locus-tag class description ALIDE2_RS00015 PF08299 Bacterial dnaA protein helix-turn-helix ALIDE2_RS00015 PF11638 DnaA N-terminal domain ALIDE2_RS00015 PF00308 Bacterial dnaA protein ALIDE2_RS00020 PF00712 DNA polymerase III beta subunit, N-terminal domain ALIDE2_RS00020 PF02768 DNA polymerase III beta subunit, C-terminal domain ALIDE2_RS00020 PF02767 DNA polymerase III beta subunit, central domain ALIDE2_RS00025 PF01751 Toprim domain ALIDE2_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus ALIDE2_RS00025 PF00204 DNA gyrase B ALIDE2_RS00025 PF18053 DNA gyrase B subunit insert domain ALIDE2_RS00045 PF00665 Integrase core domain ALIDE2_RS00045 PF13276 HTH-like domain ALIDE2_RS00045 PF13333 Integrase core domain ALIDE2_RS00050 PF01527 Transposase ALIDE2_RS00065 PF02515 CoA-transferase family III ALIDE2_RS00070 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS00075 PF03466 LysR substrate binding domain ALIDE2_RS00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00080 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00090 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS00090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS00090 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS00095 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00095 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00095 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00100 PF01039 Carboxyl transferase domain ALIDE2_RS00105 PF00708 Acylphosphatase ALIDE2_RS00115 PF01842 ACT domain ALIDE2_RS00115 PF00742 Homoserine dehydrogenase ALIDE2_RS00115 PF03447 Homoserine dehydrogenase, NAD binding domain ALIDE2_RS00120 PF13307 Helicase C-terminal domain ALIDE2_RS00120 PF06733 DEAD_2 ALIDE2_RS00130 PF00877 NlpC/P60 family ALIDE2_RS00135 PF00793 DAHP synthetase I family ALIDE2_RS00140 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS00140 PF00563 EAL domain ALIDE2_RS00140 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS00150 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00155 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00160 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00165 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00170 PF13380 CoA binding domain ALIDE2_RS00170 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE2_RS00175 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS00195 PF04381 Putative exonuclease, RdgC ALIDE2_RS00200 PF07670 Nucleoside recognition ALIDE2_RS00215 PF09278 MerR, DNA binding ALIDE2_RS00215 PF00376 MerR family regulatory protein ALIDE2_RS00225 PF00403 Heavy-metal-associated domain ALIDE2_RS00230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS00230 PF02203 Tar ligand binding domain homologue ALIDE2_RS00230 PF00672 HAMP domain ALIDE2_RS00235 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS00240 PF00529 HlyD membrane-fusion protein of T1SS ALIDE2_RS00240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS00250 PF00072 Response regulator receiver domain ALIDE2_RS00250 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS00255 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS00255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS00260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ALIDE2_RS00265 PF00043 Glutathione S-transferase, C-terminal domain ALIDE2_RS00265 PF02798 Glutathione S-transferase, N-terminal domain ALIDE2_RS00270 PF03692 Putative zinc- or iron-chelating domain ALIDE2_RS00275 PF03358 NADPH-dependent FMN reductase ALIDE2_RS00280 PF01134 Glucose inhibited division protein A ALIDE2_RS00280 PF13932 GidA associated domain ALIDE2_RS00290 PF02527 rRNA small subunit methyltransferase G ALIDE2_RS00295 PF01810 LysE type translocator ALIDE2_RS00300 PF13614 AAA domain ALIDE2_RS00310 PF02195 ParB-like nuclease domain ALIDE2_RS00310 PF17762 HTH domain found in ParB protein ALIDE2_RS00335 PF05552 Conserved TM helix ALIDE2_RS00335 PF00924 Mechanosensitive ion channel ALIDE2_RS00340 PF01565 FAD binding domain ALIDE2_RS00340 PF02913 FAD linked oxidases, C-terminal domain ALIDE2_RS00350 PF01923 Cobalamin adenosyltransferase ALIDE2_RS00355 PF03061 Thioesterase superfamily ALIDE2_RS00360 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ALIDE2_RS00360 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ALIDE2_RS00370 PF03466 LysR substrate binding domain ALIDE2_RS00370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00375 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00385 PF00106 short chain dehydrogenase ALIDE2_RS00395 PF00860 Permease family ALIDE2_RS00405 PF01494 FAD binding domain ALIDE2_RS00410 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS00410 PF00501 AMP-binding enzyme ALIDE2_RS00415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00415 PF03466 LysR substrate binding domain ALIDE2_RS00420 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00425 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00430 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00430 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00430 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00435 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS00440 PF01066 CDP-alcohol phosphatidyltransferase ALIDE2_RS00460 PF05209 Septum formation inhibitor MinC, N-terminal domain ALIDE2_RS00460 PF03775 Septum formation inhibitor MinC, C-terminal domain ALIDE2_RS00465 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS00470 PF03776 Septum formation topological specificity factor MinE ALIDE2_RS00475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00475 PF03466 LysR substrate binding domain ALIDE2_RS00480 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00485 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ALIDE2_RS00485 PF13378 Enolase C-terminal domain-like ALIDE2_RS00490 PF01613 Flavin reductase like domain ALIDE2_RS00495 PF00561 alpha/beta hydrolase fold ALIDE2_RS00515 PF03466 LysR substrate binding domain ALIDE2_RS00515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00525 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain ALIDE2_RS00525 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain ALIDE2_RS00530 PF13291 ACT domain ALIDE2_RS00530 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS00535 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00535 PF18158 Adaptive response protein AidB N-terminal domain ALIDE2_RS00535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00540 PF00690 Cation transporter/ATPase, N-terminus ALIDE2_RS00540 PF00689 Cation transporting ATPase, C-terminus ALIDE2_RS00545 PF02965 Vitamin B12 dependent methionine synthase, activation domain ALIDE2_RS00545 PF00809 Pterin binding enzyme ALIDE2_RS00545 PF02574 Homocysteine S-methyltransferase ALIDE2_RS00545 PF02607 B12 binding domain ALIDE2_RS00545 PF02310 B12 binding domain ALIDE2_RS00550 PF03466 LysR substrate binding domain ALIDE2_RS00550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00555 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00565 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00570 PF00270 DEAD/DEAH box helicase ALIDE2_RS00570 PF00570 HRDC domain ALIDE2_RS00570 PF09382 RQC domain ALIDE2_RS00570 PF00271 Helicase conserved C-terminal domain ALIDE2_RS00570 PF16124 RecQ zinc-binding ALIDE2_RS00590 PF00563 EAL domain ALIDE2_RS00590 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS00590 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS00600 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE2_RS00605 PF00158 Sigma-54 interaction domain ALIDE2_RS00605 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS00615 PF03315 Serine dehydratase beta chain ALIDE2_RS00615 PF03313 Serine dehydratase alpha chain ALIDE2_RS00620 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00625 PF00501 AMP-binding enzyme ALIDE2_RS00625 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS00630 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00640 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00645 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00650 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00655 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS00655 PF00501 AMP-binding enzyme ALIDE2_RS00660 PF02803 Thiolase, C-terminal domain ALIDE2_RS00660 PF00108 Thiolase, N-terminal domain ALIDE2_RS00665 PF00106 short chain dehydrogenase ALIDE2_RS00670 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00680 PF09339 IclR helix-turn-helix domain ALIDE2_RS00685 PF02515 CoA-transferase family III ALIDE2_RS00695 PF00108 Thiolase, N-terminal domain ALIDE2_RS00695 PF02803 Thiolase, C-terminal domain ALIDE2_RS00700 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00700 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00700 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00705 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS00705 PF00501 AMP-binding enzyme ALIDE2_RS00710 PF01575 MaoC like domain ALIDE2_RS00715 PF00106 short chain dehydrogenase ALIDE2_RS00720 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00740 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00750 PF02515 CoA-transferase family III ALIDE2_RS00755 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00765 PF00106 short chain dehydrogenase ALIDE2_RS00770 PF01575 MaoC like domain ALIDE2_RS00775 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS00780 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ALIDE2_RS00780 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ALIDE2_RS00785 PF00108 Thiolase, N-terminal domain ALIDE2_RS00785 PF02803 Thiolase, C-terminal domain ALIDE2_RS00795 PF02515 CoA-transferase family III ALIDE2_RS00805 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00810 PF03466 LysR substrate binding domain ALIDE2_RS00815 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00820 PF07687 Peptidase dimerisation domain ALIDE2_RS00820 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS00825 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00830 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS00830 PF00501 AMP-binding enzyme ALIDE2_RS00835 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00840 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00845 PF07687 Peptidase dimerisation domain ALIDE2_RS00845 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS00860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00860 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00875 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00885 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00890 PF01039 Carboxyl transferase domain ALIDE2_RS00895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS00895 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS00895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS00900 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS00905 PF00364 Biotin-requiring enzyme ALIDE2_RS00905 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS00905 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS00905 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS00915 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00920 PF02515 CoA-transferase family III ALIDE2_RS00925 PF03466 LysR substrate binding domain ALIDE2_RS00925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00930 PF02515 CoA-transferase family III ALIDE2_RS00935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS00935 PF03466 LysR substrate binding domain ALIDE2_RS00940 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS00945 PF02515 CoA-transferase family III ALIDE2_RS00950 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALIDE2_RS00950 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALIDE2_RS00960 PF06977 SdiA-regulated ALIDE2_RS00965 PF02607 B12 binding domain ALIDE2_RS00965 PF02310 B12 binding domain ALIDE2_RS00965 PF02965 Vitamin B12 dependent methionine synthase, activation domain ALIDE2_RS00965 PF00809 Pterin binding enzyme ALIDE2_RS00965 PF02574 Homocysteine S-methyltransferase ALIDE2_RS00970 PF18470 Cas9 alpha-helical lobe domain ALIDE2_RS00970 PF13395 HNH endonuclease ALIDE2_RS00970 PF18541 RuvC endonuclease subdomain 3 ALIDE2_RS00980 PF09827 CRISPR associated protein Cas2 ALIDE2_RS00985 PF13007 Transposase C of IS166 homeodomain ALIDE2_RS00985 PF03050 Transposase IS66 family ALIDE2_RS00985 PF13817 IS66 C-terminal element ALIDE2_RS00985 PF13005 zinc-finger binding domain of transposase IS66 ALIDE2_RS01000 PF00665 Integrase core domain ALIDE2_RS01005 PF01695 IstB-like ATP binding protein ALIDE2_RS01010 PF01202 Shikimate kinase ALIDE2_RS01025 PF00175 Oxidoreductase NAD-binding domain ALIDE2_RS01025 PF00970 Oxidoreductase FAD-binding domain ALIDE2_RS01030 PF13458 Periplasmic binding protein ALIDE2_RS01035 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS01040 PF00005 ABC transporter ALIDE2_RS01050 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS01050 PF00593 TonB dependent receptor ALIDE2_RS01050 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS01050 PF00593 TonB dependent receptor ALIDE2_RS01060 PF13335 Magnesium chelatase, subunit ChlI C-terminal ALIDE2_RS01060 PF01078 Magnesium chelatase, subunit ChlI ALIDE2_RS01070 PF00543 Nitrogen regulatory protein P-II ALIDE2_RS01075 PF00909 Ammonium Transporter Family ALIDE2_RS01080 PF01527 Transposase ALIDE2_RS01090 PF00665 Integrase core domain ALIDE2_RS01095 PF01695 IstB-like ATP binding protein ALIDE2_RS01105 PF12697 Alpha/beta hydrolase family ALIDE2_RS01115 PF05145 Transition state regulatory protein AbrB ALIDE2_RS01125 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS01125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS01125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS01130 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01135 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE2_RS01135 PF13380 CoA binding domain ALIDE2_RS01140 PF01565 FAD binding domain ALIDE2_RS01150 PF02754 Cysteine-rich domain ALIDE2_RS01150 PF13183 4Fe-4S dicluster domain ALIDE2_RS01165 PF07690 Major Facilitator Superfamily ALIDE2_RS01170 PF00842 Alanine racemase, C-terminal domain ALIDE2_RS01170 PF01168 Alanine racemase, N-terminal domain ALIDE2_RS01175 PF03150 Di-haem cytochrome c peroxidase ALIDE2_RS01175 PF00034 Cytochrome c ALIDE2_RS01180 PF14497 Glutathione S-transferase, C-terminal domain ALIDE2_RS01180 PF02798 Glutathione S-transferase, N-terminal domain ALIDE2_RS01185 PF18073 Rubredoxin metal binding domain ALIDE2_RS01195 PF01425 Amidase ALIDE2_RS01205 PF01063 Amino-transferase class IV ALIDE2_RS01225 PF00535 Glycosyl transferase family 2 ALIDE2_RS01235 PF03060 Nitronate monooxygenase ALIDE2_RS01240 PF03466 LysR substrate binding domain ALIDE2_RS01240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS01245 PF06779 Uncharacterised MFS-type transporter YbfB ALIDE2_RS01250 PF03475 3-alpha domain ALIDE2_RS01250 PF03473 MOSC domain ALIDE2_RS01270 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01275 PF03466 LysR substrate binding domain ALIDE2_RS01275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS01280 PF02515 CoA-transferase family III ALIDE2_RS01285 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS01285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS01285 PF00672 HAMP domain ALIDE2_RS01290 PF00072 Response regulator receiver domain ALIDE2_RS01290 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS01295 PF07690 Major Facilitator Superfamily ALIDE2_RS01310 PF01435 Peptidase family M48 ALIDE2_RS01330 PF00158 Sigma-54 interaction domain ALIDE2_RS01330 PF02830 V4R domain ALIDE2_RS01330 PF06505 Activator of aromatic catabolism ALIDE2_RS01330 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS01335 PF06099 Phenol hydroxylase subunit ALIDE2_RS01340 PF02332 Methane/Phenol/Toluene Hydroxylase ALIDE2_RS01345 PF02406 MmoB/DmpM family ALIDE2_RS01350 PF04945 YHS domain ALIDE2_RS01350 PF02332 Methane/Phenol/Toluene Hydroxylase ALIDE2_RS01355 PF01494 FAD binding domain ALIDE2_RS01360 PF00970 Oxidoreductase FAD-binding domain ALIDE2_RS01360 PF00175 Oxidoreductase NAD-binding domain ALIDE2_RS01360 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS01365 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS01370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE2_RS01375 PF03928 Haem-degrading ALIDE2_RS01385 PF00171 Aldehyde dehydrogenase family ALIDE2_RS01390 PF00561 alpha/beta hydrolase fold ALIDE2_RS01400 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation ALIDE2_RS01400 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALIDE2_RS01405 PF07836 DmpG-like communication domain ALIDE2_RS01405 PF00682 HMGL-like ALIDE2_RS01415 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01420 PF01361 Tautomerase enzyme ALIDE2_RS01425 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS01430 PF09339 IclR helix-turn-helix domain ALIDE2_RS01430 PF01614 Bacterial transcriptional regulator ALIDE2_RS01435 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01440 PF04909 Amidohydrolase ALIDE2_RS01445 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01450 PF03737 Aldolase/RraA ALIDE2_RS01455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS01455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS01460 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01465 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01470 PF04909 Amidohydrolase ALIDE2_RS01475 PF08450 SMP-30/Gluconolactonase/LRE-like region ALIDE2_RS01480 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE2_RS01485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE2_RS01490 PF00171 Aldehyde dehydrogenase family ALIDE2_RS01495 PF09339 IclR helix-turn-helix domain ALIDE2_RS01495 PF01614 Bacterial transcriptional regulator ALIDE2_RS01515 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS01525 PF00005 ABC transporter ALIDE2_RS01525 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS01530 PF00005 ABC transporter ALIDE2_RS01540 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS01540 PF07729 FCD domain ALIDE2_RS01545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS01545 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS01545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS01555 PF01636 Phosphotransferase enzyme family ALIDE2_RS01560 PF03372 Endonuclease/Exonuclease/phosphatase family ALIDE2_RS01565 PF00156 Phosphoribosyl transferase domain ALIDE2_RS01575 PF02934 GatB/GatE catalytic domain ALIDE2_RS01575 PF02637 GatB domain ALIDE2_RS01580 PF01425 Amidase ALIDE2_RS01585 PF02686 Glu-tRNAGln amidotransferase C subunit ALIDE2_RS01600 PF04093 rod shape-determining protein MreD ALIDE2_RS01605 PF00905 Penicillin binding protein transpeptidase domain ALIDE2_RS01605 PF03717 Penicillin-binding Protein dimerisation domain ALIDE2_RS01610 PF00491 Arginase family ALIDE2_RS01615 PF01925 Sulfite exporter TauE/SafE ALIDE2_RS01620 PF00732 GMC oxidoreductase ALIDE2_RS01620 PF05199 GMC oxidoreductase ALIDE2_RS01625 PF02405 Permease MlaE ALIDE2_RS01630 PF00005 ABC transporter ALIDE2_RS01635 PF02470 MlaD protein ALIDE2_RS01645 PF03466 LysR substrate binding domain ALIDE2_RS01645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS01650 PF00330 Aconitase family (aconitate hydratase) ALIDE2_RS01655 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS01660 PF03737 Aldolase/RraA ALIDE2_RS01665 PF01914 MarC family integral membrane protein ALIDE2_RS01670 PF01738 Dienelactone hydrolase family ALIDE2_RS01675 PF07690 Major Facilitator Superfamily ALIDE2_RS01680 PF13533 Biotin-lipoyl like ALIDE2_RS01685 PF02321 Outer membrane efflux protein ALIDE2_RS01695 PF01544 CorA-like Mg2+ transporter protein ALIDE2_RS01700 PF00490 Delta-aminolevulinic acid dehydratase ALIDE2_RS01710 PF03653 Uncharacterised protein family (UPF0093) ALIDE2_RS01725 PF02129 X-Pro dipeptidyl-peptidase (S15 family) ALIDE2_RS01730 PF00768 D-alanyl-D-alanine carboxypeptidase ALIDE2_RS01730 PF07943 Penicillin-binding protein 5, C-terminal domain ALIDE2_RS01735 PF00164 Ribosomal protein S12/S23 ALIDE2_RS01740 PF00177 Ribosomal protein S7p/S5e ALIDE2_RS01745 PF03144 Elongation factor Tu domain 2 ALIDE2_RS01745 PF14492 Elongation Factor G, domain II ALIDE2_RS01745 PF03764 Elongation factor G, domain IV ALIDE2_RS01745 PF00679 Elongation factor G C-terminus ALIDE2_RS01745 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS01750 PF03143 Elongation factor Tu C-terminal domain ALIDE2_RS01750 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS01750 PF03144 Elongation factor Tu domain 2 ALIDE2_RS01755 PF00338 Ribosomal protein S10p/S20e ALIDE2_RS01760 PF00297 Ribosomal protein L3 ALIDE2_RS01765 PF00573 Ribosomal protein L4/L1 family ALIDE2_RS01770 PF00276 Ribosomal protein L23 ALIDE2_RS01775 PF00181 Ribosomal Proteins L2, RNA binding domain ALIDE2_RS01775 PF03947 Ribosomal Proteins L2, C-terminal domain ALIDE2_RS01780 PF00203 Ribosomal protein S19 ALIDE2_RS01785 PF00237 Ribosomal protein L22p/L17e ALIDE2_RS01790 PF07650 KH domain ALIDE2_RS01790 PF00189 Ribosomal protein S3, C-terminal domain ALIDE2_RS01795 PF00252 Ribosomal protein L16p/L10e ALIDE2_RS01800 PF00831 Ribosomal L29 protein ALIDE2_RS01805 PF00366 Ribosomal protein S17 ALIDE2_RS01810 PF08534 Redoxin ALIDE2_RS01810 PF00462 Glutaredoxin ALIDE2_RS01815 PF00583 Acetyltransferase (GNAT) family ALIDE2_RS01825 PF00578 AhpC/TSA family ALIDE2_RS01840 PF00381 PTS HPr component phosphorylation site ALIDE2_RS01845 PF02896 PEP-utilising enzyme, TIM barrel domain ALIDE2_RS01845 PF00391 PEP-utilising enzyme, mobile domain ALIDE2_RS01845 PF05524 PEP-utilising enzyme, N-terminal ALIDE2_RS01850 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ALIDE2_RS01850 PF04055 Radical SAM superfamily ALIDE2_RS01855 PF03099 Biotin/lipoate A/B protein ligase family ALIDE2_RS01860 PF04359 Protein of unknown function (DUF493) ALIDE2_RS01870 PF00119 ATP synthase A chain ALIDE2_RS01875 PF00137 ATP synthase subunit C ALIDE2_RS01880 PF00430 ATP synthase B/B' CF(0) ALIDE2_RS01885 PF00213 ATP synthase delta (OSCP) subunit ALIDE2_RS01890 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALIDE2_RS01890 PF00306 ATP synthase alpha/beta chain, C terminal domain ALIDE2_RS01890 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALIDE2_RS01895 PF00231 ATP synthase ALIDE2_RS01900 PF02874 ATP synthase alpha/beta family, beta-barrel domain ALIDE2_RS01900 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALIDE2_RS01905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ALIDE2_RS01920 PF13007 Transposase C of IS166 homeodomain ALIDE2_RS01920 PF13005 zinc-finger binding domain of transposase IS66 ALIDE2_RS01920 PF03050 Transposase IS66 family ALIDE2_RS01920 PF13817 IS66 C-terminal element ALIDE2_RS01935 PF03466 LysR substrate binding domain ALIDE2_RS01935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS01965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS01970 PF02321 Outer membrane efflux protein ALIDE2_RS01975 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS01980 PF00529 HlyD membrane-fusion protein of T1SS ALIDE2_RS01980 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS01985 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS01985 PF08361 MAATS-type transcriptional repressor, C-terminal region ALIDE2_RS02010 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS02010 PF03143 Elongation factor Tu C-terminal domain ALIDE2_RS02010 PF03144 Elongation factor Tu domain 2 ALIDE2_RS02020 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ALIDE2_RS02025 PF00467 KOW motif ALIDE2_RS02025 PF02357 Transcription termination factor nusG ALIDE2_RS02030 PF00298 Ribosomal protein L11, RNA binding domain ALIDE2_RS02030 PF03946 Ribosomal protein L11, N-terminal domain ALIDE2_RS02035 PF00687 Ribosomal protein L1p/L10e family ALIDE2_RS02040 PF00466 Ribosomal protein L10 ALIDE2_RS02045 PF16320 Ribosomal protein