDE_RS07950 ALIDE_RS07955 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS07960 PF01796 ALIDE_RS07960 ALIDE_RS07960 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) ALIDE_RS07970 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS07975 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS07980 PF00501 AMP-binding enzyme ALIDE_RS07980 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS07985 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS07990 PF00356 Bacterial regulatory proteins, lacI family ALIDE_RS07990 PF13377 Periplasmic binding protein-like domain ALIDE_RS07995 PF00285 Citrate synthase ALIDE_RS08000 PF02515 CoA-transferase family III ALIDE_RS08005 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS08010 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS08015 PF04909 Amidohydrolase ALIDE_RS08020 PF01614 Bacterial transcriptional regulator ALIDE_RS08020 PF09339 IclR helix-turn-helix domain ALIDE_RS08025 PF08668 HDOD domain ALIDE_RS08035 PF07859 alpha/beta hydrolase fold ALIDE_RS08040 PF03061 Thioesterase superfamily ALIDE_RS08040 PF13673 Acetyltransferase (GNAT) domain ALIDE_RS08045 PF03928 Domain of unknown function (DUF336) ALIDE_RS08050 PF00072 Response regulator receiver domain ALIDE_RS08050 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS08055 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS08055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS08060 PF07690 Major Facilitator Superfamily ALIDE_RS08065 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALIDE_RS08070 PF01571 Aminomethyltransferase folate-binding domain ALIDE_RS08070 PF08669 Glycine cleavage T-protein C-terminal barrel domain ALIDE_RS08075 PF02618 YceG-like family ALIDE_RS08080 PF02223 Thymidylate kinase ALIDE_RS08085 PF13177 DNA polymerase III, delta subunit ALIDE_RS08090 PF07238 PilZ domain ALIDE_RS08095 PF01026 TatD related DNase ALIDE_RS08100 PF12796 Ankyrin repeats (3 copies) ALIDE_RS08110 PF10087 ALIDE_RS08110 ALIDE_RS08115 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS08115 PF07729 FCD domain ALIDE_RS08120 PF07690 Major Facilitator Superfamily ALIDE_RS08125 PF03746 LamB/YcsF family ALIDE_RS08130 PF07286 Protein of unknown function (DUF1445) ALIDE_RS08135 PF02626 Allophanate hydrolase subunit 2 ALIDE_RS08135 PF02682 Allophanate hydrolase subunit 1 ALIDE_RS08140 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS08140 PF00364 Biotin-requiring enzyme ALIDE_RS08140 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS08140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS08145 PF00005 ABC transporter ALIDE_RS08145 PF00664 ABC transporter transmembrane region ALIDE_RS08150 PF04052 TolB amino-terminal domain ALIDE_RS08150 PF07676 WD40-like Beta Propeller Repeat ALIDE_RS08155 PF00691 OmpA family ALIDE_RS08160 PF13525 Outer membrane lipoprotein ALIDE_RS08160 PF16331 ALIDE_RS08160 ALIDE_RS08165 PF00899 ThiF family ALIDE_RS08175 PF00589 Phage integrase family ALIDE_RS08200 PF09588 YqaJ-like viral recombinase domain ALIDE_RS08245 PF00565 Staphylococcal nuclease homologue ALIDE_RS08250 PF07589 ALIDE_RS08250 ALIDE_RS08265 PF01381 Helix-turn-helix ALIDE_RS08285 PF00772 DnaB-like helicase N terminal domain ALIDE_RS08285 PF03796 DnaB-like helicase C terminal domain ALIDE_RS08305 PF07105 ALIDE_RS08305 ALIDE_RS08340 PF13252 ALIDE_RS08340 ALIDE_RS08370 PF14213 ALIDE_RS08370 ALIDE_RS08385 PF02481 DNA recombination-mediator protein A ALIDE_RS08450 PF16082 ALIDE_RS08450 ALIDE_RS08470 PF15919 ALIDE_RS08470 ALIDE_RS08475 PF07927 YcfA-like protein ALIDE_RS08500 PF00589 Phage integrase family ALIDE_RS08510 PF01609 Transposase DDE domain ALIDE_RS08510 PF05598 ALIDE_RS08510 ALIDE_RS08515 PF01695 IstB-like ATP binding protein ALIDE_RS08520 PF00665 Integrase core domain ALIDE_RS08535 PF00589 Phage integrase family ALIDE_RS08535 PF13356 Domain of unknown function (DUF4102) ALIDE_RS08540 PF09084 NMT1/THI5 like ALIDE_RS08545 PF01464 Transglycosylase SLT domain ALIDE_RS08545 PF01476 LysM domain ALIDE_RS08550 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS08550 PF16123 ALIDE_RS08550 ALIDE_RS08555 PF08241 Methyltransferase domain ALIDE_RS08560 PF00075 RNase H ALIDE_RS08565 PF00155 Aminotransferase class I and II ALIDE_RS08570 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS08575 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS08580 PF03466 LysR substrate binding domain ALIDE_RS08585 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS08590 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS08595 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS08605 PF00085 Thioredoxin ALIDE_RS08610 PF00994 Probable molybdopterin binding domain ALIDE_RS08610 PF03453 MoeA N-terminal region (domain I and II) ALIDE_RS08610 PF03454 MoeA C-terminal region (domain IV) ALIDE_RS08615 PF00583 Acetyltransferase (GNAT) family ALIDE_RS08620 PF12804 MobA-like NTP transferase domain ALIDE_RS08625 PF04055 Radical SAM superfamily ALIDE_RS08625 PF06463 Molybdenum Cofactor Synthesis C ALIDE_RS08625 PF13353 4Fe-4S single cluster domain ALIDE_RS08630 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ALIDE_RS08635 PF11136 ALIDE_RS08635 ALIDE_RS08640 PF00171 Aldehyde dehydrogenase family ALIDE_RS08645 PF03030 Inorganic H+ pyrophosphatase ALIDE_RS08650 PF00719 Inorganic pyrophosphatase ALIDE_RS08655 PF01584 CheW-like domain ALIDE_RS08660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS08660 PF00672 HAMP domain ALIDE_RS08660 PF12729 ALIDE_RS08660 ALIDE_RS08665 PF04339 ALIDE_RS08665 ALIDE_RS08670 PF00593 TonB dependent receptor ALIDE_RS08675 PF00795 Carbon-nitrogen hydrolase ALIDE_RS08675 PF02540 NAD synthase ALIDE_RS08680 PF00543 Nitrogen regulatory protein P-II ALIDE_RS08685 PF03641 Possible lysine decarboxylase ALIDE_RS08690 PF01219 Prokaryotic diacylglycerol kinase ALIDE_RS08695 PF06271 ALIDE_RS08695 ALIDE_RS08700 PF11304 ALIDE_RS08700 ALIDE_RS08705 PF12279 ALIDE_RS08705 ALIDE_RS08710 PF08281 Sigma-70, region 4 ALIDE_RS08715 PF00205 Thiamine pyrophosphate enzyme, central domain ALIDE_RS08715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE_RS08715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALIDE_RS08720 PF10369 Small subunit of acetolactate synthase ALIDE_RS08720 PF13710 ACT domain ALIDE_RS08725 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ALIDE_RS08725 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain ALIDE_RS08730 PF01066 CDP-alcohol phosphatidyltransferase ALIDE_RS08735 PF13417 Glutathione S-transferase, N-terminal domain ALIDE_RS08740 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE_RS08745 PF07690 Major Facilitator Superfamily ALIDE_RS08750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS08755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS08755 PF03466 LysR substrate binding domain ALIDE_RS08760 PF00682 HMGL-like ALIDE_RS08760 PF08502 LeuA allosteric (dimerisation) domain ALIDE_RS08765 PF00682 HMGL-like ALIDE_RS08765 PF08502 LeuA allosteric (dimerisation) domain ALIDE_RS08770 PF00768 D-alanyl-D-alanine carboxypeptidase ALIDE_RS08775 PF01614 Bacterial transcriptional regulator ALIDE_RS08775 PF09339 IclR helix-turn-helix domain ALIDE_RS08780 PF00474 Sodium:solute symporter family ALIDE_RS08785 PF00171 Aldehyde dehydrogenase family ALIDE_RS08785 PF01619 Proline dehydrogenase ALIDE_RS08785 PF14850 DNA-binding domain of Proline dehydrogenase ALIDE_RS08790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS08790 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS08790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS08795 PF01636 Phosphotransferase enzyme family ALIDE_RS08800 PF00027 Cyclic nucleotide-binding domain ALIDE_RS08800 PF13545 Crp-like helix-turn-helix domain ALIDE_RS08805 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS08810 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE_RS08810 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE_RS08820 PF02581 Thiamine monophosphate synthase/TENI ALIDE_RS08825 PF05690 Thiazole biosynthesis protein ThiG ALIDE_RS08830 PF02597 ThiS family ALIDE_RS08835 PF01266 FAD dependent oxidoreductase ALIDE_RS08840 PF08543 Phosphomethylpyrimidine kinase ALIDE_RS08845 PF06347 Bacterial SH3 domain ALIDE_RS08845 PF08239 Bacterial SH3 domain ALIDE_RS08850 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ALIDE_RS08855 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS08860 PF00037 4Fe-4S binding domain ALIDE_RS08860 PF11953 Domain of unknown function (DUF3470) ALIDE_RS08865 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS08870 PF01507 Phosphoadenosine phosphosulfate reductase family ALIDE_RS08875 PF01507 Phosphoadenosine phosphosulfate reductase family ALIDE_RS08880 PF06073 ALIDE_RS08880 ALIDE_RS08885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALIDE_RS08885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ALIDE_RS08890 PF01925 ALIDE_RS08890 ALIDE_RS08895 PF01266 FAD dependent oxidoreductase ALIDE_RS08895 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ALIDE_RS08900 PF03458 ALIDE_RS08900 ALIDE_RS08905 PF04362 Bacterial Fe(2+) trafficking ALIDE_RS08910 PF13531 Bacterial extracellular solute-binding protein ALIDE_RS08925 PF00501 AMP-binding enzyme ALIDE_RS08925 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS08930 PF00108 Thiolase, N-terminal domain ALIDE_RS08930 PF02803 Thiolase, C-terminal domain ALIDE_RS08935 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS08940 PF13458 Periplasmic binding protein ALIDE_RS08945 PF02653 ALIDE_RS08945 ALIDE_RS08950 PF02653 ALIDE_RS08950 ALIDE_RS08955 PF00005 ABC transporter ALIDE_RS08955 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS08960 PF00005 ABC transporter ALIDE_RS08965 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS08970 PF00501 AMP-binding enzyme ALIDE_RS08970 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS08975 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS08990 PF13379 NMT1-like family ALIDE_RS08995 PF01464 Transglycosylase SLT domain ALIDE_RS08995 PF08238 Sel1 repeat ALIDE_RS09005 PF01527 Transposase ALIDE_RS09010 PF00665 Integrase core domain ALIDE_RS09010 PF13276 ALIDE_RS09010 ALIDE_RS09030 PF00403 Heavy-metal-associated domain ALIDE_RS09030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE_RS09030 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS09035 PF00403 Heavy-metal-associated domain ALIDE_RS09040 PF02411 ALIDE_RS09040 ALIDE_RS09045 PF00376 MerR family regulatory protein ALIDE_RS09045 PF09278 MerR, DNA binding ALIDE_RS09050 PF12101 ALIDE_RS09050 ALIDE_RS09055 PF11679 ALIDE_RS09055 ALIDE_RS09085 PF00665 Integrase core domain ALIDE_RS09085 PF13276 ALIDE_RS09085 ALIDE_RS09090 PF01527 Transposase ALIDE_RS09095 PF03466 LysR substrate binding domain ALIDE_RS09100 PF00589 Phage integrase family ALIDE_RS09100 PF13356 Domain of unknown function (DUF4102) ALIDE_RS09110 PF02082 Transcriptional regulator ALIDE_RS09125 PF02666 ALIDE_RS09125 ALIDE_RS09130 PF00571 CBS domain ALIDE_RS09130 PF04982 ALIDE_RS09130 ALIDE_RS09135 PF01176 Translation initiation factor 1A / IF-1 ALIDE_RS09145 PF00990 GGDEF domain ALIDE_RS09150 PF07786 ALIDE_RS09150 ALIDE_RS09155 PF00216 Bacterial DNA-binding protein ALIDE_RS09160 PF00575 S1 RNA binding domain ALIDE_RS09165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALIDE_RS09165 PF02224 Cytidylate kinase ALIDE_RS09170 PF02153 Prephenate dehydrogenase ALIDE_RS09175 PF00800 Prephenate dehydratase ALIDE_RS09175 PF01817 Chorismate mutase type II ALIDE_RS09175 PF01842 ACT domain ALIDE_RS09180 PF00266 Aminotransferase class-V ALIDE_RS09185 PF00521 DNA gyrase/topoisomerase IV, subunit A ALIDE_RS09185 PF03989 DNA gyrase C-terminal domain, beta-propeller ALIDE_RS09190 PF00691 OmpA family ALIDE_RS09195 PF13489 Methyltransferase domain ALIDE_RS09200 PF13419 Haloacid dehalogenase-like hydrolase ALIDE_RS09205 PF02586 Uncharacterised ACR, COG2135 ALIDE_RS09210 PF00717 Peptidase S24-like ALIDE_RS09215 PF00817 impB/mucB/samB family ALIDE_RS09215 PF11799 impB/mucB/samB family C-terminal domain ALIDE_RS09215 PF13438 ALIDE_RS09215 ALIDE_RS09230 PF00239 Resolvase, N terminal domain ALIDE_RS09230 PF07508 Recombinase ALIDE_RS09235 PF11149 ALIDE_RS09235 ALIDE_RS09245 PF12844 Helix-turn-helix domain ALIDE_RS09255 PF02538 ALIDE_RS09255 ALIDE_RS09260 PF01968 Hydantoinase/oxoprolinase ALIDE_RS09265 PF01527 Transposase ALIDE_RS09270 PF05717 ALIDE_RS09270 ALIDE_RS09275 PF03050 ALIDE_RS09275 ALIDE_RS09275 PF13005 ALIDE_RS09275 ALIDE_RS09275 PF13007 ALIDE_RS09275 ALIDE_RS09275 PF13817 ALIDE_RS09275 ALIDE_RS09280 PF01968 Hydantoinase/oxoprolinase ALIDE_RS09280 PF05378 ALIDE_RS09280 ALIDE_RS09285 PF00665 Integrase core domain ALIDE_RS09285 PF13276 ALIDE_RS09285 ALIDE_RS09290 PF01527 Transposase ALIDE_RS09295 PF01266 FAD dependent oxidoreductase ALIDE_RS09300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS09300 PF03466 LysR substrate binding domain ALIDE_RS09305 PF04960 Glutaminase ALIDE_RS09310 PF01546 Peptidase family M20/M25/M40 ALIDE_RS09310 PF07687 Peptidase dimerisation domain ALIDE_RS09315 PF00083 Sugar (and other) transporter ALIDE_RS09320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS09320 PF03466 LysR substrate binding domain ALIDE_RS09335 PF08681 Protein of unknown function (DUF1778) ALIDE_RS09340 PF07690 Major Facilitator Superfamily ALIDE_RS09345 PF00106 short chain dehydrogenase ALIDE_RS09350 PF03061 Thioesterase superfamily ALIDE_RS09355 PF00107 Zinc-binding dehydrogenase ALIDE_RS09355 PF16884 ALIDE_RS09355 ALIDE_RS09360 PF13410 Glutathione S-transferase, C-terminal domain ALIDE_RS09360 PF13417 Glutathione S-transferase, N-terminal domain ALIDE_RS09365 PF07603 ALIDE_RS09365 ALIDE_RS09370 PF07690 Major Facilitator Superfamily ALIDE_RS09375 PF00875 DNA photolyase ALIDE_RS09375 PF03441 FAD binding domain of DNA photolyase ALIDE_RS09380 PF05425 ALIDE_RS09380 ALIDE_RS09385 PF01717 Cobalamin-independent synthase, Catalytic domain ALIDE_RS09385 PF08267 Cobalamin-independent synthase, N-terminal domain ALIDE_RS09390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS09390 PF03466 LysR substrate binding domain ALIDE_RS09400 PF11804 ALIDE_RS09400 ALIDE_RS09405 PF11454 ALIDE_RS09405 ALIDE_RS09410 PF13714 Phosphoenolpyruvate phosphomutase ALIDE_RS09415 PF04303 PrpF protein ALIDE_RS09420 PF00330 Aconitase family (aconitate hydratase) ALIDE_RS09420 PF00694 Aconitase C-terminal domain ALIDE_RS09425 PF00285 Citrate synthase ALIDE_RS09430 PF03061 Thioesterase superfamily ALIDE_RS09435 PF01381 Helix-turn-helix ALIDE_RS09435 PF06114 Domain of unknown function (DUF955) ALIDE_RS09435 PF09856 ALIDE_RS09435 ALIDE_RS09440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS09440 PF03466 LysR substrate binding domain ALIDE_RS09445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS09455 PF01479 S4 domain ALIDE_RS09460 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS09460 PF00672 HAMP domain ALIDE_RS09460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS09460 PF08521 ALIDE_RS09460 ALIDE_RS09465 PF00072 Response regulator receiver domain ALIDE_RS09465 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS09470 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS09475 PF07331 ALIDE_RS09475 ALIDE_RS09480 PF01970 ALIDE_RS09480 ALIDE_RS09485 PF10605 ALIDE_RS09485 ALIDE_RS09490 PF04366 ALIDE_RS09490 ALIDE_RS09495 PF04143 ALIDE_RS09495 ALIDE_RS09500 PF00581 Rhodanese-like domain ALIDE_RS09505 PF00762 Ferrochelatase ALIDE_RS09510 PF13419 Haloacid dehalogenase-like hydrolase ALIDE_RS09515 PF00122 E1-E2 ATPase ALIDE_RS09515 PF00689 Cation transporting ATPase, C-terminus ALIDE_RS09515 PF00690 Cation transporter/ATPase, N-terminus ALIDE_RS09515 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS09520 PF12697 Alpha/beta hydrolase family ALIDE_RS09525 PF01053 Cys/Met metabolism PLP-dependent enzyme ALIDE_RS09530 PF00571 CBS domain ALIDE_RS09535 PF01264 Chorismate synthase ALIDE_RS09540 PF03477 ATP cone domain ALIDE_RS09545 PF00464 Serine hydroxymethyltransferase ALIDE_RS09550 PF01464 Transglycosylase SLT domain ALIDE_RS09555 PF00691 OmpA family ALIDE_RS09555 PF05359 ALIDE_RS09555 ALIDE_RS09560 PF03993 ALIDE_RS09560 ALIDE_RS09575 PF00575 S1 RNA binding domain ALIDE_RS09575 PF00773 RNB domain ALIDE_RS09575 PF08206 Ribonuclease B OB domain ALIDE_RS09580 PF00106 short chain dehydrogenase ALIDE_RS09585 PF00034 Cytochrome c ALIDE_RS09590 PF00034 Cytochrome c ALIDE_RS09590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS09595 PF00085 Thioredoxin ALIDE_RS09600 PF02576 Uncharacterised BCR, YhbC family COG0779 ALIDE_RS09605 PF00575 S1 RNA binding domain ALIDE_RS09605 PF08529 NusA N-terminal domain ALIDE_RS09605 PF13184 NusA-like KH domain ALIDE_RS09605 PF14520 Helix-hairpin-helix domain ALIDE_RS09610 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS09610 PF04760 Translation initiation factor IF-2, N-terminal region ALIDE_RS09610 PF08364 ALIDE_RS09610 ALIDE_RS09610 PF11987 Translation-initiation factor 2 ALIDE_RS09615 PF02033 Ribosome-binding factor A ALIDE_RS09620 PF01509 TruB family pseudouridylate synthase (N terminal domain) ALIDE_RS09620 PF09157 Pseudouridine synthase II TruB, C-terminal ALIDE_RS09620 PF16198 ALIDE_RS09620 ALIDE_RS09625 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS09625 PF00679 Elongation factor G C-terminus ALIDE_RS09625 PF03144 Elongation factor Tu domain 2 ALIDE_RS09630 PF04072 Leucine carboxyl methyltransferase ALIDE_RS09635 PF16113 ALIDE_RS09635 ALIDE_RS09645 PF04542 Sigma-70 region 2 ALIDE_RS09645 PF08281 Sigma-70, region 4 ALIDE_RS09650 PF03640 ALIDE_RS09650 ALIDE_RS09655 PF01668 SmpB protein ALIDE_RS09660 PF03364 Polyketide cyclase / dehydrase and lipid transport ALIDE_RS09665 PF03658 RnfH family Ubiquitin ALIDE_RS09670 PF13511 ALIDE_RS09670 ALIDE_RS09675 PF00478 IMP dehydrogenase / GMP reductase domain ALIDE_RS09675 PF00571 CBS domain ALIDE_RS09680 PF00117 Glutamine amidotransferase class-I ALIDE_RS09680 PF00958 GMP synthase C terminal domain ALIDE_RS09680 PF02540 NAD synthase ALIDE_RS09685 PF00589 Phage integrase family ALIDE_RS09685 PF13356 Domain of unknown function (DUF4102) ALIDE_RS09685 PF14659 Phage integrase, N-terminal SAM-like domain ALIDE_RS09690 PF00285 Citrate synthase ALIDE_RS09695 PF03937 Flavinator of succinate dehydrogenase ALIDE_RS09700 PF13085 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS09700 PF13237 4Fe-4S dicluster domain ALIDE_RS09705 PF00890 FAD binding domain ALIDE_RS09705 PF02910 Fumarate reductase flavoprotein C-term ALIDE_RS09710 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ALIDE_RS09715 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ALIDE_RS09720 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS09720 PF07702 UTRA domain ALIDE_RS09725 PF00056 lactate/malate dehydrogenase, NAD binding domain ALIDE_RS09725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALIDE_RS09730 PF13649 Methyltransferase domain ALIDE_RS09740 PF00330 Aconitase family (aconitate hydratase) ALIDE_RS09740 PF06434 Aconitate hydratase 2 N-terminus ALIDE_RS09740 PF11791 Aconitate B N-terminal domain ALIDE_RS09750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS09750 PF03466 LysR substrate binding domain ALIDE_RS09755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS09755 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS09760 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS09765 PF02515 CoA-transferase family III ALIDE_RS09770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE_RS09770 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS09775 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS09775 PF01799 [2Fe-2S] binding domain ALIDE_RS09780 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ALIDE_RS09780 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ALIDE_RS09785 PF00941 FAD binding domain in molybdopterin dehydrogenase ALIDE_RS09790 PF07728 AAA domain (dynein-related subfamily) ALIDE_RS09795 PF05762 VWA domain containing CoxE-like protein ALIDE_RS09800 PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) ALIDE_RS09805 PF02625 XdhC and CoxI family ALIDE_RS09805 PF13478 XdhC Rossmann domain ALIDE_RS09810 PF12804 MobA-like NTP transferase domain ALIDE_RS09825 PF01593 Flavin containing amine oxidoreductase ALIDE_RS09830 PF03706 ALIDE_RS09830 ALIDE_RS09835 PF00535 Glycosyl transferase family 2 ALIDE_RS09840 PF01136 ALIDE_RS09840 ALIDE_RS09840 PF16325 ALIDE_RS09840 ALIDE_RS09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS09850 PF03466 LysR substrate binding domain ALIDE_RS09855 PF01925 ALIDE_RS09855 ALIDE_RS09860 PF00072 Response regulator receiver domain ALIDE_RS09860 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS09865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS09870 PF02104 ALIDE_RS09870 ALIDE_RS09875 PF03626 ALIDE_RS09875 ALIDE_RS09880 PF00510 Cytochrome c oxidase subunit III ALIDE_RS09885 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE_RS09890 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALIDE_RS09890 PF06481 COX Aromatic Rich Motif ALIDE_RS09895 PF07690 Major Facilitator Superfamily ALIDE_RS09900 PF13103 TonB C terminal ALIDE_RS09905 PF02472 Biopolymer transport protein ExbD/TolR ALIDE_RS09910 PF01618 ALIDE_RS09910 ALIDE_RS09915 PF03061 Thioesterase superfamily ALIDE_RS09920 PF00155 Aminotransferase class I and II ALIDE_RS09925 PF01029 NusB family ALIDE_RS09930 PF00885 6,7-dimethyl-8-ribityllumazine synthase ALIDE_RS09935 PF00925 GTP cyclohydrolase II ALIDE_RS09935 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ALIDE_RS09940 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS09950 PF00106 short chain dehydrogenase ALIDE_RS09955 PF04262 Glutamate-cysteine ligase