ALIDE_RS00005 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain ALIDE_RS00010 SM00480 DNA polymerase III beta subunit ALIDE_RS00015 SM00387 Histidine kinase-like ATPases ALIDE_RS00015 SM00433 TopoisomeraseII ALIDE_RS00050 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS00050 SM01209 ALIDE_RS00050 ALIDE_RS00080 SM00487 DEAD-like helicases superfamily ALIDE_RS00080 SM00491 ALIDE_RS00080 ALIDE_RS00085 SM00479 ALIDE_RS00085 ALIDE_RS00100 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS00100 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ALIDE_RS00100 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS00100 SM00091 PAS domain ALIDE_RS00100 SM00267 diguanylate cyclase ALIDE_RS00105 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS00130 SM00881 CoA binding domain ALIDE_RS00140 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS00175 SM00422 helix_turn_helix, mercury resistance ALIDE_RS00190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS00190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS00210 SM00448 cheY-homologous receiver domain ALIDE_RS00210 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS00215 SM00387 Histidine kinase-like ATPases ALIDE_RS00215 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS00240 SM01228 ALIDE_RS00240 ALIDE_RS00270 SM00470 ParB-like nuclease domain ALIDE_RS00285 SM00342 helix_turn_helix, arabinose operon control protein ALIDE_RS00525 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ALIDE_RS00530 SM00903 Flavin reductase like domain ALIDE_RS00580 SM00831 Cation transporter/ATPase, N-terminus ALIDE_RS00610 SM00341 Helicase and RNase D C-terminal ALIDE_RS00610 SM00487 DEAD-like helicases superfamily ALIDE_RS00610 SM00490 helicase superfamily c-terminal domain ALIDE_RS00610 SM00956 ALIDE_RS00610 ALIDE_RS00630 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS00630 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS00630 SM00091 PAS domain ALIDE_RS00630 SM00267 diguanylate cyclase ALIDE_RS00645 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS00705 SM00822 ALIDE_RS00705 ALIDE_RS00720 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS00760 SM00822 ALIDE_RS00760 ALIDE_RS00770 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS00820 SM00822 ALIDE_RS00820 ALIDE_RS00855 SM00829 Enoylreductase ALIDE_RS00925 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS00960 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS01005 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALIDE_RS01025 SM01018 B12 binding domain ALIDE_RS01075 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS01140 SM00448 cheY-homologous receiver domain ALIDE_RS01140 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS01145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS01145 SM00387 Histidine kinase-like ATPases ALIDE_RS01145 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS01160 SM00422 helix_turn_helix, mercury resistance ALIDE_RS01210 SM00530 Helix-turn-helix XRE-family like proteins ALIDE_RS01225 SM00954 Region found in RelA / SpoT proteins ALIDE_RS01235 SM00470 ParB-like nuclease domain ALIDE_RS01300 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS01305 SM00645 Papain family cysteine protease ALIDE_RS01315 SM00965 Secretin and TonB N terminus short domain ALIDE_RS01325 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS01335 SM00938 Nitrogen regulatory protein P-II ALIDE_RS01365 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS01410 SM00881 CoA binding domain ALIDE_RS01430 SM00945 ProQ/FINO family ALIDE_RS01445 SM01005 Alanine racemase, C-terminal domain ALIDE_RS01460 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS01560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS01560 SM00387 Histidine kinase-like ATPases ALIDE_RS01560 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS01565 SM00448 cheY-homologous receiver domain ALIDE_RS01565 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS01575 SM00342 helix_turn_helix, arabinose operon control protein ALIDE_RS01595 SM00342 helix_turn_helix, arabinose operon control protein ALIDE_RS01600 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS01600 SM00895 ALIDE_RS01600 ALIDE_RS01605 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS01605 SM00989 ALIDE_RS01605 ALIDE_RS01680 SM00859 Semialdehyde dehydrogenase, NAD binding domain ALIDE_RS01705 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS01710 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS01775 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS01805 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS01810 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS01820 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS01820 SM00895 ALIDE_RS01820 ALIDE_RS01855 SM00845 GatB domain ALIDE_RS01910 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS01970 SM00347 helix_turn_helix multiple antibiotic resistance protein ALIDE_RS01980 SM01004 Delta-aminolevulinic acid dehydratase ALIDE_RS02010 SM00936 Penicillin-binding protein 5, C-terminal domain ALIDE_RS02025 SM00838 Elongation factor G C-terminus ALIDE_RS02025 SM00889 Elongation factor G, domain IV ALIDE_RS02035 SM01403 ALIDE_RS02035 ALIDE_RS02055 SM01382 ALIDE_RS02055 ALIDE_RS02055 SM01383 ALIDE_RS02055 ALIDE_RS02070 SM00322 K homology RNA-binding domain ALIDE_RS02130 SM00729 Elongator protein 3, MiaB family, Radical SAM ALIDE_RS02180 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS02290 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ALIDE_RS02290 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ALIDE_RS02295 SM00649 Ribosomal protein L11/L12 ALIDE_RS02320 SM00663 RNA polymerase I subunit A N-terminus ALIDE_RS02340 SM00091 PAS domain ALIDE_RS02340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS02340 SM00387 Histidine kinase-like ATPases ALIDE_RS02340 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS02345 SM00448 cheY-homologous receiver domain ALIDE_RS02365 SM00530 Helix-turn-helix XRE-family like proteins ALIDE_RS02380 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS02400 SM00984 UDP binding domain ALIDE_RS02440 SM00749 bacterial OsmY and nodulation domain ALIDE_RS02455 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS02500 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS02500 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS02500 SM00091 PAS domain ALIDE_RS02500 SM00267 diguanylate cyclase ALIDE_RS02515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS02515 SM00387 Histidine kinase-like ATPases ALIDE_RS02520 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS02520 SM00448 cheY-homologous receiver domain ALIDE_RS02535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS02560 SM00947 Carbonic anhydrase ALIDE_RS02595 SM00028 Tetratricopeptide repeats ALIDE_RS02600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS02695 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS02715 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS02725 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS02735 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS02735 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS02740 