L7/L12 dimerisation domain ALIDE2_RS02045 PF00542 Ribosomal protein L7/L12 C-terminal domain ALIDE2_RS02050 PF04563 RNA polymerase beta subunit ALIDE2_RS02050 PF04561 RNA polymerase Rpb2, domain 2 ALIDE2_RS02050 PF04565 RNA polymerase Rpb2, domain 3 ALIDE2_RS02050 PF10385 RNA polymerase beta subunit external 1 domain ALIDE2_RS02050 PF00562 RNA polymerase Rpb2, domain 6 ALIDE2_RS02050 PF04560 RNA polymerase Rpb2, domain 7 ALIDE2_RS02055 PF04997 RNA polymerase Rpb1, domain 1 ALIDE2_RS02055 PF04998 RNA polymerase Rpb1, domain 5 ALIDE2_RS02055 PF00623 RNA polymerase Rpb1, domain 2 ALIDE2_RS02055 PF05000 RNA polymerase Rpb1, domain 4 ALIDE2_RS02055 PF04983 RNA polymerase Rpb1, domain 3 ALIDE2_RS02065 PF01189 16S rRNA methyltransferase RsmB/F ALIDE2_RS02065 PF01029 NusB family ALIDE2_RS02075 PF00989 PAS fold ALIDE2_RS02075 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS02075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS02075 PF00672 HAMP domain ALIDE2_RS02080 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS02080 PF00072 Response regulator receiver domain ALIDE2_RS02080 PF00158 Sigma-54 interaction domain ALIDE2_RS02095 PF13276 HTH-like domain ALIDE2_RS02095 PF13683 Integrase core domain ALIDE2_RS02100 PF01527 Transposase ALIDE2_RS02165 PF13356 Arm DNA-binding domain ALIDE2_RS02165 PF00589 Phage integrase family ALIDE2_RS02175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALIDE2_RS02175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALIDE2_RS02175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALIDE2_RS02190 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALIDE2_RS02190 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALIDE2_RS02190 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALIDE2_RS02195 PF01370 NAD dependent epimerase/dehydratase family ALIDE2_RS02200 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ALIDE2_RS02205 PF00535 Glycosyl transferase family 2 ALIDE2_RS02215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALIDE2_RS02220 PF02021 Uncharacterised protein family UPF0102 ALIDE2_RS02225 PF13580 SIS domain ALIDE2_RS02235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE2_RS02235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE2_RS02240 PF00437 Type II/IV secretion system protein ALIDE2_RS02245 PF13545 Crp-like helix-turn-helix domain ALIDE2_RS02245 PF00027 Cyclic nucleotide-binding domain ALIDE2_RS02250 PF00437 Type II/IV secretion system protein ALIDE2_RS02255 PF01168 Alanine racemase, N-terminal domain ALIDE2_RS02270 PF04286 Protein of unknown function (DUF445) ALIDE2_RS02275 PF01565 FAD binding domain ALIDE2_RS02275 PF02913 FAD linked oxidases, C-terminal domain ALIDE2_RS02280 PF03466 LysR substrate binding domain ALIDE2_RS02280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS02285 PF00551 Formyl transferase ALIDE2_RS02290 PF08448 PAS fold ALIDE2_RS02290 PF08447 PAS fold ALIDE2_RS02290 PF00563 EAL domain ALIDE2_RS02290 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS02300 PF03477 ATP cone domain ALIDE2_RS02300 PF02867 Ribonucleotide reductase, barrel domain ALIDE2_RS02300 PF00317 Ribonucleotide reductase, all-alpha domain ALIDE2_RS02305 PF07730 Histidine kinase ALIDE2_RS02310 PF00072 Response regulator receiver domain ALIDE2_RS02310 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS02315 PF07690 Major Facilitator Superfamily ALIDE2_RS02320 PF07690 Major Facilitator Superfamily ALIDE2_RS02325 PF00384 Molybdopterin oxidoreductase ALIDE2_RS02325 PF01568 Molydopterin dinucleotide binding domain ALIDE2_RS02325 PF14710 Respiratory nitrate reductase alpha N-terminal ALIDE2_RS02330 PF14711 Respiratory nitrate reductase beta C-terminal ALIDE2_RS02330 PF13247 4Fe-4S dicluster domain ALIDE2_RS02335 PF02613 Nitrate reductase delta subunit ALIDE2_RS02340 PF02665 Nitrate reductase gamma subunit ALIDE2_RS02350 PF00484 Carbonic anhydrase ALIDE2_RS02365 PF01814 Hemerythrin HHE cation binding domain ALIDE2_RS02390 PF01568 Molydopterin dinucleotide binding domain ALIDE2_RS02390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALIDE2_RS02390 PF00384 Molybdopterin oxidoreductase ALIDE2_RS02400 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE2_RS02405 PF02515 CoA-transferase family III ALIDE2_RS02410 PF01575 MaoC like domain ALIDE2_RS02415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS02415 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS02415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS02420 PF01575 MaoC like domain ALIDE2_RS02430 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE2_RS02440 PF07687 Peptidase dimerisation domain ALIDE2_RS02440 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS02455 PF03352 Methyladenine glycosylase ALIDE2_RS02470 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS02475 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS02480 PF00501 AMP-binding enzyme ALIDE2_RS02480 PF14535 AMP-binding enzyme C-terminal domain ALIDE2_RS02485 PF00005 ABC transporter ALIDE2_RS02500 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS02505 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS02505 PF00005 ABC transporter ALIDE2_RS02510 PF00501 AMP-binding enzyme ALIDE2_RS02515 PF01471 Putative peptidoglycan binding domain ALIDE2_RS02515 PF13401 AAA domain ALIDE2_RS02525 PF13545 Crp-like helix-turn-helix domain ALIDE2_RS02525 PF00027 Cyclic nucleotide-binding domain ALIDE2_RS02530 PF01479 S4 domain ALIDE2_RS02530 PF00849 RNA pseudouridylate synthase ALIDE2_RS02535 PF00183 Hsp90 protein ALIDE2_RS02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS02545 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS02550 PF01636 Phosphotransferase enzyme family ALIDE2_RS02555 PF00069 Protein kinase domain ALIDE2_RS02555 PF03793 PASTA domain ALIDE2_RS02565 PF02515 CoA-transferase family III ALIDE2_RS02575 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE2_RS02580 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE2_RS02585 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE2_RS02590 PF04909 Amidohydrolase ALIDE2_RS02595 PF01042 Endoribonuclease L-PSP ALIDE2_RS02600 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS02605 PF01613 Flavin reductase like domain ALIDE2_RS02615 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE2_RS02615 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS02620 PF00732 GMC oxidoreductase ALIDE2_RS02620 PF05199 GMC oxidoreductase ALIDE2_RS02630 PF01061 ABC-2 type transporter ALIDE2_RS02635 PF00005 ABC transporter ALIDE2_RS02640 PF07519 Tannase and feruloyl esterase ALIDE2_RS02645 PF01048 Phosphorylase superfamily ALIDE2_RS02645 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus ALIDE2_RS02650 PF13188 PAS domain ALIDE2_RS02650 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS02650 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS02650 PF00563 EAL domain ALIDE2_RS02655 PF16916 Dimerisation domain of Zinc Transporter ALIDE2_RS02655 PF01545 Cation efflux family ALIDE2_RS02660 PF02580 D-Tyr-tRNA(Tyr) deacylase ALIDE2_RS02665 PF01925 Sulfite exporter TauE/SafE ALIDE2_RS02670 PF03466 LysR substrate binding domain ALIDE2_RS02670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS02675 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS02680 PF02515 CoA-transferase family III ALIDE2_RS02685 PF00107 Zinc-binding dehydrogenase ALIDE2_RS02685 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS02690 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS02690 PF00501 AMP-binding enzyme ALIDE2_RS02695 PF02130 Uncharacterized protein family UPF0054 ALIDE2_RS02700 PF02562 PhoH-like protein ALIDE2_RS02705 PF01330 RuvA N terminal domain ALIDE2_RS02705 PF07499 RuvA, C-terminal domain ALIDE2_RS02715 PF00012 Hsp70 protein ALIDE2_RS02720 PF00012 Hsp70 protein ALIDE2_RS02730 PF05496 Holliday junction DNA helicase RuvB P-loop domain ALIDE2_RS02730 PF17864 RuvB AAA lid domain ALIDE2_RS02730 PF05491 RuvB C-terminal winged helix domain ALIDE2_RS02735 PF02308 MgtC family ALIDE2_RS02750 PF01168 Alanine racemase, N-terminal domain ALIDE2_RS02750 PF14031 Putative serine dehydratase domain ALIDE2_RS02755 PF00300 Histidine phosphatase superfamily (branch 1) ALIDE2_RS02765 PF01171 PP-loop family ALIDE2_RS02800 PF00480 ROK family ALIDE2_RS02805 PF00982 Glycosyltransferase family 20 ALIDE2_RS02810 PF00723 Glycosyl hydrolases family 15 ALIDE2_RS02815 PF02358 Trehalose-phosphatase ALIDE2_RS02820 PF00085 Thioredoxin ALIDE2_RS02825 PF01966 HD domain ALIDE2_RS02825 PF01743 Poly A polymerase head domain ALIDE2_RS02825 PF12627 Probable RNA and SrmB- binding site of polymerase A ALIDE2_RS02830 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS02830 PF01590 GAF domain ALIDE2_RS02830 PF00158 Sigma-54 interaction domain ALIDE2_RS02845 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS02860 PF01812 5-formyltetrahydrofolate cyclo-ligase family ALIDE2_RS02865 PF01551 Peptidase family M23 ALIDE2_RS02865 PF10145 Phage-related minor tail protein ALIDE2_RS02865 PF01464 Transglycosylase SLT domain ALIDE2_RS02880 PF13640 2OG-Fe(II) oxygenase superfamily ALIDE2_RS02880 PF18331 PKHD-type hydroxylase C-terminal domain ALIDE2_RS02885 PF01070 FMN-dependent dehydrogenase ALIDE2_RS02890 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS02890 PF00593 TonB dependent receptor ALIDE2_RS02900 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS02900 PF00501 AMP-binding enzyme ALIDE2_RS02910 PF02801 Beta-ketoacyl synthase, C-terminal domain ALIDE2_RS02910 PF00109 Beta-ketoacyl synthase, N-terminal domain ALIDE2_RS02915 PF07977 FabA-like domain ALIDE2_RS02920 PF00795 Carbon-nitrogen hydrolase ALIDE2_RS02925 PF00571 CBS domain ALIDE2_RS02925 PF03471 Transporter associated domain ALIDE2_RS02935 PF01037 Lrp/AsnC ligand binding domain ALIDE2_RS02940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE2_RS02945 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ALIDE2_RS02950 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal ALIDE2_RS02950 PF00676 Dehydrogenase E1 component ALIDE2_RS02955 PF02780 Transketolase, C-terminal domain ALIDE2_RS02955 PF02779 Transketolase, pyrimidine binding domain ALIDE2_RS02960 PF00364 Biotin-requiring enzyme ALIDE2_RS02960 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE2_RS02960 PF02817 e3 binding domain ALIDE2_RS02965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE2_RS02965 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS02970 PF02091 Glycyl-tRNA synthetase alpha subunit ALIDE2_RS02975 PF05746 DALR anticodon binding domain ALIDE2_RS02975 PF02092 Glycyl-tRNA synthetase beta subunit ALIDE2_RS02985 PF01553 Acyltransferase ALIDE2_RS03000 PF01476 LysM domain ALIDE2_RS03000 PF04972 BON domain ALIDE2_RS03005 PF03309 Type III pantothenate kinase ALIDE2_RS03010 PF08361 MAATS-type transcriptional repressor, C-terminal region ALIDE2_RS03010 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS03020 PF16363 GDP-mannose 4,6 dehydratase ALIDE2_RS03025 PF04321 RmlD substrate binding domain ALIDE2_RS03030 PF00483 Nucleotidyl transferase ALIDE2_RS03035 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ALIDE2_RS03045 PF00535 Glycosyl transferase family 2 ALIDE2_RS03050 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ALIDE2_RS03050 PF00437 Type II/IV secretion system protein ALIDE2_RS03055 PF00482 Type II secretion system (T2SS), protein F ALIDE2_RS03065 PF07963 Prokaryotic N-terminal methylation motif ALIDE2_RS03065 PF00114 Pilin (bacterial filament) ALIDE2_RS03075 PF11612 Type II secretion system (T2SS), protein J ALIDE2_RS03075 PF07963 Prokaryotic N-terminal methylation motif ALIDE2_RS03080 PF03934 Type II secretion system (T2SS), protein K ALIDE2_RS03115 PF01061 ABC-2 type transporter ALIDE2_RS03120 PF00005 ABC transporter ALIDE2_RS03120 PF14524 Wzt C-terminal domain ALIDE2_RS03130 PF00398 Ribosomal RNA adenine dimethylase ALIDE2_RS03135 PF01551 Peptidase family M23 ALIDE2_RS03135 PF01464 Transglycosylase SLT domain ALIDE2_RS03135 PF10145 Phage-related minor tail protein ALIDE2_RS03145 PF00696 Amino acid kinase family ALIDE2_RS03150 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS03160 PF12806 Acetyl-CoA dehydrogenase C-terminal like ALIDE2_RS03160 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS03160 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS03160 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS03170 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE2_RS03170 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS03170 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS03175 PF02803 Thiolase, C-terminal domain ALIDE2_RS03175 PF00108 Thiolase, N-terminal domain ALIDE2_RS03185 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS03195 PF03061 Thioesterase superfamily ALIDE2_RS03200 PF00664 ABC transporter transmembrane region ALIDE2_RS03200 PF00005 ABC transporter ALIDE2_RS03210 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE2_RS03215 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ALIDE2_RS03215 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALIDE2_RS03220 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ALIDE2_RS03225 PF03466 LysR substrate binding domain ALIDE2_RS03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS03230 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS03235 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS03240 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS03245 PF00005 ABC transporter ALIDE2_RS03250 PF02423 Ornithine cyclodeaminase/mu-crystallin family ALIDE2_RS03260 PF16658 Class II release factor RF3, C-terminal domain ALIDE2_RS03260 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS03260 PF03144 Elongation factor Tu domain 2 ALIDE2_RS03270 PF05221 S-adenosyl-L-homocysteine hydrolase ALIDE2_RS03270 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ALIDE2_RS03275 PF01479 S4 domain ALIDE2_RS03275 PF01728 FtsJ-like methyltransferase ALIDE2_RS03280 PF02219 Methylenetetrahydrofolate reductase ALIDE2_RS03285 PF03330 Lytic transglycolase ALIDE2_RS03290 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ALIDE2_RS03295 PF00069 Protein kinase domain ALIDE2_RS03295 PF08308 PEGA domain ALIDE2_RS03300 PF00572 Ribosomal protein L13 ALIDE2_RS03305 PF00380 Ribosomal protein S9/S16 ALIDE2_RS03310 PF01521 Iron-sulphur cluster biosynthesis ALIDE2_RS03315 PF03702 Anhydro-N-acetylmuramic acid kinase ALIDE2_RS03320 PF04225 Opacity-associated protein A LysM-like domain ALIDE2_RS03320 PF01551 Peptidase family M23 ALIDE2_RS03325 PF01479 S4 domain ALIDE2_RS03325 PF00579 tRNA synthetases class I (W and Y) ALIDE2_RS03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS03330 PF03466 LysR substrate binding domain ALIDE2_RS03335 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE2_RS03335 PF12804 MobA-like NTP transferase domain ALIDE2_RS03340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS03340 PF13493 Domain of unknown function (DUF4118) ALIDE2_RS03340 PF13492 GAF domain ALIDE2_RS03340 PF02702 Osmosensitive K+ channel His kinase sensor domain ALIDE2_RS03340 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS03350 PF01556 DnaJ C terminal domain ALIDE2_RS03350 PF00226 DnaJ domain ALIDE2_RS03355 PF01037 Lrp/AsnC ligand binding domain ALIDE2_RS03360 PF01380 SIS domain ALIDE2_RS03365 PF01695 IstB-like ATP binding protein ALIDE2_RS03370 PF00665 Integrase core domain ALIDE2_RS03395 PF00174 Oxidoreductase molybdopterin binding domain ALIDE2_RS03400 PF01292 Prokaryotic cytochrome b561 ALIDE2_RS03405 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS03405 PF00072 Response regulator receiver domain ALIDE2_RS03410 PF00989 PAS fold ALIDE2_RS03410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS03410 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS03410 PF18698 Histidine kinase sensor domain ALIDE2_RS03410 PF00672 HAMP domain ALIDE2_RS03430 PF00483 Nucleotidyl transferase ALIDE2_RS03430 PF01050 Mannose-6-phosphate isomerase ALIDE2_RS03445 PF13614 AAA domain ALIDE2_RS03450 PF13401 AAA domain ALIDE2_RS03450 PF01471 Putative peptidoglycan binding domain ALIDE2_RS03475 PF13537 Glutamine amidotransferase domain ALIDE2_RS03475 PF00733 Asparagine synthase ALIDE2_RS03480 PF00534 Glycosyl transferases group 1 ALIDE2_RS03490 PF00534 Glycosyl transferases group 1 ALIDE2_RS03490 PF13439 Glycosyltransferase Family 4 ALIDE2_RS03520 PF00535 Glycosyl transferase family 2 ALIDE2_RS03530 PF01370 NAD dependent epimerase/dehydratase family ALIDE2_RS03535 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ALIDE2_RS03535 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ALIDE2_RS03535 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ALIDE2_RS03575 PF00501 AMP-binding enzyme ALIDE2_RS03575 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS03580 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALIDE2_RS03580 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ALIDE2_RS03585 PF00672 HAMP domain ALIDE2_RS03585 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS03585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS03590 PF00072 Response regulator receiver domain ALIDE2_RS03590 PF00158 Sigma-54 interaction domain ALIDE2_RS03590 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS03605 PF00892 EamA-like transporter family ALIDE2_RS03610 PF01040 UbiA prenyltransferase family ALIDE2_RS03615 PF03466 LysR substrate binding domain ALIDE2_RS03615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS03620 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS03630 PF01176 Translation initiation factor 1A / IF-1 ALIDE2_RS03635 PF13532 2OG-Fe(II) oxygenase superfamily ALIDE2_RS03640 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS03640 PF00501 AMP-binding enzyme ALIDE2_RS03645 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS03645 PF00175 Oxidoreductase NAD-binding domain ALIDE2_RS03645 PF00970 Oxidoreductase FAD-binding domain ALIDE2_RS03665 PF05981 CreA protein ALIDE2_RS03670 PF02875 Mur ligase family, glutamate ligase domain ALIDE2_RS03670 PF08245 Mur ligase middle domain ALIDE2_RS03670 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS03675 PF02875 Mur ligase family, glutamate ligase domain ALIDE2_RS03675 PF08245 Mur ligase middle domain ALIDE2_RS03675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS03680 PF00664 ABC transporter transmembrane region ALIDE2_RS03680 PF00005 ABC transporter ALIDE2_RS03695 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS03695 PF14492 Elongation Factor G, domain II ALIDE2_RS03695 PF00679 Elongation factor G C-terminus ALIDE2_RS03695 PF03144 Elongation factor Tu domain 2 ALIDE2_RS03695 PF03764 Elongation factor G, domain IV ALIDE2_RS03705 PF00482 Type II secretion system (T2SS), protein F ALIDE2_RS03710 PF00296 Luciferase-like monooxygenase ALIDE2_RS03720 PF00437 Type II/IV secretion system protein ALIDE2_RS03725 PF00263 Bacterial type II and III secretion system protein ALIDE2_RS03725 PF03958 Bacterial type II/III secretion system short domain ALIDE2_RS03750 PF11612 Type II secretion system (T2SS), protein J ALIDE2_RS03750 PF07963 Prokaryotic N-terminal methylation motif ALIDE2_RS03755 PF02501 Type II secretion system (T2SS), protein I ALIDE2_RS03755 PF07963 Prokaryotic N-terminal methylation motif ALIDE2_RS03765 PF07963 Prokaryotic N-terminal methylation motif ALIDE2_RS03765 PF08334 Type II secretion system (T2SS), protein G ALIDE2_RS03780 PF02654 Cobalamin-5-phosphate synthase ALIDE2_RS03785 PF00585 C-terminal regulatory domain of Threonine dehydratase ALIDE2_RS03785 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS03790 PF02566 OsmC-like protein ALIDE2_RS03795 PF03232 Ubiquinone biosynthesis protein COQ7 ALIDE2_RS03800 PF13609 Gram-negative porin ALIDE2_RS03810 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS03815 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS03815 PF07687 Peptidase dimerisation domain ALIDE2_RS03820 PF12911 N-terminal TM domain of oligopeptide transport permease C ALIDE2_RS03820 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS03825 PF00005 ABC transporter ALIDE2_RS03825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE2_RS03830 PF00005 ABC transporter ALIDE2_RS03830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE2_RS03835 PF01161 Phosphatidylethanolamine-binding protein ALIDE2_RS03840 PF01380 SIS domain ALIDE2_RS03840 PF02685 Glucokinase ALIDE2_RS03840 PF01418 Helix-turn-helix domain, rpiR family ALIDE2_RS03845 PF00923 Transaldolase/Fructose-6-phosphate aldolase ALIDE2_RS03850 PF00342 Phosphoglucose isomerase ALIDE2_RS03855 PF00118 TCP-1/cpn60 chaperonin family ALIDE2_RS03860 PF00166 Chaperonin 10 Kd subunit ALIDE2_RS03865 PF01467 Cytidylyltransferase-like ALIDE2_RS03870 PF02772 S-adenosylmethionine synthetase, central domain ALIDE2_RS03870 PF02773 S-adenosylmethionine synthetase, C-terminal domain ALIDE2_RS03870 PF00438 S-adenosylmethionine synthetase, N-terminal domain ALIDE2_RS03880 PF03279 Bacterial lipid A biosynthesis acyltransferase ALIDE2_RS03885 PF03466 LysR substrate binding domain ALIDE2_RS03885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS03890 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS03895 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS03900 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE2_RS03905 PF04909 Amidohydrolase ALIDE2_RS03910 PF01926 50S ribosome-binding GTPase ALIDE2_RS03915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS03920 PF05140 ResB-like family ALIDE2_RS03925 PF01578 Cytochrome C assembly protein ALIDE2_RS03930 PF00174 Oxidoreductase molybdopterin binding domain ALIDE2_RS03935 PF01794 Ferric reductase like transmembrane component ALIDE2_RS03945 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ALIDE2_RS03945 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ALIDE2_RS03950 PF01491 Frataxin-like domain ALIDE2_RS03955 PF00912 Transglycosylase ALIDE2_RS03955 PF17092 Penicillin-binding protein OB-like domain ALIDE2_RS03955 PF00905 Penicillin binding protein transpeptidase domain ALIDE2_RS03960 PF11104 Type IV pilus assembly protein PilM; ALIDE2_RS03965 PF05137 Fimbrial assembly protein (PilN) ALIDE2_RS03980 PF07660 Secretin and TonB N terminus short domain ALIDE2_RS03980 PF03958 Bacterial type II/III secretion system short domain ALIDE2_RS03980 PF11741 AMIN domain ALIDE2_RS03980 PF00263 Bacterial type II and III secretion system protein ALIDE2_RS03985 PF00746 LPXTG cell wall anchor motif ALIDE2_RS03990 PF01761 3-dehydroquinate synthase ALIDE2_RS03995 PF01966 HD domain ALIDE2_RS03995 PF13286 Phosphohydrolase-associated domain ALIDE2_RS04010 PF00171 Aldehyde dehydrogenase family ALIDE2_RS04030 PF01493 GXGXG motif ALIDE2_RS04030 PF00310 Glutamine amidotransferases class-II ALIDE2_RS04030 PF01645 Conserved region in glutamate synthase ALIDE2_RS04030 PF04898 Glutamate synthase central domain ALIDE2_RS04035 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS04035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ALIDE2_RS04040 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS04045 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS04050 PF00005 ABC transporter ALIDE2_RS04060 PF17284 Spermidine synthase tetramerisation domain ALIDE2_RS04065 PF02675 S-adenosylmethionine decarboxylase ALIDE2_RS04070 PF00005 ABC transporter ALIDE2_RS04075 PF02405 Permease MlaE ALIDE2_RS04080 PF02470 MlaD protein ALIDE2_RS04100 PF08448 PAS fold ALIDE2_RS04100 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS04105 PF00005 ABC transporter ALIDE2_RS04110 PF01061 ABC-2 type transporter ALIDE2_RS04115 PF01722 BolA-like protein ALIDE2_RS04120 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALIDE2_RS04125 PF01634 ATP phosphoribosyltransferase ALIDE2_RS04130 PF00815 Histidinol dehydrogenase ALIDE2_RS04145 PF00155 Aminotransferase class I and II ALIDE2_RS04150 PF00475 Imidazoleglycerol-phosphate