ALIDE_RS09960 PF12805 ALIDE_RS09960 ALIDE_RS09960 PF13515 ALIDE_RS09960 ALIDE_RS09970 PF01042 Endoribonuclease L-PSP ALIDE_RS09975 PF04324 BFD-like [2Fe-2S] binding domain ALIDE_RS09975 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS09980 PF13510 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS09985 PF01266 FAD dependent oxidoreductase ALIDE_RS09990 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS09995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS09995 PF03466 LysR substrate binding domain ALIDE_RS10000 PF01926 50S ribosome-binding GTPase ALIDE_RS10010 PF00849 RNA pseudouridylate synthase ALIDE_RS10020 PF02272 DHHA1 domain ALIDE_RS10025 PF05977 Transmembrane secretion effector ALIDE_RS10030 PF00565 Staphylococcal nuclease homologue ALIDE_RS10035 PF00892 EamA-like transporter family ALIDE_RS10040 PF00849 RNA pseudouridylate synthase ALIDE_RS10045 PF01551 Peptidase family M23 ALIDE_RS10050 PF00206 Lyase ALIDE_RS10050 PF10415 Fumarase C C-terminus ALIDE_RS10055 PF03724 META domain ALIDE_RS10055 PF14302 ALIDE_RS10055 ALIDE_RS10060 PF06041 Bacterial protein of unknown function (DUF924) ALIDE_RS10065 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALIDE_RS10065 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ALIDE_RS10075 PF01220 Dehydroquinase class II ALIDE_RS10080 PF12697 Alpha/beta hydrolase family ALIDE_RS10085 PF00472 RF-1 domain ALIDE_RS10090 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ALIDE_RS10095 PF02230 Phospholipase/Carboxylesterase ALIDE_RS10100 PF11219 ALIDE_RS10100 ALIDE_RS10105 PF01037 AsnC family ALIDE_RS10105 PF13412 Winged helix-turn-helix DNA-binding ALIDE_RS10110 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE_RS10115 PF01425 Amidase ALIDE_RS10120 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS10125 PF08765 Mor transcription activator family ALIDE_RS10135 PF00216 Bacterial DNA-binding protein ALIDE_RS10150 PF10800 ALIDE_RS10150 ALIDE_RS10180 PF13401 AAA domain ALIDE_RS10185 PF00665 Integrase core domain ALIDE_RS10240 PF13272 ALIDE_RS10240 ALIDE_RS10245 PF01464 Transglycosylase SLT domain ALIDE_RS10260 PF01258 Prokaryotic dksA/traR C4-type zinc finger ALIDE_RS10265 PF10805 ALIDE_RS10265 ALIDE_RS10275 PF11985 ALIDE_RS10275 ALIDE_RS10280 PF03237 Terminase-like family ALIDE_RS10285 PF06074 ALIDE_RS10285 ALIDE_RS10290 PF04233 ALIDE_RS10290 ALIDE_RS10295 PF05069 ALIDE_RS10295 ALIDE_RS10300 PF10123 ALIDE_RS10300 ALIDE_RS10310 PF10124 ALIDE_RS10310 ALIDE_RS10320 PF07030 ALIDE_RS10320 ALIDE_RS10345 PF08809 ALIDE_RS10345 ALIDE_RS10395 PF01609 Transposase DDE domain ALIDE_RS10395 PF05598 ALIDE_RS10395 ALIDE_RS10400 PF14301 ALIDE_RS10400 ALIDE_RS10405 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS10410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS10410 PF03466 LysR substrate binding domain ALIDE_RS10415 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS10415 PF07729 FCD domain ALIDE_RS10420 PF07690 Major Facilitator Superfamily ALIDE_RS10425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS10425 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE_RS10430 PF01370 NAD dependent epimerase/dehydratase family ALIDE_RS10435 PF07005 Protein of unknown function, DUF1537 ALIDE_RS10435 PF17042 ALIDE_RS10435 ALIDE_RS10440 PF00596 Class II Aldolase and Adducin N-terminal domain ALIDE_RS10445 PF01261 Xylose isomerase-like TIM barrel ALIDE_RS10450 PF06167 Glucose-regulated metallo-peptidase M90 ALIDE_RS10455 PF00149 Calcineurin-like phosphoesterase ALIDE_RS10460 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALIDE_RS10465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALIDE_RS10470 PF03734 L,D-transpeptidase catalytic domain ALIDE_RS10475 PF13414 TPR repeat ALIDE_RS10475 PF13432 Tetratricopeptide repeat ALIDE_RS10480 PF01406 tRNA synthetases class I (C) catalytic domain ALIDE_RS10480 PF09190 DALR domain ALIDE_RS10485 PF00730 HhH-GPD superfamily base excision DNA repair protein ALIDE_RS10490 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ALIDE_RS10495 PF01171 PP-loop family ALIDE_RS10495 PF09179 TilS substrate binding domain ALIDE_RS10500 PF00696 Amino acid kinase family ALIDE_RS10500 PF01842 ACT domain ALIDE_RS10500 PF13840 ACT domain ALIDE_RS10505 PF00654 Voltage gated chloride channel ALIDE_RS10515 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS10520 PF00665 Integrase core domain ALIDE_RS10520 PF13276 ALIDE_RS10520 ALIDE_RS10525 PF01527 Transposase ALIDE_RS10530 PF08359 YsiA-like protein, C-terminal region ALIDE_RS10535 PF16576 ALIDE_RS10535 ALIDE_RS10540 PF02687 ALIDE_RS10540 ALIDE_RS10540 PF12704 MacB-like periplasmic core domain ALIDE_RS10545 PF00005 ABC transporter ALIDE_RS10550 PF01471 Putative peptidoglycan binding domain ALIDE_RS10550 PF13406 Transglycosylase SLT domain ALIDE_RS10555 PF00929 Exonuclease ALIDE_RS10555 PF08411 Exonuclease C-terminal ALIDE_RS10560 PF02146 Sir2 family ALIDE_RS10565 PF01594 ALIDE_RS10565 ALIDE_RS10565 PF13185 GAF domain ALIDE_RS10570 PF13302 Acetyltransferase (GNAT) domain ALIDE_RS10575 PF14681 Uracil phosphoribosyltransferase ALIDE_RS10580 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS10585 PF01709 Transcriptional regulator ALIDE_RS10595 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ALIDE_RS10595 PF12801 ALIDE_RS10595 ALIDE_RS10595 PF13746 4Fe-4S dicluster domain ALIDE_RS10600 PF01654 ALIDE_RS10600 ALIDE_RS10605 PF02322 ALIDE_RS10605 ALIDE_RS10615 PF04172 ALIDE_RS10615 ALIDE_RS10620 PF03788 ALIDE_RS10620 ALIDE_RS10625 PF00155 Aminotransferase class I and II ALIDE_RS10625 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS10630 PF00043 Glutathione S-transferase, C-terminal domain ALIDE_RS10630 PF02798 Glutathione S-transferase, N-terminal domain ALIDE_RS10635 PF05872 ALIDE_RS10635 ALIDE_RS10640 PF01709 Transcriptional regulator ALIDE_RS10645 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ALIDE_RS10645 PF02843 Phosphoribosylglycinamide synthetase, C domain ALIDE_RS10645 PF02844 Phosphoribosylglycinamide synthetase, N domain ALIDE_RS10650 PF01218 Coproporphyrinogen III oxidase ALIDE_RS10655 PF02410 Oligomerisation domain ALIDE_RS10660 PF02590 Predicted SPOUT methyltransferase ALIDE_RS10665 PF02545 Maf-like protein ALIDE_RS10670 PF00027 Cyclic nucleotide-binding domain ALIDE_RS10670 PF13545 Crp-like helix-turn-helix domain ALIDE_RS10675 PF02239 Cytochrome D1 heme domain ALIDE_RS10675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS10680 PF04055 Radical SAM superfamily ALIDE_RS10680 PF13353 4Fe-4S single cluster domain ALIDE_RS10695 PF02239 Cytochrome D1 heme domain ALIDE_RS10700 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS10705 PF02239 Cytochrome D1 heme domain ALIDE_RS10705 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS10710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALIDE_RS10715 PF10150 Ribonuclease E/G family ALIDE_RS10720 PF00990 GGDEF domain ALIDE_RS10725 PF03466 LysR substrate binding domain ALIDE_RS10730 PF00155 Aminotransferase class I and II ALIDE_RS10735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS10735 PF03466 LysR substrate binding domain ALIDE_RS10740 PF01903 CbiX ALIDE_RS10745 PF03739 ALIDE_RS10745 ALIDE_RS10750 PF03739 ALIDE_RS10750 ALIDE_RS10755 PF00883 Cytosol aminopeptidase family, catalytic domain ALIDE_RS10755 PF02789 Cytosol aminopeptidase family, N-terminal domain ALIDE_RS10760 PF04364 DNA polymerase III chi subunit, HolC ALIDE_RS10770 PF13458 Periplasmic binding protein ALIDE_RS10775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE_RS10775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS10800 PF10014 2OG-Fe dioxygenase ALIDE_RS10805 PF00582 Universal stress protein family ALIDE_RS10810 PF01814 Hemerythrin HHE cation binding domain ALIDE_RS10815 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS10820 PF00108 Thiolase, N-terminal domain ALIDE_RS10820 PF02803 Thiolase, C-terminal domain ALIDE_RS10825 PF00106 short chain dehydrogenase ALIDE_RS10830 PF00849 RNA pseudouridylate synthase ALIDE_RS10835 PF00072 Response regulator receiver domain ALIDE_RS10835 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS10835 PF00989 PAS fold ALIDE_RS10835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS10835 PF13188 PAS domain ALIDE_RS10840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE_RS10845 PF00072 Response regulator receiver domain ALIDE_RS10845 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS10850 PF07730 Histidine kinase ALIDE_RS10860 PF08534 Redoxin ALIDE_RS10865 PF13563 2'-5' RNA ligase superfamily ALIDE_RS10875 PF13801 Heavy-metal resistance ALIDE_RS10880 PF13490 Putative zinc-finger ALIDE_RS10885 PF04542 Sigma-70 region 2 ALIDE_RS10885 PF08281 Sigma-70, region 4 ALIDE_RS10895 PF05958 tRNA (Uracil-5-)-methyltransferase ALIDE_RS10900 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS10905 PF01205 Uncharacterized protein family UPF0029 ALIDE_RS10905 PF09186 Domain of unknown function (DUF1949) ALIDE_RS10910 PF00127 Copper binding proteins, plastocyanin/azurin family ALIDE_RS10915 PF04055 Radical SAM superfamily ALIDE_RS10915 PF08497 ALIDE_RS10915 ALIDE_RS10915 PF11842 ALIDE_RS10915 ALIDE_RS10920 PF00155 Aminotransferase class I and II ALIDE_RS10925 PF00271 Helicase conserved C-terminal domain ALIDE_RS10925 PF02151 UvrB/uvrC motif ALIDE_RS10925 PF04851 Type III restriction enzyme, res subunit ALIDE_RS10925 PF12344 Ultra-violet resistance protein B ALIDE_RS10930 PF02082 Transcriptional regulator ALIDE_RS10935 PF00266 Aminotransferase class-V ALIDE_RS10940 PF01592 NifU-like N terminal domain ALIDE_RS10945 PF01521 Iron-sulphur cluster biosynthesis ALIDE_RS10950 PF07743 HSCB C-terminal oligomerisation domain ALIDE_RS10955 PF00012 Hsp70 protein ALIDE_RS10960 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS10965 PF00929 Exonuclease ALIDE_RS10980 PF01266 FAD dependent oxidoreductase ALIDE_RS10985 PF05957 ALIDE_RS10985 ALIDE_RS10990 PF07332 ALIDE_RS10990 ALIDE_RS11000 PF01180 Dihydroorotate dehydrogenase ALIDE_RS11005 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ALIDE_RS11010 PF00462 Glutaredoxin ALIDE_RS11010 PF13511 ALIDE_RS11010 ALIDE_RS11015 PF01432 Peptidase family M3 ALIDE_RS11020 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ALIDE_RS11020 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ALIDE_RS11025 PF00072 Response regulator receiver domain ALIDE_RS11025 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS11030 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS11030 PF00989 PAS fold ALIDE_RS11030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS11035 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE_RS11040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE_RS11040 PF00364 Biotin-requiring enzyme ALIDE_RS11040 PF02817 e3 binding domain ALIDE_RS11045 PF00364 Biotin-requiring enzyme ALIDE_RS11045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE_RS11045 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS11065 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11070 PF02661 Fic/DOC family ALIDE_RS11075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS11075 PF03466 LysR substrate binding domain ALIDE_RS11080 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS11085 PF03972 MmgE/PrpD family ALIDE_RS11090 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11095 PF10672 S-adenosylmethionine-dependent methyltransferase ALIDE_RS11105 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS11105 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE_RS11115 PF01878 EVE domain ALIDE_RS11120 PF04226 ALIDE_RS11120 ALIDE_RS11125 PF00877 NlpC/P60 family ALIDE_RS11130 PF00324 Amino acid permease ALIDE_RS11135 PF07690 Major Facilitator Superfamily ALIDE_RS11140 PF00563 EAL domain ALIDE_RS11140 PF00990 GGDEF domain ALIDE_RS11140 PF03924 CHASE domain ALIDE_RS11140 PF13426 PAS domain ALIDE_RS11145 PF02694 ALIDE_RS11145 ALIDE_RS11150 PF07589 ALIDE_RS11150 ALIDE_RS11155 PF02463 RecF/RecN/SMC N terminal domain ALIDE_RS11155 PF06470 SMC proteins Flexible Hinge Domain ALIDE_RS11165 PF00533 BRCA1 C Terminus (BRCT) domain ALIDE_RS11165 PF01653 NAD-dependent DNA ligase adenylation domain ALIDE_RS11165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ALIDE_RS11165 PF03120 NAD-dependent DNA ligase OB-fold domain ALIDE_RS11165 PF12826 Helix-hairpin-helix motif ALIDE_RS11165 PF14520 Helix-hairpin-helix domain ALIDE_RS11170 PF01734 Patatin-like phospholipase ALIDE_RS11175 PF00905 Penicillin binding protein transpeptidase domain ALIDE_RS11175 PF00912 Transglycosylase ALIDE_RS11180 PF07690 Major Facilitator Superfamily ALIDE_RS11185 PF00293 NUDIX domain ALIDE_RS11185 PF14803 Nudix N-terminal ALIDE_RS11190 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE_RS11195 PF13417 Glutathione S-transferase, N-terminal domain ALIDE_RS11200 PF02578 Multi-copper polyphenol oxidoreductase laccase ALIDE_RS11210 PF07167 ALIDE_RS11210 ALIDE_RS11215 PF00108 Thiolase, N-terminal domain ALIDE_RS11215 PF02803 Thiolase, C-terminal domain ALIDE_RS11220 PF00106 short chain dehydrogenase ALIDE_RS11225 PF00005 ABC transporter ALIDE_RS11225 PF12848 ABC transporter ALIDE_RS11230 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS11235 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS11235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS11240 PF00501 AMP-binding enzyme ALIDE_RS11240 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS11245 PF03466 LysR substrate binding domain ALIDE_RS11250 PF05175 Methyltransferase small domain ALIDE_RS11255 PF01546 Peptidase family M20/M25/M40 ALIDE_RS11255 PF07687 Peptidase dimerisation domain ALIDE_RS11260 PF00437 Type II/IV secretion system protein ALIDE_RS11265 PF14602 Hexapeptide repeat of succinyl-transferase ALIDE_RS11265 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ALIDE_RS11270 PF00155 Aminotransferase class I and II ALIDE_RS11275 PF04060 Putative Fe-S cluster ALIDE_RS11275 PF14697 4Fe-4S dicluster domain ALIDE_RS11280 PF06850 ALIDE_RS11280 ALIDE_RS11285 PF04607 Region found in RelA / SpoT proteins ALIDE_RS11290 PF01207 Dihydrouridine synthase (Dus) ALIDE_RS11295 PF01575 MaoC like domain ALIDE_RS11300 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS11305 PF03435 Saccharopine dehydrogenase ALIDE_RS11305 PF16653 ALIDE_RS11305 ALIDE_RS11310 PF00501 AMP-binding enzyme ALIDE_RS11315 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS11315 PF07729 FCD domain ALIDE_RS11320 PF00682 HMGL-like ALIDE_RS11325 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11330 PF02515 CoA-transferase family III ALIDE_RS11335 PF01381 Helix-turn-helix ALIDE_RS11335 PF06114 Domain of unknown function (DUF955) ALIDE_RS11335 PF09856 ALIDE_RS11335 ALIDE_RS11340 PF01642 Methylmalonyl-CoA mutase ALIDE_RS11340 PF02310 B12 binding domain ALIDE_RS11345 PF03308 ArgK protein ALIDE_RS11350 PF01039 Carboxyl transferase domain ALIDE_RS11355 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS11355 PF00364 Biotin-requiring enzyme ALIDE_RS11355 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS11355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS11360 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS11365 PF04055 Radical SAM superfamily ALIDE_RS11365 PF06968 Biotin and Thiamin Synthesis associated domain ALIDE_RS11370 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11375 PF00072 Response regulator receiver domain ALIDE_RS11375 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS11380 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS11380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS11380 PF08521 ALIDE_RS11380 ALIDE_RS11385 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11390 PF02566 OsmC-like protein ALIDE_RS11395 PF00581 Rhodanese-like domain ALIDE_RS11400 PF11127 Protein of unknown function (DUF2892) ALIDE_RS11405 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS11410 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS11415 PF02321 Outer membrane efflux protein ALIDE_RS11420 PF00873 AcrB/AcrD/AcrF family ALIDE_RS11425 PF16576 ALIDE_RS11425 ALIDE_RS11430 PF01022 Bacterial regulatory protein, arsR family ALIDE_RS11440 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS11445 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS11450 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11455 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11460 PF00356 Bacterial regulatory proteins, lacI family ALIDE_RS11460 PF13377 Periplasmic binding protein-like domain ALIDE_RS11465 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS11470 PF00815 Histidinol dehydrogenase ALIDE_RS11475 PF08242 Methyltransferase domain ALIDE_RS11480 PF03942 ALIDE_RS11480 ALIDE_RS11485 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS11490 PF00884 Sulfatase ALIDE_RS11490 PF08019 ALIDE_RS11490 ALIDE_RS11495 PF01569 PAP2 superfamily ALIDE_RS11500 PF00072 Response regulator receiver domain ALIDE_RS11500 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS11505 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS11505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS11510 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS11515 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11520 PF00107 Zinc-binding dehydrogenase ALIDE_RS11520 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS11525 PF02515 CoA-transferase family III ALIDE_RS11530 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS11530 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS11530 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS11540 PF02515 CoA-transferase family III ALIDE_RS11545 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS11550 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase ALIDE_RS11550 PF13450 NAD(P)-binding Rossmann-like domain ALIDE_RS11555 PF04392 ABC transporter substrate binding protein ALIDE_RS11560 PF02653 ALIDE_RS11560 ALIDE_RS11565 PF00005 ABC transporter ALIDE_RS11570 PF00158 Sigma-54 interaction domain ALIDE_RS11570 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS11575 PF12697 Alpha/beta hydrolase family ALIDE_RS11580 PF00732 GMC oxidoreductase ALIDE_RS11580 PF05199 GMC oxidoreductase ALIDE_RS11595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE_RS11600 PF00364 Biotin-requiring enzyme ALIDE_RS11605 PF02779 Transketolase, pyrimidine binding domain ALIDE_RS11605 PF02780 Transketolase, C-terminal domain ALIDE_RS11610 PF00676 Dehydrogenase E1 component ALIDE_RS11615 PF01037 AsnC family ALIDE_RS11615 PF13404 AsnC-type helix-turn-helix domain ALIDE_RS11620 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE_RS11625 PF04290 ALIDE_RS11625 ALIDE_RS11630 PF06808 ALIDE_RS11630 ALIDE_RS11635 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS11640 PF01571 Aminomethyltransferase folate-binding domain ALIDE_RS11640 PF08669 Glycine cleavage T-protein C-terminal barrel domain ALIDE_RS11645 PF01597 Glycine cleavage H-protein ALIDE_RS11650 PF02347 Glycine cleavage system P-protein ALIDE_RS11655 PF02583 Metal-sensitive transcriptional repressor ALIDE_RS11660 PF00107 Zinc-binding dehydrogenase ALIDE_RS11660 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS11665 PF00756 Putative esterase ALIDE_RS11675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS11675 PF03466 LysR substrate binding domain ALIDE_RS11680 PF04055 Radical SAM superfamily ALIDE_RS11685 PF01272 Transcription elongation factor, GreA/GreB, C-term ALIDE_RS11685 PF14760 Rnk N-terminus ALIDE_RS11690 PF01757 ALIDE_RS11690 ALIDE_RS11695 PF03060 Nitronate monooxygenase ALIDE_RS11700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS11700 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS11700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS11700 PF12418 ALIDE_RS11700 ALIDE_RS11700 PF12806 ALIDE_RS11700 ALIDE_RS11705 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE_RS11705 PF01012 Electron transfer flavoprotein domain ALIDE_RS11710 PF01012 Electron transfer flavoprotein domain ALIDE_RS11715 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS11720 PF00850 Histone deacetylase domain ALIDE_RS11725 PF07726 ATPase family associated with various cellular activities (AAA) ALIDE_RS11730 PF01882 ALIDE_RS11730 ALIDE_RS11735 PF01841 Transglutaminase-like superfamily ALIDE_RS11735 PF11992 ALIDE_RS11735 ALIDE_RS11740 PF13406 Transglycosylase SLT domain ALIDE_RS11745 PF02779 Transketolase, pyrimidine binding domain ALIDE_RS11745 PF02780 Transketolase, C-terminal domain ALIDE_RS11750 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE_RS11755 PF06808 ALIDE_RS11755 ALIDE_RS11760 PF04290 ALIDE_RS11760 ALIDE_RS11765 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE_RS11770 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS11775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS11775 PF03466 LysR substrate binding domain ALIDE_RS11780 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE_RS11780 PF02779 Transketolase, pyrimidine binding domain ALIDE_RS11780 PF02780 Transketolase, C-terminal domain ALIDE_RS11785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE_RS11785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS11790 PF03466 LysR substrate binding domain ALIDE_RS11795 PF03601 ALIDE_RS11795 ALIDE_RS11800 PF13458 Periplasmic binding protein ALIDE_RS11805 PF10001 ALIDE_RS11805 ALIDE_RS11810 PF02687 ALIDE_RS11810 ALIDE_RS11810 PF12704 MacB-like periplasmic core domain ALIDE_RS11815 PF00005 ABC transporter ALIDE_RS11820 PF16576 ALIDE_RS11820 ALIDE_RS11825 PF02321 Outer membrane efflux protein ALIDE_RS11830 PF00814 Glycoprotease family ALIDE_RS11835 PF00571 CBS domain ALIDE_RS11840 PF06078 Bacterial protein of unknown