SM00363 S4 RNA-binding domain ALIDE_RS02745 SM00387 Histidine kinase-like ATPases ALIDE_RS02765 SM00220 Serine/Threonine protein kinases, catalytic domain ALIDE_RS02810 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS02825 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS02825 SM00091 PAS domain ALIDE_RS02825 SM00267 diguanylate cyclase ALIDE_RS02860 SM00829 Enoylreductase ALIDE_RS02880 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ALIDE_RS02905 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS02925 SM01119 ALIDE_RS02925 ALIDE_RS02930 SM00855 Phosphoglycerate mutase family ALIDE_RS02945 SM00905 Dihydroneopterin aldolase ALIDE_RS02950 SM00905 Dihydroneopterin aldolase ALIDE_RS03005 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS03055 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ALIDE_RS03070 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS03085 SM00825 Beta-ketoacyl synthase ALIDE_RS03100 SM01091 Transporter associated domain ALIDE_RS03110 SM00344 helix_turn_helix ASNC type ALIDE_RS03130 SM00861 Transketolase, pyrimidine binding domain ALIDE_RS03160 SM00563 Phosphate acyltransferases ALIDE_RS03170 SM00450 Rhodanese Homology Domain ALIDE_RS03175 SM00257 Lysin motif ALIDE_RS03320 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS03400 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS03455 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS03470 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS03495 SM00996 S-adenosyl-L-homocysteine hydrolase ALIDE_RS03495 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ALIDE_RS03550 SM00363 S4 RNA-binding domain ALIDE_RS03565 SM00387 Histidine kinase-like ATPases ALIDE_RS03575 SM00271 DnaJ molecular chaperone homology domain ALIDE_RS03580 SM00344 helix_turn_helix ASNC type ALIDE_RS03630 SM00448 cheY-homologous receiver domain ALIDE_RS03630 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS03635 SM00387 Histidine kinase-like ATPases ALIDE_RS03635 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS03675 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS03720 SM00984 UDP binding domain ALIDE_RS03760 SM00984 UDP binding domain ALIDE_RS03815 SM00387 Histidine kinase-like ATPases ALIDE_RS03815 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS03820 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS03820 SM00448 cheY-homologous receiver domain ALIDE_RS03825 SM00028 Tetratricopeptide repeats ALIDE_RS03875 SM01209 ALIDE_RS03875 ALIDE_RS03885 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS03900 SM00838 Elongation factor G C-terminus ALIDE_RS03900 SM00889 Elongation factor G, domain IV ALIDE_RS03925 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS03980 SM00855 Phosphoglycerate mutase family ALIDE_RS04030 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04035 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04065 SM00883 Chaperonin 10 Kd subunit ALIDE_RS04105 SM01329 ALIDE_RS04105 ALIDE_RS04145 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS04155 SM01219 ALIDE_RS04155 ALIDE_RS04185 SM00965 Secretin and TonB N terminus short domain ALIDE_RS04200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ALIDE_RS04230 SM01321 ALIDE_RS04230 ALIDE_RS04245 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS04245 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ALIDE_RS04255 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04275 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04305 SM00091 PAS domain ALIDE_RS04305 SM00267 diguanylate cyclase ALIDE_RS04310 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ALIDE_RS04515 SM00957 SecA DEAD-like domain ALIDE_RS04515 SM00958 SecA preprotein cross-linking domain ALIDE_RS04560 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04615 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ALIDE_RS04635 SM01091 Transporter associated domain ALIDE_RS04640 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04655 SM00937 ALIDE_RS04655 ALIDE_RS04695 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04740 SM00978 ALIDE_RS04740 ALIDE_RS04795 SM01034 Sensors of blue-light using FAD ALIDE_RS04805 SM00387 Histidine kinase-like ATPases ALIDE_RS04805 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS04810 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS04810 SM00448 cheY-homologous receiver domain ALIDE_RS04845 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04850 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04880 SM01400 ALIDE_RS04880 ALIDE_RS04900 SM00028 Tetratricopeptide repeats ALIDE_RS04905 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ALIDE_RS04905 SM01232 ALIDE_RS04905 ALIDE_RS04915 SM00478 endonuclease III ALIDE_RS04915 SM00525 ALIDE_RS04915 ALIDE_RS04970 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS04975 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS04980 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS04995 SM00796 Allophanate hydrolase subunit 1 ALIDE_RS05000 SM00797 Allophanate hydrolase subunit 2 ALIDE_RS05015 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS05030 SM00729 Elongator protein 3, MiaB family, Radical SAM ALIDE_RS05045 SM00331 Sigma factor PP2C-like phosphatases ALIDE_RS05045 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ALIDE_RS05050 SM00220 Serine/Threonine protein kinases, catalytic domain ALIDE_RS05125 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS05150 SM00072 Guanylate kinase homologues. ALIDE_RS05155 SM01409 ALIDE_RS05155 ALIDE_RS05160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ALIDE_RS05160 SM00954 Region found in RelA / SpoT proteins ALIDE_RS05180 SM01387 ALIDE_RS05180 ALIDE_RS05185 SM00316 Ribosomal protein S1-like RNA-binding domain ALIDE_RS05185 SM00322 K homology RNA-binding domain ALIDE_RS05190 SM00829 Enoylreductase ALIDE_RS05235 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ALIDE_RS05240 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ALIDE_RS05295 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALIDE_RS05300 SM00853 MutL C terminal dimerisation domain ALIDE_RS05300 SM01340 ALIDE_RS05300 ALIDE_RS05330 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ALIDE_RS05335 SM01092 CO dehydrogenase flavoprotein C-terminal domain ALIDE_RS05345 SM00646 ALIDE_RS05345 ALIDE_RS05385 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS05390 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS05410 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS05410 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ALIDE_RS05425 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS05435 SM01192 ALIDE_RS05435 ALIDE_RS05435 SM01193 ALIDE_RS05435 ALIDE_RS05475 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. ALIDE_RS05495 SM01130 ALIDE_RS05495 ALIDE_RS05510 SM00387 Histidine kinase-like ATPases ALIDE_RS05510 SM00433 TopoisomeraseII ALIDE_RS05515 SM00434 DNA Topoisomerase IV ALIDE_RS05525 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS05535 SM00450 Rhodanese Homology Domain ALIDE_RS05560 SM00861 Transketolase, pyrimidine binding domain ALIDE_RS05570 SM00487 DEAD-like helicases superfamily ALIDE_RS05570 