dehydratase ALIDE2_RS04155 PF00117 Glutamine amidotransferase class-I ALIDE2_RS04160 PF00977 Histidine biosynthesis protein ALIDE2_RS04175 PF11380 Stealth protein CR2, conserved region 2 ALIDE2_RS04175 PF17101 Stealth protein CR1, conserved region 1 ALIDE2_RS04175 PF00534 Glycosyl transferases group 1 ALIDE2_RS04175 PF17103 Stealth protein CR4, conserved region 4 ALIDE2_RS04175 PF17102 Stealth protein CR3, conserved region 3 ALIDE2_RS04205 PF16363 GDP-mannose 4,6 dehydratase ALIDE2_RS04210 PF00977 Histidine biosynthesis protein ALIDE2_RS04215 PF01502 Phosphoribosyl-AMP cyclohydrolase ALIDE2_RS04220 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ALIDE2_RS04235 PF01230 HIT domain ALIDE2_RS04240 PF02416 mttA/Hcf106 family ALIDE2_RS04245 PF02416 mttA/Hcf106 family ALIDE2_RS04250 PF00902 Sec-independent protein translocase protein (TatC) ALIDE2_RS04255 PF13180 PDZ domain ALIDE2_RS04255 PF17820 PDZ domain ALIDE2_RS04260 PF01784 NIF3 (NGG1p interacting factor 3) ALIDE2_RS04265 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ALIDE2_RS04270 PF01741 Large-conductance mechanosensitive channel, MscL ALIDE2_RS04275 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ALIDE2_RS04275 PF00355 Rieske [2Fe-2S] domain ALIDE2_RS04280 PF00033 Cytochrome b/b6/petB ALIDE2_RS04280 PF00032 Cytochrome b(C-terminal)/b6/petD ALIDE2_RS04285 PF02167 Cytochrome C1 family ALIDE2_RS04290 PF02798 Glutathione S-transferase, N-terminal domain ALIDE2_RS04290 PF00043 Glutathione S-transferase, C-terminal domain ALIDE2_RS04295 PF04386 Stringent starvation protein B ALIDE2_RS04310 PF01043 SecA preprotein cross-linking domain ALIDE2_RS04310 PF07517 SecA DEAD-like domain ALIDE2_RS04310 PF07516 SecA Wing and Scaffold domain ALIDE2_RS04310 PF02810 SEC-C motif ALIDE2_RS04315 PF01960 ArgJ family ALIDE2_RS04325 PF00293 NUDIX domain ALIDE2_RS04330 PF03884 DNA gyrase inhibitor YacG ALIDE2_RS04335 PF07072 Cell division protein ALIDE2_RS04340 PF01121 Dephospho-CoA kinase ALIDE2_RS04345 PF01478 Type IV leader peptidase family ALIDE2_RS04345 PF06750 Bacterial Peptidase A24 N-terminal domain ALIDE2_RS04350 PF00482 Type II secretion system (T2SS), protein F ALIDE2_RS04355 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ALIDE2_RS04355 PF00437 Type II/IV secretion system protein ALIDE2_RS04360 PF00589 Phage integrase family ALIDE2_RS04390 PF01695 IstB-like ATP binding protein ALIDE2_RS04395 PF00665 Integrase core domain ALIDE2_RS04415 PF13276 HTH-like domain ALIDE2_RS04415 PF00665 Integrase core domain ALIDE2_RS04415 PF13333 Integrase core domain ALIDE2_RS04420 PF01527 Transposase ALIDE2_RS04430 PF00348 Polyprenyl synthetase ALIDE2_RS04435 PF00829 Ribosomal prokaryotic L21 protein ALIDE2_RS04440 PF01016 Ribosomal L27 protein ALIDE2_RS04445 PF01926 50S ribosome-binding GTPase ALIDE2_RS04445 PF01018 GTP1/OBG ALIDE2_RS04450 PF01472 PUA domain ALIDE2_RS04450 PF00696 Amino acid kinase family ALIDE2_RS04455 PF00293 NUDIX domain ALIDE2_RS04460 PF03129 Anticodon binding domain ALIDE2_RS04460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALIDE2_RS04460 PF04073 Aminoacyl-tRNA editing domain ALIDE2_RS04465 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ALIDE2_RS04465 PF01464 Transglycosylase SLT domain ALIDE2_RS04470 PF01595 Cyclin M transmembrane N-terminal domain ALIDE2_RS04470 PF00571 CBS domain ALIDE2_RS04470 PF03471 Transporter associated domain ALIDE2_RS04475 PF02190 ATP-dependent protease La (LON) substrate-binding domain ALIDE2_RS04475 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS04475 PF05362 Lon protease (S16) C-terminal proteolytic domain ALIDE2_RS04480 PF00462 Glutaredoxin ALIDE2_RS04485 PF17827 PrmC N-terminal domain ALIDE2_RS04485 PF05175 Methyltransferase small domain ALIDE2_RS04490 PF03462 PCRF domain ALIDE2_RS04490 PF00472 RF-1 domain ALIDE2_RS04495 PF01488 Shikimate / quinate 5-dehydrogenase ALIDE2_RS04495 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ALIDE2_RS04495 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ALIDE2_RS04505 PF03466 LysR substrate binding domain ALIDE2_RS04505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS04510 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS04520 PF12794 Mechanosensitive ion channel inner membrane domain 1 ALIDE2_RS04520 PF00924 Mechanosensitive ion channel ALIDE2_RS04520 PF12795 Mechanosensitive ion channel porin domain ALIDE2_RS04525 PF03009 Glycerophosphoryl diester phosphodiesterase family ALIDE2_RS04530 PF17912 MalK OB fold domain ALIDE2_RS04530 PF00005 ABC transporter ALIDE2_RS04535 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS04540 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS04545 PF13416 Bacterial extracellular solute-binding protein ALIDE2_RS04550 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS04550 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS04570 PF01209 ubiE/COQ5 methyltransferase family ALIDE2_RS04585 PF03109 ABC1 family ALIDE2_RS04605 PF02938 GAD domain ALIDE2_RS04605 PF00152 tRNA synthetases class II (D, K and N) ALIDE2_RS04605 PF01336 OB-fold nucleic acid binding domain ALIDE2_RS04620 PF13091 PLD-like domain ALIDE2_RS04625 PF01227 GTP cyclohydrolase I ALIDE2_RS04640 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS04640 PF00989 PAS fold ALIDE2_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS04645 PF00072 Response regulator receiver domain ALIDE2_RS04645 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS04650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS04665 PF01810 LysE type translocator ALIDE2_RS04670 PF01425 Amidase ALIDE2_RS04675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE2_RS04680 PF00005 ABC transporter ALIDE2_RS04680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE2_RS04685 PF00005 ABC transporter ALIDE2_RS04685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE2_RS04690 PF12911 N-terminal TM domain of oligopeptide transport permease C ALIDE2_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS04695 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS04700 PF00037 4Fe-4S binding domain ALIDE2_RS04705 PF01195 Peptidyl-tRNA hydrolase ALIDE2_RS04710 PF14693 Ribosomal protein TL5, C-terminal domain ALIDE2_RS04710 PF01386 Ribosomal L25p family ALIDE2_RS04715 PF14572 Phosphoribosyl synthetase-associated domain ALIDE2_RS04715 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ALIDE2_RS04725 PF00288 GHMP kinases N terminal domain ALIDE2_RS04725 PF08544 GHMP kinases C terminal ALIDE2_RS04740 PF06827 Zinc finger found in FPG and IleRS ALIDE2_RS04740 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ALIDE2_RS04740 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ALIDE2_RS04750 PF14815 NUDIX domain ALIDE2_RS04750 PF10576 Iron-sulfur binding domain of endonuclease III ALIDE2_RS04750 PF00730 HhH-GPD superfamily base excision DNA repair protein ALIDE2_RS04750 PF00633 Helix-hairpin-helix motif ALIDE2_RS04755 PF03668 P-loop ATPase protein family ALIDE2_RS04760 PF02463 RecF/RecN/SMC N terminal domain ALIDE2_RS04765 PF01513 ATP-NAD kinase ALIDE2_RS04770 PF01628 HrcA protein C terminal domain ALIDE2_RS04770 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ALIDE2_RS04785 PF13333 Integrase core domain ALIDE2_RS04785 PF00665 Integrase core domain ALIDE2_RS04785 PF13276 HTH-like domain ALIDE2_RS04790 PF01527 Transposase ALIDE2_RS04805 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS04810 PF13006 Insertion element 4 transposase N-terminal ALIDE2_RS04810 PF01609 Transposase DDE domain ALIDE2_RS04815 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS04825 PF01292 Prokaryotic cytochrome b561 ALIDE2_RS04835 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS04835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS04835 PF08521 Two-component sensor kinase N-terminal ALIDE2_RS04840 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS04840 PF00072 Response regulator receiver domain ALIDE2_RS04855 PF00107 Zinc-binding dehydrogenase ALIDE2_RS04855 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS04860 PF10282 Lactonase, 7-bladed beta-propeller ALIDE2_RS04865 PF01464 Transglycosylase SLT domain ALIDE2_RS04865 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS04875 PF00694 Aconitase C-terminal domain ALIDE2_RS04875 PF00330 Aconitase family (aconitate hydratase) ALIDE2_RS04880 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS04885 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS04895 PF13378 Enolase C-terminal domain-like ALIDE2_RS04905 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS04910 PF00701 Dihydrodipicolinate synthetase family ALIDE2_RS04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS04915 PF03466 LysR substrate binding domain ALIDE2_RS04920 PF02881 SRP54-type protein, helical bundle domain ALIDE2_RS04920 PF00448 SRP54-type protein, GTPase domain ALIDE2_RS04925 PF05193 Peptidase M16 inactive domain ALIDE2_RS04925 PF00675 Insulinase (Peptidase family M16) ALIDE2_RS04930 PF05193 Peptidase M16 inactive domain ALIDE2_RS04940 PF01467 Cytidylyltransferase-like ALIDE2_RS04945 PF04972 BON domain ALIDE2_RS04960 PF07730 Histidine kinase ALIDE2_RS04960 PF17200 Single Cache domain 2 ALIDE2_RS04965 PF00072 Response regulator receiver domain ALIDE2_RS04965 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS04975 PF00899 ThiF family ALIDE2_RS04980 PF13180 PDZ domain ALIDE2_RS04980 PF03572 Peptidase family S41 ALIDE2_RS04985 PF00300 Histidine phosphatase superfamily (branch 1) ALIDE2_RS04990 PF00581 Rhodanese-like domain ALIDE2_RS04995 PF00462 Glutaredoxin ALIDE2_RS05000 PF02556 Preprotein translocase subunit SecB ALIDE2_RS05005 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ALIDE2_RS05005 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ALIDE2_RS05015 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05020 PF01925 Sulfite exporter TauE/SafE ALIDE2_RS05025 PF07364 Metallopeptidase family M81 ALIDE2_RS05025 PF07171 MlrC C-terminus ALIDE2_RS05030 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS05035 PF03466 LysR substrate binding domain ALIDE2_RS05040 PF02569 Pantoate-beta-alanine ligase ALIDE2_RS05045 PF02548 Ketopantoate hydroxymethyltransferase ALIDE2_RS05050 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ALIDE2_RS05050 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ALIDE2_RS05055 PF02445 Quinolinate synthetase A protein ALIDE2_RS05060 PF04715 Anthranilate synthase component I, N terminal region ALIDE2_RS05060 PF00425 chorismate binding enzyme ALIDE2_RS05070 PF00890 FAD binding domain ALIDE2_RS05070 PF02910 Fumarate reductase flavoprotein C-term ALIDE2_RS05085 PF02616 Segregation and condensation protein ScpA ALIDE2_RS05100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE2_RS05100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALIDE2_RS05105 PF01070 FMN-dependent dehydrogenase ALIDE2_RS05110 PF00890 FAD binding domain ALIDE2_RS05115 PF12833 Helix-turn-helix domain ALIDE2_RS05115 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ALIDE2_RS05120 PF00117 Glutamine amidotransferase class-I ALIDE2_RS05125 PF01168 Alanine racemase, N-terminal domain ALIDE2_RS05130 PF03594 Benzoate membrane transport protein ALIDE2_RS05135 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS05135 PF00155 Aminotransferase class I and II ALIDE2_RS05145 PF09334 tRNA synthetases class I (M) ALIDE2_RS05145 PF01588 Putative tRNA binding domain ALIDE2_RS05160 PF00581 Rhodanese-like domain ALIDE2_RS05165 PF00586 AIR synthase related protein, N-terminal domain ALIDE2_RS05165 PF02769 AIR synthase related protein, C-terminal domain ALIDE2_RS05170 PF03595 Voltage-dependent anion channel ALIDE2_RS05175 PF10609 NUBPL iron-transfer P-loop NTPase ALIDE2_RS05185 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05195 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS05195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS05195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS05200 PF02515 CoA-transferase family III ALIDE2_RS05205 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS05205 PF07729 FCD domain ALIDE2_RS05215 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE2_RS05220 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ALIDE2_RS05220 PF10531 SLBB domain ALIDE2_RS05220 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ALIDE2_RS05225 PF12838 4Fe-4S dicluster domain ALIDE2_RS05225 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALIDE2_RS05225 PF00384 Molybdopterin oxidoreductase ALIDE2_RS05225 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ALIDE2_RS05225 PF01568 Molydopterin dinucleotide binding domain ALIDE2_RS05255 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALIDE2_RS05255 PF00384 Molybdopterin oxidoreductase ALIDE2_RS05255 PF01568 Molydopterin dinucleotide binding domain ALIDE2_RS05260 PF13247 4Fe-4S dicluster domain ALIDE2_RS05280 PF02634 FdhD/NarQ family ALIDE2_RS05305 PF01152 Bacterial-like globin ALIDE2_RS05310 PF03354 Phage Terminase ALIDE2_RS05320 PF00694 Aconitase C-terminal domain ALIDE2_RS05325 PF00330 Aconitase family (aconitate hydratase) ALIDE2_RS05330 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05335 PF01713 Smr domain ALIDE2_RS05335 PF00488 MutS domain V ALIDE2_RS05345 PF04002 RadC-like JAB domain ALIDE2_RS05350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE2_RS05355 PF02401 LytB protein ALIDE2_RS05360 PF01595 Cyclin M transmembrane N-terminal domain ALIDE2_RS05360 PF00571 CBS domain ALIDE2_RS05360 PF03471 Transporter associated domain ALIDE2_RS05370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALIDE2_RS05370 PF02403 Seryl-tRNA synthetase N-terminal domain ALIDE2_RS05375 PF01062 Bestrophin, RFP-TM, chloride channel ALIDE2_RS05395 PF13356 Arm DNA-binding domain ALIDE2_RS05395 PF00589 Phage integrase family ALIDE2_RS05430 PF01062 Bestrophin, RFP-TM, chloride channel ALIDE2_RS05445 PF02397 Bacterial sugar transferase ALIDE2_RS05450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS05450 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS05460 PF00072 Response regulator receiver domain ALIDE2_RS05460 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS05465 PF00579 tRNA synthetases class I (W and Y) ALIDE2_RS05470 PF02163 Peptidase family M50 ALIDE2_RS05475 PF02203 Tar ligand binding domain homologue ALIDE2_RS05475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS05475 PF00672 HAMP domain ALIDE2_RS05480 PF01300 Telomere recombination ALIDE2_RS05485 PF02811 PHP domain ALIDE2_RS05490 PF02203 Tar ligand binding domain homologue ALIDE2_RS05490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS05490 PF00672 HAMP domain ALIDE2_RS05495 PF01368 DHH family ALIDE2_RS05495 PF02272 DHHA1 domain ALIDE2_RS05495 PF17768 RecJ OB domain ALIDE2_RS05505 PF12704 MacB-like periplasmic core domain ALIDE2_RS05505 PF02687 FtsX-like permease family ALIDE2_RS05510 PF00005 ABC transporter ALIDE2_RS05515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS05525 PF00920 Dehydratase family ALIDE2_RS05530 PF00920 Dehydratase family ALIDE2_RS05540 PF00210 Ferritin-like domain ALIDE2_RS05545 PF01790 Prolipoprotein diacylglyceryl transferase ALIDE2_RS05550 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS05550 PF07729 FCD domain ALIDE2_RS05560 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05565 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS05570 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS05570 PF00501 AMP-binding enzyme ALIDE2_RS05590 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE2_RS05605 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ALIDE2_RS05605 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS05610 PF12801 4Fe-4S binding domain ALIDE2_RS05610 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ALIDE2_RS05610 PF13746 4Fe-4S dicluster domain ALIDE2_RS05625 PF00027 Cyclic nucleotide-binding domain ALIDE2_RS05625 PF13545 Crp-like helix-turn-helix domain ALIDE2_RS05630 PF06969 HemN C-terminal domain ALIDE2_RS05630 PF04055 Radical SAM superfamily ALIDE2_RS05645 PF00563 EAL domain ALIDE2_RS05645 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS05645 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS05660 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS05660 PF00593 TonB dependent receptor ALIDE2_RS05665 PF07685 CobB/CobQ-like glutamine amidotransferase domain ALIDE2_RS05665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS05670 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ALIDE2_RS05680 PF01032 FecCD transport family ALIDE2_RS05685 PF00005 ABC transporter ALIDE2_RS05690 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ALIDE2_RS05695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALIDE2_RS05695 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALIDE2_RS05700 PF08241 Methyltransferase domain ALIDE2_RS05705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ALIDE2_RS05710 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05715 PF02515 CoA-transferase family III ALIDE2_RS05730 PF02515 CoA-transferase family III ALIDE2_RS05740 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05745 PF13577 SnoaL-like domain ALIDE2_RS05750 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS05755 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS05755 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS05755 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS05760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS05760 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS05760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS05770 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS05770 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE2_RS05770 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS05775 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS05790 PF13380 CoA binding domain ALIDE2_RS05790 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE2_RS05795 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS05795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS05795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS05800 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS05805 PF02803 Thiolase, C-terminal domain ALIDE2_RS05805 PF00108 Thiolase, N-terminal domain ALIDE2_RS05815 PF02803 Thiolase, C-terminal domain ALIDE2_RS05815 PF00108 Thiolase, N-terminal domain ALIDE2_RS05820 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05825 PF01012 Electron transfer flavoprotein domain ALIDE2_RS05830 PF01012 Electron transfer flavoprotein domain ALIDE2_RS05830 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE2_RS05835 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS05835 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS05835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS05840 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS05840 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS05840 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS05845 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS05855 PF04430 Protein of unknown function (DUF498/DUF598) ALIDE2_RS05860 PF00155 Aminotransferase class I and II ALIDE2_RS05865 PF01842 ACT domain ALIDE2_RS05865 PF03447 Homoserine dehydrogenase, NAD binding domain ALIDE2_RS05865 PF00742 Homoserine dehydrogenase ALIDE2_RS05875 PF01850 PIN domain ALIDE2_RS05880 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS05880 PF14821 Threonine synthase N terminus ALIDE2_RS05885 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ALIDE2_RS05890 PF03454 MoeA C-terminal region (domain IV) ALIDE2_RS05890 PF03453 MoeA N-terminal region (domain I and II) ALIDE2_RS05890 PF00994 Probable molybdopterin binding domain ALIDE2_RS05900 PF00701 Dihydrodipicolinate synthetase family ALIDE2_RS05915 PF02391 MoaE protein ALIDE2_RS05920 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE2_RS05920 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS05920 PF02861 Clp amino terminal domain, pathogenicity island component ALIDE2_RS05920 PF07724 AAA domain (Cdc48 subfamily) ALIDE2_RS05920 PF17871 AAA lid domain ALIDE2_RS05930 PF00171 Aldehyde dehydrogenase family ALIDE2_RS05940 PF05175 Methyltransferase small domain ALIDE2_RS05945 PF01207 Dihydrouridine synthase (Dus) ALIDE2_RS05950 PF13091 PLD-like domain ALIDE2_RS05955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALIDE2_RS05955 PF01872 RibD C-terminal domain ALIDE2_RS05960 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor ALIDE2_RS05960 PF07963 Prokaryotic N-terminal methylation motif ALIDE2_RS05965 PF05567 Neisseria PilC beta-propeller domain ALIDE2_RS05990 PF03186 CobD/Cbib protein ALIDE2_RS06000 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ALIDE2_RS06000 PF07685 CobB/CobQ-like glutamine amidotransferase domain ALIDE2_RS06005 PF02277 Phosphoribosyltransferase ALIDE2_RS06015 PF00730 HhH-GPD superfamily base excision DNA repair protein ALIDE2_RS06015 PF00633 Helix-hairpin-helix motif ALIDE2_RS06015 PF10576 Iron-sulfur binding domain of endonuclease III ALIDE2_RS06020 PF03466 LysR substrate binding domain ALIDE2_RS06020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS06025 PF01425 Amidase ALIDE2_RS06030 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS06040 PF00155 Aminotransferase class I and II ALIDE2_RS06045 PF04102 SlyX ALIDE2_RS06050 PF00248 Aldo/keto reductase family ALIDE2_RS06065 PF01152 Bacterial-like globin ALIDE2_RS06070 PF01814 Hemerythrin HHE cation binding domain ALIDE2_RS06070 PF04405 Domain of Unknown function (DUF542) ALIDE2_RS06075 PF02082 Transcriptional regulator ALIDE2_RS06080 PF06798 PrkA serine protein kinase C-terminal domain ALIDE2_RS06080 PF08298 PrkA AAA domain ALIDE2_RS06085 PF04285 Protein of unknown function (DUF444) ALIDE2_RS06090 PF04293 SpoVR like protein ALIDE2_RS06095 PF03180 NLPA lipoprotein ALIDE2_RS06100 PF07694 5TMR of 5TMR-LYT ALIDE2_RS06100 PF06580 Histidine kinase ALIDE2_RS06105 PF14698 Argininosuccinate lyase C-terminal ALIDE2_RS06105 PF00206 Lyase ALIDE2_RS06110 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS06120 PF00149 Calcineurin-like phosphoesterase ALIDE2_RS06125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS06125 PF03466 LysR substrate binding domain ALIDE2_RS06130 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS06135 PF00710 Asparaginase, N-terminal ALIDE2_RS06135 PF17763 Glutaminase/Asparaginase C-terminal domain ALIDE2_RS06140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS06140 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS06140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS06145 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE2_RS06145 PF13380 CoA binding domain ALIDE2_RS06150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS06150 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS06150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS06155 PF02515 CoA-transferase family III ALIDE2_RS06160 PF02142 MGS-like domain ALIDE2_RS06165 PF14814 Bifunctional transglycosylase second domain ALIDE2_RS06165 PF00905 Penicillin binding protein transpeptidase domain ALIDE2_RS06165 PF00912 Transglycosylase ALIDE2_RS06170 PF13689 YfiR/HmsC-like ALIDE2_RS06175 PF13188 PAS domain ALIDE2_RS06175 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS06175 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS06175 PF00563 EAL domain ALIDE2_RS06180 PF00691 OmpA family ALIDE2_RS06185 PF01070 FMN-dependent dehydrogenase ALIDE2_RS06195 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS06195 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS06195 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS06200 PF02515 CoA-transferase family III ALIDE2_RS06205 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS06210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS06210 PF03466 LysR substrate binding domain ALIDE2_RS06215 PF00817 impB/mucB/samB