function (DUF937) ALIDE_RS11845 PF13533 Biotin-lipoyl like ALIDE_RS11850 PF00873 AcrB/AcrD/AcrF family ALIDE_RS11855 PF02321 Outer membrane efflux protein ALIDE_RS11860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALIDE_RS11860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ALIDE_RS11860 PF04324 BFD-like [2Fe-2S] binding domain ALIDE_RS11860 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS11865 PF00355 Rieske [2Fe-2S] domain ALIDE_RS11870 PF00384 Molybdopterin oxidoreductase ALIDE_RS11870 PF01568 Molydopterin dinucleotide binding domain ALIDE_RS11870 PF04324 BFD-like [2Fe-2S] binding domain ALIDE_RS11870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS11875 PF07690 Major Facilitator Superfamily ALIDE_RS11880 PF09335 ALIDE_RS11880 ALIDE_RS11885 PF02885 Glycosyl transferase family, helical bundle domain ALIDE_RS11890 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALIDE_RS11895 PF03061 Thioesterase superfamily ALIDE_RS11900 PF03486 HI0933-like protein ALIDE_RS11905 PF05940 ALIDE_RS11905 ALIDE_RS11910 PF10006 ALIDE_RS11910 ALIDE_RS11915 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11920 PF00501 AMP-binding enzyme ALIDE_RS11920 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS11925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS11925 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS11925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS11930 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS11935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE_RS11935 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS11940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE_RS11940 PF00364 Biotin-requiring enzyme ALIDE_RS11940 PF02817 e3 binding domain ALIDE_RS11945 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS11950 PF02779 Transketolase, pyrimidine binding domain ALIDE_RS11950 PF02780 Transketolase, C-terminal domain ALIDE_RS11955 PF00676 Dehydrogenase E1 component ALIDE_RS11960 PF01575 MaoC like domain ALIDE_RS11970 PF01796 ALIDE_RS11970 ALIDE_RS11970 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) ALIDE_RS11975 PF00108 Thiolase, N-terminal domain ALIDE_RS11980 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS11980 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS11980 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS11985 PF13380 CoA binding domain ALIDE_RS11985 PF13549 ATP-grasp domain ALIDE_RS11985 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE_RS11990 PF01614 Bacterial transcriptional regulator ALIDE_RS11990 PF09339 IclR helix-turn-helix domain ALIDE_RS11995 PF01883 Domain of unknown function DUF59 ALIDE_RS12000 PF01592 NifU-like N terminal domain ALIDE_RS12005 PF00266 Aminotransferase class-V ALIDE_RS12010 PF01458 Uncharacterized protein family (UPF0051) ALIDE_RS12015 PF00005 ABC transporter ALIDE_RS12020 PF01458 Uncharacterized protein family (UPF0051) ALIDE_RS12025 PF01165 Ribosomal protein S21 ALIDE_RS12030 PF09424 Yqey-like protein ALIDE_RS12035 PF13487 HD domain ALIDE_RS12040 PF01144 Coenzyme A transferase ALIDE_RS12045 PF01144 Coenzyme A transferase ALIDE_RS12050 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS12050 PF13426 PAS domain ALIDE_RS12055 PF01757 ALIDE_RS12055 ALIDE_RS12060 PF00583 Acetyltransferase (GNAT) family ALIDE_RS12060 PF00696 Amino acid kinase family ALIDE_RS12065 PF01042 Endoribonuclease L-PSP ALIDE_RS12070 PF01266 FAD dependent oxidoreductase ALIDE_RS12075 PF01177 Asp/Glu/Hydantoin racemase ALIDE_RS12080 PF13458 Periplasmic binding protein ALIDE_RS12085 PF02653 ALIDE_RS12085 ALIDE_RS12090 PF02653 ALIDE_RS12090 ALIDE_RS12095 PF00005 ABC transporter ALIDE_RS12100 PF00005 ABC transporter ALIDE_RS12105 PF13458 Periplasmic binding protein ALIDE_RS12110 PF00701 Dihydrodipicolinate synthetase family ALIDE_RS12115 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ALIDE_RS12115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE_RS12120 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS12120 PF07729 FCD domain ALIDE_RS12125 PF01590 GAF domain ALIDE_RS12125 PF01966 HD domain ALIDE_RS12125 PF13487 HD domain ALIDE_RS12130 PF02600 Disulfide bond formation protein DsbB ALIDE_RS12135 PF00005 ABC transporter ALIDE_RS12135 PF12857 ALIDE_RS12135 ALIDE_RS12140 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS12150 PF13531 Bacterial extracellular solute-binding protein ALIDE_RS12155 PF06821 Serine hydrolase ALIDE_RS12160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS12160 PF03466 LysR substrate binding domain ALIDE_RS12165 PF02525 Flavodoxin-like fold ALIDE_RS12170 PF03358 NADPH-dependent FMN reductase ALIDE_RS12175 PF03180 NLPA lipoprotein ALIDE_RS12180 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS12185 PF00005 ABC transporter ALIDE_RS12185 PF09383 NIL domain ALIDE_RS12190 PF01124 MAPEG family ALIDE_RS12195 PF02132 RecR protein ALIDE_RS12195 PF13662 Toprim domain ALIDE_RS12200 PF02575 YbaB/EbfC DNA-binding family ALIDE_RS12205 PF12169 DNA polymerase III subunits gamma and tau domain III ALIDE_RS12205 PF12170 DNA polymerase III tau subunit V interacting with alpha ALIDE_RS12205 PF13177 DNA polymerase III, delta subunit ALIDE_RS12210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS12210 PF03459 TOBE domain ALIDE_RS12215 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ALIDE_RS12215 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ALIDE_RS12220 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS12225 PF13531 Bacterial extracellular solute-binding protein ALIDE_RS12235 PF01609 Transposase DDE domain ALIDE_RS12235 PF05598 ALIDE_RS12235 ALIDE_RS12240 PF13938 Domain of unknown function (DUF4213) ALIDE_RS12245 PF13649 Methyltransferase domain ALIDE_RS12250 PF00005 ABC transporter ALIDE_RS12255 PF01032 FecCD transport family ALIDE_RS12260 PF01497 Periplasmic binding protein ALIDE_RS12265 PF10649 ALIDE_RS12265 ALIDE_RS12270 PF00593 TonB dependent receptor ALIDE_RS12270 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS12280 PF03486 HI0933-like protein ALIDE_RS12285 PF02678 Pirin ALIDE_RS12285 PF05726 Pirin C-terminal cupin domain ALIDE_RS12290 PF02678 Pirin ALIDE_RS12290 PF05726 Pirin C-terminal cupin domain ALIDE_RS12295 PF00580 UvrD/REP helicase N-terminal domain ALIDE_RS12295 PF12705 PD-(D/E)XK nuclease superfamily ALIDE_RS12295 PF13361 UvrD-like helicase C-terminal domain ALIDE_RS12300 PF12705 PD-(D/E)XK nuclease superfamily ALIDE_RS12305 PF00085 Thioredoxin ALIDE_RS12310 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALIDE_RS12310 PF07497 Rho termination factor, RNA-binding domain ALIDE_RS12310 PF07498 Rho termination factor, N-terminal domain ALIDE_RS12315 PF01197 Ribosomal protein L31 ALIDE_RS12325 PF01554 MatE ALIDE_RS12330 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS12330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS12330 PF11808 ALIDE_RS12330 ALIDE_RS12330 PF13188 PAS domain ALIDE_RS12335 PF00072 Response regulator receiver domain ALIDE_RS12335 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS12340 PF01895 PhoU domain ALIDE_RS12345 PF00005 ABC transporter ALIDE_RS12350 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS12355 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS12360 PF12849 PBP superfamily domain ALIDE_RS12365 PF02541 Ppx/GppA phosphatase family ALIDE_RS12370 PF00300 Histidine phosphatase superfamily (branch 1) ALIDE_RS12375 PF02503 Polyphosphate kinase middle domain ALIDE_RS12375 PF13089 Polyphosphate kinase N-terminal domain ALIDE_RS12375 PF13090 Polyphosphate kinase C-terminal domain ALIDE_RS12380 PF13444 Acetyltransferase (GNAT) domain ALIDE_RS12385 PF00563 EAL domain ALIDE_RS12385 PF00990 GGDEF domain ALIDE_RS12385 PF13426 PAS domain ALIDE_RS12390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALIDE_RS12390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALIDE_RS12390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALIDE_RS12390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALIDE_RS12395 PF00809 Pterin binding enzyme ALIDE_RS12400 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS12400 PF01434 Peptidase family M41 ALIDE_RS12400 PF06480 FtsH Extracellular ALIDE_RS12405 PF01728 FtsJ-like methyltransferase ALIDE_RS12410 PF01985 CRS1 / YhbY (CRM) domain ALIDE_RS12420 PF13664 ALIDE_RS12420 ALIDE_RS12425 PF01272 Transcription elongation factor, GreA/GreB, C-term ALIDE_RS12425 PF03449 Transcription elongation factor, N-terminal ALIDE_RS12430 PF02142 MGS-like domain ALIDE_RS12430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS12430 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ALIDE_RS12435 PF00117 Glutamine amidotransferase class-I ALIDE_RS12435 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ALIDE_RS12445 PF13411 MerR HTH family regulatory protein ALIDE_RS12450 PF00216 Bacterial DNA-binding protein ALIDE_RS12455 PF01588 Putative tRNA binding domain ALIDE_RS12455 PF03147 Ferredoxin-fold anticodon binding domain ALIDE_RS12455 PF03483 B3/4 domain ALIDE_RS12455 PF03484 tRNA synthetase B5 domain ALIDE_RS12460 PF01409 tRNA synthetases class II core domain (F) ALIDE_RS12460 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ALIDE_RS12465 PF00453 Ribosomal protein L20 ALIDE_RS12470 PF01632 Ribosomal protein L35 ALIDE_RS12475 PF00707 Translation initiation factor IF-3, C-terminal domain ALIDE_RS12475 PF05198 Translation initiation factor IF-3, N-terminal domain ALIDE_RS12480 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALIDE_RS12480 PF02824 TGS domain ALIDE_RS12480 PF03129 Anticodon binding domain ALIDE_RS12480 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALIDE_RS12485 PF01272 Transcription elongation factor, GreA/GreB, C-term ALIDE_RS12485 PF13302 Acetyltransferase (GNAT) domain ALIDE_RS12485 PF14760 Rnk N-terminus ALIDE_RS12490 PF00463 Isocitrate lyase family ALIDE_RS12495 PF00892 EamA-like transporter family ALIDE_RS12500 PF02201 SWIB/MDM2 domain ALIDE_RS12505 PF04324 BFD-like [2Fe-2S] binding domain ALIDE_RS12510 PF03544 Gram-negative bacterial TonB protein C-terminal ALIDE_RS12515 PF01618 ALIDE_RS12515 ALIDE_RS12520 PF02472 Biopolymer transport protein ExbD/TolR ALIDE_RS12525 PF10636 Hemin uptake protein hemP ALIDE_RS12530 PF03928 Domain of unknown function (DUF336) ALIDE_RS12535 PF01027 Inhibitor of apoptosis-promoting Bax1 ALIDE_RS12540 PF01047 MarR family ALIDE_RS12545 PF07690 Major Facilitator Superfamily ALIDE_RS12555 PF00893 Small Multidrug Resistance protein ALIDE_RS12560 PF02417 ALIDE_RS12560 ALIDE_RS12565 PF02417 ALIDE_RS12565 ALIDE_RS12570 PF02146 Sir2 family ALIDE_RS12575 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS12575 PF13305 WHG domain ALIDE_RS12580 PF07237 Protein of unknown function (DUF1428) ALIDE_RS12585 PF04828 Glutathione-dependent formaldehyde-activating enzyme ALIDE_RS12590 PF06983 3-demethylubiquinone-9 3-methyltransferase ALIDE_RS12595 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ALIDE_RS12600 PF06983 3-demethylubiquinone-9 3-methyltransferase ALIDE_RS12610 PF08327 Activator of Hsp90 ATPase homolog 1-like protein ALIDE_RS12615 PF00588 SpoU rRNA Methylase family ALIDE_RS12615 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALIDE_RS12620 PF00375 Sodium:dicarboxylate symporter family ALIDE_RS12625 PF00005 ABC transporter ALIDE_RS12630 PF13472 GDSL-like Lipase/Acylhydrolase family ALIDE_RS12635 PF09955 ALIDE_RS12635 ALIDE_RS12640 PF01053 Cys/Met metabolism PLP-dependent enzyme ALIDE_RS12645 PF04972 BON domain ALIDE_RS12650 PF00916 ALIDE_RS12650 ALIDE_RS12650 PF01740 STAS domain ALIDE_RS12655 PF00990 GGDEF domain ALIDE_RS12660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE_RS12665 PF00501 AMP-binding enzyme ALIDE_RS12665 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS12665 PF16177 ALIDE_RS12665 ALIDE_RS12670 PF00857 Isochorismatase family ALIDE_RS12675 PF07995 Glucose / Sorbosone dehydrogenase ALIDE_RS12680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS12680 PF03466 LysR substrate binding domain ALIDE_RS12685 PF00171 Aldehyde dehydrogenase family ALIDE_RS12690 PF07007 Protein of unknown function (DUF1311) ALIDE_RS12695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS12695 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS12695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS12700 PF04993 TfoX N-terminal domain ALIDE_RS12705 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS12705 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE_RS12710 PF05050 Methyltransferase FkbM domain ALIDE_RS12720 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS12725 PF04320 ALIDE_RS12725 ALIDE_RS12730 PF04295 ALIDE_RS12730 ALIDE_RS12730 PF08666 SAF domain ALIDE_RS12735 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS12740 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ALIDE_RS12740 PF13378 Enolase C-terminal domain-like ALIDE_RS12745 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS12745 PF07729 FCD domain ALIDE_RS12750 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS12755 PF00701 Dihydrodipicolinate synthetase family ALIDE_RS12760 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS12765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE_RS12765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS12770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ALIDE_RS12770 PF13378 Enolase C-terminal domain-like ALIDE_RS12775 PF00171 Aldehyde dehydrogenase family ALIDE_RS12780 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ALIDE_RS12785 PF04376 ALIDE_RS12785 ALIDE_RS12785 PF04377 ALIDE_RS12785 ALIDE_RS12790 PF02678 Pirin ALIDE_RS12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS12795 PF03466 LysR substrate binding domain ALIDE_RS12800 PF01593 Flavin containing amine oxidoreductase ALIDE_RS12800 PF13450 NAD(P)-binding Rossmann-like domain ALIDE_RS12805 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALIDE_RS12810 PF02390 Putative methyltransferase ALIDE_RS12815 PF00990 GGDEF domain ALIDE_RS12820 PF01411 tRNA synthetases class II (A) ALIDE_RS12820 PF02272 DHHA1 domain ALIDE_RS12820 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALIDE_RS12825 PF00701 Dihydrodipicolinate synthetase family ALIDE_RS12830 PF04290 ALIDE_RS12830 ALIDE_RS12835 PF06808 ALIDE_RS12835 ALIDE_RS12840 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE_RS12845 PF02615 Malate/L-lactate dehydrogenase ALIDE_RS12850 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS12850 PF07729 FCD domain ALIDE_RS12855 PF00849 RNA pseudouridylate synthase ALIDE_RS12860 PF00583 Acetyltransferase (GNAT) family ALIDE_RS12860 PF13380 CoA binding domain ALIDE_RS12860 PF13549 ATP-grasp domain ALIDE_RS12860 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE_RS12865 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ALIDE_RS12870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALIDE_RS12870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALIDE_RS12870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALIDE_RS12870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALIDE_RS12875 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS12880 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS12885 PF04962 KduI/IolB family ALIDE_RS12890 PF00294 pfkB family carbohydrate kinase ALIDE_RS12890 PF09863 Uncharacterized protein conserved in bacteria (DUF2090) ALIDE_RS12895 PF01380 SIS domain ALIDE_RS12895 PF01418 Helix-turn-helix domain, rpiR family ALIDE_RS12900 PF00730 HhH-GPD superfamily base excision DNA repair protein ALIDE_RS12900 PF02805 Metal binding domain of Ada ALIDE_RS12900 PF06029 AlkA N-terminal domain ALIDE_RS12900 PF12833 Helix-turn-helix domain ALIDE_RS12905 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALIDE_RS12910 PF00892 EamA-like transporter family ALIDE_RS12915 PF00211 Adenylate and Guanylate cyclase catalytic domain ALIDE_RS12915 PF00498 FHA domain ALIDE_RS12920 PF02016 LD-carboxypeptidase ALIDE_RS12925 PF00561 alpha/beta hydrolase fold ALIDE_RS12925 PF14437 ALIDE_RS12925 ALIDE_RS12930 PF04299 Putative FMN-binding domain ALIDE_RS12935 PF01136 ALIDE_RS12935 ALIDE_RS12935 PF12392 ALIDE_RS12935 ALIDE_RS12940 PF01053 Cys/Met metabolism PLP-dependent enzyme ALIDE_RS12945 PF03781 Sulfatase-modifying factor enzyme 1 ALIDE_RS12945 PF12867 DinB superfamily ALIDE_RS12950 PF10017 ALIDE_RS12950 ALIDE_RS12955 PF03922 OmpW family ALIDE_RS12960 PF05661 ALIDE_RS12960 ALIDE_RS12965 PF02769 AIR synthase related protein, C-terminal domain ALIDE_RS12965 PF13507 CobB/CobQ-like glutamine amidotransferase domain ALIDE_RS12970 PF00557 Metallopeptidase family M24 ALIDE_RS12975 PF01966 HD domain ALIDE_RS12975 PF08335 GlnD PII-uridylyltransferase ALIDE_RS12975 PF13740 ACT domain ALIDE_RS12980 PF00860 Permease family ALIDE_RS12985 PF01327 Polypeptide deformylase ALIDE_RS12990 PF04304 ALIDE_RS12990 ALIDE_RS13005 PF11903 ALIDE_RS13005 ALIDE_RS13010 PF06414 Zeta toxin ALIDE_RS13015 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE_RS13020 PF02643 Uncharacterized ACR, COG1430 ALIDE_RS13025 PF03971 Monomeric isocitrate dehydrogenase ALIDE_RS13030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ALIDE_RS13030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ALIDE_RS13035 PF02601 ALIDE_RS13035 ALIDE_RS13035 PF13742 ALIDE_RS13035 ALIDE_RS13040 PF01618 ALIDE_RS13040 ALIDE_RS13045 PF02472 Biopolymer transport protein ExbD/TolR ALIDE_RS13050 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ALIDE_RS13055 PF03966 Trm112p-like protein ALIDE_RS13060 PF02348 Cytidylyltransferase ALIDE_RS13065 PF00406 Adenylate kinase ALIDE_RS13065 PF05191 Adenylate kinase, active site lid ALIDE_RS13070 PF00710 Asparaginase ALIDE_RS13075 PF00717 Peptidase S24-like ALIDE_RS13075 PF01726 LexA DNA binding domain ALIDE_RS13085 PF00270 DEAD/DEAH box helicase ALIDE_RS13085 PF00271 Helicase conserved C-terminal domain ALIDE_RS13085 PF04408 Helicase associated domain (HA2) ALIDE_RS13085 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ALIDE_RS13085 PF11898 ALIDE_RS13085 ALIDE_RS13090 PF00108 Thiolase, N-terminal domain ALIDE_RS13090 PF02803 Thiolase, C-terminal domain ALIDE_RS13095 PF00501 AMP-binding enzyme ALIDE_RS13095 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS13100 PF02632 BioY family ALIDE_RS13105 PF02361 Cobalt transport protein ALIDE_RS13110 PF00005 ABC transporter ALIDE_RS13120 PF13441 ALIDE_RS13120 ALIDE_RS13125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS13130 PF01926 50S ribosome-binding GTPase ALIDE_RS13135 PF01926 50S ribosome-binding GTPase ALIDE_RS13140 PF07690 Major Facilitator Superfamily ALIDE_RS13145 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS13150 PF02426 Muconolactone delta-isomerase ALIDE_RS13155 PF00561 alpha/beta hydrolase fold ALIDE_RS13155 PF08386 TAP-like protein ALIDE_RS13160 PF00106 short chain dehydrogenase ALIDE_RS13165 PF00775 Dioxygenase ALIDE_RS13165 PF04444 Catechol dioxygenase N terminus ALIDE_RS13170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ALIDE_RS13170 PF13378 Enolase C-terminal domain-like ALIDE_RS13175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13175 PF03466 LysR substrate binding domain ALIDE_RS13180 PF01081 KDPG and KHG aldolase ALIDE_RS13185 PF00920 Dehydratase family ALIDE_RS13190 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE_RS13195 PF06808 ALIDE_RS13195 ALIDE_RS13200 PF04290 ALIDE_RS13200 ALIDE_RS13205 PF01202 Shikimate kinase ALIDE_RS13210 PF00356 Bacterial regulatory proteins, lacI family ALIDE_RS13210 PF13377 Periplasmic binding protein-like domain ALIDE_RS13215 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS13215 PF02861 Clp amino terminal domain ALIDE_RS13215 PF07724 AAA domain (Cdc48 subfamily) ALIDE_RS13215 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE_RS13220 PF02617 ATP-dependent Clp protease adaptor protein ClpS ALIDE_RS13225 PF02811 PHP domain ALIDE_RS13225 PF07733 Bacterial DNA polymerase III alpha subunit ALIDE_RS13225 PF14579 Helix-hairpin-helix motif ALIDE_RS13230 PF13525 Outer membrane lipoprotein ALIDE_RS13235 PF06733 DEAD_2 ALIDE_RS13235 PF13307 Helicase C-terminal domain ALIDE_RS13240 PF13672 Protein phosphatase 2C ALIDE_RS13250 PF03969 AFG1-like ATPase ALIDE_RS13255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE_RS13255 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS13260 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE_RS13260 PF00364 Biotin-requiring enzyme ALIDE_RS13260 PF02817 e3 binding domain ALIDE_RS13265 PF00676 Dehydrogenase E1 component ALIDE_RS13265 PF02779 Transketolase, pyrimidine binding domain ALIDE_RS13265 PF16078 ALIDE_RS13265 ALIDE_RS13265 PF16870 ALIDE_RS13265 ALIDE_RS13270 PF01594 ALIDE_RS13270 ALIDE_RS13275 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS13285 PF07287 ALIDE_RS13285 ALIDE_RS13290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13290 PF03466 LysR substrate binding domain ALIDE_RS13295 PF00582 Universal stress protein family ALIDE_RS13300 PF00005 ABC transporter ALIDE_RS13300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE_RS13305 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS13305 PF12911 ALIDE_RS13305 ALIDE_RS13310 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS13315 PF04191 Phospholipid methyltransferase ALIDE_RS13320 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE_RS13325 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS13330 PF00892 EamA-like transporter family ALIDE_RS13335 PF04325 Protein of unknown function (DUF465) ALIDE_RS13340 PF14743 DNA ligase OB-like domain ALIDE_RS13345 PF03741 ALIDE_RS13345 ALIDE_RS13350 PF01276 Orn/Lys/Arg decarboxylase, major domain ALIDE_RS13350 