SM00490 helicase superfamily c-terminal domain ALIDE_RS05605 SM00829 Enoylreductase ALIDE_RS05610 SM00852 Probable molybdopterin binding domain ALIDE_RS05680 SM00487 DEAD-like helicases superfamily ALIDE_RS05680 SM00490 helicase superfamily c-terminal domain ALIDE_RS05695 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS05695 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS05710 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS05720 SM00327 von Willebrand factor (vWF) type A domain ALIDE_RS05745 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ALIDE_RS05760 SM00986 Uracil DNA glycosylase superfamily ALIDE_RS05760 SM00987 UreE urease accessory protein, C-terminal domain ALIDE_RS05770 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS05795 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS05795 SM00267 diguanylate cyclase ALIDE_RS05805 SM00829 Enoylreductase ALIDE_RS05835 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS05855 SM00354 helix_turn _helix lactose operon repressor ALIDE_RS05870 SM00904 Riboflavin kinase ALIDE_RS05875 SM00507 HNH nucleases ALIDE_RS05920 SM00843 ALIDE_RS05920 ALIDE_RS05935 SM00986 Uracil DNA glycosylase superfamily ALIDE_RS05935 SM00987 UreE urease accessory protein, C-terminal domain ALIDE_RS05940 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS05955 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS05960 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06050 SM00479 ALIDE_RS06050 ALIDE_RS06060 SM00487 DEAD-like helicases superfamily ALIDE_RS06060 SM00490 helicase superfamily c-terminal domain ALIDE_RS06065 SM00267 diguanylate cyclase ALIDE_RS06085 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS06085 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS06105 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06405 SM01240 ALIDE_RS06405 ALIDE_RS06420 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS06420 SM00267 diguanylate cyclase ALIDE_RS06445 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ALIDE_RS06445 SM00474 3'-5' exonuclease ALIDE_RS06445 SM00475 5'-3' exonuclease ALIDE_RS06445 SM00482 DNA polymerase A domain ALIDE_RS06500 SM00448 cheY-homologous receiver domain ALIDE_RS06500 SM00850 LytTr DNA-binding domain ALIDE_RS06520 SM00487 DEAD-like helicases superfamily ALIDE_RS06520 SM00490 helicase superfamily c-terminal domain ALIDE_RS06520 SM00982 ALIDE_RS06520 ALIDE_RS06520 SM01058 CarD-like/TRCF domain ALIDE_RS06535 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS06535 SM00387 Histidine kinase-like ATPases ALIDE_RS06535 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS06540 SM00448 cheY-homologous receiver domain ALIDE_RS06540 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS06560 SM00954 Region found in RelA / SpoT proteins ALIDE_RS06575 SM00360 RNA recognition motif ALIDE_RS06585 SM00729 Elongator protein 3, MiaB family, Radical SAM ALIDE_RS06635 SM00400 zinc finger ALIDE_RS06635 SM00493 ALIDE_RS06635 ALIDE_RS06645 SM00155 Phospholipase D. Active site motifs. ALIDE_RS06660 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06675 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06695 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06700 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06745 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06775 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS06780 SM00091 PAS domain ALIDE_RS06780 SM00267 diguanylate cyclase ALIDE_RS06785 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06815 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06825 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS06830 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS06855 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06860 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS06890 SM00899 ALIDE_RS06890 ALIDE_RS07130 SM00507 HNH nucleases ALIDE_RS07190 SM00631 ALIDE_RS07190 ALIDE_RS07195 SM00487 DEAD-like helicases superfamily ALIDE_RS07195 SM00490 helicase superfamily c-terminal domain ALIDE_RS07200 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS07240 SM00422 helix_turn_helix, mercury resistance ALIDE_RS07315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ALIDE_RS07325 SM00935 Outer membrane protein (OmpH-like) ALIDE_RS07390 SM00937 ALIDE_RS07390 ALIDE_RS07415 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS07430 SM01207 ALIDE_RS07430 ALIDE_RS07485 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS07615 SM01126 ALIDE_RS07615 ALIDE_RS07790 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS07795 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS07810 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS07880 SM00450 Rhodanese Homology Domain ALIDE_RS07885 SM00650 Ribosomal RNA adenine dimethylases ALIDE_RS07950 SM00316 Ribosomal protein S1-like RNA-binding domain ALIDE_RS07950 SM00732 Likely ribonuclease with RNase H fold. ALIDE_RS07990 SM00354 helix_turn _helix lactose operon repressor ALIDE_RS08020 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS08050 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS08050 SM00448 cheY-homologous receiver domain ALIDE_RS08055 SM00387 Histidine kinase-like ATPases ALIDE_RS08055 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS08100 SM00248 ankyrin repeats ALIDE_RS08115 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS08115 SM00895 ALIDE_RS08115 ALIDE_RS08135 SM00796 Allophanate hydrolase subunit 1 ALIDE_RS08135 SM00797 Allophanate hydrolase subunit 2 ALIDE_RS08140 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS08145 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS08245 SM00318 Staphylococcal nuclease homologues ALIDE_RS08265 SM00530 Helix-turn-helix XRE-family like proteins ALIDE_RS08515 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS08550 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS08585 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS08610 SM00852 Probable molybdopterin binding domain ALIDE_RS08625 SM00729 Elongator protein 3, MiaB family, Radical SAM ALIDE_RS08655 SM00260 Two component signalling adaptor domain ALIDE_RS08660 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS08660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS08680 SM00938 Nitrogen regulatory protein P-II ALIDE_RS08760 SM00917 LeuA allosteric (dimerisation) domain ALIDE_RS08765 SM00917 LeuA allosteric (dimerisation) domain ALIDE_RS08775 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS08800 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS08800 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS08845 SM00287 Bacterial SH3 domain homologues ALIDE_RS08955 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS08960 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS08975 SM00822 ALIDE_RS08975 ALIDE_RS08995 SM00671 Sel1-like repeats. ALIDE_RS09045 SM00422 helix_turn_helix, mercury resistance ALIDE_RS09130 SM00116 Domain in cystathionine beta-synthase and other proteins. ALIDE_RS09145 SM00267 diguanylate cyclase ALIDE_RS09155 SM00411 bacterial (prokaryotic) histone like domain ALIDE_RS09160 SM00316 Ribosomal protein S1-like RNA-binding domain