family ALIDE2_RS06215 PF11799 impB/mucB/samB family C-terminal domain ALIDE2_RS06220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS06220 PF08447 PAS fold ALIDE2_RS06225 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ALIDE2_RS06225 PF14489 QueF-like protein ALIDE2_RS06235 PF03883 Peroxide stress protein YaaA ALIDE2_RS06240 PF00575 S1 RNA binding domain ALIDE2_RS06240 PF12111 Polyribonucleotide phosphorylase C terminal ALIDE2_RS06240 PF10150 Ribonuclease E/G family ALIDE2_RS06245 PF00849 RNA pseudouridylate synthase ALIDE2_RS06245 PF01479 S4 domain ALIDE2_RS06250 PF13419 Haloacid dehalogenase-like hydrolase ALIDE2_RS06260 PF06965 Na+/H+ antiporter 1 ALIDE2_RS06260 PF01343 Peptidase family S49 ALIDE2_RS06265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALIDE2_RS06270 PF02545 Maf-like protein ALIDE2_RS06275 PF02620 Large ribosomal RNA subunit accumulation protein YceD ALIDE2_RS06280 PF01783 Ribosomal L32p protein family ALIDE2_RS06285 PF02504 Fatty acid synthesis protein ALIDE2_RS06290 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ALIDE2_RS06290 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ALIDE2_RS06295 PF00698 Acyl transferase domain ALIDE2_RS06305 PF00550 Phosphopantetheine attachment site ALIDE2_RS06310 PF00109 Beta-ketoacyl synthase, N-terminal domain ALIDE2_RS06310 PF02801 Beta-ketoacyl synthase, C-terminal domain ALIDE2_RS06320 PF08281 Sigma-70, region 4 ALIDE2_RS06320 PF04542 Sigma-70 region 2 ALIDE2_RS06335 PF13180 PDZ domain ALIDE2_RS06340 PF06421 GTP-binding protein LepA C-terminus ALIDE2_RS06340 PF03144 Elongation factor Tu domain 2 ALIDE2_RS06340 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS06340 PF00679 Elongation factor G C-terminus ALIDE2_RS06345 PF10502 Signal peptidase, peptidase S26 ALIDE2_RS06355 PF00035 Double-stranded RNA binding motif ALIDE2_RS06355 PF14622 Ribonuclease-III-like ALIDE2_RS06360 PF01926 50S ribosome-binding GTPase ALIDE2_RS06360 PF07650 KH domain ALIDE2_RS06365 PF11967 Recombination protein O N terminal ALIDE2_RS06365 PF02565 Recombination protein O C terminal ALIDE2_RS06370 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ALIDE2_RS06375 PF01648 4'-phosphopantetheinyl transferase superfamily ALIDE2_RS06380 PF00933 Glycosyl hydrolase family 3 N terminal domain ALIDE2_RS06385 PF00365 Phosphofructokinase ALIDE2_RS06390 PF00005 ABC transporter ALIDE2_RS06395 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS06395 PF00005 ABC transporter ALIDE2_RS06400 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS06400 PF11862 Domain of unknown function (DUF3382) ALIDE2_RS06405 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS06410 PF13458 Periplasmic binding protein ALIDE2_RS06420 PF01336 OB-fold nucleic acid binding domain ALIDE2_RS06420 PF00152 tRNA synthetases class II (D, K and N) ALIDE2_RS06425 PF02397 Bacterial sugar transferase ALIDE2_RS06430 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ALIDE2_RS06435 PF08003 Protein of unknown function (DUF1698) ALIDE2_RS06445 PF13439 Glycosyltransferase Family 4 ALIDE2_RS06450 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE2_RS06460 PF02719 Polysaccharide biosynthesis protein ALIDE2_RS06470 PF02325 YGGT family ALIDE2_RS06475 PF17848 Acetyl-coA carboxylase zinc finger domain ALIDE2_RS06475 PF01039 Carboxyl transferase domain ALIDE2_RS06480 PF00290 Tryptophan synthase alpha chain ALIDE2_RS06485 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS06490 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ALIDE2_RS06495 PF01416 tRNA pseudouridine synthase ALIDE2_RS06505 PF02774 Semialdehyde dehydrogenase, dimerisation domain ALIDE2_RS06505 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALIDE2_RS06510 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE2_RS06515 PF00694 Aconitase C-terminal domain ALIDE2_RS06520 PF08085 Entericidin EcnA/B family ALIDE2_RS06525 PF00330 Aconitase family (aconitate hydratase) ALIDE2_RS06535 PF10996 Beta-Casp domain ALIDE2_RS06535 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS06535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ALIDE2_RS06540 PF00067 Cytochrome P450 ALIDE2_RS06545 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ALIDE2_RS06550 PF02441 Flavoprotein ALIDE2_RS06555 PF08859 DGC domain ALIDE2_RS06560 PF02036 SCP-2 sterol transfer family ALIDE2_RS06565 PF01136 Peptidase family U32 ALIDE2_RS06570 PF01136 Peptidase family U32 ALIDE2_RS06575 PF01212 Beta-eliminating lyase ALIDE2_RS06585 PF00684 DnaJ central domain ALIDE2_RS06585 PF01556 DnaJ C terminal domain ALIDE2_RS06585 PF00226 DnaJ domain ALIDE2_RS06590 PF00012 Hsp70 protein ALIDE2_RS06595 PF01025 GrpE ALIDE2_RS06600 PF01250 Ribosomal protein S6 ALIDE2_RS06610 PF01084 Ribosomal protein S18 ALIDE2_RS06615 PF01281 Ribosomal protein L9, N-terminal domain ALIDE2_RS06615 PF03948 Ribosomal protein L9, C-terminal domain ALIDE2_RS06620 PF03796 DnaB-like helicase C terminal domain ALIDE2_RS06620 PF00772 DnaB-like helicase N terminal domain ALIDE2_RS06625 PF00171 Aldehyde dehydrogenase family ALIDE2_RS06630 PF02562 PhoH-like protein ALIDE2_RS06630 PF13638 PIN domain ALIDE2_RS06635 PF00578 AhpC/TSA family ALIDE2_RS06660 PF00390 Malic enzyme, N-terminal domain ALIDE2_RS06660 PF01515 Phosphate acetyl/butaryl transferase ALIDE2_RS06660 PF03949 Malic enzyme, NAD binding domain ALIDE2_RS06665 PF00860 Permease family ALIDE2_RS06670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS06670 PF02203 Tar ligand binding domain homologue ALIDE2_RS06670 PF00672 HAMP domain ALIDE2_RS06680 PF00563 EAL domain ALIDE2_RS06680 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS06680 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS06685 PF07687 Peptidase dimerisation domain ALIDE2_RS06685 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS06690 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS06690 PF07687 Peptidase dimerisation domain ALIDE2_RS06700 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS06700 PF07729 FCD domain ALIDE2_RS06705 PF03466 LysR substrate binding domain ALIDE2_RS06705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS06710 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE2_RS06715 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS06720 PF13660 Domain of unknown function (DUF4147) ALIDE2_RS06720 PF05161 MOFRL family ALIDE2_RS06730 PF00202 Aminotransferase class-III ALIDE2_RS06735 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS06740 PF03466 LysR substrate binding domain ALIDE2_RS06740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS06745 PF00205 Thiamine pyrophosphate enzyme, central domain ALIDE2_RS06745 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALIDE2_RS06745 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE2_RS06750 PF01261 Xylose isomerase-like TIM barrel ALIDE2_RS06755 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE2_RS06755 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE2_RS06770 PF00576 HIUase/Transthyretin family ALIDE2_RS06790 PF00692 dUTPase ALIDE2_RS06795 PF04228 Putative neutral zinc metallopeptidase ALIDE2_RS06800 PF00270 DEAD/DEAH box helicase ALIDE2_RS06800 PF00271 Helicase conserved C-terminal domain ALIDE2_RS06815 PF12679 ABC-2 family transporter protein ALIDE2_RS06820 PF00005 ABC transporter ALIDE2_RS06825 PF05048 Periplasmic copper-binding protein (NosD) ALIDE2_RS06830 PF12801 4Fe-4S binding domain ALIDE2_RS06830 PF04205 FMN-binding domain ALIDE2_RS06835 PF13473 Cupredoxin-like domain ALIDE2_RS06835 PF18793 Nitrous oxide reductase propeller repeat 2 ALIDE2_RS06835 PF18764 Nitrous oxide reductase propeller repeat ALIDE2_RS06845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS06855 PF00149 Calcineurin-like phosphoesterase ALIDE2_RS06860 PF00816 H-NS histone family ALIDE2_RS06865 PF00694 Aconitase C-terminal domain ALIDE2_RS06865 PF00330 Aconitase family (aconitate hydratase) ALIDE2_RS06870 PF01494 FAD binding domain ALIDE2_RS06880 PF07690 Major Facilitator Superfamily ALIDE2_RS06885 PF00072 Response regulator receiver domain ALIDE2_RS06885 PF04397 LytTr DNA-binding domain ALIDE2_RS06890 PF06580 Histidine kinase ALIDE2_RS06890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS06905 PF02673 Bacitracin resistance protein BacA ALIDE2_RS06915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS06920 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS06925 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS06930 PF02321 Outer membrane efflux protein ALIDE2_RS06935 PF05190 MutS family domain IV ALIDE2_RS06935 PF01624 MutS domain I ALIDE2_RS06935 PF05192 MutS domain III ALIDE2_RS06935 PF00488 MutS domain V ALIDE2_RS06935 PF05188 MutS domain II ALIDE2_RS06945 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE2_RS06960 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS06965 PF01070 FMN-dependent dehydrogenase ALIDE2_RS06975 PF16655 PhoD-like phosphatase, N-terminal domain ALIDE2_RS06975 PF09423 PhoD-like phosphatase ALIDE2_RS06980 PF00072 Response regulator receiver domain ALIDE2_RS06980 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS06985 PF01975 Survival protein SurE ALIDE2_RS06995 PF01476 LysM domain ALIDE2_RS06995 PF01551 Peptidase family M23 ALIDE2_RS07000 PF00849 RNA pseudouridylate synthase ALIDE2_RS07000 PF01479 S4 domain ALIDE2_RS07005 PF04079 Segregation and condensation complex subunit ScpB ALIDE2_RS07010 PF01479 S4 domain ALIDE2_RS07010 PF00849 RNA pseudouridylate synthase ALIDE2_RS07015 PF00334 Nucleoside diphosphate kinase ALIDE2_RS07020 PF04055 Radical SAM superfamily ALIDE2_RS07035 PF04551 GcpE protein ALIDE2_RS07040 PF13393 Histidyl-tRNA synthetase ALIDE2_RS07040 PF03129 Anticodon binding domain ALIDE2_RS07050 PF13360 PQQ-like domain ALIDE2_RS07055 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ALIDE2_RS07055 PF01926 50S ribosome-binding GTPase ALIDE2_RS07060 PF17209 Hfq protein ALIDE2_RS07065 PF16360 GTP-binding GTPase Middle Region ALIDE2_RS07065 PF13167 GTP-binding GTPase N-terminal ALIDE2_RS07065 PF01926 50S ribosome-binding GTPase ALIDE2_RS07070 PF12221 Bacterial membrane protein N terminal ALIDE2_RS07070 PF01145 SPFH domain / Band 7 family ALIDE2_RS07075 PF01145 SPFH domain / Band 7 family ALIDE2_RS07085 PF13393 Histidyl-tRNA synthetase ALIDE2_RS07090 PF00709 Adenylosuccinate synthetase ALIDE2_RS07125 PF01479 S4 domain ALIDE2_RS07125 PF00849 RNA pseudouridylate synthase ALIDE2_RS07155 PF00120 Glutamine synthetase, catalytic domain ALIDE2_RS07155 PF03951 Glutamine synthetase, beta-Grasp domain ALIDE2_RS07165 PF00989 PAS fold ALIDE2_RS07165 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS07165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS07170 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS07170 PF00072 Response regulator receiver domain ALIDE2_RS07170 PF00158 Sigma-54 interaction domain ALIDE2_RS07175 PF03372 Endonuclease/Exonuclease/phosphatase family ALIDE2_RS07185 PF03814 Potassium-transporting ATPase A subunit ALIDE2_RS07195 PF02669 K+-transporting ATPase, c chain ALIDE2_RS07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS07200 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS07200 PF02702 Osmosensitive K+ channel His kinase sensor domain ALIDE2_RS07200 PF13492 GAF domain ALIDE2_RS07200 PF13493 Domain of unknown function (DUF4118) ALIDE2_RS07205 PF00072 Response regulator receiver domain ALIDE2_RS07205 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS07210 PF13340 Putative transposase of IS4/5 family (DUF4096) ALIDE2_RS07230 PF00691 OmpA family ALIDE2_RS07230 PF13677 Membrane MotB of proton-channel complex MotA/MotB ALIDE2_RS07245 PF00186 Dihydrofolate reductase ALIDE2_RS07250 PF00303 Thymidylate synthase ALIDE2_RS07255 PF01565 FAD binding domain ALIDE2_RS07255 PF02913 FAD linked oxidases, C-terminal domain ALIDE2_RS07265 PF03631 Virulence factor BrkB ALIDE2_RS07275 PF01593 Flavin containing amine oxidoreductase ALIDE2_RS07280 PF00672 HAMP domain ALIDE2_RS07280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS07280 PF02203 Tar ligand binding domain homologue ALIDE2_RS07295 PF13533 Biotin-lipoyl like ALIDE2_RS07300 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS07310 PF05697 Bacterial trigger factor protein (TF) ALIDE2_RS07310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE2_RS07310 PF05698 Bacterial trigger factor protein (TF) C-terminus ALIDE2_RS07315 PF00574 Clp protease ALIDE2_RS07320 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE2_RS07320 PF07724 AAA domain (Cdc48 subfamily) ALIDE2_RS07320 PF06689 ClpX C4-type zinc finger ALIDE2_RS07325 PF02190 ATP-dependent protease La (LON) substrate-binding domain ALIDE2_RS07325 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS07325 PF05362 Lon protease (S16) C-terminal proteolytic domain ALIDE2_RS07340 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS07340 PF17932 Tetracyclin repressor-like, C-terminal domain ALIDE2_RS07350 PF01575 MaoC like domain ALIDE2_RS07355 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS07355 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS07355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS07360 PF02515 CoA-transferase family III ALIDE2_RS07365 PF02515 CoA-transferase family III ALIDE2_RS07370 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS07380 PF00881 Nitroreductase family ALIDE2_RS07385 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS07395 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS07405 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS07405 PF00005 ABC transporter ALIDE2_RS07410 PF00005 ABC transporter ALIDE2_RS07415 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS07415 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ALIDE2_RS07430 PF03466 LysR substrate binding domain ALIDE2_RS07430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS07435 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS07440 PF02515 CoA-transferase family III ALIDE2_RS07450 PF02515 CoA-transferase family III ALIDE2_RS07455 PF02515 CoA-transferase family III ALIDE2_RS07460 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS07465 PF02803 Thiolase, C-terminal domain ALIDE2_RS07465 PF00108 Thiolase, N-terminal domain ALIDE2_RS07485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS07485 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS07485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS07495 PF00106 short chain dehydrogenase ALIDE2_RS07500 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS07505 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS07510 PF02515 CoA-transferase family III ALIDE2_RS07525 PF05199 GMC oxidoreductase ALIDE2_RS07525 PF00732 GMC oxidoreductase ALIDE2_RS07530 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS07545 PF09339 IclR helix-turn-helix domain ALIDE2_RS07550 PF09339 IclR helix-turn-helix domain ALIDE2_RS07560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS07560 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS07560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS07565 PF01575 MaoC like domain ALIDE2_RS07575 PF02803 Thiolase, C-terminal domain ALIDE2_RS07575 PF00108 Thiolase, N-terminal domain ALIDE2_RS07580 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS07580 PF00501 AMP-binding enzyme ALIDE2_RS07580 PF16177 Acetyl-coenzyme A synthetase N-terminus ALIDE2_RS07590 PF02515 CoA-transferase family III ALIDE2_RS07600 PF03466 LysR substrate binding domain ALIDE2_RS07600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS07605 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS07605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS07605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS07610 PF01012 Electron transfer flavoprotein domain ALIDE2_RS07615 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE2_RS07615 PF01012 Electron transfer flavoprotein domain ALIDE2_RS07625 PF02515 CoA-transferase family III ALIDE2_RS07630 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE2_RS07640 PF00005 ABC transporter ALIDE2_RS07645 PF00005 ABC transporter ALIDE2_RS07645 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS07650 PF11862 Domain of unknown function (DUF3382) ALIDE2_RS07650 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS07655 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS07660 PF13458 Periplasmic binding protein ALIDE2_RS07665 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS07665 PF00107 Zinc-binding dehydrogenase ALIDE2_RS07670 PF00171 Aldehyde dehydrogenase family ALIDE2_RS07680 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS07690 PF00171 Aldehyde dehydrogenase family ALIDE2_RS07695 PF00171 Aldehyde dehydrogenase family ALIDE2_RS07700 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS07710 PF13609 Gram-negative porin ALIDE2_RS07715 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS07720 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS07725 PF11862 Domain of unknown function (DUF3382) ALIDE2_RS07725 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS07730 PF00005 ABC transporter ALIDE2_RS07730 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS07735 PF00005 ABC transporter ALIDE2_RS07745 PF00501 AMP-binding enzyme ALIDE2_RS07745 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS07750 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS07750 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS07750 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS07760 PF09339 IclR helix-turn-helix domain ALIDE2_RS07785 PF00580 UvrD/REP helicase N-terminal domain ALIDE2_RS07785 PF13361 UvrD-like helicase C-terminal domain ALIDE2_RS07795 PF01527 Transposase ALIDE2_RS07810 PF05598 Transposase domain (DUF772) ALIDE2_RS07810 PF01609 Transposase DDE domain ALIDE2_RS07815 PF01609 Transposase DDE domain ALIDE2_RS07815 PF05598 Transposase domain (DUF772) ALIDE2_RS07835 PF03743 Bacterial conjugation TrbI-like protein ALIDE2_RS07840 PF03524 Conjugal transfer protein ALIDE2_RS07865 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ALIDE2_RS07875 PF04956 TrbC/VIRB2 family ALIDE2_RS07880 PF00437 Type II/IV secretion system protein ALIDE2_RS07890 PF02534 Type IV secretory system Conjugative DNA transfer ALIDE2_RS07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS07900 PF03466 LysR substrate binding domain ALIDE2_RS07905 PF01494 FAD binding domain ALIDE2_RS07910 PF02321 Outer membrane efflux protein ALIDE2_RS07925 PF00005 ABC transporter ALIDE2_RS07930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS07935 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS07950 PF10502 Signal peptidase, peptidase S26 ALIDE2_RS07965 PF13614 AAA domain ALIDE2_RS07995 PF05284 Protein of unknown function (DUF736) ALIDE2_RS08000 PF01022 Bacterial regulatory protein, arsR family ALIDE2_RS08015 PF01758 Sodium Bile acid symporter family ALIDE2_RS08020 PF03960 ArsC family ALIDE2_RS08025 PF03551 Transcriptional regulator PadR-like family ALIDE2_RS08040 PF17762 HTH domain found in ParB protein ALIDE2_RS08040 PF02195 ParB-like nuclease domain ALIDE2_RS08045 PF06067 Domain of unknown function (DUF932) ALIDE2_RS08060 PF04002 RadC-like JAB domain ALIDE2_RS08080 PF01381 Helix-turn-helix ALIDE2_RS08080 PF00145 C-5 cytosine-specific DNA methylase ALIDE2_RS08100 PF08459 UvrC Helix-hairpin-helix N-terminal ALIDE2_RS08100 PF01541 GIY-YIG catalytic domain ALIDE2_RS08105 PF01066 CDP-alcohol phosphatidyltransferase ALIDE2_RS08110 PF00216 Bacterial DNA-binding protein ALIDE2_RS08130 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS08135 PF14535 AMP-binding enzyme C-terminal domain ALIDE2_RS08135 PF00501 AMP-binding enzyme ALIDE2_RS08140 PF01039 Carboxyl transferase domain ALIDE2_RS08145 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS08145 PF00364 Biotin-requiring enzyme ALIDE2_RS08145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS08145 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS08150 PF00682 HMGL-like ALIDE2_RS08155 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS08155 PF00501 AMP-binding enzyme ALIDE2_RS08165 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS08180 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS08185 PF09297 NADH pyrophosphatase zinc ribbon domain ALIDE2_RS08185 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ALIDE2_RS08185 PF00293 NUDIX domain ALIDE2_RS08190 PF01206 Sulfurtransferase TusA ALIDE2_RS08195 PF00483 Nucleotidyl transferase ALIDE2_RS08200 PF10458 Valyl tRNA synthetase tRNA binding arm ALIDE2_RS08200 PF00133 tRNA synthetases class I (I, L, M and V) ALIDE2_RS08200 PF08264 Anticodon-binding domain of tRNA ALIDE2_RS08225 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE2_RS08245 PF03900 Porphobilinogen deaminase, C-terminal domain ALIDE2_RS08245 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ALIDE2_RS08250 PF00311 Phosphoenolpyruvate carboxylase ALIDE2_RS08255 PF05280 Flagellar transcriptional activator (FlhC) ALIDE2_RS08260 PF05247 Flagellar transcriptional activator (FlhD) ALIDE2_RS08265 PF00210 Ferritin-like domain ALIDE2_RS08270 PF10417 C-terminal domain of 1-Cys peroxiredoxin ALIDE2_RS08270 PF00578 AhpC/TSA family ALIDE2_RS08275 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS08275 PF13192 Thioredoxin domain ALIDE2_RS08280 PF00199 Catalase ALIDE2_RS08280 PF06628 Catalase-related immune-responsive ALIDE2_RS08305 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS08310 PF03618 Kinase/pyrophosphorylase ALIDE2_RS08315 PF02896 PEP-utilising enzyme, TIM barrel domain ALIDE2_RS08315 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ALIDE2_RS08315 PF00391 PEP-utilising enzyme, mobile domain ALIDE2_RS08325 PF00474 Sodium:solute symporter family ALIDE2_RS08335 PF12806 Acetyl-CoA dehydrogenase C-terminal like ALIDE2_RS08335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS08335 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS08335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS08350 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS08350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS08350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS08355 PF02515 CoA-transferase family III ALIDE2_RS08360 PF00501 AMP-binding enzyme ALIDE2_RS08360 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS08365 PF00108 Thiolase, N-terminal domain ALIDE2_RS08365 PF02803 Thiolase, C-terminal domain ALIDE2_RS08370 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS08375 PF00106 short chain dehydrogenase ALIDE2_RS08395 PF01132 Elongation factor P (EF-P) OB domain ALIDE2_RS08395 PF09285 Elongation factor P, C-terminal ALIDE2_RS08395 PF08207 Elongation factor P (EF-P) KOW-like domain ALIDE2_RS08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS08405 PF03466 LysR substrate binding domain ALIDE2_RS08410 PF02515 CoA-transferase family III ALIDE2_RS08415 PF00682 HMGL-like ALIDE2_RS08420 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS08425 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS08430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS08430 PF03466 LysR substrate binding domain ALIDE2_RS08435 PF02515 CoA-transferase family III ALIDE2_RS08440 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS08440 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS08440 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS08450 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS08455 PF00005 ABC transporter ALIDE2_RS08460 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS08460 PF07702 UTRA domain ALIDE2_RS08465 PF00221 Aromatic amino acid lyase ALIDE2_RS08470 PF07702 UTRA domain ALIDE2_RS08470 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS08475 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ALIDE2_RS08480 PF01175 Urocanase Rossmann-like domain ALIDE2_RS08480 PF17392 Urocanase C-terminal domain ALIDE2_RS08480 PF17391 Urocanase N-terminal domain ALIDE2_RS08490 