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ALIDE_RS13350 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ALIDE_RS13360 PF01145 SPFH domain / Band 7 family ALIDE_RS13360 PF16200 ALIDE_RS13360 ALIDE_RS13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13365 PF03466 LysR substrate binding domain ALIDE_RS13370 PF00205 Thiamine pyrophosphate enzyme, central domain ALIDE_RS13370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE_RS13370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALIDE_RS13380 PF02694 ALIDE_RS13380 ALIDE_RS13385 PF00589 Phage integrase family ALIDE_RS13390 PF03358 NADPH-dependent FMN reductase ALIDE_RS13395 PF00122 E1-E2 ATPase ALIDE_RS13395 PF00689 Cation transporting ATPase, C-terminus ALIDE_RS13395 PF00690 Cation transporter/ATPase, N-terminus ALIDE_RS13395 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS13400 PF04542 Sigma-70 region 2 ALIDE_RS13400 PF08281 Sigma-70, region 4 ALIDE_RS13410 PF03773 ALIDE_RS13410 ALIDE_RS13415 PF13192 Thioredoxin domain ALIDE_RS13420 PF02566 OsmC-like protein ALIDE_RS13425 PF01545 Cation efflux family ALIDE_RS13435 PF13230 Glutamine amidotransferases class-II ALIDE_RS13440 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS13440 PF00970 Oxidoreductase FAD-binding domain ALIDE_RS13440 PF12838 4Fe-4S dicluster domain ALIDE_RS13445 PF00108 Thiolase, N-terminal domain ALIDE_RS13445 PF02803 Thiolase, C-terminal domain ALIDE_RS13450 PF10982 Protein of unknown function (DUF2789) ALIDE_RS13455 PF13192 Thioredoxin domain ALIDE_RS13460 PF03773 ALIDE_RS13460 ALIDE_RS13470 PF00665 Integrase core domain ALIDE_RS13470 PF13276 ALIDE_RS13470 ALIDE_RS13475 PF01527 Transposase ALIDE_RS13480 PF01131 DNA topoisomerase ALIDE_RS13480 PF01396 ALIDE_RS13480 ALIDE_RS13480 PF01751 Toprim domain ALIDE_RS13485 PF00436 Single-strand binding protein family ALIDE_RS13490 PF11358 ALIDE_RS13490 ALIDE_RS13495 PF08900 ALIDE_RS13495 ALIDE_RS13505 PF11198 ALIDE_RS13505 ALIDE_RS13520 PF13614 AAA domain ALIDE_RS13525 PF05930 Prophage CP4-57 regulatory protein (AlpA) ALIDE_RS13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13535 PF03466 LysR substrate binding domain ALIDE_RS13540 PF00873 AcrB/AcrD/AcrF family ALIDE_RS13545 PF11604 Copper binding periplasmic protein CusF ALIDE_RS13545 PF16576 ALIDE_RS13545 ALIDE_RS13550 PF02321 Outer membrane efflux protein ALIDE_RS13565 PF00122 E1-E2 ATPase ALIDE_RS13565 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS13570 PF11339 ALIDE_RS13570 ALIDE_RS13575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS13580 PF04191 Phospholipid methyltransferase ALIDE_RS13585 PF11666 ALIDE_RS13585 ALIDE_RS13595 PF11604 Copper binding periplasmic protein CusF ALIDE_RS13600 PF00127 Copper binding proteins, plastocyanin/azurin family ALIDE_RS13605 PF05275 ALIDE_RS13605 ALIDE_RS13610 PF00394 Multicopper oxidase ALIDE_RS13610 PF07731 Multicopper oxidase ALIDE_RS13610 PF07732 Multicopper oxidase ALIDE_RS13615 PF00072 Response regulator receiver domain ALIDE_RS13615 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS13620 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS13620 PF00672 HAMP domain ALIDE_RS13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS13625 PF13663 ALIDE_RS13625 ALIDE_RS13630 PF07731 Multicopper oxidase ALIDE_RS13630 PF07732 Multicopper oxidase ALIDE_RS13635 PF01527 Transposase ALIDE_RS13640 PF00665 Integrase core domain ALIDE_RS13640 PF13276 ALIDE_RS13640 ALIDE_RS13650 PF00892 EamA-like transporter family ALIDE_RS13655 PF00122 E1-E2 ATPase ALIDE_RS13655 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS13660 PF02583 Metal-sensitive transcriptional repressor ALIDE_RS13665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13665 PF03466 LysR substrate binding domain ALIDE_RS13670 PF01381 Helix-turn-helix ALIDE_RS13675 PF00216 Bacterial DNA-binding protein ALIDE_RS13685 PF05099 Tellurite resistance protein TerB ALIDE_RS13690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13690 PF03466 LysR substrate binding domain ALIDE_RS13695 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE_RS13700 PF01734 Patatin-like phospholipase ALIDE_RS13705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13705 PF03466 LysR substrate binding domain ALIDE_RS13710 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS13715 PF04295 ALIDE_RS13715 ALIDE_RS13715 PF08666 SAF domain ALIDE_RS13720 PF00171 Aldehyde dehydrogenase family ALIDE_RS13725 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS13730 PF06080 ALIDE_RS13730 ALIDE_RS13735 PF01177 Asp/Glu/Hydantoin racemase ALIDE_RS13740 PF05013 N-formylglutamate amidohydrolase ALIDE_RS13745 PF01979 Amidohydrolase family ALIDE_RS13750 PF01979 Amidohydrolase family ALIDE_RS13755 PF05962 HutD ALIDE_RS13760 PF00005 ABC transporter ALIDE_RS13765 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS13770 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS13775 PF01614 Bacterial transcriptional regulator ALIDE_RS13775 PF09339 IclR helix-turn-helix domain ALIDE_RS13780 PF01175 Urocanase ALIDE_RS13785 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ALIDE_RS13790 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS13790 PF07702 UTRA domain ALIDE_RS13795 PF00221 Aromatic amino acid lyase ALIDE_RS13800 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS13800 PF07702 UTRA domain ALIDE_RS13805 PF00005 ABC transporter ALIDE_RS13810 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS13815 PF09084 NMT1/THI5 like ALIDE_RS13820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS13820 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS13820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS13825 PF02515 CoA-transferase family III ALIDE_RS13830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13830 PF03466 LysR substrate binding domain ALIDE_RS13835 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS13840 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS13845 PF00682 HMGL-like ALIDE_RS13850 PF02515 CoA-transferase family III ALIDE_RS13855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS13855 PF03466 LysR substrate binding domain ALIDE_RS13860 PF10093 ALIDE_RS13860 ALIDE_RS13865 PF01132 Elongation factor P (EF-P) OB domain ALIDE_RS13865 PF08207 Elongation factor P (EF-P) KOW-like domain ALIDE_RS13865 PF09285 Elongation factor P, C-terminal ALIDE_RS13875 PF00474 Sodium:solute symporter family ALIDE_RS13880 PF13937 ALIDE_RS13880 ALIDE_RS13885 PF00391 PEP-utilising enzyme, mobile domain ALIDE_RS13885 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ALIDE_RS13885 PF02896 PEP-utilising enzyme, TIM barrel domain ALIDE_RS13890 PF03618 ALIDE_RS13890 ALIDE_RS13895 PF00873 AcrB/AcrD/AcrF family ALIDE_RS13900 PF16576 ALIDE_RS13900 ALIDE_RS13910 PF02321 Outer membrane efflux protein ALIDE_RS13920 PF00199 Catalase ALIDE_RS13920 PF06628 Catalase-related immune-responsive ALIDE_RS13925 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS13925 PF13192 Thioredoxin domain ALIDE_RS13930 PF00578 AhpC/TSA family ALIDE_RS13930 PF10417 C-terminal domain of 1-Cys peroxiredoxin ALIDE_RS13935 PF00210 Ferritin-like domain ALIDE_RS13940 PF05247 Flagellar transcriptional activator (FlhD) ALIDE_RS13945 PF05280 Flagellar transcriptional activator (FlhC) ALIDE_RS13950 PF00311 Phosphoenolpyruvate carboxylase ALIDE_RS13955 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ALIDE_RS13955 PF03900 Porphobilinogen deaminase, C-terminal domain ALIDE_RS13960 PF02602 Uroporphyrinogen-III synthase HemD ALIDE_RS13965 PF04375 ALIDE_RS13965 ALIDE_RS13970 PF07219 ALIDE_RS13970 ALIDE_RS13975 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE_RS13980 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO ALIDE_RS13985 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS13990 PF02630 SCO1/SenC ALIDE_RS14000 PF00133 tRNA synthetases class I (I, L, M and V) ALIDE_RS14000 PF08264 Anticodon-binding domain of tRNA ALIDE_RS14000 PF10458 Valyl tRNA synthetase tRNA binding arm ALIDE_RS14005 PF00483 Nucleotidyl transferase ALIDE_RS14010 PF01206 Sulfurtransferase TusA ALIDE_RS14015 PF00293 NUDIX domain ALIDE_RS14015 PF14803 Nudix N-terminal ALIDE_RS14020 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS14025 PF10038 ALIDE_RS14025 ALIDE_RS14030 PF03743 Bacterial conjugation TrbI-like protein ALIDE_RS14035 PF03524 Conjugal transfer protein ALIDE_RS14040 PF04335 VirB8 protein ALIDE_RS14045 PF04610 ALIDE_RS14045 ALIDE_RS14060 PF03135 ALIDE_RS14060 ALIDE_RS14065 PF05101 ALIDE_RS14065 ALIDE_RS14070 PF04956 ALIDE_RS14070 ALIDE_RS14075 PF00437 Type II/IV secretion system protein ALIDE_RS14080 PF01402 Ribbon-helix-helix protein, copG family ALIDE_RS14085 PF02534 Type IV secretory system Conjugative DNA transfer ALIDE_RS14095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS14095 PF03466 LysR substrate binding domain ALIDE_RS14100 PF12697 Alpha/beta hydrolase family ALIDE_RS14105 PF01515 Phosphate acetyl/butaryl transferase ALIDE_RS14110 PF00582 Universal stress protein family ALIDE_RS14115 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS14125 PF07167 ALIDE_RS14125 ALIDE_RS14130 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS14130 PF08359 YsiA-like protein, C-terminal region ALIDE_RS14140 PF16576 ALIDE_RS14140 ALIDE_RS14145 PF00005 ABC transporter ALIDE_RS14150 PF12698 ABC-2 family transporter protein ALIDE_RS14155 PF12698 ABC-2 family transporter protein ALIDE_RS14160 PF02321 Outer membrane efflux protein ALIDE_RS14165 PF00465 Iron-containing alcohol dehydrogenase ALIDE_RS14170 PF11127 Protein of unknown function (DUF2892) ALIDE_RS14175 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS14175 PF07521 RNA-metabolising metallo-beta-lactamase ALIDE_RS14175 PF10996 Beta-Casp domain ALIDE_RS14180 PF03641 Possible lysine decarboxylase ALIDE_RS14185 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) ALIDE_RS14190 PF01322 Cytochrome C' ALIDE_RS14195 PF00871 Acetokinase family ALIDE_RS14200 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ALIDE_RS14200 PF09364 XFP N-terminal domain ALIDE_RS14205 PF11843 ALIDE_RS14205 ALIDE_RS14215 PF13801 Heavy-metal resistance ALIDE_RS14220 PF13490 Putative zinc-finger ALIDE_RS14225 PF04542 Sigma-70 region 2 ALIDE_RS14225 PF08281 Sigma-70, region 4 ALIDE_RS14230 PF13670 ALIDE_RS14230 ALIDE_RS14235 PF10029 ALIDE_RS14235 ALIDE_RS14240 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS14240 PF00258 Flavodoxin ALIDE_RS14240 PF00970 Oxidoreductase FAD-binding domain ALIDE_RS14240 PF03929 ALIDE_RS14240 ALIDE_RS14245 PF02424 ApbE family ALIDE_RS14255 PF01292 Prokaryotic cytochrome b561 ALIDE_RS14260 PF00027 Cyclic nucleotide-binding domain ALIDE_RS14260 PF13545 Crp-like helix-turn-helix domain ALIDE_RS14265 PF00403 Heavy-metal-associated domain ALIDE_RS14270 PF00122 E1-E2 ATPase ALIDE_RS14270 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS14275 PF11843 ALIDE_RS14275 ALIDE_RS14280 PF10502 Signal peptidase, peptidase S26 ALIDE_RS14285 PF11000 ALIDE_RS14285 ALIDE_RS14295 PF00665 Integrase core domain ALIDE_RS14295 PF13276 ALIDE_RS14295 ALIDE_RS14300 PF01527 Transposase ALIDE_RS14315 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS14320 PF08359 YsiA-like protein, C-terminal region ALIDE_RS14325 PF00501 AMP-binding enzyme ALIDE_RS14325 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS14330 PF00682 HMGL-like ALIDE_RS14335 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS14335 PF00364 Biotin-requiring enzyme ALIDE_RS14335 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS14335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS14340 PF01039 Carboxyl transferase domain ALIDE_RS14345 PF00501 AMP-binding enzyme ALIDE_RS14350 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS14355 PF13458 Periplasmic binding protein ALIDE_RS14360 PF13616 PPIC-type PPIASE domain ALIDE_RS14360 PF13624 SurA N-terminal domain ALIDE_RS14370 PF00216 Bacterial DNA-binding protein ALIDE_RS14375 PF01066 CDP-alcohol phosphatidyltransferase ALIDE_RS14380 PF01541 GIY-YIG catalytic domain ALIDE_RS14380 PF02151 UvrB/uvrC motif ALIDE_RS14380 PF08459 UvrC Helix-hairpin-helix N-terminal ALIDE_RS14380 PF14520 Helix-hairpin-helix domain ALIDE_RS14400 PF07690 Major Facilitator Superfamily ALIDE_RS14405 PF00816 H-NS histone family ALIDE_RS14410 PF01614 Bacterial transcriptional regulator ALIDE_RS14410 PF09339 IclR helix-turn-helix domain ALIDE_RS14415 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS14420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS14420 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS14420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS14425 PF00501 AMP-binding enzyme ALIDE_RS14425 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS14430 PF13458 Periplasmic binding protein ALIDE_RS14435 PF00005 ABC transporter ALIDE_RS14440 PF00005 ABC transporter ALIDE_RS14440 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS14445 PF02653 ALIDE_RS14445 ALIDE_RS14450 PF02653 ALIDE_RS14450 ALIDE_RS14455 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS14460 PF13609 Gram-negative porin ALIDE_RS14465 PF05977 Transmembrane secretion effector ALIDE_RS14470 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS14475 PF00171 Aldehyde dehydrogenase family ALIDE_RS14480 PF00171 Aldehyde dehydrogenase family ALIDE_RS14485 PF03972 MmgE/PrpD family ALIDE_RS14490 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS14500 PF00171 Aldehyde dehydrogenase family ALIDE_RS14505 PF00107 Zinc-binding dehydrogenase ALIDE_RS14505 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS14510 PF13458 Periplasmic binding protein ALIDE_RS14515 PF02653 ALIDE_RS14515 ALIDE_RS14520 PF02653 ALIDE_RS14520 ALIDE_RS14525 PF00005 ABC transporter ALIDE_RS14525 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS14530 PF00005 ABC transporter ALIDE_RS14535 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase ALIDE_RS14535 PF13450 NAD(P)-binding Rossmann-like domain ALIDE_RS14540 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS14545 PF02515 CoA-transferase family III ALIDE_RS14550 PF13452 N-terminal half of MaoC dehydratase ALIDE_RS14555 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE_RS14555 PF01012 Electron transfer flavoprotein domain ALIDE_RS14560 PF01012 Electron transfer flavoprotein domain ALIDE_RS14565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS14565 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS14565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS14570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS14570 PF03466 LysR substrate binding domain ALIDE_RS14575 PF03972 MmgE/PrpD family ALIDE_RS14580 PF02515 CoA-transferase family III ALIDE_RS14585 PF01614 Bacterial transcriptional regulator ALIDE_RS14585 PF09339 IclR helix-turn-helix domain ALIDE_RS14590 PF00501 AMP-binding enzyme ALIDE_RS14590 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS14590 PF16177 ALIDE_RS14590 ALIDE_RS14595 PF00108 Thiolase, N-terminal domain ALIDE_RS14595 PF02803 Thiolase, C-terminal domain ALIDE_RS14600 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS14605 PF01575 MaoC like domain ALIDE_RS14605 PF13452 N-terminal half of MaoC dehydratase ALIDE_RS14610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS14610 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS14610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS14615 PF12697 Alpha/beta hydrolase family ALIDE_RS14620 PF01614 Bacterial transcriptional regulator ALIDE_RS14620 PF09339 IclR helix-turn-helix domain ALIDE_RS14625 PF01614 Bacterial transcriptional regulator ALIDE_RS14625 PF09339 IclR helix-turn-helix domain ALIDE_RS14630 PF03972 MmgE/PrpD family ALIDE_RS14635 PF11136 ALIDE_RS14635 ALIDE_RS14640 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS14645 PF00732 GMC oxidoreductase ALIDE_RS14645 PF05199 GMC oxidoreductase ALIDE_RS14650 PF00171 Aldehyde dehydrogenase family ALIDE_RS14655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS14655 PF03466 LysR substrate binding domain ALIDE_RS14660 PF02515 CoA-transferase family III ALIDE_RS14665 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS14670 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS14675 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS14685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS14685 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS14685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS14690 PF01575 MaoC like domain ALIDE_RS14695 PF07287 ALIDE_RS14695 ALIDE_RS14705 PF00108 Thiolase, N-terminal domain ALIDE_RS14705 PF02803 Thiolase, C-terminal domain ALIDE_RS14710 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS14715 PF02515 CoA-transferase family III ALIDE_RS14720 PF02515 CoA-transferase family III ALIDE_RS14730 PF02515 CoA-transferase family III ALIDE_RS14735 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS14740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS14740 PF03466 LysR substrate binding domain ALIDE_RS14745 PF03972 MmgE/PrpD family ALIDE_RS14750 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS14755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ALIDE_RS14755 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE_RS14760 PF00005 ABC transporter ALIDE_RS14765 PF00005 ABC transporter ALIDE_RS14765 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS14770 PF02653 ALIDE_RS14770 ALIDE_RS14775 PF02653 ALIDE_RS14775 ALIDE_RS14780 PF13458 Periplasmic binding protein ALIDE_RS14785 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS14790 PF00881 Nitroreductase family ALIDE_RS14795 PF13474 SnoaL-like domain ALIDE_RS14800 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS14805 PF02515 CoA-transferase family III ALIDE_RS14810 PF02515 CoA-transferase family III ALIDE_RS14815 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS14815 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS14815 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS14820 PF01575 MaoC like domain ALIDE_RS14825 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS14830 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS14845 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS14845 PF02190 ATP-dependent protease La (LON) domain ALIDE_RS14845 PF05362 Lon protease (S16) C-terminal proteolytic domain ALIDE_RS14850 PF06689 ClpX C4-type zinc finger ALIDE_RS14850 PF07724 AAA domain (Cdc48 subfamily) ALIDE_RS14850 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE_RS14855 PF00574 Clp protease ALIDE_RS14860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE_RS14860 PF05697 Bacterial trigger factor protein (TF) ALIDE_RS14860 PF05698 Bacterial trigger factor protein (TF) C-terminus ALIDE_RS14870 PF00873 AcrB/AcrD/AcrF family ALIDE_RS14875 PF16576 ALIDE_RS14875 ALIDE_RS14880 PF00494 Squalene/phytoene synthase ALIDE_RS14885 PF00494 Squalene/phytoene synthase ALIDE_RS14890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS14890 PF00672 HAMP domain ALIDE_RS14890 PF02203 Tar ligand binding domain homologue ALIDE_RS14895 PF01593 Flavin containing amine oxidoreductase ALIDE_RS14900 PF11067 ALIDE_RS14900 ALIDE_RS14900 PF11981 ALIDE_RS14900 ALIDE_RS14905 PF03631 ALIDE_RS14905 ALIDE_RS14910 PF09842 ALIDE_RS14910 ALIDE_RS14915 PF01565 FAD binding domain ALIDE_RS14915 PF02913 FAD linked oxidases, C-terminal domain ALIDE_RS14920 PF00303 Thymidylate synthase ALIDE_RS14925 PF00186 Dihydrofolate reductase ALIDE_RS14930 PF11445 ALIDE_RS14930 ALIDE_RS14935 PF00691 OmpA family ALIDE_RS14940 PF05650 ALIDE_RS14940 ALIDE_RS14945 PF11828 ALIDE_RS14945 ALIDE_RS14950 PF01609 Transposase DDE domain ALIDE_RS14955 PF13340 ALIDE_RS14955 ALIDE_RS14960 PF00072 Response regulator receiver domain ALIDE_RS14960 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS14965 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS14965 PF00582 Universal stress protein family ALIDE_RS14965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS14965 PF02702 Osmosensitive K+ channel His kinase sensor domain ALIDE_RS14965 PF13493 Domain of unknown function (DUF4118) ALIDE_RS14970 PF02669 ALIDE_RS14970 ALIDE_RS14975 PF00122 E1-E2 ATPase ALIDE_RS14975 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS14980 PF03814 ALIDE_RS14980 ALIDE_RS14990 PF03372 Endonuclease/Exonuclease/phosphatase family ALIDE_RS14995 PF00072 Response regulator receiver domain ALIDE_RS14995 PF00158 Sigma-54 interaction domain ALIDE_RS14995 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS15000 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS15000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS15010 PF00120 Glutamine synthetase, catalytic domain ALIDE_RS15010 PF03951 Glutamine synthetase, beta-Grasp domain ALIDE_RS15015 PF00994 Probable molybdopterin binding domain ALIDE_RS15020 PF07264 Etoposide-induced protein 2 ALIDE_RS15025 PF04116 ALIDE_RS15025 ALIDE_RS15030 PF01522 Polysaccharide deacetylase ALIDE_RS15035 PF02239 Cytochrome D1 heme domain ALIDE_RS15040 PF00849 RNA pseudouridylate synthase ALIDE_RS15070 PF00156 Phosphoribosyl transferase domain ALIDE_RS15075 PF00709 Adenylosuccinate synthetase ALIDE_RS15080 PF13393 Histidyl-tRNA synthetase ALIDE_RS15085 PF09838 ALIDE_RS15085 ALIDE_RS15090 PF01145 SPFH domain / Band 7 family ALIDE_RS15095 PF01145 SPFH domain / Band 7 family ALIDE_RS15095 PF12221 ALIDE_RS15095 ALIDE_RS15100 PF01926 50S ribosome-binding GTPase ALIDE_RS15100 PF13167 ALIDE_RS15100 ALIDE_RS15100 PF16360 ALIDE_RS15100 ALIDE_RS15110 PF01926 50S ribosome-binding GTPase ALIDE_RS15110 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ALIDE_RS15115 PF13360 PQQ-like domain ALIDE_RS15120 PF09976 Tetratricopeptide repeat