ALIDE_RS09175 SM00830 Chorismate mutase type II ALIDE_RS09185 SM00434 DNA Topoisomerase IV ALIDE_RS09230 SM00857 Resolvase, N terminal domain ALIDE_RS09245 SM00530 Helix-turn-helix XRE-family like proteins ALIDE_RS09355 SM00829 Enoylreductase ALIDE_RS09435 SM00530 Helix-turn-helix XRE-family like proteins ALIDE_RS09455 SM00363 S4 RNA-binding domain ALIDE_RS09460 SM00387 Histidine kinase-like ATPases ALIDE_RS09460 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS09465 SM00448 cheY-homologous receiver domain ALIDE_RS09465 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS09500 SM00450 Rhodanese Homology Domain ALIDE_RS09515 SM00831 Cation transporter/ATPase, N-terminus ALIDE_RS09530 SM00116 Domain in cystathionine beta-synthase and other proteins. ALIDE_RS09575 SM00316 Ribosomal protein S1-like RNA-binding domain ALIDE_RS09575 SM00357 Cold shock protein domain ALIDE_RS09575 SM00955 ALIDE_RS09575 ALIDE_RS09605 SM00316 Ribosomal protein S1-like RNA-binding domain ALIDE_RS09605 SM00322 K homology RNA-binding domain ALIDE_RS09675 SM00116 Domain in cystathionine beta-synthase and other proteins. ALIDE_RS09675 SM01240 ALIDE_RS09675 ALIDE_RS09720 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS09720 SM00866 ALIDE_RS09720 ALIDE_RS09780 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ALIDE_RS09785 SM01092 CO dehydrogenase flavoprotein C-terminal domain ALIDE_RS09790 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS09860 SM00448 cheY-homologous receiver domain ALIDE_RS09865 SM00387 Histidine kinase-like ATPases ALIDE_RS09865 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS09950 SM00822 ALIDE_RS09950 ALIDE_RS10030 SM00318 Staphylococcal nuclease homologues ALIDE_RS10105 SM00344 helix_turn_helix ASNC type ALIDE_RS10135 SM00411 bacterial (prokaryotic) histone like domain ALIDE_RS10415 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS10415 SM00895 ALIDE_RS10415 ALIDE_RS10440 SM01007 Class II Aldolase and Adducin N-terminal domain ALIDE_RS10475 SM00028 Tetratricopeptide repeats ALIDE_RS10480 SM00840 ALIDE_RS10480 ALIDE_RS10485 SM00478 endonuclease III ALIDE_RS10545 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS10555 SM00479 ALIDE_RS10555 ALIDE_RS10565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ALIDE_RS10625 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS10645 SM01209 ALIDE_RS10645 ALIDE_RS10645 SM01210 ALIDE_RS10645 ALIDE_RS10670 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS10670 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS10715 SM00316 Ribosomal protein S1-like RNA-binding domain ALIDE_RS10720 SM00267 diguanylate cyclase ALIDE_RS10835 SM00091 PAS domain ALIDE_RS10835 SM00387 Histidine kinase-like ATPases ALIDE_RS10835 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS10835 SM00448 cheY-homologous receiver domain ALIDE_RS10845 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS10845 SM00448 cheY-homologous receiver domain ALIDE_RS10850 SM00387 Histidine kinase-like ATPases ALIDE_RS10915 SM00729 Elongator protein 3, MiaB family, Radical SAM ALIDE_RS10925 SM00487 DEAD-like helicases superfamily ALIDE_RS10925 SM00490 helicase superfamily c-terminal domain ALIDE_RS10950 SM00271 DnaJ molecular chaperone homology domain ALIDE_RS10965 SM00479 ALIDE_RS10965 ALIDE_RS11025 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS11025 SM00448 cheY-homologous receiver domain ALIDE_RS11030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS11030 SM00091 PAS domain ALIDE_RS11030 SM00387 Histidine kinase-like ATPases ALIDE_RS11030 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS11140 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS11140 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS11140 SM00091 PAS domain ALIDE_RS11140 SM00267 diguanylate cyclase ALIDE_RS11140 SM01079 ALIDE_RS11140 ALIDE_RS11155 SM00968 SMC proteins Flexible Hinge Domain ALIDE_RS11160 SM00771 ZipA, C-terminal domain (FtsZ-binding) ALIDE_RS11165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ALIDE_RS11165 SM00292 breast cancer carboxy-terminal domain ALIDE_RS11165 SM00532 Ligase N family ALIDE_RS11220 SM00822 ALIDE_RS11220 ALIDE_RS11225 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS11285 SM00954 Region found in RelA / SpoT proteins ALIDE_RS11315 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS11315 SM00895 ALIDE_RS11315 ALIDE_RS11335 SM00530 Helix-turn-helix XRE-family like proteins ALIDE_RS11355 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS11365 SM00729 Elongator protein 3, MiaB family, Radical SAM ALIDE_RS11365 SM00876 Biotin and Thiamin Synthesis associated domain ALIDE_RS11375 SM00448 cheY-homologous receiver domain ALIDE_RS11375 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS11380 SM00387 Histidine kinase-like ATPases ALIDE_RS11380 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS11395 SM00450 Rhodanese Homology Domain ALIDE_RS11430 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ALIDE_RS11460 SM00354 helix_turn _helix lactose operon repressor ALIDE_RS11465 SM00822 ALIDE_RS11465 ALIDE_RS11480 SM01144 ALIDE_RS11480 ALIDE_RS11500 SM00448 cheY-homologous receiver domain ALIDE_RS11500 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS11505 SM00387 Histidine kinase-like ATPases ALIDE_RS11505 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS11520 SM00829 Enoylreductase ALIDE_RS11565 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS11570 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS11605 SM00861 Transketolase, pyrimidine binding domain ALIDE_RS11615 SM00344 helix_turn_helix ASNC type ALIDE_RS11635 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS11660 SM00829 Enoylreductase ALIDE_RS11705 SM00893 Electron transfer flavoprotein domain ALIDE_RS11710 SM00893 Electron transfer flavoprotein domain ALIDE_RS11725 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS11735 SM00460 Transglutaminase/protease-like homologues ALIDE_RS11745 SM00861 Transketolase, pyrimidine binding domain ALIDE_RS11770 SM00822 ALIDE_RS11770 ALIDE_RS11780 SM00861 Transketolase, pyrimidine binding domain ALIDE_RS11815 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS11835 SM00116 Domain in cystathionine beta-synthase and other proteins. ALIDE_RS11870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS11950 SM00861 Transketolase, pyrimidine binding domain ALIDE_RS11985 SM00881 CoA binding domain ALIDE_RS11990 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS12015 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12040 SM00882 Coenzyme A transferase ALIDE_RS12045 SM00882 Coenzyme A transferase ALIDE_RS12050 SM00091 PAS domain ALIDE_RS12050 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS12095 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12100 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12110 SM01130 ALIDE_RS12110 ALIDE_RS12120 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS12120 SM00895 ALIDE_RS12120 ALIDE_RS12125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ALIDE_RS12125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ALIDE_RS12135 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12185 