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS08495 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS08500 PF00005 ABC transporter ALIDE2_RS08505 PF05962 HutD ALIDE2_RS08510 PF01979 Amidohydrolase family ALIDE2_RS08525 PF01177 Asp/Glu/Hydantoin racemase ALIDE2_RS08535 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE2_RS08540 PF00171 Aldehyde dehydrogenase family ALIDE2_RS08545 PF08666 SAF domain ALIDE2_RS08545 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ALIDE2_RS08550 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS08555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS08555 PF03466 LysR substrate binding domain ALIDE2_RS08560 PF01734 Patatin-like phospholipase ALIDE2_RS08565 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE2_RS08570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS08570 PF03466 LysR substrate binding domain ALIDE2_RS08585 PF00216 Bacterial DNA-binding protein ALIDE2_RS08595 PF03466 LysR substrate binding domain ALIDE2_RS08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS08600 PF00106 short chain dehydrogenase ALIDE2_RS08610 PF00561 alpha/beta hydrolase fold ALIDE2_RS08610 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ALIDE2_RS08615 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS08625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS08630 PF00005 ABC transporter ALIDE2_RS08645 PF02321 Outer membrane efflux protein ALIDE2_RS08650 PF10996 Beta-Casp domain ALIDE2_RS08650 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS08650 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ALIDE2_RS08655 PF11892 Domain of unknown function (DUF3412) ALIDE2_RS08655 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ALIDE2_RS08655 PF03641 Possible lysine decarboxylase ALIDE2_RS08690 PF13614 AAA domain ALIDE2_RS08735 PF01131 DNA topoisomerase ALIDE2_RS08735 PF01751 Toprim domain ALIDE2_RS08800 PF09828 Chromate resistance exported protein ALIDE2_RS08805 PF02417 Chromate transporter ALIDE2_RS08810 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ALIDE2_RS08815 PF13276 HTH-like domain ALIDE2_RS08815 PF00665 Integrase core domain ALIDE2_RS08815 PF13333 Integrase core domain ALIDE2_RS08820 PF01527 Transposase ALIDE2_RS08830 PF09828 Chromate resistance exported protein ALIDE2_RS08840 PF00072 Response regulator receiver domain ALIDE2_RS08840 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS08845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS08845 PF00672 HAMP domain ALIDE2_RS08845 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS08860 PF00005 ABC transporter ALIDE2_RS08930 PF01555 DNA methylase ALIDE2_RS08945 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS08950 PF00176 SNF2 family N-terminal domain ALIDE2_RS08950 PF00271 Helicase conserved C-terminal domain ALIDE2_RS08955 PF12728 Helix-turn-helix domain ALIDE2_RS09010 PF04002 RadC-like JAB domain ALIDE2_RS09085 PF01252 Signal peptidase (SPase) II ALIDE2_RS09090 PF00403 Heavy-metal-associated domain ALIDE2_RS09095 PF13411 MerR HTH family regulatory protein ALIDE2_RS09100 PF13356 Arm DNA-binding domain ALIDE2_RS09100 PF00589 Phage integrase family ALIDE2_RS09100 PF14659 Phage integrase, N-terminal SAM-like domain ALIDE2_RS09110 PF11855 Protein of unknown function (DUF3375) ALIDE2_RS09140 PF01527 Transposase ALIDE2_RS09145 PF13276 HTH-like domain ALIDE2_RS09145 PF00665 Integrase core domain ALIDE2_RS09145 PF13333 Integrase core domain ALIDE2_RS09150 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS09150 PF17932 Tetracyclin repressor-like, C-terminal domain ALIDE2_RS09155 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS09155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS09155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS09160 PF02515 CoA-transferase family III ALIDE2_RS09165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS09165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS09170 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS09170 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS09170 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS09185 PF01614 Bacterial transcriptional regulator ALIDE2_RS09185 PF09339 IclR helix-turn-helix domain ALIDE2_RS09195 PF13380 CoA binding domain ALIDE2_RS09195 PF00583 Acetyltransferase (GNAT) family ALIDE2_RS09195 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE2_RS09200 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS09205 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS09210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS09210 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS09210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS09215 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS09225 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS09230 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS09235 PF01575 MaoC like domain ALIDE2_RS09255 PF01012 Electron transfer flavoprotein domain ALIDE2_RS09260 PF01012 Electron transfer flavoprotein domain ALIDE2_RS09260 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE2_RS09265 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS09270 PF03060 Nitronate monooxygenase ALIDE2_RS09275 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS09280 PF00561 alpha/beta hydrolase fold ALIDE2_RS09285 PF02515 CoA-transferase family III ALIDE2_RS09290 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ALIDE2_RS09290 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ALIDE2_RS09300 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS09305 PF02515 CoA-transferase family III ALIDE2_RS09310 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS09310 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS09310 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS09315 PF01575 MaoC like domain ALIDE2_RS09325 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS09330 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS09335 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS09340 PF09339 IclR helix-turn-helix domain ALIDE2_RS09345 PF09339 IclR helix-turn-helix domain ALIDE2_RS09345 PF01614 Bacterial transcriptional regulator ALIDE2_RS09350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS09350 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS09350 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS09350 PF00364 Biotin-requiring enzyme ALIDE2_RS09355 PF01039 Carboxyl transferase domain ALIDE2_RS09375 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS09375 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS09375 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS09380 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS09385 PF01695 IstB-like ATP binding protein ALIDE2_RS09390 PF00665 Integrase core domain ALIDE2_RS09405 PF01131 DNA topoisomerase ALIDE2_RS09405 PF01751 Toprim domain ALIDE2_RS09410 PF03960 ArsC family ALIDE2_RS09415 PF01758 Sodium Bile acid symporter family ALIDE2_RS09425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE2_RS09430 PF01022 Bacterial regulatory protein, arsR family ALIDE2_RS09490 PF06067 Domain of unknown function (DUF932) ALIDE2_RS09605 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS09610 PF13533 Biotin-lipoyl like ALIDE2_RS09620 PF00005 ABC transporter ALIDE2_RS09620 PF12704 MacB-like periplasmic core domain ALIDE2_RS09620 PF02687 FtsX-like permease family ALIDE2_RS09660 PF00005 ABC transporter ALIDE2_RS09660 PF00664 ABC transporter transmembrane region ALIDE2_RS09665 PF00005 ABC transporter ALIDE2_RS09665 PF00664 ABC transporter transmembrane region ALIDE2_RS09685 PF09828 Chromate resistance exported protein ALIDE2_RS09690 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ALIDE2_RS09695 PF02417 Chromate transporter ALIDE2_RS09700 PF09828 Chromate resistance exported protein ALIDE2_RS09705 PF00239 Resolvase, N terminal domain ALIDE2_RS09705 PF02796 Helix-turn-helix domain of resolvase ALIDE2_RS09715 PF05052 MerE protein ALIDE2_RS09720 PF13411 MerR HTH family regulatory protein ALIDE2_RS09725 PF00403 Heavy-metal-associated domain ALIDE2_RS09725 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS09725 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE2_RS09730 PF03203 MerC mercury resistance protein ALIDE2_RS09735 PF00403 Heavy-metal-associated domain ALIDE2_RS09740 PF02411 MerT mercuric transport protein ALIDE2_RS09745 PF00376 MerR family regulatory protein ALIDE2_RS09745 PF09278 MerR, DNA binding ALIDE2_RS09750 PF00239 Resolvase, N terminal domain ALIDE2_RS09750 PF02796 Helix-turn-helix domain of resolvase ALIDE2_RS09790 PF11663 Toxin with endonuclease activity, of toxin-antitoxin system ALIDE2_RS09815 PF00589 Phage integrase family ALIDE2_RS09815 PF13356 Arm DNA-binding domain ALIDE2_RS09815 PF14659 Phage integrase, N-terminal SAM-like domain ALIDE2_RS09825 PF02082 Transcriptional regulator ALIDE2_RS09840 PF02666 Phosphatidylserine decarboxylase ALIDE2_RS09845 PF00005 ABC transporter ALIDE2_RS09845 PF00571 CBS domain ALIDE2_RS09850 PF01176 Translation initiation factor 1A / IF-1 ALIDE2_RS09860 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS09870 PF00216 Bacterial DNA-binding protein ALIDE2_RS09875 PF00575 S1 RNA binding domain ALIDE2_RS09880 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ALIDE2_RS09885 PF02153 Prephenate dehydrogenase ALIDE2_RS09890 PF00800 Prephenate dehydratase ALIDE2_RS09890 PF01817 Chorismate mutase type II ALIDE2_RS09890 PF01842 ACT domain ALIDE2_RS09895 PF00266 Aminotransferase class-V ALIDE2_RS09900 PF03989 DNA gyrase C-terminal domain, beta-propeller ALIDE2_RS09900 PF00521 DNA gyrase/topoisomerase IV, subunit A ALIDE2_RS09905 PF00691 OmpA family ALIDE2_RS09915 PF13419 Haloacid dehalogenase-like hydrolase ALIDE2_RS09920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS09920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS09925 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS09950 PF02796 Helix-turn-helix domain of resolvase ALIDE2_RS09950 PF00239 Resolvase, N terminal domain ALIDE2_RS10045 PF01555 DNA methylase ALIDE2_RS10050 PF02195 ParB-like nuclease domain ALIDE2_RS10100 PF01343 Peptidase family S49 ALIDE2_RS10225 PF18766 SWI2/SNF2 ATPase ALIDE2_RS10225 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ALIDE2_RS10225 PF11867 Domain of unknown function (DUF3387) ALIDE2_RS10235 PF02384 N-6 DNA Methylase ALIDE2_RS10235 PF12161 HsdM N-terminal domain ALIDE2_RS10255 PF13180 PDZ domain ALIDE2_RS10260 PF01435 Peptidase family M48 ALIDE2_RS10270 PF00085 Thioredoxin ALIDE2_RS10275 PF01434 Peptidase family M41 ALIDE2_RS10275 PF17862 AAA+ lid domain ALIDE2_RS10275 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS10280 PF13091 PLD-like domain ALIDE2_RS10285 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE2_RS10285 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS10285 PF17871 AAA lid domain ALIDE2_RS10285 PF02861 Clp amino terminal domain, pathogenicity island component ALIDE2_RS10285 PF07724 AAA domain (Cdc48 subfamily) ALIDE2_RS10290 PF00011 Hsp20/alpha crystallin family ALIDE2_RS10295 PF12728 Helix-turn-helix domain ALIDE2_RS10305 PF00717 Peptidase S24-like ALIDE2_RS10310 PF11799 impB/mucB/samB family C-terminal domain ALIDE2_RS10310 PF00817 impB/mucB/samB family ALIDE2_RS10310 PF13438 Domain of unknown function (DUF4113) ALIDE2_RS10325 PF00239 Resolvase, N terminal domain ALIDE2_RS10325 PF02796 Helix-turn-helix domain of resolvase ALIDE2_RS10350 PF01527 Transposase ALIDE2_RS10355 PF13333 Integrase core domain ALIDE2_RS10355 PF13276 HTH-like domain ALIDE2_RS10355 PF00665 Integrase core domain ALIDE2_RS10360 PF04960 Glutaminase ALIDE2_RS10365 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS10365 PF07687 Peptidase dimerisation domain ALIDE2_RS10370 PF07690 Major Facilitator Superfamily ALIDE2_RS10375 PF03466 LysR substrate binding domain ALIDE2_RS10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS10410 PF00107 Zinc-binding dehydrogenase ALIDE2_RS10410 PF16884 N-terminal domain of oxidoreductase ALIDE2_RS10425 PF07690 Major Facilitator Superfamily ALIDE2_RS10430 PF00875 DNA photolyase ALIDE2_RS10430 PF03441 FAD binding domain of DNA photolyase ALIDE2_RS10440 PF01717 Cobalamin-independent synthase, Catalytic domain ALIDE2_RS10440 PF08267 Cobalamin-independent synthase, N-terminal domain ALIDE2_RS10445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS10445 PF03466 LysR substrate binding domain ALIDE2_RS10470 PF04303 PrpF protein ALIDE2_RS10475 PF00330 Aconitase family (aconitate hydratase) ALIDE2_RS10475 PF00694 Aconitase C-terminal domain ALIDE2_RS10480 PF00285 Citrate synthase, C-terminal domain ALIDE2_RS10490 PF09856 Predicted transcriptional regulator (DUF2083) ALIDE2_RS10490 PF01381 Helix-turn-helix ALIDE2_RS10490 PF06114 IrrE N-terminal-like domain ALIDE2_RS10500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE2_RS10510 PF01479 S4 domain ALIDE2_RS10515 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS10520 PF00072 Response regulator receiver domain ALIDE2_RS10520 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS10525 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS10535 PF01970 Tripartite tricarboxylate transporter TctA family ALIDE2_RS10540 PF10605 3HB-oligomer hydrolase (3HBOH) ALIDE2_RS10560 PF00762 Ferrochelatase ALIDE2_RS10565 PF13419 Haloacid dehalogenase-like hydrolase ALIDE2_RS10570 PF00690 Cation transporter/ATPase, N-terminus ALIDE2_RS10570 PF00689 Cation transporting ATPase, C-terminus ALIDE2_RS10575 PF12697 Alpha/beta hydrolase family ALIDE2_RS10580 PF01053 Cys/Met metabolism PLP-dependent enzyme ALIDE2_RS10590 PF01264 Chorismate synthase ALIDE2_RS10595 PF03477 ATP cone domain ALIDE2_RS10600 PF00464 Serine hydroxymethyltransferase ALIDE2_RS10605 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ALIDE2_RS10605 PF01464 Transglycosylase SLT domain ALIDE2_RS10630 PF17876 Cold shock domain ALIDE2_RS10630 PF08461 Ribonuclease R winged-helix domain ALIDE2_RS10630 PF08206 Ribonuclease B OB domain ALIDE2_RS10630 PF00575 S1 RNA binding domain ALIDE2_RS10630 PF00773 RNB domain ALIDE2_RS10645 PF00034 Cytochrome c ALIDE2_RS10645 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ALIDE2_RS10645 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS10650 PF00085 Thioredoxin ALIDE2_RS10655 PF02576 RimP N-terminal domain ALIDE2_RS10660 PF00575 S1 RNA binding domain ALIDE2_RS10660 PF13184 NusA-like KH domain ALIDE2_RS10660 PF08529 NusA N-terminal domain ALIDE2_RS10665 PF04760 Translation initiation factor IF-2, N-terminal region ALIDE2_RS10665 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS10665 PF11987 Translation-initiation factor 2 ALIDE2_RS10665 PF08364 Bacterial translation initiation factor IF-2 associated region ALIDE2_RS10670 PF02033 Ribosome-binding factor A ALIDE2_RS10675 PF01509 TruB family pseudouridylate synthase (N terminal domain) ALIDE2_RS10675 PF16198 tRNA pseudouridylate synthase B C-terminal domain ALIDE2_RS10680 PF03144 Elongation factor Tu domain 2 ALIDE2_RS10680 PF00679 Elongation factor G C-terminus ALIDE2_RS10680 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS10690 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS10700 PF04542 Sigma-70 region 2 ALIDE2_RS10700 PF08281 Sigma-70, region 4 ALIDE2_RS10710 PF01668 SmpB protein ALIDE2_RS10715 PF03364 Polyketide cyclase / dehydrase and lipid transport ALIDE2_RS10720 PF03658 RnfH family Ubiquitin ALIDE2_RS10730 PF00478 IMP dehydrogenase / GMP reductase domain ALIDE2_RS10730 PF00571 CBS domain ALIDE2_RS10735 PF02540 NAD synthase ALIDE2_RS10735 PF00958 GMP synthase C terminal domain ALIDE2_RS10735 PF00117 Glutamine amidotransferase class-I ALIDE2_RS10740 PF00665 Integrase core domain ALIDE2_RS10745 PF01695 IstB-like ATP binding protein ALIDE2_RS10750 PF00589 Phage integrase family ALIDE2_RS10765 PF06067 Domain of unknown function (DUF932) ALIDE2_RS10770 PF02195 ParB-like nuclease domain ALIDE2_RS10785 PF00403 Heavy-metal-associated domain ALIDE2_RS10795 PF00376 MerR family regulatory protein ALIDE2_RS10795 PF09278 MerR, DNA binding ALIDE2_RS10805 PF05284 Protein of unknown function (DUF736) ALIDE2_RS10820 PF01527 Transposase ALIDE2_RS10825 PF00665 Integrase core domain ALIDE2_RS10825 PF13276 HTH-like domain ALIDE2_RS10825 PF13333 Integrase core domain ALIDE2_RS10845 PF13614 AAA domain ALIDE2_RS10860 PF10502 Signal peptidase, peptidase S26 ALIDE2_RS10870 PF07731 Multicopper oxidase ALIDE2_RS10870 PF07732 Multicopper oxidase ALIDE2_RS10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS10880 PF00672 HAMP domain ALIDE2_RS10880 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS10885 PF00072 Response regulator receiver domain ALIDE2_RS10885 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS10890 PF07732 Multicopper oxidase ALIDE2_RS10890 PF00394 Multicopper oxidase ALIDE2_RS10890 PF07731 Multicopper oxidase ALIDE2_RS10895 PF05275 Copper resistance protein B precursor (CopB) ALIDE2_RS10925 PF11339 Protein of unknown function (DUF3141) ALIDE2_RS10930 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS10930 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ALIDE2_RS10955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS10960 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS10965 PF03466 LysR substrate binding domain ALIDE2_RS10965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS10970 PF01695 IstB-like ATP binding protein ALIDE2_RS10975 PF00665 Integrase core domain ALIDE2_RS10985 PF13356 Arm DNA-binding domain ALIDE2_RS10985 PF00589 Phage integrase family ALIDE2_RS10990 PF00285 Citrate synthase, C-terminal domain ALIDE2_RS10995 PF03937 Flavinator of succinate dehydrogenase ALIDE2_RS11000 PF13085 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS11005 PF02910 Fumarate reductase flavoprotein C-term ALIDE2_RS11005 PF00890 FAD binding domain ALIDE2_RS11010 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ALIDE2_RS11015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ALIDE2_RS11020 PF07702 UTRA domain ALIDE2_RS11020 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS11025 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ALIDE2_RS11025 PF00056 lactate/malate dehydrogenase, NAD binding domain ALIDE2_RS11040 PF06434 Aconitate hydratase 2 N-terminus ALIDE2_RS11040 PF11791 Aconitate B N-terminal domain ALIDE2_RS11040 PF00330 Aconitase family (aconitate hydratase) ALIDE2_RS11050 PF03466 LysR substrate binding domain ALIDE2_RS11050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS11055 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS11055 PF18158 Adaptive response protein AidB N-terminal domain ALIDE2_RS11055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS11060 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS11065 PF02515 CoA-transferase family III ALIDE2_RS11070 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE2_RS11070 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS11075 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS11075 PF01799 [2Fe-2S] binding domain ALIDE2_RS11080 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ALIDE2_RS11080 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ALIDE2_RS11085 PF00941 FAD binding domain in molybdopterin dehydrogenase ALIDE2_RS11085 PF03450 CO dehydrogenase flavoprotein C-terminal domain ALIDE2_RS11090 PF05362 Lon protease (S16) C-terminal proteolytic domain ALIDE2_RS11090 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS11090 PF02190 ATP-dependent protease La (LON) substrate-binding domain ALIDE2_RS11105 PF02625 XdhC and CoxI family ALIDE2_RS11105 PF13478 XdhC Rossmann domain ALIDE2_RS11110 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE2_RS11110 PF12804 MobA-like NTP transferase domain ALIDE2_RS11125 PF01593 Flavin containing amine oxidoreductase ALIDE2_RS11135 PF00535 Glycosyl transferase family 2 ALIDE2_RS11140 PF16325 Peptidase family U32 C-terminal domain ALIDE2_RS11140 PF01136 Peptidase family U32 ALIDE2_RS11160 PF05598 Transposase domain (DUF772) ALIDE2_RS11170 PF00072 Response regulator receiver domain ALIDE2_RS11175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS11175 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS11185 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ALIDE2_RS11190 PF00510 Cytochrome c oxidase subunit III ALIDE2_RS11195 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE2_RS11200 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALIDE2_RS11200 PF06481 COX Aromatic Rich Motif ALIDE2_RS11205 PF07690 Major Facilitator Superfamily ALIDE2_RS11205 PF00083 Sugar (and other) transporter ALIDE2_RS11215 PF02472 Biopolymer transport protein ExbD/TolR ALIDE2_RS11220 PF01618 MotA/TolQ/ExbB proton channel family ALIDE2_RS11225 PF03061 Thioesterase superfamily ALIDE2_RS11230 PF00155 Aminotransferase class I and II ALIDE2_RS11235 PF01029 NusB family ALIDE2_RS11240 PF00885 6,7-dimethyl-8-ribityllumazine synthase ALIDE2_RS11245 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ALIDE2_RS11245 PF00925 GTP cyclohydrolase II ALIDE2_RS11260 PF00106 short chain dehydrogenase ALIDE2_RS11265 PF04262 Glutamate-cysteine ligase ALIDE2_RS11270 PF12805 FUSC-like inner membrane protein yccS ALIDE2_RS11280 PF01042 Endoribonuclease L-PSP ALIDE2_RS11285 PF04324 BFD-like [2Fe-2S] binding domain ALIDE2_RS11285 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS11295 PF01266 FAD dependent oxidoreductase ALIDE2_RS11300 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS11305 PF03466 LysR substrate binding domain ALIDE2_RS11305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS11310 PF01926 50S ribosome-binding GTPase ALIDE2_RS11320 PF00849 RNA pseudouridylate synthase ALIDE2_RS11340 PF00565 Staphylococcal nuclease homologue ALIDE2_RS11345 PF00892 EamA-like transporter family ALIDE2_RS11350 PF00849 RNA pseudouridylate synthase ALIDE2_RS11360 PF00206 Lyase ALIDE2_RS11360 PF10415 Fumarase C C-terminus ALIDE2_RS11375 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ALIDE2_RS11375 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALIDE2_RS11385 PF01220 Dehydroquinase class II ALIDE2_RS11395 PF00472 RF-1 domain ALIDE2_RS11400 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase ALIDE2_RS11405 PF02230 Phospholipase/Carboxylesterase ALIDE2_RS11415 PF01037 Lrp/AsnC ligand binding domain ALIDE2_RS11420 PF17831 Pyruvate dehydrogenase E1 component middle domain ALIDE2_RS11420 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE2_RS11425 PF01425 Amidase ALIDE2_RS11430 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS11435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS11435 PF03466 LysR substrate binding domain ALIDE2_RS11440 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS11440 PF07729 FCD domain ALIDE2_RS11445 PF07690 Major Facilitator Superfamily ALIDE2_RS11450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE2_RS11450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE2_RS11455 PF01370 NAD dependent epimerase/dehydratase family ALIDE2_RS11460 PF07005 Sugar-binding N-terminal domain ALIDE2_RS11460 PF17042 Nucleotide-binding C-terminal domain ALIDE2_RS11465 PF00596 Class II Aldolase and Adducin N-terminal domain ALIDE2_RS11470 PF01261 Xylose isomerase-like TIM barrel ALIDE2_RS11475 PF06167 Glucose-regulated metallo-peptidase M90 ALIDE2_RS11480 PF00149 Calcineurin-like phosphoesterase ALIDE2_RS11485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALIDE2_RS11490 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ALIDE2_RS11505 PF01406 tRNA synthetases class I (C) catalytic domain ALIDE2_RS11505 PF09190 DALR domain ALIDE2_RS11515 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ALIDE2_RS11520 PF01171 PP-loop family ALIDE2_RS11520 PF09179 TilS substrate binding domain ALIDE2_RS11525 PF00696 Amino acid kinase family ALIDE2_RS11525 PF13840 ACT domain ALIDE2_RS11525 PF01842 ACT domain ALIDE2_RS11530 