ALIDE_RS15125 PF03129 Anticodon binding domain ALIDE_RS15125 PF13393 Histidyl-tRNA synthetase ALIDE_RS15130 PF04551 GcpE protein ALIDE_RS15135 PF13413 Helix-turn-helix domain ALIDE_RS15135 PF13464 ALIDE_RS15135 ALIDE_RS15140 PF13432 Tetratricopeptide repeat ALIDE_RS15140 PF14559 Tetratricopeptide repeat ALIDE_RS15145 PF04055 Radical SAM superfamily ALIDE_RS15150 PF00334 Nucleoside diphosphate kinase ALIDE_RS15155 PF00849 RNA pseudouridylate synthase ALIDE_RS15155 PF01479 S4 domain ALIDE_RS15160 PF04079 Putative transcriptional regulators (Ypuh-like) ALIDE_RS15165 PF00849 RNA pseudouridylate synthase ALIDE_RS15165 PF01479 S4 domain ALIDE_RS15170 PF01476 LysM domain ALIDE_RS15170 PF01551 Peptidase family M23 ALIDE_RS15175 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) ALIDE_RS15180 PF01975 Survival protein SurE ALIDE_RS15185 PF00990 GGDEF domain ALIDE_RS15190 PF09423 PhoD-like phosphatase ALIDE_RS15190 PF16655 ALIDE_RS15190 ALIDE_RS15195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS15195 PF03466 LysR substrate binding domain ALIDE_RS15200 PF01070 FMN-dependent dehydrogenase ALIDE_RS15205 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS15220 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE_RS15225 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS15230 PF00488 MutS domain V ALIDE_RS15230 PF01624 MutS domain I ALIDE_RS15230 PF05188 MutS domain II ALIDE_RS15230 PF05190 MutS family domain IV ALIDE_RS15230 PF05192 MutS domain III ALIDE_RS15235 PF02321 Outer membrane efflux protein ALIDE_RS15240 PF00873 AcrB/AcrD/AcrF family ALIDE_RS15245 PF00873 AcrB/AcrD/AcrF family ALIDE_RS15250 PF16576 ALIDE_RS15250 ALIDE_RS15255 PF12697 Alpha/beta hydrolase family ALIDE_RS15260 PF02673 ALIDE_RS15260 ALIDE_RS15270 PF13239 ALIDE_RS15270 ALIDE_RS15275 PF06580 ALIDE_RS15275 ALIDE_RS15280 PF00072 Response regulator receiver domain ALIDE_RS15280 PF04397 LytTr DNA-binding domain ALIDE_RS15285 PF07690 Major Facilitator Superfamily ALIDE_RS15290 PF07690 Major Facilitator Superfamily ALIDE_RS15295 PF01494 FAD binding domain ALIDE_RS15300 PF00330 Aconitase family (aconitate hydratase) ALIDE_RS15300 PF00694 Aconitase C-terminal domain ALIDE_RS15305 PF00816 H-NS histone family ALIDE_RS15310 PF00149 Calcineurin-like phosphoesterase ALIDE_RS15315 PF02424 ApbE family ALIDE_RS15320 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS15330 PF13473 Cupredoxin-like domain ALIDE_RS15335 PF04205 FMN-binding domain ALIDE_RS15335 PF12801 ALIDE_RS15335 ALIDE_RS15340 PF05048 Periplasmic copper-binding protein (NosD) ALIDE_RS15345 PF00005 ABC transporter ALIDE_RS15350 PF12679 ALIDE_RS15350 ALIDE_RS15355 PF05573 NosL ALIDE_RS15360 PF05573 NosL ALIDE_RS15365 PF00270 DEAD/DEAH box helicase ALIDE_RS15365 PF00271 Helicase conserved C-terminal domain ALIDE_RS15370 PF04228 ALIDE_RS15370 ALIDE_RS15375 PF00692 dUTPase ALIDE_RS15380 PF06181 ALIDE_RS15380 ALIDE_RS15385 PF02625 XdhC and CoxI family ALIDE_RS15385 PF13478 XdhC Rossmann domain ALIDE_RS15395 PF00576 HIUase/Transthyretin family ALIDE_RS15400 PF01019 Gamma-glutamyltranspeptidase ALIDE_RS15410 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS15410 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE_RS15415 PF01261 Xylose isomerase-like TIM barrel ALIDE_RS15420 PF00205 Thiamine pyrophosphate enzyme, central domain ALIDE_RS15420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE_RS15420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALIDE_RS15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS15425 PF03466 LysR substrate binding domain ALIDE_RS15430 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS15435 PF00202 Aminotransferase class-III ALIDE_RS15440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS15440 PF03466 LysR substrate binding domain ALIDE_RS15445 PF05161 MOFRL family ALIDE_RS15445 PF13660 Domain of unknown function (DUF4147) ALIDE_RS15450 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS15455 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE_RS15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS15460 PF03466 LysR substrate binding domain ALIDE_RS15465 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS15465 PF07729 FCD domain ALIDE_RS15470 PF01522 Polysaccharide deacetylase ALIDE_RS15475 PF01546 Peptidase family M20/M25/M40 ALIDE_RS15475 PF09349 OHCU decarboxylase ALIDE_RS15480 PF01546 Peptidase family M20/M25/M40 ALIDE_RS15480 PF07687 Peptidase dimerisation domain ALIDE_RS15485 PF00563 EAL domain ALIDE_RS15500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS15505 PF00860 Permease family ALIDE_RS15510 PF00390 Malic enzyme, N-terminal domain ALIDE_RS15510 PF01515 Phosphate acetyl/butaryl transferase ALIDE_RS15510 PF03949 Malic enzyme, NAD binding domain ALIDE_RS15515 PF04264 YceI-like domain ALIDE_RS15520 PF04264 YceI-like domain ALIDE_RS15525 PF01292 Prokaryotic cytochrome b561 ALIDE_RS15530 PF11813 ALIDE_RS15530 ALIDE_RS15535 PF00578 AhpC/TSA family ALIDE_RS15540 PF02562 PhoH-like protein ALIDE_RS15540 PF13638 PIN domain ALIDE_RS15545 PF00171 Aldehyde dehydrogenase family ALIDE_RS15550 PF00772 DnaB-like helicase N terminal domain ALIDE_RS15550 PF03796 DnaB-like helicase C terminal domain ALIDE_RS15555 PF01281 Ribosomal protein L9, N-terminal domain ALIDE_RS15555 PF03948 Ribosomal protein L9, C-terminal domain ALIDE_RS15560 PF01084 Ribosomal protein S18 ALIDE_RS15570 PF01250 Ribosomal protein S6 ALIDE_RS15575 PF01025 GrpE ALIDE_RS15580 PF00012 Hsp70 protein ALIDE_RS15585 PF00226 DnaJ domain ALIDE_RS15585 PF00684 DnaJ central domain ALIDE_RS15585 PF01556 DnaJ C terminal domain ALIDE_RS15590 PF07589 ALIDE_RS15590 ALIDE_RS15595 PF01212 Beta-eliminating lyase ALIDE_RS15600 PF01136 ALIDE_RS15600 ALIDE_RS15605 PF01136 ALIDE_RS15605 ALIDE_RS15610 PF02036 SCP-2 sterol transfer family ALIDE_RS15615 PF08859 ALIDE_RS15615 ALIDE_RS15620 PF02441 Flavoprotein ALIDE_RS15625 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ALIDE_RS15630 PF00067 Cytochrome P450 ALIDE_RS15635 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS15635 PF07521 RNA-metabolising metallo-beta-lactamase ALIDE_RS15635 PF10996 Beta-Casp domain ALIDE_RS15640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS15640 PF03466 LysR substrate binding domain ALIDE_RS15645 PF00330 Aconitase family (aconitate hydratase) ALIDE_RS15650 PF08085 ALIDE_RS15650 ALIDE_RS15655 PF00694 Aconitase C-terminal domain ALIDE_RS15660 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE_RS15665 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALIDE_RS15665 PF02774 Semialdehyde dehydrogenase, dimerisation domain ALIDE_RS15675 PF01416 tRNA pseudouridine synthase ALIDE_RS15680 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ALIDE_RS15685 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS15690 PF00290 Tryptophan synthase alpha chain ALIDE_RS15695 PF01039 Carboxyl transferase domain ALIDE_RS15700 PF02325 ALIDE_RS15700 ALIDE_RS15705 PF02190 ATP-dependent protease La (LON) domain ALIDE_RS15710 PF02719 Polysaccharide biosynthesis protein ALIDE_RS15710 PF13727 CoA-binding domain ALIDE_RS15715 PF13440 ALIDE_RS15715 ALIDE_RS15720 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE_RS15725 PF13477 Glycosyl transferase 4-like ALIDE_RS15725 PF13692 Glycosyl transferases group 1 ALIDE_RS15730 PF00535 Glycosyl transferase family 2 ALIDE_RS15735 PF13649 Methyltransferase domain ALIDE_RS15740 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALIDE_RS15745 PF02397 ALIDE_RS15745 ALIDE_RS15750 PF00152 tRNA synthetases class II (D, K and N) ALIDE_RS15750 PF01336 OB-fold nucleic acid binding domain ALIDE_RS15755 PF00924 Mechanosensitive ion channel ALIDE_RS15760 PF13458 Periplasmic binding protein ALIDE_RS15765 PF02653 ALIDE_RS15765 ALIDE_RS15770 PF02653 ALIDE_RS15770 ALIDE_RS15770 PF11862 ALIDE_RS15770 ALIDE_RS15775 PF00005 ABC transporter ALIDE_RS15775 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS15780 PF00005 ABC transporter ALIDE_RS15785 PF00365 Phosphofructokinase ALIDE_RS15790 PF00933 Glycosyl hydrolase family 3 N terminal domain ALIDE_RS15795 PF01648 4'-phosphopantetheinyl transferase superfamily ALIDE_RS15800 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ALIDE_RS15805 PF02565 Recombination protein O C terminal ALIDE_RS15805 PF11967 Recombination protein O N terminal ALIDE_RS15810 PF01926 50S ribosome-binding GTPase ALIDE_RS15810 PF07650 KH domain ALIDE_RS15815 PF00035 Double-stranded RNA binding motif ALIDE_RS15815 PF14622 Ribonuclease-III-like ALIDE_RS15820 PF16137 ALIDE_RS15820 ALIDE_RS15825 PF00717 Peptidase S24-like ALIDE_RS15825 PF10502 Signal peptidase, peptidase S26 ALIDE_RS15830 PF00009 Elongation factor Tu GTP binding domain ALIDE_RS15830 PF00679 Elongation factor G C-terminus ALIDE_RS15830 PF03144 Elongation factor Tu domain 2 ALIDE_RS15830 PF06421 GTP-binding protein LepA C-terminus ALIDE_RS15835 PF13180 PDZ domain ALIDE_RS15835 PF13365 Trypsin-like peptidase domain ALIDE_RS15840 PF03888 MucB/RseB family ALIDE_RS15840 PF17188 ALIDE_RS15840 ALIDE_RS15845 PF03872 Anti sigma-E protein RseA, N-terminal domain ALIDE_RS15850 PF04542 Sigma-70 region 2 ALIDE_RS15850 PF08281 Sigma-70, region 4 ALIDE_RS15860 PF00109 Beta-ketoacyl synthase, N-terminal domain ALIDE_RS15860 PF02801 Beta-ketoacyl synthase, C-terminal domain ALIDE_RS15865 PF00550 Phosphopantetheine attachment site ALIDE_RS15870 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS15875 PF00698 Acyl transferase domain ALIDE_RS15880 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALIDE_RS15880 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALIDE_RS15885 PF02504 Fatty acid synthesis protein ALIDE_RS15890 PF01783 Ribosomal L32p protein family ALIDE_RS15895 PF02620 ALIDE_RS15895 ALIDE_RS15900 PF02545 Maf-like protein ALIDE_RS15905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALIDE_RS15910 PF01343 Peptidase family S49 ALIDE_RS15915 PF00355 Rieske [2Fe-2S] domain ALIDE_RS15920 PF13419 Haloacid dehalogenase-like hydrolase ALIDE_RS15925 PF00849 RNA pseudouridylate synthase ALIDE_RS15925 PF01479 S4 domain ALIDE_RS15930 PF00575 S1 RNA binding domain ALIDE_RS15930 PF10150 Ribonuclease E/G family ALIDE_RS15935 PF03883 ALIDE_RS15935 ALIDE_RS15940 PF13640 2OG-Fe(II) oxygenase superfamily ALIDE_RS15945 PF14489 QueF-like protein ALIDE_RS15945 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ALIDE_RS15950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS15950 PF08447 PAS fold ALIDE_RS15955 PF00817 impB/mucB/samB family ALIDE_RS15955 PF11798 IMS family HHH motif ALIDE_RS15955 PF11799 impB/mucB/samB family C-terminal domain ALIDE_RS15960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS15960 PF03466 LysR substrate binding domain ALIDE_RS15965 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS15970 PF02515 CoA-transferase family III ALIDE_RS15975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS15975 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS15985 PF01070 FMN-dependent dehydrogenase ALIDE_RS15990 PF00691 OmpA family ALIDE_RS15995 PF00672 HAMP domain ALIDE_RS15995 PF00990 GGDEF domain ALIDE_RS15995 PF17152 ALIDE_RS15995 ALIDE_RS16000 PF13689 ALIDE_RS16000 ALIDE_RS16005 PF00905 Penicillin binding protein transpeptidase domain ALIDE_RS16005 PF00912 Transglycosylase ALIDE_RS16005 PF06832 ALIDE_RS16005 ALIDE_RS16015 PF02515 CoA-transferase family III ALIDE_RS16020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16020 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS16020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS16025 PF13380 CoA binding domain ALIDE_RS16025 PF13549 ATP-grasp domain ALIDE_RS16025 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE_RS16030 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16030 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS16030 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS16035 PF00710 Asparaginase ALIDE_RS16040 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS16045 PF03466 LysR substrate binding domain ALIDE_RS16050 PF00149 Calcineurin-like phosphoesterase ALIDE_RS16055 PF00207 Alpha-2-macroglobulin family ALIDE_RS16055 PF01835 MG2 domain ALIDE_RS16055 PF07703 Alpha-2-macroglobulin family N-terminal region ALIDE_RS16055 PF11974 Alpha-2-macroglobulin MG1 domain ALIDE_RS16060 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16065 PF00206 Lyase ALIDE_RS16065 PF14698 Argininosuccinate lyase C-terminal ALIDE_RS16070 PF06580 ALIDE_RS16070 ALIDE_RS16075 PF03180 NLPA lipoprotein ALIDE_RS16080 PF04293 ALIDE_RS16080 ALIDE_RS16085 PF04285 ALIDE_RS16085 ALIDE_RS16090 PF06798 ALIDE_RS16090 ALIDE_RS16090 PF08298 PrkA AAA domain ALIDE_RS16095 PF02082 Transcriptional regulator ALIDE_RS16100 PF01814 Hemerythrin HHE cation binding domain ALIDE_RS16100 PF04405 ALIDE_RS16100 ALIDE_RS16110 PF12843 ALIDE_RS16110 ALIDE_RS16115 PF05425 ALIDE_RS16115 ALIDE_RS16120 PF00248 Aldo/keto reductase family ALIDE_RS16125 PF04102 SlyX ALIDE_RS16130 PF00155 Aminotransferase class I and II ALIDE_RS16135 PF06445 GyrI-like small molecule binding domain ALIDE_RS16140 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16145 PF01425 Amidase ALIDE_RS16150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS16150 PF03466 LysR substrate binding domain ALIDE_RS16155 PF00633 Helix-hairpin-helix motif ALIDE_RS16155 PF00730 HhH-GPD superfamily base excision DNA repair protein ALIDE_RS16155 PF10576 Iron-sulfur binding domain of endonuclease III ALIDE_RS16160 PF01661 Macro domain ALIDE_RS16165 PF02277 Phosphoribosyltransferase ALIDE_RS16170 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE_RS16170 PF07685 CobB/CobQ-like glutamine amidotransferase domain ALIDE_RS16175 PF00155 Aminotransferase class I and II ALIDE_RS16180 PF03186 ALIDE_RS16180 ALIDE_RS16185 PF12019 Type II transport protein GspH ALIDE_RS16195 PF13544 ALIDE_RS16195 ALIDE_RS16195 PF16074 ALIDE_RS16195 ALIDE_RS16200 PF13681 ALIDE_RS16200 ALIDE_RS16200 PF14341 ALIDE_RS16200 ALIDE_RS16205 PF05567 Neisseria PilC beta-propeller domain ALIDE_RS16210 PF13544 ALIDE_RS16210 ALIDE_RS16210 PF16732 ALIDE_RS16210 ALIDE_RS16215 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALIDE_RS16215 PF01872 RibD C-terminal domain ALIDE_RS16220 PF13091 PLD-like domain ALIDE_RS16225 PF01207 Dihydrouridine synthase (Dus) ALIDE_RS16230 PF05175 Methyltransferase small domain ALIDE_RS16235 PF00583 Acetyltransferase (GNAT) family ALIDE_RS16240 PF00171 Aldehyde dehydrogenase family ALIDE_RS16250 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS16250 PF02861 Clp amino terminal domain ALIDE_RS16250 PF07724 AAA domain (Cdc48 subfamily) ALIDE_RS16250 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE_RS16255 PF02391 MoaE protein ALIDE_RS16270 PF00701 Dihydrodipicolinate synthetase family ALIDE_RS16275 PF02597 ThiS family ALIDE_RS16280 PF00994 Probable molybdopterin binding domain ALIDE_RS16280 PF03453 MoeA N-terminal region (domain I and II) ALIDE_RS16280 PF03454 MoeA C-terminal region (domain IV) ALIDE_RS16285 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ALIDE_RS16290 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS16290 PF14821 Threonine synthase N terminus ALIDE_RS16295 PF01850 PIN domain ALIDE_RS16300 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ALIDE_RS16305 PF00742 Homoserine dehydrogenase ALIDE_RS16305 PF01842 ACT domain ALIDE_RS16305 PF03447 Homoserine dehydrogenase, NAD binding domain ALIDE_RS16310 PF00155 Aminotransferase class I and II ALIDE_RS16315 PF04430 Protein of unknown function (DUF498/DUF598) ALIDE_RS16330 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16335 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS16335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS16340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS16345 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE_RS16345 PF01012 Electron transfer flavoprotein domain ALIDE_RS16350 PF01012 Electron transfer flavoprotein domain ALIDE_RS16355 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16360 PF00108 Thiolase, N-terminal domain ALIDE_RS16360 PF02803 Thiolase, C-terminal domain ALIDE_RS16365 PF01796 ALIDE_RS16365 ALIDE_RS16365 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) ALIDE_RS16375 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS16380 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16380 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS16380 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS16385 PF13380 CoA binding domain ALIDE_RS16385 PF13549 ATP-grasp domain ALIDE_RS16385 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE_RS16390 PF01796 ALIDE_RS16390 ALIDE_RS16395 PF02803 Thiolase, C-terminal domain ALIDE_RS16400 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS16405 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS16405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE_RS16410 PF13333 ALIDE_RS16410 ALIDE_RS16415 PF01614 Bacterial transcriptional regulator ALIDE_RS16415 PF09339 IclR helix-turn-helix domain ALIDE_RS16420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS16425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16425 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS16425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS16430 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS16435 PF13577 SnoaL-like domain ALIDE_RS16440 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16445 PF00106 short chain dehydrogenase ALIDE_RS16450 PF02515 CoA-transferase family III ALIDE_RS16455 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS16460 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS16465 PF02515 CoA-transferase family III ALIDE_RS16470 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ALIDE_RS16480 PF08241 Methyltransferase domain ALIDE_RS16485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALIDE_RS16485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALIDE_RS16490 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ALIDE_RS16495 PF00005 ABC transporter ALIDE_RS16500 PF01032 FecCD transport family ALIDE_RS16505 PF01497 Periplasmic binding protein ALIDE_RS16510 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ALIDE_RS16515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE_RS16515 PF07685 CobB/CobQ-like glutamine amidotransferase domain ALIDE_RS16520 PF00593 TonB dependent receptor ALIDE_RS16520 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS16530 PF05164 Cell division protein ZapA ALIDE_RS16535 PF00563 EAL domain ALIDE_RS16535 PF00990 GGDEF domain ALIDE_RS16535 PF13188 PAS domain ALIDE_RS16535 PF13426 PAS domain ALIDE_RS16540 PF11871 ALIDE_RS16540 ALIDE_RS16540 PF13487 HD domain ALIDE_RS16545 PF13386 ALIDE_RS16545 ALIDE_RS16550 PF04055 Radical SAM superfamily ALIDE_RS16550 PF06969 HemN C-terminal domain ALIDE_RS16555 PF00027 Cyclic nucleotide-binding domain ALIDE_RS16555 PF13545 Crp-like helix-turn-helix domain ALIDE_RS16565 PF05751 ALIDE_RS16565 ALIDE_RS16570 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ALIDE_RS16570 PF12801 ALIDE_RS16570 ALIDE_RS16570 PF13746 4Fe-4S dicluster domain ALIDE_RS16575 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS16575 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ALIDE_RS16580 PF05545 ALIDE_RS16580 ALIDE_RS16585 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO ALIDE_RS16590 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE_RS16595 PF03597 ALIDE_RS16595 ALIDE_RS16600 PF00122 E1-E2 ATPase ALIDE_RS16600 PF00403 Heavy-metal-associated domain ALIDE_RS16600 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS16605 PF00582 Universal stress protein family ALIDE_RS16610 PF00501 AMP-binding enzyme ALIDE_RS16610 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS16615 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS16620 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16625 PF05292 Malonyl-CoA decarboxylase (MCD) ALIDE_RS16630 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS16630 PF07729 FCD domain ALIDE_RS16630 PF15575 ALIDE_RS16630 ALIDE_RS16635 PF01790 ALIDE_RS16635 ALIDE_RS16640 PF00210 Ferritin-like domain ALIDE_RS16645 PF03061 Thioesterase superfamily ALIDE_RS16650 PF00920 Dehydratase family ALIDE_RS16655 PF00920 Dehydratase family ALIDE_RS16665 PF00034 Cytochrome c ALIDE_RS16670 PF00005 ABC transporter ALIDE_RS16675 PF02687 ALIDE_RS16675 ALIDE_RS16675 PF12704 MacB-like periplasmic core domain ALIDE_RS16685 PF01368 DHH family ALIDE_RS16685 PF02272 DHHA1 domain ALIDE_RS16690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS16690 PF00672 HAMP domain ALIDE_RS16695 PF02811 PHP domain ALIDE_RS16700 PF01300 Telomere recombination ALIDE_RS16705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS16705 PF00672 HAMP domain ALIDE_RS16715 PF00579 tRNA synthetases class I (W and Y) ALIDE_RS16715 PF07411 Domain of unknown function (DUF1508) ALIDE_RS16720 PF00072 Response regulator receiver domain ALIDE_RS16720 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS16725 PF01476 LysM domain ALIDE_RS16725 PF04773 FecR protein ALIDE_RS16730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS16730 PF05226 ALIDE_RS16730 ALIDE_RS16735 PF02397 ALIDE_RS16735 ALIDE_RS16750 PF01062 ALIDE_RS16750 ALIDE_RS16755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALIDE_RS16755 PF02403 Seryl-tRNA synthetase N-terminal domain ALIDE_RS16760 PF00571 CBS domain ALIDE_RS16765 PF00571 CBS domain ALIDE_RS16765 PF01595 ALIDE_RS16765 ALIDE_RS16765 PF03471 Transporter associated domain ALIDE_RS16770 PF02401 LytB protein ALIDE_RS16775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE_RS16780 PF04002 RadC-like JAB domain ALIDE_RS16785 