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12185 SM00930 ALIDE_RS12185 ALIDE_RS12195 SM00493 ALIDE_RS12195 ALIDE_RS12205 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12250 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12310 SM00357 Cold shock protein domain ALIDE_RS12310 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12310 SM00959 Rho termination factor, N-terminal domain ALIDE_RS12330 SM00091 PAS domain ALIDE_RS12330 SM00387 Histidine kinase-like ATPases ALIDE_RS12330 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS12335 SM00448 cheY-homologous receiver domain ALIDE_RS12335 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS12345 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12370 SM00855 Phosphoglycerate mutase family ALIDE_RS12385 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS12385 SM00267 diguanylate cyclase ALIDE_RS12400 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12410 SM01103 ALIDE_RS12410 ALIDE_RS12430 SM00851 MGS-like domain ALIDE_RS12430 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ALIDE_RS12435 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ALIDE_RS12445 SM00422 helix_turn_helix, mercury resistance ALIDE_RS12450 SM00411 bacterial (prokaryotic) histone like domain ALIDE_RS12455 SM00873 B3/4 domain ALIDE_RS12455 SM00874 tRNA synthetase B5 domain ALIDE_RS12455 SM00896 Ferredoxin-fold anticodon binding domain ALIDE_RS12480 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ALIDE_RS12500 SM00151 SWI complex, BAF60b domains ALIDE_RS12540 SM00347 helix_turn_helix multiple antibiotic resistance protein ALIDE_RS12615 SM00967 RNA 2'-O ribose methyltransferase substrate binding ALIDE_RS12625 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS12645 SM00749 bacterial OsmY and nodulation domain ALIDE_RS12655 SM00267 diguanylate cyclase ALIDE_RS12730 SM00858 ALIDE_RS12730 ALIDE_RS12740 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ALIDE_RS12745 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS12745 SM00895 ALIDE_RS12745 ALIDE_RS12755 SM01130 ALIDE_RS12755 ALIDE_RS12770 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ALIDE_RS12815 SM00267 diguanylate cyclase ALIDE_RS12820 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ALIDE_RS12825 SM01130 ALIDE_RS12825 ALIDE_RS12850 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS12850 SM00895 ALIDE_RS12850 ALIDE_RS12900 SM00342 helix_turn_helix, arabinose operon control protein ALIDE_RS12900 SM00478 endonuclease III ALIDE_RS12900 SM01009 AlkA N-terminal domain ALIDE_RS12915 SM00240 Forkhead associated domain ALIDE_RS12965 SM01211 ALIDE_RS12965 ALIDE_RS12975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ALIDE_RS13015 SM01329 ALIDE_RS13015 ALIDE_RS13070 SM00870 ALIDE_RS13070 ALIDE_RS13085 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS13085 SM00487 DEAD-like helicases superfamily ALIDE_RS13085 SM00490 helicase superfamily c-terminal domain ALIDE_RS13085 SM00847 Helicase associated domain (HA2) Add an annotation ALIDE_RS13110 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS13170 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ALIDE_RS13210 SM00354 helix_turn _helix lactose operon repressor ALIDE_RS13215 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS13215 SM01086 C-terminal, D2-small domain, of ClpB protein ALIDE_RS13225 SM00481 DNA polymerase alpha chain like domain ALIDE_RS13235 SM00491 ALIDE_RS13235 ALIDE_RS13240 SM00331 Sigma factor PP2C-like phosphatases ALIDE_RS13240 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ALIDE_RS13265 SM00861 Transketolase, pyrimidine binding domain ALIDE_RS13300 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS13360 SM00244 prohibitin homologues ALIDE_RS13395 SM00831 Cation transporter/ATPase, N-terminus ALIDE_RS13480 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ALIDE_RS13480 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ALIDE_RS13480 SM00493 ALIDE_RS13480 ALIDE_RS13615 SM00448 cheY-homologous receiver domain ALIDE_RS13615 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS13620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS13620 SM00387 Histidine kinase-like ATPases ALIDE_RS13620 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS13670 SM00530 Helix-turn-helix XRE-family like proteins ALIDE_RS13675 SM00411 bacterial (prokaryotic) histone like domain ALIDE_RS13695 SM01329 ALIDE_RS13695 ALIDE_RS13715 SM00858 ALIDE_RS13715 ALIDE_RS13760 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS13770 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS13770 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ALIDE_RS13775 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS13790 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS13790 SM00866 ALIDE_RS13790 ALIDE_RS13800 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS13800 SM00866 ALIDE_RS13800 ALIDE_RS13805 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS13865 SM00841 Elongation factor P, C-terminal ALIDE_RS13865 SM01185 ALIDE_RS13865 ALIDE_RS13920 SM01060 ALIDE_RS13920 ALIDE_RS14060 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14115 SM00822 ALIDE_RS14115 ALIDE_RS14145 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14175 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS14175 SM01027 Beta-Casp domain ALIDE_RS14260 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS14260 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS14335 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS14370 SM00411 bacterial (prokaryotic) histone like domain ALIDE_RS14380 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ALIDE_RS14380 SM00465 GIY-YIG type nucleases (URI domain) ALIDE_RS14405 SM00528 Domain in histone-like proteins of HNS family ALIDE_RS14410 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS14435 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14440 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14505 SM00829 Enoylreductase ALIDE_RS14525 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14530 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14555 SM00893 Electron transfer flavoprotein domain ALIDE_RS14560 SM00893 Electron transfer flavoprotein domain ALIDE_RS14585 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS14600 SM00822 ALIDE_RS14600 ALIDE_RS14620 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS14625 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS14675 SM00822 ALIDE_RS14675 ALIDE_RS14760 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14765 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14845 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14845 SM00464 Found in ATP-dependent protease La (LON) ALIDE_RS14850 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14850 SM00994 ClpX C4-type zinc finger ALIDE_RS14850 SM01086 C-terminal, D2-small domain, of ClpB protein ALIDE_RS14890 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS14890 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS14960 SM00448 cheY-homologous receiver domain ALIDE_RS14960 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS14965 SM00387 Histidine kinase-like ATPases ALIDE_RS14965 