PF00654 Voltage gated chloride channel ALIDE2_RS11540 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS11555 PF00005 ABC transporter ALIDE2_RS11560 PF13406 Transglycosylase SLT domain ALIDE2_RS11565 PF00929 Exonuclease ALIDE2_RS11565 PF08411 Exonuclease C-terminal ALIDE2_RS11570 PF02146 Sir2 family ALIDE2_RS11575 PF01594 AI-2E family transporter ALIDE2_RS11580 PF13302 Acetyltransferase (GNAT) domain ALIDE2_RS11590 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS11595 PF01709 Transcriptional regulator ALIDE2_RS11605 PF13746 4Fe-4S dicluster domain ALIDE2_RS11605 PF12801 4Fe-4S binding domain ALIDE2_RS11605 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ALIDE2_RS11610 PF01654 Cytochrome bd terminal oxidase subunit I ALIDE2_RS11615 PF02322 Cytochrome bd terminal oxidase subunit II ALIDE2_RS11625 PF04172 LrgB-like family ALIDE2_RS11635 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS11635 PF00155 Aminotransferase class I and II ALIDE2_RS11640 PF02798 Glutathione S-transferase, N-terminal domain ALIDE2_RS11640 PF00043 Glutathione S-transferase, C-terminal domain ALIDE2_RS11645 PF05872 Bacterial protein of unknown function (DUF853) ALIDE2_RS11650 PF01709 Transcriptional regulator ALIDE2_RS11655 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ALIDE2_RS11655 PF02843 Phosphoribosylglycinamide synthetase, C domain ALIDE2_RS11655 PF02844 Phosphoribosylglycinamide synthetase, N domain ALIDE2_RS11660 PF01218 Coproporphyrinogen III oxidase ALIDE2_RS11670 PF02590 Predicted SPOUT methyltransferase ALIDE2_RS11675 PF02545 Maf-like protein ALIDE2_RS11690 PF04055 Radical SAM superfamily ALIDE2_RS11690 PF13186 Iron-sulfur cluster-binding domain ALIDE2_RS11695 PF17805 AsnC-like ligand binding domain ALIDE2_RS11700 PF17805 AsnC-like ligand binding domain ALIDE2_RS11700 PF13404 AsnC-type helix-turn-helix domain ALIDE2_RS11710 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS11715 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS11720 PF10414 Sirohaem synthase dimerisation region ALIDE2_RS11720 PF14824 Sirohaem biosynthesis protein central ALIDE2_RS11720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALIDE2_RS11725 PF00575 S1 RNA binding domain ALIDE2_RS11725 PF10150 Ribonuclease E/G family ALIDE2_RS11730 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS11730 PF05230 MASE2 domain ALIDE2_RS11735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS11735 PF03466 LysR substrate binding domain ALIDE2_RS11740 PF00155 Aminotransferase class I and II ALIDE2_RS11745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS11745 PF03466 LysR substrate binding domain ALIDE2_RS11765 PF00883 Cytosol aminopeptidase family, catalytic domain ALIDE2_RS11765 PF02789 Cytosol aminopeptidase family, N-terminal domain ALIDE2_RS11780 PF13458 Periplasmic binding protein ALIDE2_RS11785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS11785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS11815 PF00582 Universal stress protein family ALIDE2_RS11820 PF01814 Hemerythrin HHE cation binding domain ALIDE2_RS11825 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS11830 PF02803 Thiolase, C-terminal domain ALIDE2_RS11830 PF00108 Thiolase, N-terminal domain ALIDE2_RS11835 PF00106 short chain dehydrogenase ALIDE2_RS11840 PF00849 RNA pseudouridylate synthase ALIDE2_RS11845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS11845 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS11845 PF08448 PAS fold ALIDE2_RS11845 PF00072 Response regulator receiver domain ALIDE2_RS11845 PF13188 PAS domain ALIDE2_RS11850 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE2_RS11850 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ALIDE2_RS11855 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS11855 PF00072 Response regulator receiver domain ALIDE2_RS11870 PF08534 Redoxin ALIDE2_RS11895 PF04542 Sigma-70 region 2 ALIDE2_RS11895 PF08281 Sigma-70, region 4 ALIDE2_RS11905 PF05958 tRNA (Uracil-5-)-methyltransferase ALIDE2_RS11910 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS11915 PF09186 Domain of unknown function (DUF1949) ALIDE2_RS11915 PF01205 Uncharacterized protein family UPF0029 ALIDE2_RS11920 PF00127 Copper binding proteins, plastocyanin/azurin family ALIDE2_RS11925 PF11842 Domain of unknown function (DUF3362) ALIDE2_RS11925 PF04055 Radical SAM superfamily ALIDE2_RS11925 PF08497 Radical SAM N-terminal ALIDE2_RS11930 PF00155 Aminotransferase class I and II ALIDE2_RS11935 PF00271 Helicase conserved C-terminal domain ALIDE2_RS11935 PF17757 UvrB interaction domain ALIDE2_RS11935 PF02151 UvrB/uvrC motif ALIDE2_RS11935 PF12344 Ultra-violet resistance protein B ALIDE2_RS11935 PF04851 Type III restriction enzyme, res subunit ALIDE2_RS11940 PF02082 Transcriptional regulator ALIDE2_RS11945 PF00266 Aminotransferase class-V ALIDE2_RS11950 PF01592 NifU-like N terminal domain ALIDE2_RS11955 PF01521 Iron-sulphur cluster biosynthesis ALIDE2_RS11960 PF07743 HSCB C-terminal oligomerisation domain ALIDE2_RS11965 PF00012 Hsp70 protein ALIDE2_RS11970 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS11975 PF00929 Exonuclease ALIDE2_RS11990 PF01266 FAD dependent oxidoreductase ALIDE2_RS12010 PF01180 Dihydroorotate dehydrogenase ALIDE2_RS12015 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ALIDE2_RS12025 PF01432 Peptidase family M3 ALIDE2_RS12030 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ALIDE2_RS12030 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ALIDE2_RS12035 PF00072 Response regulator receiver domain ALIDE2_RS12035 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS12040 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS12040 PF00989 PAS fold ALIDE2_RS12045 PF17831 Pyruvate dehydrogenase E1 component middle domain ALIDE2_RS12045 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE2_RS12050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE2_RS12050 PF00364 Biotin-requiring enzyme ALIDE2_RS12050 PF02817 e3 binding domain ALIDE2_RS12055 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS12055 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE2_RS12075 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS12085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS12085 PF03466 LysR substrate binding domain ALIDE2_RS12090 PF13683 Integrase core domain ALIDE2_RS12090 PF13276 HTH-like domain ALIDE2_RS12105 PF03050 Transposase IS66 family ALIDE2_RS12105 PF13817 IS66 C-terminal element ALIDE2_RS12105 PF13007 Transposase C of IS166 homeodomain ALIDE2_RS12105 PF13005 zinc-finger binding domain of transposase IS66 ALIDE2_RS12110 PF01527 Transposase ALIDE2_RS12115 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS12130 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE2_RS12130 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE2_RS12150 PF00877 NlpC/P60 family ALIDE2_RS12155 PF00324 Amino acid permease ALIDE2_RS12160 PF07690 Major Facilitator Superfamily ALIDE2_RS12165 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS12165 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS12165 PF00563 EAL domain ALIDE2_RS12170 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ALIDE2_RS12180 PF02463 RecF/RecN/SMC N terminal domain ALIDE2_RS12180 PF06470 SMC proteins Flexible Hinge Domain ALIDE2_RS12190 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ALIDE2_RS12190 PF01653 NAD-dependent DNA ligase adenylation domain ALIDE2_RS12190 PF03120 NAD-dependent DNA ligase OB-fold domain ALIDE2_RS12190 PF00533 BRCA1 C Terminus (BRCT) domain ALIDE2_RS12190 PF12826 Helix-hairpin-helix motif ALIDE2_RS12195 PF01734 Patatin-like phospholipase ALIDE2_RS12200 PF17092 Penicillin-binding protein OB-like domain ALIDE2_RS12200 PF00912 Transglycosylase ALIDE2_RS12200 PF00905 Penicillin binding protein transpeptidase domain ALIDE2_RS12205 PF07690 Major Facilitator Superfamily ALIDE2_RS12215 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE2_RS12220 PF13417 Glutathione S-transferase, N-terminal domain ALIDE2_RS12225 PF02578 Multi-copper polyphenol oxidoreductase laccase ALIDE2_RS12235 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ALIDE2_RS12240 PF02803 Thiolase, C-terminal domain ALIDE2_RS12240 PF00108 Thiolase, N-terminal domain ALIDE2_RS12245 PF00106 short chain dehydrogenase ALIDE2_RS12250 PF00005 ABC transporter ALIDE2_RS12250 PF12848 ABC transporter ALIDE2_RS12255 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS12260 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS12260 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS12260 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS12265 PF00501 AMP-binding enzyme ALIDE2_RS12265 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS12270 PF03466 LysR substrate binding domain ALIDE2_RS12270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS12275 PF05175 Methyltransferase small domain ALIDE2_RS12280 PF07687 Peptidase dimerisation domain ALIDE2_RS12280 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS12285 PF00437 Type II/IV secretion system protein ALIDE2_RS12290 PF14602 Hexapeptide repeat of succinyl-transferase ALIDE2_RS12290 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal ALIDE2_RS12295 PF00155 Aminotransferase class I and II ALIDE2_RS12300 PF04060 Putative Fe-S cluster ALIDE2_RS12315 PF01207 Dihydrouridine synthase (Dus) ALIDE2_RS12325 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS12335 PF00501 AMP-binding enzyme ALIDE2_RS12340 PF07729 FCD domain ALIDE2_RS12340 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS12345 PF00682 HMGL-like ALIDE2_RS12350 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS12355 PF02515 CoA-transferase family III ALIDE2_RS12360 PF06114 IrrE N-terminal-like domain ALIDE2_RS12360 PF01381 Helix-turn-helix ALIDE2_RS12360 PF09856 Predicted transcriptional regulator (DUF2083) ALIDE2_RS12365 PF02310 B12 binding domain ALIDE2_RS12365 PF01642 Methylmalonyl-CoA mutase ALIDE2_RS12375 PF01039 Carboxyl transferase domain ALIDE2_RS12380 PF18140 Propionyl-coenzyme A carboxylase BT domain ALIDE2_RS12380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS12380 PF00364 Biotin-requiring enzyme ALIDE2_RS12380 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS12380 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS12390 PF04055 Radical SAM superfamily ALIDE2_RS12390 PF06968 Biotin and Thiamin Synthesis associated domain ALIDE2_RS12395 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS12400 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS12400 PF00072 Response regulator receiver domain ALIDE2_RS12405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS12405 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS12405 PF08521 Two-component sensor kinase N-terminal ALIDE2_RS12420 PF00581 Rhodanese-like domain ALIDE2_RS12435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS12440 PF02321 Outer membrane efflux protein ALIDE2_RS12445 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS12455 PF01022 Bacterial regulatory protein, arsR family ALIDE2_RS12465 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE2_RS12475 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS12480 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS12485 PF00356 Bacterial regulatory proteins, lacI family ALIDE2_RS12495 PF00815 Histidinol dehydrogenase ALIDE2_RS12515 PF08019 Phosphoethanolamine transferase EptA/EptB ALIDE2_RS12515 PF00884 Sulfatase ALIDE2_RS12525 PF00072 Response regulator receiver domain ALIDE2_RS12525 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS12530 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS12535 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS12540 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS12545 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS12545 PF00107 Zinc-binding dehydrogenase ALIDE2_RS12550 PF02515 CoA-transferase family III ALIDE2_RS12555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS12555 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS12555 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS12565 PF02515 CoA-transferase family III ALIDE2_RS12585 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS12590 PF00005 ABC transporter ALIDE2_RS12595 PF00158 Sigma-54 interaction domain ALIDE2_RS12595 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS12595 PF01590 GAF domain ALIDE2_RS12600 PF00364 Biotin-requiring enzyme ALIDE2_RS12600 PF00561 alpha/beta hydrolase fold ALIDE2_RS12605 PF05199 GMC oxidoreductase ALIDE2_RS12605 PF00732 GMC oxidoreductase ALIDE2_RS12615 PF03099 Biotin/lipoate A/B protein ligase family ALIDE2_RS12620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE2_RS12620 PF02817 e3 binding domain ALIDE2_RS12620 PF00364 Biotin-requiring enzyme ALIDE2_RS12625 PF02779 Transketolase, pyrimidine binding domain ALIDE2_RS12625 PF00364 Biotin-requiring enzyme ALIDE2_RS12625 PF02780 Transketolase, C-terminal domain ALIDE2_RS12630 PF02780 Transketolase, C-terminal domain ALIDE2_RS12630 PF02779 Transketolase, pyrimidine binding domain ALIDE2_RS12635 PF00676 Dehydrogenase E1 component ALIDE2_RS12640 PF01037 Lrp/AsnC ligand binding domain ALIDE2_RS12645 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE2_RS12655 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALIDE2_RS12655 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ALIDE2_RS12660 PF12706 Beta-lactamase superfamily domain ALIDE2_RS12660 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS12665 PF01571 Aminomethyltransferase folate-binding domain ALIDE2_RS12665 PF08669 Glycine cleavage T-protein C-terminal barrel domain ALIDE2_RS12670 PF01597 Glycine cleavage H-protein ALIDE2_RS12675 PF02347 Glycine cleavage system P-protein ALIDE2_RS12680 PF02583 Metal-sensitive transcriptional repressor ALIDE2_RS12685 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS12685 PF00107 Zinc-binding dehydrogenase ALIDE2_RS12690 PF00756 Putative esterase ALIDE2_RS12705 PF04055 Radical SAM superfamily ALIDE2_RS12710 PF14760 Rnk N-terminus ALIDE2_RS12710 PF01272 Transcription elongation factor, GreA/GreB, C-term ALIDE2_RS12725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS12725 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS12725 PF12806 Acetyl-CoA dehydrogenase C-terminal like ALIDE2_RS12725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS12730 PF01012 Electron transfer flavoprotein domain ALIDE2_RS12730 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE2_RS12735 PF01012 Electron transfer flavoprotein domain ALIDE2_RS12740 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS12745 PF00850 Histone deacetylase domain ALIDE2_RS12750 PF07726 ATPase family associated with various cellular activities (AAA) ALIDE2_RS12750 PF17863 AAA lid domain ALIDE2_RS12760 PF01841 Transglutaminase-like superfamily ALIDE2_RS12760 PF13559 Domain of unknown function (DUF4129) ALIDE2_RS12760 PF11992 Domain of unknown function (DUF3488) ALIDE2_RS12765 PF13406 Transglycosylase SLT domain ALIDE2_RS12770 PF02779 Transketolase, pyrimidine binding domain ALIDE2_RS12770 PF02780 Transketolase, C-terminal domain ALIDE2_RS12775 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE2_RS12780 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALIDE2_RS12790 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ALIDE2_RS12790 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE2_RS12800 PF03466 LysR substrate binding domain ALIDE2_RS12800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS12805 PF02779 Transketolase, pyrimidine binding domain ALIDE2_RS12805 PF02780 Transketolase, C-terminal domain ALIDE2_RS12805 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE2_RS12810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS12810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS12815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS12815 PF03466 LysR substrate binding domain ALIDE2_RS12820 PF03601 Conserved hypothetical protein 698 ALIDE2_RS12825 PF13458 Periplasmic binding protein ALIDE2_RS12835 PF02687 FtsX-like permease family ALIDE2_RS12835 PF00005 ABC transporter ALIDE2_RS12835 PF12704 MacB-like periplasmic core domain ALIDE2_RS12840 PF12704 MacB-like periplasmic core domain ALIDE2_RS12840 PF02687 FtsX-like permease family ALIDE2_RS12840 PF00005 ABC transporter ALIDE2_RS12845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS12850 PF02321 Outer membrane efflux protein ALIDE2_RS12855 PF00814 Glycoprotease family ALIDE2_RS12860 PF00571 CBS domain ALIDE2_RS12860 PF01743 Poly A polymerase head domain ALIDE2_RS12870 PF00529 HlyD membrane-fusion protein of T1SS ALIDE2_RS12870 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS12875 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS12880 PF02321 Outer membrane efflux protein ALIDE2_RS12885 PF04324 BFD-like [2Fe-2S] binding domain ALIDE2_RS12885 PF18267 Rubredoxin NAD+ reductase C-terminal domain ALIDE2_RS12885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ALIDE2_RS12885 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS12885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ALIDE2_RS12890 PF00355 Rieske [2Fe-2S] domain ALIDE2_RS12895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ALIDE2_RS12895 PF04324 BFD-like [2Fe-2S] binding domain ALIDE2_RS12895 PF01568 Molydopterin dinucleotide binding domain ALIDE2_RS12895 PF00384 Molybdopterin oxidoreductase ALIDE2_RS12900 PF07690 Major Facilitator Superfamily ALIDE2_RS12910 PF02885 Glycosyl transferase family, helical bundle domain ALIDE2_RS12910 PF00591 Glycosyl transferase family, a/b domain ALIDE2_RS12915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ALIDE2_RS12920 PF03061 Thioesterase superfamily ALIDE2_RS12940 PF01883 Iron-sulfur cluster assembly protein ALIDE2_RS12945 PF01592 NifU-like N terminal domain ALIDE2_RS12950 PF00266 Aminotransferase class-V ALIDE2_RS12960 PF00005 ABC transporter ALIDE2_RS12965 PF01458 Uncharacterized protein family (UPF0051) ALIDE2_RS12970 PF01165 Ribosomal protein S21 ALIDE2_RS12985 PF01144 Coenzyme A transferase ALIDE2_RS12990 PF01144 Coenzyme A transferase ALIDE2_RS13000 PF01757 Acyltransferase family ALIDE2_RS13005 PF00696 Amino acid kinase family ALIDE2_RS13005 PF00583 Acetyltransferase (GNAT) family ALIDE2_RS13015 PF01266 FAD dependent oxidoreductase ALIDE2_RS13020 PF17645 Arylmalonate decarboxylase ALIDE2_RS13030 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS13040 PF00005 ABC transporter ALIDE2_RS13040 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS13045 PF00005 ABC transporter ALIDE2_RS13050 PF13458 Periplasmic binding protein ALIDE2_RS13055 PF00701 Dihydrodipicolinate synthetase family ALIDE2_RS13065 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS13065 PF07729 FCD domain ALIDE2_RS13070 PF01966 HD domain ALIDE2_RS13075 PF02600 Disulfide bond formation protein DsbB ALIDE2_RS13080 PF12857 TOBE-like domain ALIDE2_RS13080 PF00005 ABC transporter ALIDE2_RS13080 PF17850 CysA C-terminal regulatory domain ALIDE2_RS13085 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS13090 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS13105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS13105 PF03466 LysR substrate binding domain ALIDE2_RS13110 PF02525 Flavodoxin-like fold ALIDE2_RS13115 PF03358 NADPH-dependent FMN reductase ALIDE2_RS13120 PF03180 NLPA lipoprotein ALIDE2_RS13125 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS13130 PF09383 NIL domain ALIDE2_RS13130 PF00005 ABC transporter ALIDE2_RS13140 PF02132 RecR protein ALIDE2_RS13140 PF13662 Toprim domain ALIDE2_RS13145 PF02575 YbaB/EbfC DNA-binding family ALIDE2_RS13150 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ALIDE2_RS13150 PF12169 DNA polymerase III subunits gamma and tau domain III ALIDE2_RS13150 PF12170 DNA polymerase III tau subunit V interacting with alpha ALIDE2_RS13155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS13155 PF03459 TOBE domain ALIDE2_RS13160 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ALIDE2_RS13160 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ALIDE2_RS13165 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS13185 PF00005 ABC transporter ALIDE2_RS13190 PF01032 FecCD transport family ALIDE2_RS13195 PF01497 Periplasmic binding protein ALIDE2_RS13205 PF00593 TonB dependent receptor ALIDE2_RS13205 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS13220 PF02678 Pirin ALIDE2_RS13220 PF05726 Pirin C-terminal cupin domain ALIDE2_RS13225 PF02678 Pirin ALIDE2_RS13225 PF05726 Pirin C-terminal cupin domain ALIDE2_RS13230 PF13361 UvrD-like helicase C-terminal domain ALIDE2_RS13230 PF00580 UvrD/REP helicase N-terminal domain ALIDE2_RS13230 PF12705 PD-(D/E)XK nuclease superfamily ALIDE2_RS13235 PF12705 PD-(D/E)XK nuclease superfamily ALIDE2_RS13240 PF00085 Thioredoxin ALIDE2_RS13245 PF07497 Rho termination factor, RNA-binding domain ALIDE2_RS13245 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALIDE2_RS13245 PF07498 Rho termination factor, N-terminal domain ALIDE2_RS13250 PF01197 Ribosomal protein L31 ALIDE2_RS13260 PF01554 MatE ALIDE2_RS13265 PF00989 PAS fold ALIDE2_RS13265 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS13265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS13265 PF11808 Phosphate regulon sensor protein PhoR ALIDE2_RS13270 PF00072 Response regulator receiver domain ALIDE2_RS13270 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS13275 PF01895 PhoU domain ALIDE2_RS13280 PF00005 ABC transporter ALIDE2_RS13285 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS13290 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS13295 PF12849 PBP superfamily domain ALIDE2_RS13300 PF02541 Ppx/GppA phosphatase family ALIDE2_RS13305 PF00300 Histidine phosphatase superfamily (branch 1) ALIDE2_RS13310 PF02503 Polyphosphate kinase middle domain ALIDE2_RS13310 PF13090 Polyphosphate kinase C-terminal domain 2 ALIDE2_RS13310 PF17941 Polyphosphate kinase C-terminal domain 1 ALIDE2_RS13310 PF13089 Polyphosphate kinase N-terminal domain ALIDE2_RS13320 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS13320 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS13320 PF00563 EAL domain ALIDE2_RS13325 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALIDE2_RS13325 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALIDE2_RS13325 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALIDE2_RS13325 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALIDE2_RS13330 PF00809 Pterin binding enzyme ALIDE2_RS13335 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS13335 PF17862 AAA+ lid domain ALIDE2_RS13335 PF01434 Peptidase family M41 ALIDE2_RS13335 PF06480 FtsH Extracellular ALIDE2_RS13340 PF01728 FtsJ-like methyltransferase ALIDE2_RS13345 PF01985 CRS1 / YhbY (CRM) domain ALIDE2_RS13360 PF03449 Transcription elongation factor, N-terminal ALIDE2_RS13360 PF01272 Transcription elongation factor, GreA/GreB, C-term ALIDE2_RS13365 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS13365 PF02142 MGS-like domain ALIDE2_RS13365 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ALIDE2_RS13370 PF00117 Glutamine amidotransferase class-I ALIDE2_RS13370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ALIDE2_RS13380 PF01527 Transposase ALIDE2_RS13440 PF01527 Transposase ALIDE2_RS13445 PF13683 Integrase core domain ALIDE2_RS13445 PF13276 HTH-like domain ALIDE2_RS13450 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS13470 PF07731 Multicopper oxidase ALIDE2_RS13470 PF07732 Multicopper oxidase ALIDE2_RS13490 PF00871 Acetokinase family ALIDE2_RS13510 PF09363 XFP C-terminal domain ALIDE2_RS13510 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase ALIDE2_RS13510 PF09364 XFP N-terminal domain ALIDE2_RS13525 PF03109 ABC1 family ALIDE2_RS13530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS13530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS13535 