PF13449 Esterase-like activity of phytase ALIDE_RS16790 PF01713 Smr domain ALIDE_RS16795 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16800 PF00330 Aconitase family (aconitate hydratase) ALIDE_RS16805 PF00694 Aconitase C-terminal domain ALIDE_RS16810 PF13714 Phosphoenolpyruvate phosphomutase ALIDE_RS16815 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS16815 PF07702 UTRA domain ALIDE_RS16820 PF01152 Bacterial-like globin ALIDE_RS16825 PF01258 Prokaryotic dksA/traR C4-type zinc finger ALIDE_RS16830 PF13671 AAA domain ALIDE_RS16840 PF02687 ALIDE_RS16840 ALIDE_RS16845 PF02634 FdhD/NarQ family ALIDE_RS16855 PF01292 Prokaryotic cytochrome b561 ALIDE_RS16865 PF13247 4Fe-4S dicluster domain ALIDE_RS16870 PF00384 Molybdopterin oxidoreductase ALIDE_RS16870 PF01568 Molydopterin dinucleotide binding domain ALIDE_RS16870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS16880 PF02613 Nitrate reductase delta subunit ALIDE_RS16885 PF00037 4Fe-4S binding domain ALIDE_RS16885 PF12838 4Fe-4S dicluster domain ALIDE_RS16885 PF13187 4Fe-4S dicluster domain ALIDE_RS16890 PF11748 ALIDE_RS16890 ALIDE_RS16895 PF11749 ALIDE_RS16895 ALIDE_RS16900 PF00384 Molybdopterin oxidoreductase ALIDE_RS16900 PF01568 Molydopterin dinucleotide binding domain ALIDE_RS16900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS16900 PF13187 4Fe-4S dicluster domain ALIDE_RS16900 PF13510 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS16905 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin ALIDE_RS16905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ALIDE_RS16905 PF10531 SLBB domain ALIDE_RS16905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ALIDE_RS16910 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS16915 PF07690 Major Facilitator Superfamily ALIDE_RS16920 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS16920 PF07702 UTRA domain ALIDE_RS16925 PF02515 CoA-transferase family III ALIDE_RS16930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS16930 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS16930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS16935 PF03972 MmgE/PrpD family ALIDE_RS16940 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS16945 PF01575 MaoC like domain ALIDE_RS16950 PF01883 Domain of unknown function DUF59 ALIDE_RS16950 PF10609 ParA/MinD ATPase like ALIDE_RS16955 PF03595 Voltage-dependent anion channel ALIDE_RS16960 PF00586 AIR synthase related protein, N-terminal domain ALIDE_RS16960 PF02769 AIR synthase related protein, C-terminal domain ALIDE_RS16965 PF00581 Rhodanese-like domain ALIDE_RS16970 PF04471 Restriction endonuclease ALIDE_RS16975 PF01734 Patatin-like phospholipase ALIDE_RS16980 PF01588 Putative tRNA binding domain ALIDE_RS16980 PF09334 tRNA synthetases class I (M) ALIDE_RS16990 PF00155 Aminotransferase class I and II ALIDE_RS16990 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS16995 PF03594 ALIDE_RS16995 ALIDE_RS17000 PF01168 Alanine racemase, N-terminal domain ALIDE_RS17005 PF00117 Glutamine amidotransferase class-I ALIDE_RS17010 PF12625 ALIDE_RS17010 ALIDE_RS17010 PF12833 Helix-turn-helix domain ALIDE_RS17015 PF00890 FAD binding domain ALIDE_RS17020 PF01070 FMN-dependent dehydrogenase ALIDE_RS17025 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE_RS17025 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALIDE_RS17035 PF11943 ALIDE_RS17035 ALIDE_RS17040 PF02616 ScpA/B protein ALIDE_RS17045 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS17050 PF12833 Helix-turn-helix domain ALIDE_RS17050 PF12852 Cupin ALIDE_RS17055 PF00890 FAD binding domain ALIDE_RS17055 PF02910 Fumarate reductase flavoprotein C-term ALIDE_RS17060 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase ALIDE_RS17065 PF00425 chorismate binding enzyme ALIDE_RS17065 PF01063 Aminotransferase class IV ALIDE_RS17070 PF02445 Quinolinate synthetase A protein ALIDE_RS17075 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ALIDE_RS17075 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ALIDE_RS17080 PF02548 Ketopantoate hydroxymethyltransferase ALIDE_RS17085 PF02569 Pantoate-beta-alanine ligase ALIDE_RS17090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS17090 PF03466 LysR substrate binding domain ALIDE_RS17095 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17100 PF07171 MlrC C-terminus ALIDE_RS17100 PF07364 Protein of unknown function (DUF1485) ALIDE_RS17105 PF01925 ALIDE_RS17105 ALIDE_RS17110 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17120 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ALIDE_RS17120 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ALIDE_RS17125 PF02556 Preprotein translocase subunit SecB ALIDE_RS17130 PF00462 Glutaredoxin ALIDE_RS17135 PF00581 Rhodanese-like domain ALIDE_RS17140 PF00300 Histidine phosphatase superfamily (branch 1) ALIDE_RS17145 PF03572 Peptidase family S41 ALIDE_RS17145 PF13180 PDZ domain ALIDE_RS17150 PF00899 ThiF family ALIDE_RS17155 PF00072 Response regulator receiver domain ALIDE_RS17160 PF00072 Response regulator receiver domain ALIDE_RS17160 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS17165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS17165 PF05227 CHASE3 domain ALIDE_RS17165 PF07730 Histidine kinase ALIDE_RS17180 PF04972 BON domain ALIDE_RS17185 PF01467 Cytidylyltransferase ALIDE_RS17190 PF03602 Conserved hypothetical protein 95 ALIDE_RS17195 PF05193 Peptidase M16 inactive domain ALIDE_RS17200 PF00675 Insulinase (Peptidase family M16) ALIDE_RS17200 PF05193 Peptidase M16 inactive domain ALIDE_RS17205 PF00448 SRP54-type protein, GTPase domain ALIDE_RS17205 PF02881 SRP54-type protein, helical bundle domain ALIDE_RS17210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS17210 PF03466 LysR substrate binding domain ALIDE_RS17215 PF00701 Dihydrodipicolinate synthetase family ALIDE_RS17220 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17225 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS17230 PF13378 Enolase C-terminal domain-like ALIDE_RS17235 PF03091 CutA1 divalent ion tolerance protein ALIDE_RS17240 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17245 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17250 PF00330 Aconitase family (aconitate hydratase) ALIDE_RS17250 PF00694 Aconitase C-terminal domain ALIDE_RS17255 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS17255 PF07729 FCD domain ALIDE_RS17260 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS17265 PF10282 Lactonase, 7-bladed beta-propeller ALIDE_RS17270 PF00107 Zinc-binding dehydrogenase ALIDE_RS17270 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS17285 PF00072 Response regulator receiver domain ALIDE_RS17285 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS17290 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS17290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS17295 PF01988 ALIDE_RS17295 ALIDE_RS17300 PF01292 Prokaryotic cytochrome b561 ALIDE_RS17305 PF16576 ALIDE_RS17305 ALIDE_RS17310 PF00873 AcrB/AcrD/AcrF family ALIDE_RS17315 PF11582 Protein of unknown function (DUF3240) ALIDE_RS17320 PF02321 Outer membrane efflux protein ALIDE_RS17330 PF00140 Sigma-70 factor, region 1 ALIDE_RS17330 PF04542 Sigma-70 region 2 ALIDE_RS17330 PF04545 Sigma-70, region 4 ALIDE_RS17335 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17340 PF02630 SCO1/SenC ALIDE_RS17345 PF01040 UbiA prenyltransferase family ALIDE_RS17350 PF02628 ALIDE_RS17350 ALIDE_RS17360 PF02104 ALIDE_RS17360 ALIDE_RS17365 PF11137 ALIDE_RS17365 ALIDE_RS17370 PF00510 Cytochrome c oxidase subunit III ALIDE_RS17375 PF11174 ALIDE_RS17375 ALIDE_RS17380 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ALIDE_RS17385 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE_RS17390 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALIDE_RS17390 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ALIDE_RS17390 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS17400 PF00156 Phosphoribosyl transferase domain ALIDE_RS17405 PF00588 SpoU rRNA Methylase family ALIDE_RS17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS17410 PF03466 LysR substrate binding domain ALIDE_RS17415 PF13663 ALIDE_RS17415 ALIDE_RS17420 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE_RS17425 PF01810 ALIDE_RS17425 ALIDE_RS17430 PF00999 Sodium/hydrogen exchanger family ALIDE_RS17430 PF02254 TrkA-N domain ALIDE_RS17435 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS17435 PF07702 UTRA domain ALIDE_RS17440 PF13714 Phosphoenolpyruvate phosphomutase ALIDE_RS17445 PF00330 Aconitase family (aconitate hydratase) ALIDE_RS17450 PF00694 Aconitase C-terminal domain ALIDE_RS17455 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17460 PF04303 PrpF protein ALIDE_RS17465 PF03972 MmgE/PrpD family ALIDE_RS17470 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17475 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17480 PF01546 Peptidase family M20/M25/M40 ALIDE_RS17480 PF07687 Peptidase dimerisation domain ALIDE_RS17485 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17490 PF03466 LysR substrate binding domain ALIDE_RS17495 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17500 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS17505 PF00108 Thiolase, N-terminal domain ALIDE_RS17505 PF02803 Thiolase, C-terminal domain ALIDE_RS17510 PF01144 Coenzyme A transferase ALIDE_RS17515 PF01144 Coenzyme A transferase ALIDE_RS17520 PF01614 Bacterial transcriptional regulator ALIDE_RS17520 PF09339 IclR helix-turn-helix domain ALIDE_RS17525 PF08897 ALIDE_RS17525 ALIDE_RS17530 PF00582 Universal stress protein family ALIDE_RS17535 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS17540 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS17545 PF13302 Acetyltransferase (GNAT) domain ALIDE_RS17550 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS17555 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS17555 PF07702 UTRA domain ALIDE_RS17560 PF02515 CoA-transferase family III ALIDE_RS17565 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS17565 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS17565 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS17570 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS17575 PF03972 MmgE/PrpD family ALIDE_RS17580 PF05762 VWA domain containing CoxE-like protein ALIDE_RS17585 PF01103 Surface antigen ALIDE_RS17590 PF04357 ALIDE_RS17590 ALIDE_RS17605 PF13560 Helix-turn-helix domain ALIDE_RS17655 PF10145 ALIDE_RS17655 ALIDE_RS17675 PF03864 Phage major capsid protein E ALIDE_RS17680 PF02924 Bacteriophage lambda head decoration protein D ALIDE_RS17685 PF01343 Peptidase family S49 ALIDE_RS17690 PF05136 ALIDE_RS17690 ALIDE_RS17700 PF08765 Mor transcription activator family ALIDE_RS17705 PF05876 ALIDE_RS17705 ALIDE_RS17750 PF01022 Bacterial regulatory protein, arsR family ALIDE_RS17860 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) ALIDE_RS17865 PF07505 ALIDE_RS17865 ALIDE_RS17875 PF00145 C-5 cytosine-specific DNA methylase ALIDE_RS17885 PF00589 Phage integrase family ALIDE_RS17910 PF02628 ALIDE_RS17910 ALIDE_RS17920 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE_RS17925 PF01040 UbiA prenyltransferase family ALIDE_RS17930 PF02630 SCO1/SenC ALIDE_RS17935 PF00033 Cytochrome b(N-terminal)/b6/petB ALIDE_RS17935 PF02662 ALIDE_RS17935 ALIDE_RS17935 PF12838 4Fe-4S dicluster domain ALIDE_RS17945 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE_RS17950 PF00033 Cytochrome b(N-terminal)/b6/petB ALIDE_RS17950 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE_RS17950 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS17950 PF00970 Oxidoreductase FAD-binding domain ALIDE_RS17955 PF13091 PLD-like domain ALIDE_RS17960 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS17965 PF00072 Response regulator receiver domain ALIDE_RS17965 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS17970 PF13180 PDZ domain ALIDE_RS17970 PF13365 Trypsin-like peptidase domain ALIDE_RS17975 PF03960 ArsC family ALIDE_RS17980 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS17985 PF00005 ABC transporter ALIDE_RS17985 PF08402 TOBE domain ALIDE_RS17990 PF01553 Acyltransferase ALIDE_RS17995 PF07969 Amidohydrolase family ALIDE_RS18000 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALIDE_RS18000 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALIDE_RS18005 PF00156 Phosphoribosyl transferase domain ALIDE_RS18010 PF03652 Uncharacterised protein family (UPF0081) ALIDE_RS18015 PF02622 Uncharacterized ACR, COG1678 ALIDE_RS18020 PF00072 Response regulator receiver domain ALIDE_RS18020 PF01584 CheW-like domain ALIDE_RS18020 PF01627 Hpt domain ALIDE_RS18020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS18020 PF02895 Signal transducing histidine kinase, homodimeric domain ALIDE_RS18025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS18025 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ALIDE_RS18030 PF01584 CheW-like domain ALIDE_RS18035 PF00072 Response regulator receiver domain ALIDE_RS18040 PF00072 Response regulator receiver domain ALIDE_RS18045 PF08543 Phosphomethylpyrimidine kinase ALIDE_RS18050 PF00202 Aminotransferase class-III ALIDE_RS18055 PF01808 AICARFT/IMPCHase bienzyme ALIDE_RS18055 PF02142 MGS-like domain ALIDE_RS18060 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS18065 PF01207 Dihydrouridine synthase (Dus) ALIDE_RS18075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS18075 PF03466 LysR substrate binding domain ALIDE_RS18080 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS18085 PF07687 Peptidase dimerisation domain ALIDE_RS18090 PF01970 ALIDE_RS18090 ALIDE_RS18095 PF07331 ALIDE_RS18095 ALIDE_RS18100 PF00672 HAMP domain ALIDE_RS18100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS18105 PF00072 Response regulator receiver domain ALIDE_RS18105 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS18110 PF01926 50S ribosome-binding GTPase ALIDE_RS18110 PF06071 Protein of unknown function (DUF933) ALIDE_RS18115 PF01494 FAD binding domain ALIDE_RS18120 PF10411 Disulfide bond isomerase protein N-terminus ALIDE_RS18120 PF13098 Thioredoxin-like domain ALIDE_RS18125 PF05299 M61 glycyl aminopeptidase ALIDE_RS18130 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS18145 PF00919 Uncharacterized protein family UPF0004 ALIDE_RS18145 PF01938 TRAM domain ALIDE_RS18145 PF04055 Radical SAM superfamily ALIDE_RS18150 PF00448 SRP54-type protein, GTPase domain ALIDE_RS18150 PF02881 SRP54-type protein, helical bundle domain ALIDE_RS18150 PF02978 Signal peptide binding domain ALIDE_RS18155 PF01578 ALIDE_RS18155 ALIDE_RS18165 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS18165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS18165 PF13188 PAS domain ALIDE_RS18170 PF00072 Response regulator receiver domain ALIDE_RS18170 PF00158 Sigma-54 interaction domain ALIDE_RS18170 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS18175 PF01510 N-acetylmuramoyl-L-alanine amidase ALIDE_RS18180 PF00317 Ribonucleotide reductase, all-alpha domain ALIDE_RS18180 PF02867 Ribonucleotide reductase, barrel domain ALIDE_RS18180 PF03477 ATP cone domain ALIDE_RS18185 PF00268 Ribonucleotide reductase, small chain ALIDE_RS18195 PF00294 pfkB family carbohydrate kinase ALIDE_RS18200 PF11906 ALIDE_RS18200 ALIDE_RS18200 PF13719 ALIDE_RS18200 ALIDE_RS18205 PF06325 Ribosomal protein L11 methyltransferase (PrmA) ALIDE_RS18210 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS18210 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS18210 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS18215 PF00364 Biotin-requiring enzyme ALIDE_RS18220 PF08534 Redoxin ALIDE_RS18230 PF01225 Mur ligase family, catalytic domain ALIDE_RS18230 PF02875 Mur ligase family, glutamate ligase domain ALIDE_RS18230 PF08245 Mur ligase middle domain ALIDE_RS18240 PF00793 DAHP synthetase I family ALIDE_RS18245 PF01523 Putative modulator of DNA gyrase ALIDE_RS18250 PF01098 ALIDE_RS18250 ALIDE_RS18255 PF05728 Uncharacterised protein family (UPF0227) ALIDE_RS18260 PF04932 ALIDE_RS18260 ALIDE_RS18260 PF11846 ALIDE_RS18260 ALIDE_RS18260 PF15864 ALIDE_RS18260 ALIDE_RS18265 PF00034 Cytochrome c ALIDE_RS18270 PF13668 Ferritin-like domain ALIDE_RS18275 PF04542 Sigma-70 region 2 ALIDE_RS18275 PF08281 Sigma-70, region 4 ALIDE_RS18280 PF00773 RNB domain ALIDE_RS18285 PF13103 TonB C terminal ALIDE_RS18290 PF01488 Shikimate / quinate 5-dehydrogenase ALIDE_RS18290 PF08501 Shikimate dehydrogenase substrate binding domain ALIDE_RS18295 PF00912 Transglycosylase ALIDE_RS18305 PF13683 ALIDE_RS18305 ALIDE_RS18310 PF01527 Transposase ALIDE_RS18315 PF02075 Crossover junction endodeoxyribonuclease RuvC ALIDE_RS18320 PF01638 HxlR-like helix-turn-helix ALIDE_RS18325 PF08241 Methyltransferase domain ALIDE_RS18330 PF01964 ThiC family ALIDE_RS18330 PF13667 ThiC-associated domain ALIDE_RS18335 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ALIDE_RS18340 PF09339 IclR helix-turn-helix domain ALIDE_RS18345 PF04199 Putative cyclase ALIDE_RS18350 PF00501 AMP-binding enzyme ALIDE_RS18350 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS18355 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS18360 PF13458 Periplasmic binding protein ALIDE_RS18365 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS18370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS18370 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS18370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS18375 PF00091 Tubulin/FtsZ family, GTPase domain ALIDE_RS18375 PF12327 FtsZ family, C-terminal domain ALIDE_RS18380 PF02491 SHS2 domain inserted in FTSA ALIDE_RS18380 PF14450 Cell division protein FtsA ALIDE_RS18385 PF03799 Cell division protein FtsQ ALIDE_RS18385 PF08478 POTRA domain, FtsQ-type ALIDE_RS18390 PF01820 D-ala D-ala ligase N-terminus ALIDE_RS18390 PF07478 D-ala D-ala ligase C-terminus ALIDE_RS18395 PF01225 Mur ligase family, catalytic domain ALIDE_RS18395 PF02875 Mur ligase family, glutamate ligase domain ALIDE_RS18395 PF08245 Mur ligase middle domain ALIDE_RS18400 PF03033 Glycosyltransferase family 28 N-terminal domain ALIDE_RS18400 PF04101 Glycosyltransferase family 28 C-terminal domain ALIDE_RS18405 PF01098 ALIDE_RS18405 ALIDE_RS18410 PF02875 Mur ligase family, glutamate ligase domain ALIDE_RS18410 PF08245 Mur ligase middle domain ALIDE_RS18415 PF00953 Glycosyl transferase family 4 ALIDE_RS18415 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ALIDE_RS18420 PF01225 Mur ligase family, catalytic domain ALIDE_RS18420 PF02875 Mur ligase family, glutamate ligase domain ALIDE_RS18420 PF08245 Mur ligase middle domain ALIDE_RS18425 PF01225 Mur ligase family, catalytic domain ALIDE_RS18425 PF02875 Mur ligase family, glutamate ligase domain ALIDE_RS18425 PF08245 Mur ligase middle domain ALIDE_RS18430 PF00905 Penicillin binding protein transpeptidase domain ALIDE_RS18430 PF03717 Penicillin-binding Protein dimerisation domain ALIDE_RS18435 PF04999 ALIDE_RS18435 ALIDE_RS18440 PF01795 MraW methylase family ALIDE_RS18445 PF02381 MraZ protein ALIDE_RS18450 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS18450 PF07724 AAA domain (Cdc48 subfamily) ALIDE_RS18450 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE_RS18455 PF00227 Proteasome subunit ALIDE_RS18460 PF13466 STAS domain ALIDE_RS18465 PF01258 Prokaryotic dksA/traR C4-type zinc finger ALIDE_RS18470 PF02492 CobW/HypB/UreG, nucleotide-binding domain ALIDE_RS18470 PF07683 Cobalamin synthesis protein cobW C-terminal domain ALIDE_RS18475 PF11534 Hexameric tyrosine-coordinated heme protein (HTHP) ALIDE_RS18485 PF00072 Response regulator receiver domain ALIDE_RS18485 PF12728 Helix-turn-helix domain ALIDE_RS18490 PF00072 Response regulator receiver domain ALIDE_RS18500 PF00072 Response regulator receiver domain ALIDE_RS18500 PF12728 Helix-turn-helix domain ALIDE_RS18505 PF00072 Response regulator receiver domain ALIDE_RS18510 PF13487 HD domain ALIDE_RS18515 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS18515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS18515 PF08448 PAS fold ALIDE_RS18520 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS18520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS18525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS18525 PF00672 HAMP domain ALIDE_RS18525 PF12729 ALIDE_RS18525 ALIDE_RS18530 PF00589 Phage integrase family ALIDE_RS18530 PF02899 Phage integrase, N-terminal SAM-like domain ALIDE_RS18535 PF04340 Protein of unknown function, DUF484 ALIDE_RS18540 PF01678 Diaminopimelate epimerase ALIDE_RS18545 PF00753 Metallo-beta-lactamase superfamily ALIDE_RS18550 PF01479 S4 domain ALIDE_RS18560 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS18575 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS18580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS18580 PF03466 LysR substrate binding domain ALIDE_RS18585 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE_RS18590 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS18595 PF02515 CoA-transferase family III ALIDE_RS18600 PF04909 Amidohydrolase ALIDE_RS18605 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS18610 PF12802 MarR family ALIDE_RS18615 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS18620 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS18625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS18625 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS18625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS18630 PF00501 AMP-binding enzyme ALIDE_RS18630 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS18635 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE_RS18635 