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS14995 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS14995 SM00448 cheY-homologous receiver domain ALIDE_RS15000 SM00387 Histidine kinase-like ATPases ALIDE_RS15000 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS15010 SM01230 ALIDE_RS15010 ALIDE_RS15015 SM00852 Probable molybdopterin binding domain ALIDE_RS15075 SM00788 Adenylosuccinate synthetase ALIDE_RS15090 SM00244 prohibitin homologues ALIDE_RS15095 SM00244 prohibitin homologues ALIDE_RS15115 SM00564 beta-propeller repeat ALIDE_RS15140 SM00028 Tetratricopeptide repeats ALIDE_RS15150 SM00562 ALIDE_RS15150 ALIDE_RS15155 SM00363 S4 RNA-binding domain ALIDE_RS15165 SM00363 S4 RNA-binding domain ALIDE_RS15170 SM00257 Lysin motif ALIDE_RS15185 SM00267 diguanylate cyclase ALIDE_RS15230 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ALIDE_RS15230 SM00534 ATPase domain of DNA mismatch repair MUTS family ALIDE_RS15280 SM00448 cheY-homologous receiver domain ALIDE_RS15280 SM00850 LytTr DNA-binding domain ALIDE_RS15305 SM00528 Domain in histone-like proteins of HNS family ALIDE_RS15335 SM00900 ALIDE_RS15335 ALIDE_RS15340 SM00710 Parallel beta-helix repeats ALIDE_RS15340 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses ALIDE_RS15345 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS15365 SM00487 DEAD-like helicases superfamily ALIDE_RS15365 SM00490 helicase superfamily c-terminal domain ALIDE_RS15430 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS15455 SM01329 ALIDE_RS15455 ALIDE_RS15465 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS15465 SM00895 ALIDE_RS15465 ALIDE_RS15500 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS15510 SM00919 Malic enzyme, NAD binding domain ALIDE_RS15510 SM01274 ALIDE_RS15510 ALIDE_RS15515 SM00867 YceI-like domain ALIDE_RS15520 SM00867 YceI-like domain ALIDE_RS15540 SM00670 Large family of predicted nucleotide-binding domains ALIDE_RS15550 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS15585 SM00271 DnaJ molecular chaperone homology domain ALIDE_RS15635 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS15635 SM01027 Beta-Casp domain ALIDE_RS15660 SM01329 ALIDE_RS15660 ALIDE_RS15665 SM00859 Semialdehyde dehydrogenase, NAD binding domain ALIDE_RS15705 SM00464 Found in ATP-dependent protease La (LON) ALIDE_RS15775 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS15780 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS15815 SM00358 Double-stranded RNA binding motif ALIDE_RS15815 SM00535 Ribonuclease III family ALIDE_RS15830 SM00838 Elongation factor G C-terminus ALIDE_RS15835 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ALIDE_RS15860 SM00825 Beta-ketoacyl synthase ALIDE_RS15865 SM00823 Phosphopantetheine attachment site ALIDE_RS15870 SM00822 ALIDE_RS15870 ALIDE_RS15875 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ALIDE_RS15925 SM00363 S4 RNA-binding domain ALIDE_RS15930 SM00316 Ribosomal protein S1-like RNA-binding domain ALIDE_RS15940 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ALIDE_RS15950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS15950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS15995 SM00267 diguanylate cyclase ALIDE_RS15995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS16025 SM00881 CoA binding domain ALIDE_RS16035 SM00870 ALIDE_RS16035 ALIDE_RS16055 SM01359 ALIDE_RS16055 ALIDE_RS16055 SM01360 ALIDE_RS16055 ALIDE_RS16090 SM00763 PrkA AAA domain ALIDE_RS16135 SM00871 Bacterial transcription activator, effector binding domain ALIDE_RS16155 SM00478 endonuclease III ALIDE_RS16155 SM00525 ALIDE_RS16155 ALIDE_RS16160 SM00506 Appr-1"-p processing enzyme ALIDE_RS16220 SM00155 Phospholipase D. Active site motifs. ALIDE_RS16250 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS16250 SM01086 C-terminal, D2-small domain, of ClpB protein ALIDE_RS16270 SM01130 ALIDE_RS16270 ALIDE_RS16280 SM00852 Probable molybdopterin binding domain ALIDE_RS16345 SM00893 Electron transfer flavoprotein domain ALIDE_RS16350 SM00893 Electron transfer flavoprotein domain ALIDE_RS16385 SM00881 CoA binding domain ALIDE_RS16415 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS16445 SM00822 ALIDE_RS16445 ALIDE_RS16495 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS16535 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS16535 SM00091 PAS domain ALIDE_RS16535 SM00267 diguanylate cyclase ALIDE_RS16540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ALIDE_RS16550 SM00729 Elongator protein 3, MiaB family, Radical SAM ALIDE_RS16555 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS16555 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS16630 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS16630 SM00895 ALIDE_RS16630 ALIDE_RS16670 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS16690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS16690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS16695 SM00481 DNA polymerase alpha chain like domain ALIDE_RS16705 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS16720 SM00448 cheY-homologous receiver domain ALIDE_RS16720 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS16725 SM00257 Lysin motif ALIDE_RS16730 SM00387 Histidine kinase-like ATPases ALIDE_RS16730 SM01080 ALIDE_RS16730 ALIDE_RS16760 SM00116 Domain in cystathionine beta-synthase and other proteins. ALIDE_RS16765 SM00116 Domain in cystathionine beta-synthase and other proteins. ALIDE_RS16765 SM01091 Transporter associated domain ALIDE_RS16790 SM00463 Small MutS-related domain ALIDE_RS16815 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS16815 SM00866 ALIDE_RS16815 ALIDE_RS16870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS16900 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ALIDE_RS16905 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ALIDE_RS16920 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS16920 SM00866 ALIDE_RS16920 ALIDE_RS16965 SM00450 Rhodanese Homology Domain ALIDE_RS16990 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS17010 SM00342 helix_turn_helix, arabinose operon control protein ALIDE_RS17050 SM00342 helix_turn_helix, arabinose operon control protein ALIDE_RS17135 SM00450 Rhodanese Homology Domain ALIDE_RS17140 SM00855 Phosphoglycerate mutase family ALIDE_RS17145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ALIDE_RS17145 SM00245 tail specific protease ALIDE_RS17155 SM00448 cheY-homologous receiver domain ALIDE_RS17160 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS17160 SM00448 cheY-homologous receiver domain ALIDE_RS17165 SM00387 Histidine kinase-like ATPases ALIDE_RS17180 SM00749 bacterial OsmY and nodulation domain ALIDE_RS17205 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS17205 SM00962 SRP54-type protein, GTPase domain ALIDE_RS17205 SM00963 SRP54-type protein, helical bundle domain ALIDE_RS17215 SM01130 ALIDE_RS17215 ALIDE_RS17230 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ALIDE_RS17255 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS17255 SM00895 ALIDE_RS17255 ALIDE_RS17260 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS17270 SM00829 Enoylreductase ALIDE_RS17285 SM00448 