PF08241 Methyltransferase domain ALIDE2_RS13550 PF17820 PDZ domain ALIDE2_RS13550 PF13180 PDZ domain ALIDE2_RS13555 PF14572 Phosphoribosyl synthetase-associated domain ALIDE2_RS13555 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ALIDE2_RS13560 PF02885 Glycosyl transferase family, helical bundle domain ALIDE2_RS13560 PF00591 Glycosyl transferase family, a/b domain ALIDE2_RS13560 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ALIDE2_RS13565 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS13565 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ALIDE2_RS13565 PF10996 Beta-Casp domain ALIDE2_RS13575 PF04536 TPM domain ALIDE2_RS13590 PF00403 Heavy-metal-associated domain ALIDE2_RS13595 PF03976 Polyphosphate kinase 2 (PPK2) ALIDE2_RS13605 PF09278 MerR, DNA binding ALIDE2_RS13605 PF00376 MerR family regulatory protein ALIDE2_RS13615 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS13620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS13635 PF13194 Domain of unknown function (DUF4010) ALIDE2_RS13645 PF11339 Protein of unknown function (DUF3141) ALIDE2_RS13650 PF04945 YHS domain ALIDE2_RS13675 PF00072 Response regulator receiver domain ALIDE2_RS13675 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS13680 PF00665 Integrase core domain ALIDE2_RS13680 PF13276 HTH-like domain ALIDE2_RS13680 PF13333 Integrase core domain ALIDE2_RS13685 PF01527 Transposase ALIDE2_RS13785 PF02195 ParB-like nuclease domain ALIDE2_RS13785 PF17762 HTH domain found in ParB protein ALIDE2_RS13885 PF01381 Helix-turn-helix ALIDE2_RS13900 PF01464 Transglycosylase SLT domain ALIDE2_RS13930 PF03743 Bacterial conjugation TrbI-like protein ALIDE2_RS13935 PF10411 Disulfide bond isomerase protein N-terminus ALIDE2_RS13935 PF13098 Thioredoxin-like domain ALIDE2_RS13945 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer ALIDE2_RS13955 PF10502 Signal peptidase, peptidase S26 ALIDE2_RS13970 PF06834 TraU protein ALIDE2_RS14025 PF13411 MerR HTH family regulatory protein ALIDE2_RS14030 PF00216 Bacterial DNA-binding protein ALIDE2_RS14035 PF03147 Ferredoxin-fold anticodon binding domain ALIDE2_RS14035 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ALIDE2_RS14035 PF03483 B3/4 domain ALIDE2_RS14035 PF03484 tRNA synthetase B5 domain ALIDE2_RS14035 PF01588 Putative tRNA binding domain ALIDE2_RS14040 PF01409 tRNA synthetases class II core domain (F) ALIDE2_RS14040 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ALIDE2_RS14045 PF00453 Ribosomal protein L20 ALIDE2_RS14050 PF01632 Ribosomal protein L35 ALIDE2_RS14055 PF05198 Translation initiation factor IF-3, N-terminal domain ALIDE2_RS14055 PF00707 Translation initiation factor IF-3, C-terminal domain ALIDE2_RS14060 PF03129 Anticodon binding domain ALIDE2_RS14060 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALIDE2_RS14060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ALIDE2_RS14060 PF02824 TGS domain ALIDE2_RS14070 PF00463 Isocitrate lyase family ALIDE2_RS14095 PF01618 MotA/TolQ/ExbB proton channel family ALIDE2_RS14100 PF02472 Biopolymer transport protein ExbD/TolR ALIDE2_RS14110 PF03928 Haem-degrading ALIDE2_RS14115 PF01027 Inhibitor of apoptosis-promoting Bax1 ALIDE2_RS14125 PF07690 Major Facilitator Superfamily ALIDE2_RS14135 PF00893 Small Multidrug Resistance protein ALIDE2_RS14140 PF02417 Chromate transporter ALIDE2_RS14150 PF02146 Sir2 family ALIDE2_RS14160 PF07237 Protein of unknown function (DUF1428) ALIDE2_RS14195 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALIDE2_RS14195 PF00588 SpoU rRNA Methylase family ALIDE2_RS14200 PF00375 Sodium:dicarboxylate symporter family ALIDE2_RS14205 PF00005 ABC transporter ALIDE2_RS14210 PF13472 GDSL-like Lipase/Acylhydrolase family ALIDE2_RS14220 PF01053 Cys/Met metabolism PLP-dependent enzyme ALIDE2_RS14230 PF01740 STAS domain ALIDE2_RS14230 PF00916 Sulfate permease family ALIDE2_RS14235 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS14240 PF10609 NUBPL iron-transfer P-loop NTPase ALIDE2_RS14245 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS14245 PF16177 Acetyl-coenzyme A synthetase N-terminus ALIDE2_RS14245 PF00501 AMP-binding enzyme ALIDE2_RS14255 PF07995 Glucose / Sorbosone dehydrogenase ALIDE2_RS14260 PF03466 LysR substrate binding domain ALIDE2_RS14260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS14265 PF00171 Aldehyde dehydrogenase family ALIDE2_RS14275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS14275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS14275 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS14285 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ALIDE2_RS14285 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ALIDE2_RS14300 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS14305 PF04320 Protein with unknown function (DUF469) ALIDE2_RS14310 PF08666 SAF domain ALIDE2_RS14310 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ALIDE2_RS14315 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS14320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ALIDE2_RS14320 PF13378 Enolase C-terminal domain-like ALIDE2_RS14330 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS14335 PF00701 Dihydrodipicolinate synthetase family ALIDE2_RS14340 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS14345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS14345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS14350 PF13378 Enolase C-terminal domain-like ALIDE2_RS14355 PF00171 Aldehyde dehydrogenase family ALIDE2_RS14360 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ALIDE2_RS14365 PF04377 Arginine-tRNA-protein transferase, C terminus ALIDE2_RS14365 PF04376 Arginine-tRNA-protein transferase, N terminus ALIDE2_RS14370 PF02678 Pirin ALIDE2_RS14370 PF17954 Quercetinase C-terminal cupin domain ALIDE2_RS14375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS14375 PF03466 LysR substrate binding domain ALIDE2_RS14380 PF01593 Flavin containing amine oxidoreductase ALIDE2_RS14385 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALIDE2_RS14390 PF02390 Putative methyltransferase ALIDE2_RS14395 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS14400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ALIDE2_RS14400 PF01411 tRNA synthetases class II (A) ALIDE2_RS14400 PF02272 DHHA1 domain ALIDE2_RS14405 PF00701 Dihydrodipicolinate synthetase family ALIDE2_RS14415 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALIDE2_RS14420 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE2_RS14425 PF02615 Malate/L-lactate dehydrogenase ALIDE2_RS14430 PF07729 FCD domain ALIDE2_RS14430 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS14435 PF00849 RNA pseudouridylate synthase ALIDE2_RS14440 PF13380 CoA binding domain ALIDE2_RS14440 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE2_RS14440 PF00583 Acetyltransferase (GNAT) family ALIDE2_RS14445 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ALIDE2_RS14445 PF00534 Glycosyl transferases group 1 ALIDE2_RS14450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ALIDE2_RS14450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ALIDE2_RS14450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ALIDE2_RS14450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ALIDE2_RS14455 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS14460 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS14465 PF04962 KduI/IolB family ALIDE2_RS14470 PF00294 pfkB family carbohydrate kinase ALIDE2_RS14480 PF02805 Metal binding domain of Ada ALIDE2_RS14480 PF12833 Helix-turn-helix domain ALIDE2_RS14485 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ALIDE2_RS14485 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ALIDE2_RS14495 PF00211 Adenylate and Guanylate cyclase catalytic domain ALIDE2_RS14495 PF16701 Adenylate cyclase regulatory domain ALIDE2_RS14500 PF02016 LD-carboxypeptidase N-terminal domain ALIDE2_RS14500 PF17676 LD-carboxypeptidase C-terminal domain ALIDE2_RS14505 PF14437 MafB19-like deaminase ALIDE2_RS14515 PF01136 Peptidase family U32 ALIDE2_RS14515 PF12392 Collagenase ALIDE2_RS14520 PF01053 Cys/Met metabolism PLP-dependent enzyme ALIDE2_RS14525 PF03781 Sulfatase-modifying factor enzyme 1 ALIDE2_RS14525 PF12867 DinB superfamily ALIDE2_RS14530 PF10017 Histidine-specific methyltransferase, SAM-dependent ALIDE2_RS14535 PF03922 OmpW family ALIDE2_RS14540 PF05661 Protein of unknown function (DUF808) ALIDE2_RS14545 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ALIDE2_RS14545 PF02769 AIR synthase related protein, C-terminal domain ALIDE2_RS14545 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ALIDE2_RS14550 PF00557 Metallopeptidase family M24 ALIDE2_RS14555 PF01966 HD domain ALIDE2_RS14555 PF08335 GlnD PII-uridylyltransferase ALIDE2_RS14555 PF01909 Nucleotidyltransferase domain ALIDE2_RS14560 PF00860 Permease family ALIDE2_RS14565 PF01327 Polypeptide deformylase ALIDE2_RS14570 PF04304 Protein of unknown function (DUF454) ALIDE2_RS14595 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE2_RS14605 PF03971 Monomeric isocitrate dehydrogenase ALIDE2_RS14610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ALIDE2_RS14610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ALIDE2_RS14615 PF02601 Exonuclease VII, large subunit ALIDE2_RS14615 PF13742 OB-fold nucleic acid binding domain ALIDE2_RS14620 PF01618 MotA/TolQ/ExbB proton channel family ALIDE2_RS14625 PF02472 Biopolymer transport protein ExbD/TolR ALIDE2_RS14630 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ALIDE2_RS14635 PF03966 Trm112p-like protein ALIDE2_RS14640 PF02348 Cytidylyltransferase ALIDE2_RS14645 PF05191 Adenylate kinase, active site lid ALIDE2_RS14650 PF17763 Glutaminase/Asparaginase C-terminal domain ALIDE2_RS14650 PF00710 Asparaginase, N-terminal ALIDE2_RS14655 PF01726 LexA DNA binding domain ALIDE2_RS14655 PF00717 Peptidase S24-like ALIDE2_RS14665 PF11898 Domain of unknown function (DUF3418) ALIDE2_RS14665 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ALIDE2_RS14665 PF00271 Helicase conserved C-terminal domain ALIDE2_RS14665 PF04408 Helicase associated domain (HA2) ALIDE2_RS14665 PF00270 DEAD/DEAH box helicase ALIDE2_RS14670 PF02803 Thiolase, C-terminal domain ALIDE2_RS14670 PF00108 Thiolase, N-terminal domain ALIDE2_RS14675 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS14675 PF00501 AMP-binding enzyme ALIDE2_RS14680 PF02632 BioY family ALIDE2_RS14690 PF00005 ABC transporter ALIDE2_RS14705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE2_RS14730 PF01695 IstB-like ATP binding protein ALIDE2_RS14735 PF00665 Integrase core domain ALIDE2_RS14740 PF05284 Protein of unknown function (DUF736) ALIDE2_RS14745 PF01381 Helix-turn-helix ALIDE2_RS14770 PF13614 AAA domain ALIDE2_RS14785 PF10502 Signal peptidase, peptidase S26 ALIDE2_RS14795 PF00762 Ferrochelatase ALIDE2_RS14805 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ALIDE2_RS14810 PF00361 Proton-conducting membrane transporter ALIDE2_RS14810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ALIDE2_RS14815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS14815 PF03466 LysR substrate binding domain ALIDE2_RS14820 PF03741 Integral membrane protein TerC family ALIDE2_RS14835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS14835 PF03466 LysR substrate binding domain ALIDE2_RS14840 PF00255 Glutathione peroxidase ALIDE2_RS14845 PF01370 NAD dependent epimerase/dehydratase family ALIDE2_RS14845 PF08338 Domain of unknown function (DUF1731) ALIDE2_RS14855 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ALIDE2_RS14860 PF02469 Fasciclin domain ALIDE2_RS14865 PF00875 DNA photolyase ALIDE2_RS14865 PF03441 FAD binding domain of DNA photolyase ALIDE2_RS14870 PF08212 Lipocalin-like domain ALIDE2_RS14880 PF01593 Flavin containing amine oxidoreductase ALIDE2_RS14910 PF00106 short chain dehydrogenase ALIDE2_RS14925 PF00875 DNA photolyase ALIDE2_RS14925 PF03441 FAD binding domain of DNA photolyase ALIDE2_RS14930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS14930 PF03466 LysR substrate binding domain ALIDE2_RS14935 PF00665 Integrase core domain ALIDE2_RS14940 PF01695 IstB-like ATP binding protein ALIDE2_RS14945 PF17761 DUF1016 N-terminal domain ALIDE2_RS14945 PF06250 YhcG PDDEXK nuclease domain ALIDE2_RS14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS14955 PF03466 LysR substrate binding domain ALIDE2_RS14960 PF01081 KDPG and KHG aldolase ALIDE2_RS14965 PF00920 Dehydratase family ALIDE2_RS14970 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE2_RS14975 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALIDE2_RS14980 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ALIDE2_RS14990 PF00356 Bacterial regulatory proteins, lacI family ALIDE2_RS14990 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ALIDE2_RS14995 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS14995 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE2_RS14995 PF17871 AAA lid domain ALIDE2_RS14995 PF07724 AAA domain (Cdc48 subfamily) ALIDE2_RS14995 PF02861 Clp amino terminal domain, pathogenicity island component ALIDE2_RS15000 PF02617 ATP-dependent Clp protease adaptor protein ClpS ALIDE2_RS15005 PF02811 PHP domain ALIDE2_RS15005 PF14579 Helix-hairpin-helix motif ALIDE2_RS15005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ALIDE2_RS15005 PF07733 Bacterial DNA polymerase III alpha NTPase domain ALIDE2_RS15005 PF01336 OB-fold nucleic acid binding domain ALIDE2_RS15010 PF13525 Outer membrane lipoprotein ALIDE2_RS15015 PF04851 Type III restriction enzyme, res subunit ALIDE2_RS15015 PF13307 Helicase C-terminal domain ALIDE2_RS15030 PF03969 AFG1-like ATPase ALIDE2_RS15035 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS15035 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE2_RS15040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ALIDE2_RS15040 PF02817 e3 binding domain ALIDE2_RS15040 PF00364 Biotin-requiring enzyme ALIDE2_RS15045 PF02779 Transketolase, pyrimidine binding domain ALIDE2_RS15045 PF16870 2-oxoglutarate dehydrogenase C-terminal ALIDE2_RS15045 PF00676 Dehydrogenase E1 component ALIDE2_RS15045 PF16078 2-oxoglutarate dehydrogenase N-terminus ALIDE2_RS15050 PF01594 AI-2E family transporter ALIDE2_RS15055 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS15070 PF03466 LysR substrate binding domain ALIDE2_RS15075 PF00582 Universal stress protein family ALIDE2_RS15080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE2_RS15080 PF00005 ABC transporter ALIDE2_RS15085 PF12911 N-terminal TM domain of oligopeptide transport permease C ALIDE2_RS15085 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS15090 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS15100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE2_RS15110 PF00892 EamA-like transporter family ALIDE2_RS15115 PF04325 Protein of unknown function (DUF465) ALIDE2_RS15120 PF01068 ATP dependent DNA ligase domain ALIDE2_RS15120 PF14743 DNA ligase OB-like domain ALIDE2_RS15125 PF03741 Integral membrane protein TerC family ALIDE2_RS15130 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ALIDE2_RS15130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ALIDE2_RS15130 PF01276 Orn/Lys/Arg decarboxylase, major domain ALIDE2_RS15140 PF01145 SPFH domain / Band 7 family ALIDE2_RS15145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS15145 PF03466 LysR substrate binding domain ALIDE2_RS15150 PF00205 Thiamine pyrophosphate enzyme, central domain ALIDE2_RS15150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALIDE2_RS15150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE2_RS15170 PF13333 Integrase core domain ALIDE2_RS15170 PF00665 Integrase core domain ALIDE2_RS15170 PF13276 HTH-like domain ALIDE2_RS15175 PF01527 Transposase ALIDE2_RS15190 PF13005 zinc-finger binding domain of transposase IS66 ALIDE2_RS15190 PF13007 Transposase C of IS166 homeodomain ALIDE2_RS15190 PF13817 IS66 C-terminal element ALIDE2_RS15190 PF03050 Transposase IS66 family ALIDE2_RS15215 PF09588 YqaJ-like viral recombinase domain ALIDE2_RS15230 PF03104 DNA polymerase family B, exonuclease domain ALIDE2_RS15230 PF00136 DNA polymerase family B ALIDE2_RS15240 PF05930 Prophage CP4-57 regulatory protein (AlpA) ALIDE2_RS15245 PF13356 Arm DNA-binding domain ALIDE2_RS15245 PF00589 Phage integrase family ALIDE2_RS15250 PF01464 Transglycosylase SLT domain ALIDE2_RS15250 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS15275 PF00501 AMP-binding enzyme ALIDE2_RS15275 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS15285 PF00005 ABC transporter ALIDE2_RS15290 PF00005 ABC transporter ALIDE2_RS15290 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS15300 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS15315 PF00108 Thiolase, N-terminal domain ALIDE2_RS15315 PF02803 Thiolase, C-terminal domain ALIDE2_RS15320 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS15320 PF00501 AMP-binding enzyme ALIDE2_RS15340 PF04362 Bacterial Fe(2+) trafficking ALIDE2_RS15345 PF03458 UPF0126 domain ALIDE2_RS15350 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ALIDE2_RS15350 PF01266 FAD dependent oxidoreductase ALIDE2_RS15355 PF01925 Sulfite exporter TauE/SafE ALIDE2_RS15370 PF01507 Phosphoadenosine phosphosulfate reductase family ALIDE2_RS15375 PF01507 Phosphoadenosine phosphosulfate reductase family ALIDE2_RS15380 PF00009 Elongation factor Tu GTP binding domain ALIDE2_RS15385 PF00037 4Fe-4S binding domain ALIDE2_RS15385 PF11953 Domain of unknown function (DUF3470) ALIDE2_RS15390 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS15405 PF08543 Phosphomethylpyrimidine kinase ALIDE2_RS15410 PF01266 FAD dependent oxidoreductase ALIDE2_RS15420 PF05690 Thiazole biosynthesis protein ThiG ALIDE2_RS15425 PF02581 Thiamine monophosphate synthase ALIDE2_RS15435 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS15435 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE2_RS15435 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain ALIDE2_RS15440 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS15445 PF13545 Crp-like helix-turn-helix domain ALIDE2_RS15445 PF00027 Cyclic nucleotide-binding domain ALIDE2_RS15455 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS15455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS15455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS15460 PF00171 Aldehyde dehydrogenase family ALIDE2_RS15460 PF01619 Proline dehydrogenase ALIDE2_RS15460 PF14850 DNA-binding domain of Proline dehydrogenase ALIDE2_RS15460 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ALIDE2_RS15465 PF00474 Sodium:solute symporter family ALIDE2_RS15470 PF01614 Bacterial transcriptional regulator ALIDE2_RS15470 PF09339 IclR helix-turn-helix domain ALIDE2_RS15475 PF00768 D-alanyl-D-alanine carboxypeptidase ALIDE2_RS15480 PF08502 LeuA allosteric (dimerisation) domain ALIDE2_RS15480 PF00682 HMGL-like ALIDE2_RS15485 PF00682 HMGL-like ALIDE2_RS15485 PF08502 LeuA allosteric (dimerisation) domain ALIDE2_RS15490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS15490 PF03466 LysR substrate binding domain ALIDE2_RS15500 PF07690 Major Facilitator Superfamily ALIDE2_RS15510 PF13417 Glutathione S-transferase, N-terminal domain ALIDE2_RS15515 PF01066 CDP-alcohol phosphatidyltransferase ALIDE2_RS15520 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ALIDE2_RS15520 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ALIDE2_RS15525 PF10369 Small subunit of acetolactate synthase ALIDE2_RS15530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ALIDE2_RS15530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ALIDE2_RS15530 PF00205 Thiamine pyrophosphate enzyme, central domain ALIDE2_RS15535 PF04542 Sigma-70 region 2 ALIDE2_RS15535 PF08281 Sigma-70, region 4 ALIDE2_RS15555 PF01219 Prokaryotic diacylglycerol kinase ALIDE2_RS15560 PF03641 Possible lysine decarboxylase ALIDE2_RS15565 PF00543 Nitrogen regulatory protein P-II ALIDE2_RS15570 PF00795 Carbon-nitrogen hydrolase ALIDE2_RS15570 PF02540 NAD synthase ALIDE2_RS15580 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS15580 PF02203 Tar ligand binding domain homologue ALIDE2_RS15580 PF00672 HAMP domain ALIDE2_RS15585 PF01584 CheW-like domain ALIDE2_RS15590 PF00719 Inorganic pyrophosphatase ALIDE2_RS15595 PF03030 Inorganic H+ pyrophosphatase ALIDE2_RS15600 PF00171 Aldehyde dehydrogenase family ALIDE2_RS15615 PF04055 Radical SAM superfamily ALIDE2_RS15615 PF06463 Molybdenum Cofactor Synthesis C ALIDE2_RS15620 PF12804 MobA-like NTP transferase domain ALIDE2_RS15630 PF03453 MoeA N-terminal region (domain I and II) ALIDE2_RS15630 PF00994 Probable molybdopterin binding domain ALIDE2_RS15630 PF03454 MoeA C-terminal region (domain IV) ALIDE2_RS15645 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS15655 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS15660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS15660 PF03466 LysR substrate binding domain ALIDE2_RS15665 PF03737 Aldolase/RraA ALIDE2_RS15665 PF00180 Isocitrate/isopropylmalate dehydrogenase ALIDE2_RS15670 PF03737 Aldolase/RraA ALIDE2_RS15675 PF00155 Aminotransferase class I and II ALIDE2_RS15680 PF00075 RNase H ALIDE2_RS15685 PF08241 Methyltransferase domain ALIDE2_RS15690 PF16123 Hydroxyacylglutathione hydrolase C-terminus ALIDE2_RS15690 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS15695 PF01464 Transglycosylase SLT domain ALIDE2_RS15695 PF01476 LysM domain ALIDE2_RS15705 PF13356 Arm DNA-binding domain ALIDE2_RS15705 PF00589 Phage integrase family ALIDE2_RS15755 PF00899 ThiF family ALIDE2_RS15760 PF13174 Tetratricopeptide repeat ALIDE2_RS15760 PF16331 TolA binding protein trimerisation ALIDE2_RS15765 PF00691 OmpA family ALIDE2_RS15770 PF04052 TolB amino-terminal domain ALIDE2_RS15770 PF07676 WD40-like Beta Propeller Repeat ALIDE2_RS15775 PF00005 ABC transporter ALIDE2_RS15775 PF00664 ABC transporter transmembrane region ALIDE2_RS15780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS15780 PF00364 Biotin-requiring enzyme ALIDE2_RS15780 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS15780 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS15785 PF02682 Carboxyltransferase domain, subdomain C and D ALIDE2_RS15790 PF07286 Protein of unknown function (DUF1445) ALIDE2_RS15795 PF03746 LamB/YcsF family ALIDE2_RS15800 PF07690 Major Facilitator Superfamily ALIDE2_RS15805 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS15805 PF07729 FCD domain ALIDE2_RS15825 PF01026 TatD related DNase ALIDE2_RS15835 PF09115 DNA polymerase III, delta subunit, C terminal ALIDE2_RS15840 PF02223 Thymidylate kinase ALIDE2_RS15845 PF02618 YceG-like family ALIDE2_RS15855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ALIDE2_RS15860 PF07690 Major Facilitator Superfamily ALIDE2_RS15865 PF00072 Response regulator receiver domain ALIDE2_RS15865 PF13426 PAS domain ALIDE2_RS15865 PF08448 PAS fold ALIDE2_RS15865 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS15865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS15870 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS15870 PF00072 Response regulator receiver domain ALIDE2_RS15885 PF07859 alpha/beta hydrolase fold ALIDE2_RS15890 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE2_RS15905 PF04909 Amidohydrolase ALIDE2_RS15910 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS15915 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS15920 PF02515 CoA-transferase family III ALIDE2_RS15930 PF00356 Bacterial regulatory proteins, lacI family ALIDE2_RS15935 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS15940 PF00501 AMP-binding enzyme ALIDE2_RS15940 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS15950 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS15965 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS15970 PF17674 HHH domain ALIDE2_RS15970 PF00575 S1 RNA binding domain ALIDE2_RS15970 