PF01012 Electron transfer flavoprotein domain ALIDE_RS18640 PF01012 Electron transfer flavoprotein domain ALIDE_RS18645 PF03060 Nitronate monooxygenase ALIDE_RS18650 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS18655 PF02515 CoA-transferase family III ALIDE_RS18660 PF03061 Thioesterase superfamily ALIDE_RS18665 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS18670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS18670 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS18670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS18675 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS18675 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS18675 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS18680 PF00108 Thiolase, N-terminal domain ALIDE_RS18680 PF02803 Thiolase, C-terminal domain ALIDE_RS18685 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS18685 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE_RS18685 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE_RS18690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS18690 PF03466 LysR substrate binding domain ALIDE_RS18695 PF06627 Protein of unknown function (DUF1153) ALIDE_RS18710 PF01527 Transposase ALIDE_RS18715 PF00665 Integrase core domain ALIDE_RS18715 PF13276 ALIDE_RS18715 ALIDE_RS18720 PF13683 ALIDE_RS18720 ALIDE_RS18725 PF01527 Transposase ALIDE_RS18730 PF03050 ALIDE_RS18730 ALIDE_RS18730 PF13005 ALIDE_RS18730 ALIDE_RS18730 PF13007 ALIDE_RS18730 ALIDE_RS18730 PF13817 ALIDE_RS18730 ALIDE_RS18735 PF05717 ALIDE_RS18735 ALIDE_RS18740 PF01527 Transposase ALIDE_RS18750 PF01435 Peptidase family M48 ALIDE_RS18755 PF11227 ALIDE_RS18755 ALIDE_RS18760 PF01979 Amidohydrolase family ALIDE_RS18770 PF04343 ALIDE_RS18770 ALIDE_RS18775 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS18785 PF13458 Periplasmic binding protein ALIDE_RS18790 PF13609 Gram-negative porin ALIDE_RS18795 PF00083 Sugar (and other) transporter ALIDE_RS18800 PF04341 ALIDE_RS18800 ALIDE_RS18805 PF00474 Sodium:solute symporter family ALIDE_RS18810 PF00929 Exonuclease ALIDE_RS18815 PF00571 CBS domain ALIDE_RS18815 PF03445 ALIDE_RS18815 ALIDE_RS18815 PF10335 ALIDE_RS18815 ALIDE_RS18820 PF01323 DSBA-like thioredoxin domain ALIDE_RS18825 PF06945 ALIDE_RS18825 ALIDE_RS18830 PF04073 Aminoacyl-tRNA editing domain ALIDE_RS18835 PF00682 HMGL-like ALIDE_RS18840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE_RS18845 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS18845 PF00364 Biotin-requiring enzyme ALIDE_RS18845 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS18845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS18850 PF13548 ALIDE_RS18850 ALIDE_RS18855 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS18860 PF01039 Carboxyl transferase domain ALIDE_RS18865 PF00501 AMP-binding enzyme ALIDE_RS18865 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS18870 PF12625 ALIDE_RS18870 ALIDE_RS18870 PF12833 Helix-turn-helix domain ALIDE_RS18875 PF13417 Glutathione S-transferase, N-terminal domain ALIDE_RS18875 PF14497 Glutathione S-transferase, C-terminal domain ALIDE_RS18880 PF00732 GMC oxidoreductase ALIDE_RS18880 PF05199 GMC oxidoreductase ALIDE_RS18885 PF13458 Periplasmic binding protein ALIDE_RS18890 PF02653 ALIDE_RS18890 ALIDE_RS18895 PF00005 ABC transporter ALIDE_RS18895 PF02653 ALIDE_RS18895 ALIDE_RS18895 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS18900 PF00005 ABC transporter ALIDE_RS18905 PF00732 GMC oxidoreductase ALIDE_RS18905 PF05199 GMC oxidoreductase ALIDE_RS18910 PF00501 AMP-binding enzyme ALIDE_RS18910 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS18915 PF00155 Aminotransferase class I and II ALIDE_RS18915 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS18920 PF00368 Hydroxymethylglutaryl-coenzyme A reductase ALIDE_RS18925 PF13419 Haloacid dehalogenase-like hydrolase ALIDE_RS18930 PF00990 GGDEF domain ALIDE_RS18930 PF08447 PAS fold ALIDE_RS18935 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE_RS18945 PF00563 EAL domain ALIDE_RS18945 PF00990 GGDEF domain ALIDE_RS18945 PF07695 ALIDE_RS18945 ALIDE_RS18955 PF13852 ALIDE_RS18955 ALIDE_RS18960 PF04239 Protein of unknown function (DUF421) ALIDE_RS18965 PF09339 IclR helix-turn-helix domain ALIDE_RS18970 PF03575 Peptidase family S51 ALIDE_RS18975 PF06675 ALIDE_RS18975 ALIDE_RS18980 PF07302 ALIDE_RS18980 ALIDE_RS18985 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS19000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS19000 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS19000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS19005 PF00106 short chain dehydrogenase ALIDE_RS19010 PF00108 Thiolase, N-terminal domain ALIDE_RS19010 PF02803 Thiolase, C-terminal domain ALIDE_RS19015 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ALIDE_RS19020 PF00484 Carbonic anhydrase ALIDE_RS19025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS19025 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS19025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS19030 PF13411 MerR HTH family regulatory protein ALIDE_RS19060 PF00005 ABC transporter ALIDE_RS19060 PF12848 ABC transporter ALIDE_RS19060 PF16326 ALIDE_RS19060 ALIDE_RS19065 PF00072 Response regulator receiver domain ALIDE_RS19065 PF01339 CheB methylesterase ALIDE_RS19070 PF03975 CheD chemotactic sensory transduction ALIDE_RS19075 PF01739 CheR methyltransferase, SAM binding domain ALIDE_RS19075 PF03705 CheR methyltransferase, all-alpha domain ALIDE_RS19080 PF01584 CheW-like domain ALIDE_RS19085 PF01584 CheW-like domain ALIDE_RS19085 PF01627 Hpt domain ALIDE_RS19085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS19085 PF02895 Signal transducing histidine kinase, homodimeric domain ALIDE_RS19090 PF00072 Response regulator receiver domain ALIDE_RS19100 PF00072 Response regulator receiver domain ALIDE_RS19100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS19100 PF07730 Histidine kinase ALIDE_RS19105 PF00072 Response regulator receiver domain ALIDE_RS19105 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS19110 PF01311 ALIDE_RS19110 ALIDE_RS19115 PF01313 ALIDE_RS19115 ALIDE_RS19120 PF00813 ALIDE_RS19120 ALIDE_RS19125 PF04347 ALIDE_RS19125 ALIDE_RS19130 PF01052 Surface presentation of antigens (SPOA) ALIDE_RS19135 PF01052 Surface presentation of antigens (SPOA) ALIDE_RS19135 PF02154 Flagellar motor switch protein FliM ALIDE_RS19140 PF03748 ALIDE_RS19140 ALIDE_RS19145 PF02120 Flagellar hook-length control protein FliK ALIDE_RS19150 PF02050 Flagellar FliJ protein ALIDE_RS19155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALIDE_RS19155 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALIDE_RS19160 PF02108 ALIDE_RS19160 ALIDE_RS19165 PF01706 FliG C-terminal domain ALIDE_RS19165 PF14841 FliG middle domain ALIDE_RS19165 PF14842 FliG N-terminal domain ALIDE_RS19170 PF01514 Secretory protein of YscJ/FliF family ALIDE_RS19170 PF08345 ALIDE_RS19170 ALIDE_RS19175 PF02049 ALIDE_RS19175 ALIDE_RS19180 PF05400 Flagellar protein FliT ALIDE_RS19185 PF02561 Flagellar protein FliS ALIDE_RS19190 PF02465 ALIDE_RS19190 ALIDE_RS19190 PF07195 ALIDE_RS19190 ALIDE_RS19190 PF07196 Flagellin hook IN motif ALIDE_RS19195 PF00669 Bacterial flagellin N-terminal helical region ALIDE_RS19195 PF00700 Bacterial flagellin C-terminal helical region ALIDE_RS19195 PF07196 Flagellin hook IN motif ALIDE_RS19200 PF00669 Bacterial flagellin N-terminal helical region ALIDE_RS19200 PF00700 Bacterial flagellin C-terminal helical region ALIDE_RS19200 PF07196 Flagellin hook IN motif ALIDE_RS19205 PF00535 Glycosyl transferase family 2 ALIDE_RS19205 PF05159 ALIDE_RS19205 ALIDE_RS19205 PF14307 ALIDE_RS19205 ALIDE_RS19210 PF01618 ALIDE_RS19210 ALIDE_RS19215 PF00691 OmpA family ALIDE_RS19215 PF13677 ALIDE_RS19215 ALIDE_RS19220 PF00072 Response regulator receiver domain ALIDE_RS19225 PF04344 Chemotaxis phosphatase, CheZ ALIDE_RS19230 PF01312 FlhB HrpN YscU SpaS Family ALIDE_RS19235 PF00771 FHIPEP family ALIDE_RS19240 PF00448 SRP54-type protein, GTPase domain ALIDE_RS19250 PF04539 Sigma-70 region 3 ALIDE_RS19250 PF04542 Sigma-70 region 2 ALIDE_RS19250 PF04545 Sigma-70, region 4 ALIDE_RS19260 PF04316 Anti-sigma-28 factor, FlgM ALIDE_RS19265 PF13144 SAF-like ALIDE_RS19270 PF00460 Flagella basal body rod protein ALIDE_RS19275 PF00460 Flagella basal body rod protein ALIDE_RS19275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE_RS19280 PF03963 ALIDE_RS19280 ALIDE_RS19280 PF13860 FlgD Ig-like domain ALIDE_RS19280 PF13861 FlgD Tudor-like domain ALIDE_RS19285 PF00460 Flagella basal body rod protein ALIDE_RS19285 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE_RS19285 PF07559 Flagellar basal body protein FlaE ALIDE_RS19290 PF00460 Flagella basal body rod protein ALIDE_RS19290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE_RS19295 PF00460 Flagella basal body rod protein ALIDE_RS19295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE_RS19300 PF02107 ALIDE_RS19300 ALIDE_RS19305 PF02119 ALIDE_RS19305 ALIDE_RS19310 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ALIDE_RS19310 PF10135 ALIDE_RS19310 ALIDE_RS19315 PF00460 Flagella basal body rod protein ALIDE_RS19315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE_RS19320 PF00669 Bacterial flagellin N-terminal helical region ALIDE_RS19325 PF08668 HDOD domain ALIDE_RS19330 PF03060 Nitronate monooxygenase ALIDE_RS19335 PF00155 Aminotransferase class I and II ALIDE_RS19335 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS19340 PF01810 ALIDE_RS19340 ALIDE_RS19345 PF00892 EamA-like transporter family ALIDE_RS19350 PF00155 Aminotransferase class I and II ALIDE_RS19355 PF02567 Phenazine biosynthesis-like protein ALIDE_RS19360 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE_RS19365 PF04199 Putative cyclase ALIDE_RS19370 PF13458 Periplasmic binding protein ALIDE_RS19375 PF01370 NAD dependent epimerase/dehydratase family ALIDE_RS19380 PF00300 Histidine phosphatase superfamily (branch 1) ALIDE_RS19385 PF00990 GGDEF domain ALIDE_RS19390 PF07987 Domain of unkown function (DUF1775) ALIDE_RS19395 PF00593 TonB dependent receptor ALIDE_RS19395 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS19405 PF02633 Creatinine amidohydrolase ALIDE_RS19410 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS19415 PF02683 ALIDE_RS19415 ALIDE_RS19415 PF11412 Disulphide bond corrector protein DsbC ALIDE_RS19415 PF13899 Thioredoxin-like ALIDE_RS19425 PF01925 ALIDE_RS19425 ALIDE_RS19430 PF01471 Putative peptidoglycan binding domain ALIDE_RS19430 PF03734 L,D-transpeptidase catalytic domain ALIDE_RS19435 PF01208 Uroporphyrinogen decarboxylase (URO-D) ALIDE_RS19440 PF00270 DEAD/DEAH box helicase ALIDE_RS19440 PF00271 Helicase conserved C-terminal domain ALIDE_RS19445 PF00108 Thiolase, N-terminal domain ALIDE_RS19445 PF02803 Thiolase, C-terminal domain ALIDE_RS19450 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS19455 PF00501 AMP-binding enzyme ALIDE_RS19460 PF01609 Transposase DDE domain ALIDE_RS19460 PF05598 ALIDE_RS19460 ALIDE_RS19465 PF00501 AMP-binding enzyme ALIDE_RS19470 PF00005 ABC transporter ALIDE_RS19475 PF13458 Periplasmic binding protein ALIDE_RS19480 PF02653 ALIDE_RS19480 ALIDE_RS19485 PF02653 ALIDE_RS19485 ALIDE_RS19490 PF00005 ABC transporter ALIDE_RS19490 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS19495 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS19500 PF03547 ALIDE_RS19500 ALIDE_RS19505 PF00580 UvrD/REP helicase N-terminal domain ALIDE_RS19505 PF13361 UvrD-like helicase C-terminal domain ALIDE_RS19515 PF02253 Phospholipase A1 ALIDE_RS19520 PF03781 Sulfatase-modifying factor enzyme 1 ALIDE_RS19525 PF00884 Sulfatase ALIDE_RS19530 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS19535 PF01494 FAD binding domain ALIDE_RS19540 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE_RS19545 PF13609 Gram-negative porin ALIDE_RS19550 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS19550 PF07729 FCD domain ALIDE_RS19560 PF00582 Universal stress protein family ALIDE_RS19565 PF01702 Queuine tRNA-ribosyltransferase ALIDE_RS19575 PF00989 PAS fold ALIDE_RS19580 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE_RS19585 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS19590 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS19595 PF03737 Demethylmenaquinone methyltransferase ALIDE_RS19600 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS19600 PF07729 FCD domain ALIDE_RS19605 PF01553 Acyltransferase ALIDE_RS19605 PF07690 Major Facilitator Superfamily ALIDE_RS19610 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE_RS19610 PF01434 Peptidase family M41 ALIDE_RS19610 PF06480 FtsH Extracellular ALIDE_RS19615 PF00156 Phosphoribosyl transferase domain ALIDE_RS19620 PF00156 Phosphoribosyl transferase domain ALIDE_RS19630 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS19635 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS19640 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ALIDE_RS19645 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS19650 PF08495 ALIDE_RS19650 ALIDE_RS19650 PF10442 ALIDE_RS19650 ALIDE_RS19660 PF00216 Bacterial DNA-binding protein ALIDE_RS19665 PF13350 Tyrosine phosphatase family ALIDE_RS19675 PF01196 Ribosomal protein L17 ALIDE_RS19680 PF01000 RNA polymerase Rpb3/RpoA insert domain ALIDE_RS19680 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ALIDE_RS19680 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ALIDE_RS19685 PF00163 Ribosomal protein S4/S9 N-terminal domain ALIDE_RS19685 PF01479 S4 domain ALIDE_RS19690 PF00411 Ribosomal protein S11 ALIDE_RS19695 PF00416 Ribosomal protein S13/S18 ALIDE_RS19700 PF00444 Ribosomal protein L36 ALIDE_RS19705 PF00344 SecY translocase ALIDE_RS19710 PF00828 Ribosomal protein L18e/L15 ALIDE_RS19715 PF00327 Ribosomal protein L30p/L7e ALIDE_RS19720 PF00333 Ribosomal protein S5, N-terminal domain ALIDE_RS19720 PF03719 Ribosomal protein S5, C-terminal domain ALIDE_RS19725 PF00861 Ribosomal L18p/L5e family ALIDE_RS19730 PF00347 Ribosomal protein L6 ALIDE_RS19735 PF00410 Ribosomal protein S8 ALIDE_RS19740 PF00253 Ribosomal protein S14p/S29e ALIDE_RS19745 PF00281 Ribosomal protein L5 ALIDE_RS19745 PF00673 ribosomal L5P family C-terminus ALIDE_RS19750 PF00467 KOW motif ALIDE_RS19750 PF17136 ALIDE_RS19750 ALIDE_RS19755 PF00238 Ribosomal protein L14p/L23e ALIDE_RS19760 PF01266 FAD dependent oxidoreductase ALIDE_RS19760 PF16901 ALIDE_RS19760 ALIDE_RS19765 PF00455 ALIDE_RS19765 ALIDE_RS19765 PF08220 DeoR-like helix-turn-helix domain ALIDE_RS19770 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ALIDE_RS19770 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ALIDE_RS19775 PF03807 NADP oxidoreductase coenzyme F420-dependent ALIDE_RS19775 PF14748 Pyrroline-5-carboxylate reductase dimerisation ALIDE_RS19780 PF08757 ALIDE_RS19780 ALIDE_RS19785 PF01040 UbiA prenyltransferase family ALIDE_RS19790 PF00210 Ferritin-like domain ALIDE_RS19795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS19795 PF03466 LysR substrate binding domain ALIDE_RS19800 PF00270 DEAD/DEAH box helicase ALIDE_RS19800 PF00271 Helicase conserved C-terminal domain ALIDE_RS19800 PF17191 ALIDE_RS19800 ALIDE_RS19805 PF01966 HD domain ALIDE_RS19805 PF11871 ALIDE_RS19805 ALIDE_RS19810 PF02547 Queuosine biosynthesis protein ALIDE_RS19815 PF00892 EamA-like transporter family ALIDE_RS19820 PF01019 Gamma-glutamyltranspeptidase ALIDE_RS19825 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS19830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS19830 PF03466 LysR substrate binding domain ALIDE_RS19835 PF03167 Uracil DNA glycosylase superfamily ALIDE_RS19840 PF00218 Indole-3-glycerol phosphate synthase ALIDE_RS19845 PF00591 Glycosyl transferase family, a/b domain ALIDE_RS19845 PF02885 Glycosyl transferase family, helical bundle domain ALIDE_RS19850 PF00117 Glutamine amidotransferase class-I ALIDE_RS19860 PF05930 Prophage CP4-57 regulatory protein (AlpA) ALIDE_RS19865 PF13614 AAA domain ALIDE_RS19880 PF11198 ALIDE_RS19880 ALIDE_RS19890 PF08900 ALIDE_RS19890 ALIDE_RS19895 PF11358 ALIDE_RS19895 ALIDE_RS19900 PF00436 Single-strand binding protein family ALIDE_RS19905 PF01131 DNA topoisomerase ALIDE_RS19905 PF01751 Toprim domain ALIDE_RS19910 PF01695 IstB-like ATP binding protein ALIDE_RS19915 PF00665 Integrase core domain ALIDE_RS19940 PF00271 Helicase conserved C-terminal domain ALIDE_RS19960 PF01464 Transglycosylase SLT domain ALIDE_RS19965 PF11072 ALIDE_RS19965 ALIDE_RS19970 PF12696 TraM recognition site of TraD and TraG ALIDE_RS19975 PF14348 ALIDE_RS19975 ALIDE_RS19980 PF09686 ALIDE_RS19980 ALIDE_RS19985 PF11660 ALIDE_RS19985 ALIDE_RS19990 PF11190 ALIDE_RS19990 ALIDE_RS19995 PF11990 ALIDE_RS19995 ALIDE_RS20000 PF11444 ALIDE_RS20000 ALIDE_RS20005 PF11920 ALIDE_RS20005 ALIDE_RS20020 PF11130 ALIDE_RS20020 ALIDE_RS20025 PF13462 Thioredoxin ALIDE_RS20030 PF04002 RadC-like JAB domain ALIDE_RS20035 PF07511 ALIDE_RS20035 ALIDE_RS20040 PF06834 ALIDE_RS20040 ALIDE_RS20055 PF07916 ALIDE_RS20055 ALIDE_RS20060 PF12553 ALIDE_RS20060 ALIDE_RS20065 PF08808 ALIDE_RS20065 ALIDE_RS20075 PF07514 Putative helicase ALIDE_RS20075 PF07515 Protein of unknown function (DUF1528) ALIDE_RS20080 PF13521 AAA domain ALIDE_RS20090 PF12697 Alpha/beta hydrolase family ALIDE_RS20095 PF13387 ALIDE_RS20095 ALIDE_RS20100 PF00665 Integrase core domain ALIDE_RS20105 PF01695 IstB-like ATP binding protein ALIDE_RS20120 PF08808 ALIDE_RS20120 ALIDE_RS20125 PF09722 ALIDE_RS20125 ALIDE_RS20130 PF01817 Chorismate mutase type II ALIDE_RS20135 PF00425 chorismate binding enzyme ALIDE_RS20135 PF04715 Anthranilate synthase component I, N terminal region ALIDE_RS20140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS20140 PF00672 HAMP domain ALIDE_RS20140 PF12729 ALIDE_RS20140 ALIDE_RS20145 PF00563 EAL domain ALIDE_RS20145 PF00672 HAMP domain ALIDE_RS20145 PF00989 PAS fold ALIDE_RS20145 PF00990 GGDEF domain ALIDE_RS20145 PF13426 PAS domain ALIDE_RS20145 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ALIDE_RS20150 PF13419 Haloacid dehalogenase-like hydrolase ALIDE_RS20160 PF00834 Ribulose-phosphate 3 epimerase family ALIDE_RS20165 PF04379 Protein of unknown function (DUF525) ALIDE_RS20170 PF10136 ALIDE_RS20170 ALIDE_RS20175 PF00999 Sodium/hydrogen exchanger family ALIDE_RS20180 PF04107 Glutamate-cysteine ligase family 2(GCS2) ALIDE_RS20185 PF00586 AIR synthase related protein, N-terminal domain ALIDE_RS20185 PF02769 AIR synthase related protein, C-terminal domain ALIDE_RS20190 PF00440 Bacterial regulatory proteins, tetR family ALIDE_RS20195 PF07167 ALIDE_RS20195 ALIDE_RS20195 PF12551 ALIDE_RS20195 ALIDE_RS20200 PF02321 Outer membrane efflux protein ALIDE_RS20205 PF13437 HlyD family secretion protein ALIDE_RS20210 PF00005 ABC transporter ALIDE_RS20210 PF12698 ABC-2 family transporter protein ALIDE_RS20215 PF12698 ABC-2 family transporter protein ALIDE_RS20220 PF01515 Phosphate acetyl/butaryl transferase ALIDE_RS20220 PF01575 MaoC like domain ALIDE_RS20225 PF00871 Acetokinase family ALIDE_RS20230 PF04608 Phosphatidylglycerophosphatase A ALIDE_RS20235 PF02464 Competence-damaged protein ALIDE_RS20240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS20240 PF00672 HAMP domain ALIDE_RS20240 PF02203 Tar ligand binding domain homologue ALIDE_RS20245 PF00563 EAL domain ALIDE_RS20245 PF00672 HAMP domain ALIDE_RS20245 PF00990 GGDEF domain ALIDE_RS20245 PF02203 Tar ligand binding domain homologue ALIDE_RS20250 PF00072 Response regulator receiver domain ALIDE_RS20250 PF03861 ANTAR domain ALIDE_RS20255 PF07568 ALIDE_RS20255 ALIDE_RS20255 PF13426 PAS domain ALIDE_RS20260 PF02810 SEC-C motif ALIDE_RS20260 PF03695 Uncharacterised protein family (UPF0149) ALIDE_RS20265 PF13470 ALIDE_RS20265 ALIDE_RS20270 PF01170 Putative RNA methylase family UPF0020 ALIDE_RS20270 PF02926 THUMP domain ALIDE_RS20275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS20275 PF00672 HAMP domain ALIDE_RS20275 PF02743 Cache domain ALIDE_RS20280 PF13279 Thioesterase-like superfamily ALIDE_RS20285 PF00309 ALIDE_RS20285 ALIDE_RS20285 PF04552 Sigma-54, DNA binding domain ALIDE_RS20285 PF04963 Sigma-54 factor, core binding domain ALIDE_RS20290 PF00005 ABC transporter ALIDE_RS20290 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS20295 PF03968 OstA-like protein ALIDE_RS20300 PF01323 DSBA-like thioredoxin domain ALIDE_RS20305 PF05036 Sporulation related domain ALIDE_RS20310 PF00750 tRNA synthetases class I (R) ALIDE_RS20310 PF03485 Arginyl tRNA synthetase N terminal domain ALIDE_RS20310 PF05746 DALR anticodon binding domain ALIDE_RS20315 PF07769 ALIDE_RS20315 ALIDE_RS20320 PF09980 ALIDE_RS20320 ALIDE_RS20325 PF00375 Sodium:dicarboxylate symporter family ALIDE_RS20330 PF00072 Response regulator receiver domain ALIDE_RS20330 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS20330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS20330 PF02743 Cache domain ALIDE_RS20330 PF12860 ALIDE_RS20330 ALIDE_RS20335 PF00072 Response regulator receiver domain ALIDE_RS20335 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS20340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS20340 PF03466 LysR substrate binding domain ALIDE_RS20345 PF01274 Malate synthase ALIDE_RS20350 PF01361 Tautomerase enzyme ALIDE_RS20355 PF02596 ALIDE_RS20355 ALIDE_RS20360 PF13230 Glutamine amidotransferases class-II ALIDE_RS20390 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ALIDE_RS20390 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ALIDE_RS20395 PF03594 ALIDE_RS20395 ALIDE_RS20400 PF02705 ALIDE_RS20400 ALIDE_RS20405 PF08886 Glutamate-cysteine ligase ALIDE_RS20410 PF02386 Cation