cheY-homologous receiver domain ALIDE_RS17285 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS17290 SM00387 Histidine kinase-like ATPases ALIDE_RS17290 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS17435 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS17435 SM00866 ALIDE_RS17435 ALIDE_RS17510 SM00882 Coenzyme A transferase ALIDE_RS17515 SM00882 Coenzyme A transferase ALIDE_RS17520 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS17540 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS17555 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS17555 SM00866 ALIDE_RS17555 ALIDE_RS17955 SM00155 Phospholipase D. Active site motifs. ALIDE_RS17960 SM00387 Histidine kinase-like ATPases ALIDE_RS17960 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS17965 SM00448 cheY-homologous receiver domain ALIDE_RS17965 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS17970 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ALIDE_RS17985 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS17990 SM00563 Phosphate acyltransferases ALIDE_RS18010 SM00732 Likely ribonuclease with RNase H fold. ALIDE_RS18020 SM00073 Histidine Phosphotransfer domain ALIDE_RS18020 SM00260 Two component signalling adaptor domain ALIDE_RS18020 SM00387 Histidine kinase-like ATPases ALIDE_RS18020 SM00448 cheY-homologous receiver domain ALIDE_RS18020 SM01231 ALIDE_RS18020 ALIDE_RS18025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS18030 SM00260 Two component signalling adaptor domain ALIDE_RS18035 SM00448 cheY-homologous receiver domain ALIDE_RS18040 SM00448 cheY-homologous receiver domain ALIDE_RS18055 SM00798 AICARFT/IMPCHase bienzyme ALIDE_RS18055 SM00851 MGS-like domain ALIDE_RS18100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS18100 SM00387 Histidine kinase-like ATPases ALIDE_RS18100 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS18105 SM00448 cheY-homologous receiver domain ALIDE_RS18105 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS18145 SM00729 Elongator protein 3, MiaB family, Radical SAM ALIDE_RS18150 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS18150 SM00962 SRP54-type protein, GTPase domain ALIDE_RS18150 SM00963 SRP54-type protein, helical bundle domain ALIDE_RS18165 SM00387 Histidine kinase-like ATPases ALIDE_RS18165 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS18170 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS18170 SM00448 cheY-homologous receiver domain ALIDE_RS18175 SM00644 ALIDE_RS18175 ALIDE_RS18210 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS18280 SM00955 ALIDE_RS18280 ALIDE_RS18340 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS18355 SM00822 ALIDE_RS18355 ALIDE_RS18375 SM00864 Tubulin/FtsZ family, GTPase domain ALIDE_RS18375 SM00865 Tubulin/FtsZ family, C-terminal domain ALIDE_RS18380 SM00842 Cell division protein FtsA ALIDE_RS18450 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS18450 SM01086 C-terminal, D2-small domain, of ClpB protein ALIDE_RS18470 SM00833 Cobalamin synthesis protein cobW C-terminal domain ALIDE_RS18485 SM00448 cheY-homologous receiver domain ALIDE_RS18490 SM00448 cheY-homologous receiver domain ALIDE_RS18500 SM00448 cheY-homologous receiver domain ALIDE_RS18505 SM00448 cheY-homologous receiver domain ALIDE_RS18510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ALIDE_RS18515 SM00091 PAS domain ALIDE_RS18515 SM00387 Histidine kinase-like ATPases ALIDE_RS18515 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS18520 SM00387 Histidine kinase-like ATPases ALIDE_RS18520 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS18525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS18525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS18545 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS18550 SM00363 S4 RNA-binding domain ALIDE_RS18610 SM00347 helix_turn_helix multiple antibiotic resistance protein ALIDE_RS18615 SM00822 ALIDE_RS18615 ALIDE_RS18635 SM00893 Electron transfer flavoprotein domain ALIDE_RS18640 SM00893 Electron transfer flavoprotein domain ALIDE_RS18780 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS18810 SM00479 ALIDE_RS18810 ALIDE_RS18815 SM00116 Domain in cystathionine beta-synthase and other proteins. ALIDE_RS18845 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS18870 SM00342 helix_turn_helix, arabinose operon control protein ALIDE_RS18895 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS18900 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS18915 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS18930 SM00267 diguanylate cyclase ALIDE_RS18945 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS18945 SM00267 diguanylate cyclase ALIDE_RS19020 SM00947 Carbonic anhydrase ALIDE_RS19030 SM00422 helix_turn_helix, mercury resistance ALIDE_RS19060 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS19065 SM00448 cheY-homologous receiver domain ALIDE_RS19075 SM00138 Methyltransferase, chemotaxis proteins ALIDE_RS19080 SM00260 Two component signalling adaptor domain ALIDE_RS19085 SM00073 Histidine Phosphotransfer domain ALIDE_RS19085 SM00260 Two component signalling adaptor domain ALIDE_RS19085 SM00387 Histidine kinase-like ATPases ALIDE_RS19085 SM01231 ALIDE_RS19085 ALIDE_RS19090 SM00448 cheY-homologous receiver domain ALIDE_RS19100 SM00387 Histidine kinase-like ATPases ALIDE_RS19100 SM00448 cheY-homologous receiver domain ALIDE_RS19105 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS19105 SM00448 cheY-homologous receiver domain ALIDE_RS19155 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS19220 SM00448 cheY-homologous receiver domain ALIDE_RS19240 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS19240 SM00962 SRP54-type protein, GTPase domain ALIDE_RS19265 SM00858 ALIDE_RS19265 ALIDE_RS19310 SM00047 Lysozyme subfamily 2 ALIDE_RS19335 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS19380 SM00855 Phosphoglycerate mutase family ALIDE_RS19385 SM00267 diguanylate cyclase ALIDE_RS19440 SM00487 DEAD-like helicases superfamily ALIDE_RS19440 SM00490 helicase superfamily c-terminal domain ALIDE_RS19470 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS19490 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS19550 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS19550 SM00895 ALIDE_RS19550 ALIDE_RS19575 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS19575 SM00091 PAS domain ALIDE_RS19600 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS19600 SM00895 ALIDE_RS19600 ALIDE_RS19605 SM00563 Phosphate acyltransferases ALIDE_RS19610 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS19650 SM00897 FIST N domain ALIDE_RS19650 SM01204 ALIDE_RS19650 ALIDE_RS19660 SM00411 bacterial (prokaryotic) histone like domain ALIDE_RS19680 SM00662 RNA polymerases D ALIDE_RS19685 SM00363 S4 RNA-binding domain ALIDE_RS19685 SM01390 ALIDE_RS19685 ALIDE_RS19750 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ALIDE_RS19755 SM01374 ALIDE_RS19755 ALIDE_RS19765 SM00419 helix_turn_helix, cAMP Regulatory protein ALIDE_RS19765 SM00420 helix_turn_helix, Deoxyribose operon repressor ALIDE_RS19765 SM01134 ALIDE_RS19765 ALIDE_RS19800 SM00487 DEAD-like helicases superfamily ALIDE_RS19800 SM00490 helicase superfamily c-terminal domain ALIDE_RS19805 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ALIDE_RS19835 SM00986 Uracil DNA glycosylase superfamily ALIDE_RS19835 SM00987 UreE urease accessory protein, C-terminal domain ALIDE_RS19905 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ALIDE_RS19905 SM00493 ALIDE_RS19905 ALIDE_RS19910 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS19940 SM00487 DEAD-like helicases superfamily ALIDE_RS20065 SM00953 ALIDE_RS20065 ALIDE_RS20105 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS20120 SM00953 ALIDE_RS20120 ALIDE_RS20130 SM00830 Chorismate mutase type II ALIDE_RS20140 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS20140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS20145 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS20145 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS20145 SM00091 PAS domain ALIDE_RS20145 SM00267 diguanylate cyclase ALIDE_RS20145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS20210 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS20240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS20240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS20245 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS20245 SM00267 diguanylate cyclase ALIDE_RS20245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS20250 SM00448 cheY-homologous receiver domain ALIDE_RS20250 SM01012 ALIDE_RS20250 ALIDE_RS20270 SM00981 ALIDE_RS20270 ALIDE_RS20275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS20275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS20290 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS20310 SM00836 DALR anticodon binding domain ALIDE_RS20310 SM01016 Arginyl tRNA synthetase N terminal dom ALIDE_RS20330 SM00387 Histidine kinase-like ATPases ALIDE_RS20330 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS20330 SM00448 cheY-homologous receiver domain ALIDE_RS20335 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS20335 SM00448 cheY-homologous receiver domain ALIDE_RS20435 SM00235 Zinc-dependent metalloprotease ALIDE_RS20475 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS20485 SM00052 Putative diguanylate phosphodiesterase ALIDE_RS20485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ALIDE_RS20485 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS20485 SM00091 PAS domain ALIDE_RS20485 SM00267 diguanylate cyclase ALIDE_RS20540 SM01001 AIR carboxylase ALIDE_RS20595 SM01126 ALIDE_RS20595 ALIDE_RS20675 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ALIDE_RS20675 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ALIDE_RS20695 SM01011 Aminopeptidase P, N-terminal domain ALIDE_RS20740 SM00861 Transketolase, pyrimidine binding domain ALIDE_RS20745 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALIDE_RS20825 SM00871 Bacterial transcription activator, effector binding domain ALIDE_RS20840 SM01144 ALIDE_RS20840 ALIDE_RS20845 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS20865 SM00881 CoA binding domain ALIDE_RS20885 SM00151 SWI complex, BAF60b domains ALIDE_RS20885 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ALIDE_RS20885 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ALIDE_RS20885 SM00493 ALIDE_RS20885 ALIDE_RS20890 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ALIDE_RS20905 SM00829 Enoylreductase ALIDE_RS20930 SM00347 helix_turn_helix multiple antibiotic resistance protein ALIDE_RS20940 SM00953 ALIDE_RS20940 ALIDE_RS20955 SM00387 Histidine kinase-like ATPases ALIDE_RS20955 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS20960 SM00448 cheY-homologous receiver domain ALIDE_RS20960 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS20975 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS20985 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS20985 SM00895 ALIDE_RS20985 ALIDE_RS21010 SM01005 Alanine racemase, C-terminal domain ALIDE_RS21020 SM00344 helix_turn_helix ASNC type ALIDE_RS21030 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS21055 SM01323 ALIDE_RS21055 ALIDE_RS21065 SM00344 helix_turn_helix ASNC type ALIDE_RS21075 SM00925 MltA specific insert domain ALIDE_RS21085 SM00421 helix_turn_helix, Lux Regulon ALIDE_RS21085 SM00448 cheY-homologous receiver domain ALIDE_RS21090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS21090 SM00091 PAS domain ALIDE_RS21090 SM00387 Histidine kinase-like ATPases ALIDE_RS21090 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS21130 SM01322 ALIDE_RS21130 ALIDE_RS21190 SM00849 Metallo-beta-lactamase superfamily ALIDE_RS21195 SM00240 Forkhead associated domain ALIDE_RS21200 SM00331 Sigma factor PP2C-like phosphatases ALIDE_RS21200 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ALIDE_RS21210 SM00881 CoA binding domain ALIDE_RS21220 SM00859 Semialdehyde dehydrogenase, NAD binding domain ALIDE_RS21230 SM00257 Lysin motif ALIDE_RS21280 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ALIDE_RS21300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ALIDE_RS21300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ALIDE_RS21320 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS21345 SM00822 ALIDE_RS21345 ALIDE_RS21420 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS21435 SM00881 CoA binding domain ALIDE_RS21440 SM00878 Biotin carboxylase C-terminal domain ALIDE_RS21475 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS21510 SM00387 Histidine kinase-like ATPases ALIDE_RS21515 SM00448 cheY-homologous receiver domain ALIDE_RS21515 SM00862 Transcriptional regulatory protein, C terminal ALIDE_RS21570 SM00831 Cation transporter/ATPase, N-terminus ALIDE_RS21595 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS21605 SM00829 Enoylreductase ALIDE_RS21620 SM00346 helix_turn_helix isocitrate lyase regulation ALIDE_RS21700 SM00267 diguanylate cyclase ALIDE_RS21705 SM00345 helix_turn_helix gluconate operon transcriptional repressor ALIDE_RS21705 SM00895 ALIDE_RS21705 ALIDE_RS21725 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS21730 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS21745 SM00919 Malic enzyme, NAD binding domain ALIDE_RS21745 SM01274 ALIDE_RS21745 ALIDE_RS21760 SM00650 Ribosomal RNA adenine dimethylases ALIDE_RS21805 SM00267 diguanylate cyclase ALIDE_RS21835 SM00360 RNA recognition motif ALIDE_RS21840 SM00360 RNA recognition motif ALIDE_RS21845 SM00822 ALIDE_RS21845 ALIDE_RS21860 SM00116 Domain in cystathionine beta-synthase and other proteins. ALIDE_RS21880 SM00100 Cyclic nucleotide-monophosphate binding domain ALIDE_RS21890 SM00062 Bacterial periplasmic substrate-binding proteins ALIDE_RS21935 SM00382 ATPases associated with a variety of cellular activities ALIDE_RS21970 SM01234 ALIDE_RS21970 ALIDE_RS22750 SM00422 helix_turn_helix, mercury resistance ALIDE_RS23090 SM00470 ParB-like nuclease domain ALIDE_RS23140 SM00091 PAS domain ALIDE_RS23140 SM00387 Histidine kinase-like ATPases ALIDE_RS23140 SM00388 His Kinase A (phosphoacceptor) domain ALIDE_RS23165 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ALIDE_RS23165 SM00091 PAS domain ALIDE_RS23165 SM00388 His Kinase A (phosphoacceptor) domain