transport protein ALIDE_RS20415 PF02080 TrkA-C domain ALIDE_RS20415 PF02254 TrkA-N domain ALIDE_RS20420 PF00171 Aldehyde dehydrogenase family ALIDE_RS20435 PF01400 Astacin (Peptidase family M12A) ALIDE_RS20445 PF06144 DNA polymerase III, delta subunit ALIDE_RS20450 PF04390 Lipopolysaccharide-assembly ALIDE_RS20455 PF00133 tRNA synthetases class I (I, L, M and V) ALIDE_RS20455 PF08264 Anticodon-binding domain of tRNA ALIDE_RS20455 PF09334 tRNA synthetases class I (M) ALIDE_RS20455 PF13603 Leucyl-tRNA synthetase, Domain 2 ALIDE_RS20460 PF00924 Mechanosensitive ion channel ALIDE_RS20465 PF00171 Aldehyde dehydrogenase family ALIDE_RS20470 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS20475 PF00158 Sigma-54 interaction domain ALIDE_RS20475 PF01590 GAF domain ALIDE_RS20475 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS20480 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE_RS20485 PF00563 EAL domain ALIDE_RS20485 PF00989 PAS fold ALIDE_RS20485 PF00990 GGDEF domain ALIDE_RS20485 PF13185 GAF domain ALIDE_RS20490 PF02472 Biopolymer transport protein ExbD/TolR ALIDE_RS20495 PF01618 ALIDE_RS20495 ALIDE_RS20500 PF01113 Dihydrodipicolinate reductase, N-terminus ALIDE_RS20500 PF05173 Dihydrodipicolinate reductase, C-terminus ALIDE_RS20505 PF04355 SmpA / OmlA family ALIDE_RS20510 PF01475 Ferric uptake regulator family ALIDE_RS20515 PF02603 HPr Serine kinase N terminus ALIDE_RS20515 PF07475 HPr Serine kinase C-terminal domain ALIDE_RS20520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ALIDE_RS20525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ALIDE_RS20530 PF01259 SAICAR synthetase ALIDE_RS20535 PF00085 Thioredoxin ALIDE_RS20535 PF14559 Tetratricopeptide repeat ALIDE_RS20535 PF14561 Tetratricopeptide repeat ALIDE_RS20540 PF00731 AIR carboxylase ALIDE_RS20545 PF02222 ATP-grasp domain ALIDE_RS20550 PF01300 Telomere recombination ALIDE_RS20550 PF03481 Putative GTP-binding controlling metal-binding ALIDE_RS20565 PF03008 ALIDE_RS20565 ALIDE_RS20575 PF13280 ALIDE_RS20575 ALIDE_RS20595 PF12760 Transposase zinc-ribbon domain ALIDE_RS20595 PF12762 ALIDE_RS20595 ALIDE_RS20600 PF01609 Transposase DDE domain ALIDE_RS20600 PF05598 ALIDE_RS20600 ALIDE_RS20615 PF03922 OmpW family ALIDE_RS20625 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ALIDE_RS20630 PF00814 Glycoprotease family ALIDE_RS20635 PF00583 Acetyltransferase (GNAT) family ALIDE_RS20645 PF01544 CorA-like Mg2+ transporter protein ALIDE_RS20660 PF01048 Phosphorylase superfamily ALIDE_RS20665 PF00501 AMP-binding enzyme ALIDE_RS20665 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS20670 PF02233 NAD(P) transhydrogenase beta subunit ALIDE_RS20675 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ALIDE_RS20675 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ALIDE_RS20675 PF12769 Domain of unknown function (DUF3814) ALIDE_RS20685 PF01116 Fructose-bisphosphate aldolase class-II ALIDE_RS20690 PF00224 Pyruvate kinase, barrel domain ALIDE_RS20690 PF02887 Pyruvate kinase, alpha/beta domain ALIDE_RS20695 PF00557 Metallopeptidase family M24 ALIDE_RS20695 PF05195 Aminopeptidase P, N-terminal domain ALIDE_RS20700 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS20705 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS20710 PF02515 CoA-transferase family III ALIDE_RS20715 PF02803 Thiolase, C-terminal domain ALIDE_RS20720 PF01796 ALIDE_RS20720 ALIDE_RS20720 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) ALIDE_RS20725 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS20730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS20730 PF03466 LysR substrate binding domain ALIDE_RS20735 PF12804 MobA-like NTP transferase domain ALIDE_RS20740 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE_RS20740 PF02779 Transketolase, pyrimidine binding domain ALIDE_RS20740 PF02780 Transketolase, C-terminal domain ALIDE_RS20745 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALIDE_RS20745 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ALIDE_RS20750 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ALIDE_RS20755 PF07722 Peptidase C26 ALIDE_RS20760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS20760 PF03466 LysR substrate binding domain ALIDE_RS20765 PF04909 Amidohydrolase ALIDE_RS20770 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS20775 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS20780 PF02627 Carboxymuconolactone decarboxylase family ALIDE_RS20790 PF03929 ALIDE_RS20790 ALIDE_RS20795 PF00593 TonB dependent receptor ALIDE_RS20795 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS20805 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS20815 PF07287 ALIDE_RS20815 ALIDE_RS20820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS20820 PF03466 LysR substrate binding domain ALIDE_RS20825 PF06445 GyrI-like small molecule binding domain ALIDE_RS20830 PF00106 short chain dehydrogenase ALIDE_RS20840 PF03942 ALIDE_RS20840 ALIDE_RS20845 PF01614 Bacterial transcriptional regulator ALIDE_RS20845 PF09339 IclR helix-turn-helix domain ALIDE_RS20850 PF00108 Thiolase, N-terminal domain ALIDE_RS20855 PF01796 ALIDE_RS20855 ALIDE_RS20855 PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) ALIDE_RS20860 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS20865 PF13380 CoA binding domain ALIDE_RS20865 PF13549 ATP-grasp domain ALIDE_RS20865 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE_RS20870 PF00043 Glutathione S-transferase, C-terminal domain ALIDE_RS20870 PF02798 Glutathione S-transferase, N-terminal domain ALIDE_RS20875 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS20880 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE_RS20885 PF01131 DNA topoisomerase ALIDE_RS20885 PF01751 Toprim domain ALIDE_RS20885 PF02201 SWIB/MDM2 domain ALIDE_RS20885 PF13342 ALIDE_RS20885 ALIDE_RS20890 PF00856 SET domain ALIDE_RS20895 PF02237 Biotin protein ligase C terminal domain ALIDE_RS20895 PF03099 Biotin/lipoate A/B protein ligase family ALIDE_RS20905 PF00107 Zinc-binding dehydrogenase ALIDE_RS20905 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS20910 PF01575 MaoC like domain ALIDE_RS20915 PF13452 N-terminal half of MaoC dehydratase ALIDE_RS20920 PF13458 Periplasmic binding protein ALIDE_RS20925 PF00501 AMP-binding enzyme ALIDE_RS20925 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS20925 PF16177 ALIDE_RS20925 ALIDE_RS20930 PF12802 MarR family ALIDE_RS20935 PF09722 ALIDE_RS20935 ALIDE_RS20940 PF08808 ALIDE_RS20940 ALIDE_RS20945 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain ALIDE_RS20945 PF02558 Ketopantoate reductase PanE/ApbA ALIDE_RS20950 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS20955 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS20955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS20955 PF08521 ALIDE_RS20955 ALIDE_RS20960 PF00072 Response regulator receiver domain ALIDE_RS20960 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS20965 PF00266 Aminotransferase class-V ALIDE_RS20970 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS20975 PF00005 ABC transporter ALIDE_RS20980 PF13343 Bacterial extracellular solute-binding protein ALIDE_RS20985 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS20985 PF07729 FCD domain ALIDE_RS20990 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ALIDE_RS20995 PF00171 Aldehyde dehydrogenase family ALIDE_RS21005 PF01266 FAD dependent oxidoreductase ALIDE_RS21010 PF00842 Alanine racemase, C-terminal domain ALIDE_RS21010 PF01168 Alanine racemase, N-terminal domain ALIDE_RS21015 PF01266 FAD dependent oxidoreductase ALIDE_RS21020 PF01037 AsnC family ALIDE_RS21020 PF13412 Winged helix-turn-helix DNA-binding ALIDE_RS21025 PF13463 Winged helix DNA-binding domain ALIDE_RS21030 PF00154 recA bacterial DNA recombination protein ALIDE_RS21035 PF02631 RecX family ALIDE_RS21040 PF07793 ALIDE_RS21040 ALIDE_RS21045 PF02355 Protein export membrane protein ALIDE_RS21045 PF07549 SecD/SecF GG Motif ALIDE_RS21050 PF02355 Protein export membrane protein ALIDE_RS21050 PF07549 SecD/SecF GG Motif ALIDE_RS21050 PF13721 SecD export protein N-terminal TM region ALIDE_RS21055 PF02699 Preprotein translocase subunit ALIDE_RS21060 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ALIDE_RS21060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE_RS21065 PF01037 AsnC family ALIDE_RS21065 PF13412 Winged helix-turn-helix DNA-binding ALIDE_RS21070 PF05977 Transmembrane secretion effector ALIDE_RS21075 PF03562 MltA specific insert domain ALIDE_RS21075 PF06725 3D domain ALIDE_RS21080 PF00691 OmpA family ALIDE_RS21080 PF13488 ALIDE_RS21080 ALIDE_RS21085 PF00072 Response regulator receiver domain ALIDE_RS21085 PF00196 Bacterial regulatory proteins, luxR family ALIDE_RS21090 PF00989 PAS fold ALIDE_RS21090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS21095 PF00795 Carbon-nitrogen hydrolase ALIDE_RS21100 PF13116 ALIDE_RS21100 ALIDE_RS21100 PF13502 ALIDE_RS21100 ALIDE_RS21105 PF03710 Glutamate-ammonia ligase adenylyltransferase ALIDE_RS21105 PF08335 GlnD PII-uridylyltransferase ALIDE_RS21110 PF16576 ALIDE_RS21110 ALIDE_RS21115 PF00873 AcrB/AcrD/AcrF family ALIDE_RS21120 PF13410 Glutathione S-transferase, C-terminal domain ALIDE_RS21120 PF13417 Glutathione S-transferase, N-terminal domain ALIDE_RS21125 PF00206 Lyase ALIDE_RS21125 PF08328 Adenylosuccinate lyase C-terminal ALIDE_RS21130 PF07152 YaeQ protein ALIDE_RS21135 PF09413 Domain of unknown function (DUF2007) ALIDE_RS21140 PF06945 ALIDE_RS21140 ALIDE_RS21140 PF12512 ALIDE_RS21140 ALIDE_RS21145 PF03741 ALIDE_RS21145 ALIDE_RS21155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS21155 PF03466 LysR substrate binding domain ALIDE_RS21160 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21170 PF04020 ALIDE_RS21170 ALIDE_RS21175 PF01435 Peptidase family M48 ALIDE_RS21180 PF01967 MoaC family ALIDE_RS21190 PF12706 Beta-lactamase superfamily domain ALIDE_RS21195 PF00498 FHA domain ALIDE_RS21200 PF13672 Protein phosphatase 2C ALIDE_RS21205 PF03741 ALIDE_RS21205 ALIDE_RS21210 PF00549 CoA-ligase ALIDE_RS21210 PF02629 CoA binding domain ALIDE_RS21215 PF00549 CoA-ligase ALIDE_RS21215 PF08442 ATP-grasp domain ALIDE_RS21220 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALIDE_RS21225 PF02481 DNA recombination-mediator protein A ALIDE_RS21230 PF01476 LysM domain ALIDE_RS21235 PF01327 Polypeptide deformylase ALIDE_RS21245 PF00551 Formyl transferase ALIDE_RS21245 PF02911 Formyl transferase, C-terminal domain ALIDE_RS21250 PF03591 ALIDE_RS21250 ALIDE_RS21255 PF05437 ALIDE_RS21255 ALIDE_RS21260 PF00162 Phosphoglycerate kinase ALIDE_RS21275 PF00892 EamA-like transporter family ALIDE_RS21280 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ALIDE_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS21285 PF03466 LysR substrate binding domain ALIDE_RS21290 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21295 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ALIDE_RS21300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS21300 PF00672 HAMP domain ALIDE_RS21300 PF08376 Nitrate and nitrite sensing ALIDE_RS21305 PF00005 ABC transporter ALIDE_RS21310 PF07690 Major Facilitator Superfamily ALIDE_RS21315 PF00436 Single-strand binding protein family ALIDE_RS21320 PF01614 Bacterial transcriptional regulator ALIDE_RS21320 PF09339 IclR helix-turn-helix domain ALIDE_RS21325 PF02515 CoA-transferase family III ALIDE_RS21330 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21335 PF03061 Thioesterase superfamily ALIDE_RS21340 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21345 PF13561 Enoyl-(Acyl carrier protein) reductase ALIDE_RS21350 PF13452 N-terminal half of MaoC dehydratase ALIDE_RS21355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS21355 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS21355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS21360 PF02515 CoA-transferase family III ALIDE_RS21365 PF00378 Enoyl-CoA hydratase/isomerase family ALIDE_RS21370 PF02652 ALIDE_RS21370 ALIDE_RS21375 PF03054 tRNA methyl transferase ALIDE_RS21380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS21380 PF03466 LysR substrate binding domain ALIDE_RS21385 PF04303 PrpF protein ALIDE_RS21390 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21395 PF13609 Gram-negative porin ALIDE_RS21400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS21400 PF03466 LysR substrate binding domain ALIDE_RS21405 PF00890 FAD binding domain ALIDE_RS21415 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21420 PF00158 Sigma-54 interaction domain ALIDE_RS21420 PF02954 Bacterial regulatory protein, Fis family ALIDE_RS21425 PF01039 Carboxyl transferase domain ALIDE_RS21430 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21435 PF13380 CoA binding domain ALIDE_RS21435 PF13549 ATP-grasp domain ALIDE_RS21435 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE_RS21440 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain ALIDE_RS21440 PF02785 Biotin carboxylase C-terminal domain ALIDE_RS21440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE_RS21445 PF00364 Biotin-requiring enzyme ALIDE_RS21450 PF03061 Thioesterase superfamily ALIDE_RS21455 PF00293 NUDIX domain ALIDE_RS21465 PF00593 TonB dependent receptor ALIDE_RS21465 PF07715 TonB-dependent Receptor Plug Domain ALIDE_RS21470 PF03061 Thioesterase superfamily ALIDE_RS21475 PF01614 Bacterial transcriptional regulator ALIDE_RS21475 PF09339 IclR helix-turn-helix domain ALIDE_RS21480 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21485 PF02515 CoA-transferase family III ALIDE_RS21490 PF13452 N-terminal half of MaoC dehydratase ALIDE_RS21495 PF00501 AMP-binding enzyme ALIDE_RS21495 PF13193 AMP-binding enzyme C-terminal domain ALIDE_RS21500 PF00677 Lumazine binding domain ALIDE_RS21505 PF01810 ALIDE_RS21505 ALIDE_RS21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS21515 PF00072 Response regulator receiver domain ALIDE_RS21515 PF00486 Transcriptional regulatory protein, C terminal ALIDE_RS21520 PF03413 Peptidase propeptide and YPEB domain ALIDE_RS21525 PF13670 ALIDE_RS21525 ALIDE_RS21530 PF01794 ALIDE_RS21530 ALIDE_RS21530 PF08022 ALIDE_RS21530 ALIDE_RS21535 PF01292 Prokaryotic cytochrome b561 ALIDE_RS21540 PF13670 ALIDE_RS21540 ALIDE_RS21545 PF10029 ALIDE_RS21545 ALIDE_RS21550 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS21550 PF00258 Flavodoxin ALIDE_RS21550 PF00970 Oxidoreductase FAD-binding domain ALIDE_RS21550 PF03929 ALIDE_RS21550 ALIDE_RS21555 PF02424 ApbE family ALIDE_RS21570 PF00122 E1-E2 ATPase ALIDE_RS21570 PF00689 Cation transporting ATPase, C-terminus ALIDE_RS21570 PF00690 Cation transporter/ATPase, N-terminus ALIDE_RS21570 PF00702 haloacid dehalogenase-like hydrolase ALIDE_RS21580 PF03060 Nitronate monooxygenase ALIDE_RS21585 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS21590 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS21590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS21595 PF01614 Bacterial transcriptional regulator ALIDE_RS21595 PF09339 IclR helix-turn-helix domain ALIDE_RS21600 PF02515 CoA-transferase family III ALIDE_RS21605 PF00107 Zinc-binding dehydrogenase ALIDE_RS21605 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE_RS21610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE_RS21610 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE_RS21610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS21615 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21620 PF01614 Bacterial transcriptional regulator ALIDE_RS21620 PF09339 IclR helix-turn-helix domain ALIDE_RS21625 PF02515 CoA-transferase family III ALIDE_RS21630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS21630 PF03466 LysR substrate binding domain ALIDE_RS21635 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE_RS21640 PF01019 Gamma-glutamyltranspeptidase ALIDE_RS21650 PF01593 Flavin containing amine oxidoreductase ALIDE_RS21655 PF01564 Spermine/spermidine synthase ALIDE_RS21660 PF03994 ALIDE_RS21660 ALIDE_RS21665 PF13785 ALIDE_RS21665 ALIDE_RS21670 PF09851 ALIDE_RS21670 ALIDE_RS21670 PF13421 ALIDE_RS21670 ALIDE_RS21675 PF09834 ALIDE_RS21675 ALIDE_RS21680 PF00460 Flagella basal body rod protein ALIDE_RS21680 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE_RS21685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS21685 PF03466 LysR substrate binding domain ALIDE_RS21690 PF00202 Aminotransferase class-III ALIDE_RS21695 PF00171 Aldehyde dehydrogenase family ALIDE_RS21700 PF00990 GGDEF domain ALIDE_RS21700 PF05230 ALIDE_RS21700 ALIDE_RS21705 PF00392 Bacterial regulatory proteins, gntR family ALIDE_RS21705 PF07729 FCD domain ALIDE_RS21710 PF13458 Periplasmic binding protein ALIDE_RS21715 PF02653 ALIDE_RS21715 ALIDE_RS21720 PF02653 ALIDE_RS21720 ALIDE_RS21725 PF00005 ABC transporter ALIDE_RS21725 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE_RS21730 PF00005 ABC transporter ALIDE_RS21735 PF01546 Peptidase family M20/M25/M40 ALIDE_RS21735 PF07687 Peptidase dimerisation domain ALIDE_RS21740 PF07171 MlrC C-terminus ALIDE_RS21740 PF07364 Protein of unknown function (DUF1485) ALIDE_RS21745 PF00390 Malic enzyme, N-terminal domain ALIDE_RS21745 PF01515 Phosphate acetyl/butaryl transferase ALIDE_RS21745 PF03949 Malic enzyme, NAD binding domain ALIDE_RS21745 PF12434 ALIDE_RS21745 ALIDE_RS21750 PF00545 ribonuclease ALIDE_RS21755 PF01337 Barstar (barnase inhibitor) ALIDE_RS21760 PF00398 Ribosomal RNA adenine dimethylase ALIDE_RS21765 PF00639 PPIC-type PPIASE domain ALIDE_RS21765 PF09312 SurA N-terminal domain ALIDE_RS21770 PF04453 Organic solvent tolerance protein ALIDE_RS21775 PF01636 Phosphotransferase enzyme family ALIDE_RS21780 PF04452 RNA methyltransferase ALIDE_RS21795 PF13555 P-loop containing region of AAA domain ALIDE_RS21800 PF01546 Peptidase family M20/M25/M40 ALIDE_RS21800 PF07687 Peptidase dimerisation domain ALIDE_RS21805 PF00990 GGDEF domain ALIDE_RS21815 PF10546 ALIDE_RS21815 ALIDE_RS21820 PF07021 Methionine biosynthesis protein MetW ALIDE_RS21825 PF00561 alpha/beta hydrolase fold ALIDE_RS21830 PF01169 ALIDE_RS21830 ALIDE_RS21835 PF00076 RNA recognition motif ALIDE_RS21840 PF00076 RNA recognition motif ALIDE_RS21845 PF00106 short chain dehydrogenase ALIDE_RS21850 PF06835 Lipopolysaccharide-assembly, LptC-related ALIDE_RS21855 PF08282 haloacid dehalogenase-like hydrolase ALIDE_RS21860 PF00571 CBS domain ALIDE_RS21860 PF01380 SIS domain ALIDE_RS21865 PF00999 Sodium/hydrogen exchanger family ALIDE_RS21865 PF02080 TrkA-C domain ALIDE_RS21865 PF02254 TrkA-N domain ALIDE_RS21870 PF00156 Phosphoribosyl transferase domain ALIDE_RS21880 PF00027 Cyclic nucleotide-binding domain ALIDE_RS21885 PF01926 50S ribosome-binding GTPase ALIDE_RS21885 PF10396 GTP-binding protein TrmE N-terminus ALIDE_RS21885 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE ALIDE_RS21890 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE_RS21895 PF01266 FAD dependent oxidoreductase ALIDE_RS21900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS21900 PF03466 LysR substrate binding domain ALIDE_RS21905 PF01177 Asp/Glu/Hydantoin racemase ALIDE_RS21910 PF04951 D-aminopeptidase ALIDE_RS21915 PF03576 Peptidase family S58 ALIDE_RS21920 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS21920 PF12911 ALIDE_RS21920 ALIDE_RS21925 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE_RS21930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE_RS21935 PF00005 ABC transporter ALIDE_RS21935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE_RS21940 PF01112 Asparaginase ALIDE_RS21945 PF01380 SIS domain ALIDE_RS21945 PF01418 Helix-turn-helix domain, rpiR family ALIDE_RS21960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE_RS21965 PF02096 60Kd inner membrane protein ALIDE_RS21965 PF14849 YidC periplasmic domain ALIDE_RS21970 PF01809 ALIDE_RS21970 ALIDE_RS21975 PF00825 Ribonuclease P ALIDE_RS21980 PF00468 Ribosomal protein L34 ALIDE_RS22015 PF00986 DNA gyrase B subunit, carboxyl terminus ALIDE_RS22030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE_RS22170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE_RS22230 PF08521 ALIDE_RS22230 ALIDE_RS22270 PF01134 Glucose inhibited division protein A ALIDE_RS22270 PF13932 GidA associated domain 3 ALIDE_RS22340 PF02913 FAD linked oxidases, C-terminal domain ALIDE_RS22600 PF01039 Carboxyl transferase domain ALIDE_RS22685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE_RS22750 PF13411 MerR HTH family regulatory protein ALIDE_RS22895 PF00924 Mechanosensitive ion channel ALIDE_RS22930 PF04233 ALIDE_RS22930 ALIDE_RS22985 PF00353 Hemolysin-type calcium-binding repeat (2 copies) ALIDE_RS22985 PF06594 ALIDE_RS22985 ALIDE_RS22985 PF12760 Transposase zinc-ribbon domain ALIDE_RS23010 PF04404 ALIDE_RS23010 ALIDE_RS23015 PF00717 Peptidase S24-like ALIDE_RS23030 PF00589 Phage integrase family ALIDE_RS23040 PF13362 Toprim domain ALIDE_RS23045 PF06252 ALIDE_RS23045 ALIDE_RS23050 PF07022 Bacteriophage CI repressor helix-turn-helix domain ALIDE_RS23055 PF06791 ALIDE_RS23055 ALIDE_RS23075 PF07471 Phage DNA packaging protein Nu1 ALIDE_RS23090 PF02195 ParB-like nuclease domain ALIDE_RS23095 PF06892 ALIDE_RS23095 ALIDE_RS23110 PF10065 ALIDE_RS23110 ALIDE_RS23125 PF02086 D12 class N6 adenine-specific DNA methyltransferase ALIDE_RS23140 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS23140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE_RS23140 PF08448 PAS fold ALIDE_RS23150 PF02515 CoA-transferase family III ALIDE_RS23155 PF02515 CoA-transferase family III ALIDE_RS23160 PF00175 Oxidoreductase NAD-binding domain ALIDE_RS23165 PF00512 His Kinase A (phospho-acceptor) domain ALIDE_RS23165 PF08448 PAS fold