PF16921 Tex protein YqgF-like domain ALIDE2_RS15970 PF09371 Tex-like protein N-terminal domain ALIDE2_RS15995 PF01243 Pyridoxamine 5'-phosphate oxidase ALIDE2_RS15995 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ALIDE2_RS16015 PF00593 TonB dependent receptor ALIDE2_RS16015 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS16025 PF01625 Peptide methionine sulfoxide reductase ALIDE2_RS16030 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS16030 PF17922 Tetracyclin repressor-like, C-terminal domain ALIDE2_RS16045 PF02321 Outer membrane efflux protein ALIDE2_RS16075 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS16075 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS16075 PF12806 Acetyl-CoA dehydrogenase C-terminal like ALIDE2_RS16075 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS16080 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS16085 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS16090 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS16095 PF02803 Thiolase, C-terminal domain ALIDE2_RS16095 PF00108 Thiolase, N-terminal domain ALIDE2_RS16100 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS16100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE2_RS16100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS16105 PF00005 ABC transporter ALIDE2_RS16110 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS16110 PF00005 ABC transporter ALIDE2_RS16120 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS16130 PF00501 AMP-binding enzyme ALIDE2_RS16130 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS16135 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ALIDE2_RS16140 PF01641 SelR domain ALIDE2_RS16145 PF04279 Intracellular septation protein A ALIDE2_RS16165 PF18073 Rubredoxin metal binding domain ALIDE2_RS16175 PF13244 Domain of unknown function (DUF4040) ALIDE2_RS16175 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ALIDE2_RS16175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ALIDE2_RS16175 PF00361 Proton-conducting membrane transporter ALIDE2_RS16180 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ALIDE2_RS16185 PF00361 Proton-conducting membrane transporter ALIDE2_RS16195 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ALIDE2_RS16210 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ALIDE2_RS16225 PF02646 RmuC family ALIDE2_RS16230 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS16230 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS16240 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ALIDE2_RS16240 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ALIDE2_RS16250 PF09361 Phasin protein ALIDE2_RS16260 PF00106 short chain dehydrogenase ALIDE2_RS16280 PF13356 Arm DNA-binding domain ALIDE2_RS16280 PF00589 Phage integrase family ALIDE2_RS16345 PF02195 ParB-like nuclease domain ALIDE2_RS16345 PF17762 HTH domain found in ParB protein ALIDE2_RS16560 PF01464 Transglycosylase SLT domain ALIDE2_RS16585 PF03743 Bacterial conjugation TrbI-like protein ALIDE2_RS16590 PF10411 Disulfide bond isomerase protein N-terminus ALIDE2_RS16590 PF13098 Thioredoxin-like domain ALIDE2_RS16600 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer ALIDE2_RS16625 PF06834 TraU protein ALIDE2_RS16685 PF03976 Polyphosphate kinase 2 (PPK2) ALIDE2_RS16690 PF00403 Heavy-metal-associated domain ALIDE2_RS16695 PF07690 Major Facilitator Superfamily ALIDE2_RS16705 PF04536 TPM domain ALIDE2_RS16715 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ALIDE2_RS16715 PF10996 Beta-Casp domain ALIDE2_RS16715 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS16720 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ALIDE2_RS16720 PF00591 Glycosyl transferase family, a/b domain ALIDE2_RS16720 PF02885 Glycosyl transferase family, helical bundle domain ALIDE2_RS16730 PF13180 PDZ domain ALIDE2_RS16735 PF00696 Amino acid kinase family ALIDE2_RS16745 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS16745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ALIDE2_RS16745 PF00403 Heavy-metal-associated domain ALIDE2_RS16750 PF00403 Heavy-metal-associated domain ALIDE2_RS16755 PF02411 MerT mercuric transport protein ALIDE2_RS16760 PF09278 MerR, DNA binding ALIDE2_RS16760 PF00376 MerR family regulatory protein ALIDE2_RS16775 PF02049 Flagellar hook-basal body complex protein FliE ALIDE2_RS16785 PF00665 Integrase core domain ALIDE2_RS16785 PF13276 HTH-like domain ALIDE2_RS16785 PF13333 Integrase core domain ALIDE2_RS16790 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS16795 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS16795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS16795 PF00672 HAMP domain ALIDE2_RS16800 PF01527 Transposase ALIDE2_RS16805 PF00665 Integrase core domain ALIDE2_RS16805 PF13276 HTH-like domain ALIDE2_RS16805 PF13333 Integrase core domain ALIDE2_RS16815 PF01022 Bacterial regulatory protein, arsR family ALIDE2_RS16820 PF01209 ubiE/COQ5 methyltransferase family ALIDE2_RS16830 PF08241 Methyltransferase domain ALIDE2_RS16835 PF02321 Outer membrane efflux protein ALIDE2_RS16840 PF00529 HlyD membrane-fusion protein of T1SS ALIDE2_RS16840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS16845 PF00543 Nitrogen regulatory protein P-II ALIDE2_RS16850 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS16855 PF00403 Heavy-metal-associated domain ALIDE2_RS16860 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS16860 PF00072 Response regulator receiver domain ALIDE2_RS16865 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS16865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS16865 PF00672 HAMP domain ALIDE2_RS16905 PF00749 tRNA synthetases class I (E and Q), catalytic domain ALIDE2_RS16910 PF01053 Cys/Met metabolism PLP-dependent enzyme ALIDE2_RS16915 PF00156 Phosphoribosyl transferase domain ALIDE2_RS16920 PF02674 Colicin V production protein ALIDE2_RS16930 PF02875 Mur ligase family, glutamate ligase domain ALIDE2_RS16930 PF08245 Mur ligase middle domain ALIDE2_RS16935 PF03960 ArsC family ALIDE2_RS16945 PF06865 Pyrimidine/purine nucleoside phosphorylase ALIDE2_RS16950 PF00764 Arginosuccinate synthase ALIDE2_RS16955 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS16955 PF01590 GAF domain ALIDE2_RS16955 PF00158 Sigma-54 interaction domain ALIDE2_RS16960 PF08882 Acetone carboxylase gamma subunit ALIDE2_RS16965 PF02538 Hydantoinase B/oxoprolinase ALIDE2_RS16970 PF01968 Hydantoinase/oxoprolinase ALIDE2_RS16970 PF05378 Hydantoinase/oxoprolinase N-terminal region ALIDE2_RS16975 PF06508 Queuosine biosynthesis protein QueC ALIDE2_RS16980 PF02592 Putative vitamin uptake transporter ALIDE2_RS16990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ALIDE2_RS16990 PF01565 FAD binding domain ALIDE2_RS16995 PF04461 Protein of unknown function (DUF520) ALIDE2_RS17010 PF02660 Glycerol-3-phosphate acyltransferase ALIDE2_RS17015 PF04073 Aminoacyl-tRNA editing domain ALIDE2_RS17020 PF00248 Aldo/keto reductase family ALIDE2_RS17025 PF00005 ABC transporter ALIDE2_RS17025 PF08402 TOBE domain ALIDE2_RS17030 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS17045 PF16654 Diaminopimelic acid dehydrogenase C-terminal domain ALIDE2_RS17045 PF01113 Dihydrodipicolinate reductase, N-terminus ALIDE2_RS17050 PF03462 PCRF domain ALIDE2_RS17050 PF00472 RF-1 domain ALIDE2_RS17055 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ALIDE2_RS17055 PF11940 Domain of unknown function (DUF3458) Ig-like fold ALIDE2_RS17055 PF01433 Peptidase family M1 domain ALIDE2_RS17060 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ALIDE2_RS17070 PF08401 Domain of unknown function (DUF1738) ALIDE2_RS17070 PF13362 Toprim domain ALIDE2_RS17070 PF18818 Metallopeptidase superfamily domain ALIDE2_RS17130 PF00589 Phage integrase family ALIDE2_RS17130 PF02899 Phage integrase, N-terminal SAM-like domain ALIDE2_RS17135 PF00588 SpoU rRNA Methylase family ALIDE2_RS17135 PF08032 RNA 2'-O ribose methyltransferase substrate binding ALIDE2_RS17140 PF01351 Ribonuclease HII ALIDE2_RS17145 PF02684 Lipid-A-disaccharide synthetase ALIDE2_RS17150 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE2_RS17150 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ALIDE2_RS17155 PF07977 FabA-like domain ALIDE2_RS17160 PF14602 Hexapeptide repeat of succinyl-transferase ALIDE2_RS17160 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ALIDE2_RS17160 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE2_RS17170 PF01103 Surface antigen ALIDE2_RS17170 PF07244 Surface antigen variable number repeat ALIDE2_RS17175 PF02163 Peptidase family M50 ALIDE2_RS17175 PF17820 PDZ domain ALIDE2_RS17180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ALIDE2_RS17180 PF13288 DXP reductoisomerase C-terminal domain ALIDE2_RS17180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ALIDE2_RS17190 PF01255 Putative undecaprenyl diphosphate synthase ALIDE2_RS17195 PF01765 Ribosome recycling factor ALIDE2_RS17200 PF00696 Amino acid kinase family ALIDE2_RS17205 PF00889 Elongation factor TS ALIDE2_RS17210 PF00318 Ribosomal protein S2 ALIDE2_RS17215 PF01425 Amidase ALIDE2_RS17220 PF01266 FAD dependent oxidoreductase ALIDE2_RS17250 PF13411 MerR HTH family regulatory protein ALIDE2_RS17255 PF00403 Heavy-metal-associated domain ALIDE2_RS17280 PF03576 Peptidase family S58 ALIDE2_RS17290 PF00005 ABC transporter ALIDE2_RS17290 PF12848 ABC transporter ALIDE2_RS17295 PF00271 Helicase conserved C-terminal domain ALIDE2_RS17295 PF00270 DEAD/DEAH box helicase ALIDE2_RS17335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS17335 PF03466 LysR substrate binding domain ALIDE2_RS17340 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS17340 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS17340 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS17345 PF02515 CoA-transferase family III ALIDE2_RS17350 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS17370 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS17370 PF00970 Oxidoreductase FAD-binding domain ALIDE2_RS17370 PF00175 Oxidoreductase NAD-binding domain ALIDE2_RS17375 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS17380 PF03466 LysR substrate binding domain ALIDE2_RS17380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS17390 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS17395 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS17410 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ALIDE2_RS17415 PF00535 Glycosyl transferase family 2 ALIDE2_RS17420 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ALIDE2_RS17425 PF01743 Poly A polymerase head domain ALIDE2_RS17425 PF12626 Polymerase A arginine-rich C-terminus ALIDE2_RS17425 PF12627 Probable RNA and SrmB- binding site of polymerase A ALIDE2_RS17435 PF00308 Bacterial dnaA protein ALIDE2_RS17445 PF00586 AIR synthase related protein, N-terminal domain ALIDE2_RS17445 PF02769 AIR synthase related protein, C-terminal domain ALIDE2_RS17455 PF00582 Universal stress protein family ALIDE2_RS17460 PF13369 Transglutaminase-like superfamily ALIDE2_RS17465 PF03023 Lipid II flippase MurJ ALIDE2_RS17470 PF01649 Ribosomal protein S20 ALIDE2_RS17485 PF03050 Transposase IS66 family ALIDE2_RS17485 PF13817 IS66 C-terminal element ALIDE2_RS17485 PF13007 Transposase C of IS166 homeodomain ALIDE2_RS17485 PF13005 zinc-finger binding domain of transposase IS66 ALIDE2_RS17500 PF13333 Integrase core domain ALIDE2_RS17500 PF00665 Integrase core domain ALIDE2_RS17500 PF13276 HTH-like domain ALIDE2_RS17505 PF01527 Transposase ALIDE2_RS17510 PF13609 Gram-negative porin ALIDE2_RS17515 PF01695 IstB-like ATP binding protein ALIDE2_RS17520 PF00665 Integrase core domain ALIDE2_RS17540 PF03737 Aldolase/RraA ALIDE2_RS17550 PF00202 Aminotransferase class-III ALIDE2_RS17555 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALIDE2_RS17555 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALIDE2_RS17570 PF03692 Putative zinc- or iron-chelating domain ALIDE2_RS17580 PF07664 Ferrous iron transport protein B C terminus ALIDE2_RS17580 PF07670 Nucleoside recognition ALIDE2_RS17580 PF02421 Ferrous iron transport protein B ALIDE2_RS17595 PF04199 Putative cyclase ALIDE2_RS17600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS17600 PF03466 LysR substrate binding domain ALIDE2_RS17605 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS17610 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS17610 PF12911 N-terminal TM domain of oligopeptide transport permease C ALIDE2_RS17615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE2_RS17615 PF00005 ABC transporter ALIDE2_RS17620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE2_RS17620 PF00005 ABC transporter ALIDE2_RS17625 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE2_RS17635 PF00962 Adenosine/AMP deaminase ALIDE2_RS17645 PF01614 Bacterial transcriptional regulator ALIDE2_RS17645 PF09339 IclR helix-turn-helix domain ALIDE2_RS17650 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS17655 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS17660 PF00005 ABC transporter ALIDE2_RS17665 PF01266 FAD dependent oxidoreductase ALIDE2_RS17670 PF02608 ABC transporter substrate-binding protein PnrA-like ALIDE2_RS17675 PF02608 ABC transporter substrate-binding protein PnrA-like ALIDE2_RS17685 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS17690 PF00005 ABC transporter ALIDE2_RS17695 PF08447 PAS fold ALIDE2_RS17695 PF08448 PAS fold ALIDE2_RS17695 PF00563 EAL domain ALIDE2_RS17695 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS17695 PF13426 PAS domain ALIDE2_RS17695 PF05231 MASE1 ALIDE2_RS17720 PF13609 Gram-negative porin ALIDE2_RS17725 PF01230 HIT domain ALIDE2_RS17730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS17730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ALIDE2_RS17735 PF07690 Major Facilitator Superfamily ALIDE2_RS17745 PF00005 ABC transporter ALIDE2_RS17750 PF00011 Hsp20/alpha crystallin family ALIDE2_RS17775 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS17790 PF00005 ABC transporter ALIDE2_RS17795 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS17795 PF00005 ABC transporter ALIDE2_RS17800 PF03459 TOBE domain ALIDE2_RS17800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS17810 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS17815 PF03459 TOBE domain ALIDE2_RS17815 PF00005 ABC transporter ALIDE2_RS17825 PF12849 PBP superfamily domain ALIDE2_RS17830 PF00005 ABC transporter ALIDE2_RS17835 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS17840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS17840 PF03459 TOBE domain ALIDE2_RS17845 PF13091 PLD-like domain ALIDE2_RS17850 PF00501 AMP-binding enzyme ALIDE2_RS17850 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS17855 PF08278 DNA primase DnaG DnaB-binding ALIDE2_RS17855 PF08275 DNA primase catalytic core, N-terminal domain ALIDE2_RS17855 PF01807 CHC2 zinc finger ALIDE2_RS17855 PF10410 DnaB-helicase binding domain of primase ALIDE2_RS17860 PF04546 Sigma-70, non-essential region ALIDE2_RS17860 PF04545 Sigma-70, region 4 ALIDE2_RS17860 PF04539 Sigma-70 region 3 ALIDE2_RS17860 PF04542 Sigma-70 region 2 ALIDE2_RS17860 PF00140 Sigma-70 factor, region 1.2 ALIDE2_RS17860 PF03979 Sigma-70 factor, region 1.1 ALIDE2_RS17870 PF02558 Ketopantoate reductase PanE/ApbA ALIDE2_RS17870 PF08546 Ketopantoate reductase PanE/ApbA C terminal ALIDE2_RS17875 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS17880 PF02515 CoA-transferase family III ALIDE2_RS17885 PF00682 HMGL-like ALIDE2_RS17890 PF03466 LysR substrate binding domain ALIDE2_RS17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS17900 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE2_RS17905 PF04055 Radical SAM superfamily ALIDE2_RS17905 PF18693 TRAM domain ALIDE2_RS17905 PF00919 Uncharacterized protein family UPF0004 ALIDE2_RS17910 PF05233 PHB accumulation regulatory domain ALIDE2_RS17910 PF07879 PHB/PHA accumulation regulator DNA-binding domain ALIDE2_RS17915 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ALIDE2_RS17930 PF02824 TGS domain ALIDE2_RS17930 PF04607 Region found in RelA / SpoT proteins ALIDE2_RS17930 PF13291 ACT domain ALIDE2_RS17940 PF00106 short chain dehydrogenase ALIDE2_RS17950 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS17950 PF00072 Response regulator receiver domain ALIDE2_RS17955 PF00672 HAMP domain ALIDE2_RS17955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS17955 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS17960 PF02542 YgbB family ALIDE2_RS17965 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ALIDE2_RS17965 PF02542 YgbB family ALIDE2_RS17970 PF17757 UvrB interaction domain ALIDE2_RS17970 PF00271 Helicase conserved C-terminal domain ALIDE2_RS17970 PF03461 TRCF domain ALIDE2_RS17970 PF02559 CarD-like/TRCF domain ALIDE2_RS17970 PF00270 DEAD/DEAH box helicase ALIDE2_RS17980 PF01232 Mannitol dehydrogenase Rossmann domain ALIDE2_RS17980 PF08125 Mannitol dehydrogenase C-terminal domain ALIDE2_RS17990 PF04397 LytTr DNA-binding domain ALIDE2_RS17990 PF00072 Response regulator receiver domain ALIDE2_RS18000 PF01738 Dienelactone hydrolase family ALIDE2_RS18005 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS18010 PF02515 CoA-transferase family III ALIDE2_RS18015 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS18020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS18020 PF03466 LysR substrate binding domain ALIDE2_RS18030 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS18040 PF03466 LysR substrate binding domain ALIDE2_RS18040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS18045 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ALIDE2_RS18045 PF00476 DNA polymerase family A ALIDE2_RS18045 PF01612 3'-5' exonuclease ALIDE2_RS18045 PF01367 5'-3' exonuclease, C-terminal SAM fold ALIDE2_RS18060 PF01636 Phosphotransferase enzyme family ALIDE2_RS18070 PF00563 EAL domain ALIDE2_RS18070 PF00360 Phytochrome region ALIDE2_RS18070 PF01590 GAF domain ALIDE2_RS18070 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS18080 PF13361 UvrD-like helicase C-terminal domain ALIDE2_RS18080 PF00580 UvrD/REP helicase N-terminal domain ALIDE2_RS18085 PF00478 IMP dehydrogenase / GMP reductase domain ALIDE2_RS18115 PF02514 CobN/Magnesium Chelatase ALIDE2_RS18120 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS18120 PF00593 TonB dependent receptor ALIDE2_RS18130 PF00005 ABC transporter ALIDE2_RS18165 PF07690 Major Facilitator Superfamily ALIDE2_RS18180 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS18185 PF01144 Coenzyme A transferase ALIDE2_RS18190 PF01144 Coenzyme A transferase ALIDE2_RS18195 PF02426 Muconolactone delta-isomerase ALIDE2_RS18205 PF03466 LysR substrate binding domain ALIDE2_RS18205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS18210 PF08447 PAS fold ALIDE2_RS18210 PF05231 MASE1 ALIDE2_RS18210 PF13426 PAS domain ALIDE2_RS18210 PF00563 EAL domain ALIDE2_RS18210 PF08448 PAS fold ALIDE2_RS18210 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS18215 PF00271 Helicase conserved C-terminal domain ALIDE2_RS18215 PF00270 DEAD/DEAH box helicase ALIDE2_RS18220 PF13458 Periplasmic binding protein ALIDE2_RS18225 PF00929 Exonuclease ALIDE2_RS18230 PF01435 Peptidase family M48 ALIDE2_RS18235 PF01329 Pterin 4 alpha carbinolamine dehydratase ALIDE2_RS18240 PF03193 RsgA GTPase ALIDE2_RS18245 PF01740 STAS domain ALIDE2_RS18245 PF00916 Sulfate permease family ALIDE2_RS18250 PF00155 Aminotransferase class I and II ALIDE2_RS18255 PF03186 CobD/Cbib protein ALIDE2_RS18255 PF17113 Regulatory signalling modulator protein AmpE ALIDE2_RS18260 PF00293 NUDIX domain ALIDE2_RS18265 PF01245 Ribosomal protein L19 ALIDE2_RS18270 PF01746 tRNA (Guanine-1)-methyltransferase ALIDE2_RS18275 PF01782 RimM N-terminal domain ALIDE2_RS18275 PF05239 PRC-barrel domain ALIDE2_RS18280 PF00886 Ribosomal protein S16 ALIDE2_RS18295 PF01384 Phosphate transporter family ALIDE2_RS18300 PF01865 Protein of unknown function DUF47 ALIDE2_RS18315 PF00005 ABC transporter ALIDE2_RS18320 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS18320 PF00005 ABC transporter ALIDE2_RS18325 PF11862 Domain of unknown function (DUF3382) ALIDE2_RS18325 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS18330 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS18335 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS18335 PF16193 AAA C-terminal domain ALIDE2_RS18335 PF12002 MgsA AAA+ ATPase C terminal ALIDE2_RS18340 PF13495 Phage integrase, N-terminal SAM-like domain ALIDE2_RS18340 PF00589 Phage integrase family ALIDE2_RS18345 PF13276 HTH-like domain ALIDE2_RS18345 PF13683 Integrase core domain ALIDE2_RS18350 PF01527 Transposase ALIDE2_RS18365 PF03167 Uracil DNA glycosylase superfamily ALIDE2_RS18370 PF01040 UbiA prenyltransferase family ALIDE2_RS18375 PF03548 Outer membrane lipoprotein carrier protein LolA ALIDE2_RS18380 PF09397 Ftsk gamma domain ALIDE2_RS18380 PF17854 FtsK alpha domain ALIDE2_RS18380 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ALIDE2_RS18380 PF01580 FtsK/SpoIIIE family ALIDE2_RS18385 PF07992 Pyridine nucleotide-disulphide oxidoreductase ALIDE2_RS18390 PF00830 Ribosomal L28 family ALIDE2_RS18395 PF00471 Ribosomal protein L33 ALIDE2_RS18400 PF01189 16S rRNA methyltransferase RsmB/F ALIDE2_RS18400 PF01029 NusB family ALIDE2_RS18405 PF00551 Formyl transferase ALIDE2_RS18410 PF04337 Protein of unknown function, DUF480 ALIDE2_RS18415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS18415 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS18415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS18420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS18420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS18420 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS18430 PF06574 FAD synthetase ALIDE2_RS18430 PF01687 Riboflavin kinase ALIDE2_RS18435 PF06827 Zinc finger found in FPG and IleRS ALIDE2_RS18435 PF00133 tRNA synthetases class I (I, L, M and V) ALIDE2_RS18435 PF08264 Anticodon-binding domain of tRNA ALIDE2_RS18440 PF01252 Signal peptidase (SPase) II ALIDE2_RS18445 PF00356 Bacterial regulatory proteins, lacI family ALIDE2_RS18455 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS18460 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS18465 PF12857 TOBE-like domain ALIDE2_RS18465 PF17850 CysA C-terminal regulatory domain ALIDE2_RS18465 PF00005 ABC transporter ALIDE2_RS18470 PF00149 Calcineurin-like phosphoesterase ALIDE2_RS18475 PF02690 Na+/Pi-cotransporter ALIDE2_RS18480 PF13593 SBF-like CPA transporter family (DUF4137) ALIDE2_RS18485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS18485 PF03466 LysR substrate binding domain ALIDE2_RS18495 PF00107 Zinc-binding dehydrogenase ALIDE2_RS18495 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS18500 PF00892 EamA-like transporter family ALIDE2_RS18505 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS18505 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS18505 PF00563 EAL domain ALIDE2_RS18515 PF00106 short chain dehydrogenase ALIDE2_RS18520 PF01970 Tripartite tricarboxylate transporter TctA family ALIDE2_RS18530 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ALIDE2_RS18530 PF00437 Type II/IV secretion system protein ALIDE2_RS18545 PF01026 TatD related DNase ALIDE2_RS18555 PF01022 Bacterial regulatory protein, arsR family ALIDE2_RS18560 PF02627 Carboxymuconolactone decarboxylase family ALIDE2_RS18565 PF00595 PDZ domain ALIDE2_RS18570 PF17863 AAA lid domain ALIDE2_RS18570 PF07726 ATPase family associated with various cellular activities (AAA) ALIDE2_RS18575 PF01882 Protein of unknown function DUF58 ALIDE2_RS18580 PF07584 Aerotolerance regulator N-terminal ALIDE2_RS18580 PF00092 von Willebrand factor type A domain ALIDE2_RS18585 PF00501 AMP-binding enzyme ALIDE2_RS18585 PF16177 Acetyl-coenzyme A synthetase N-terminus ALIDE2_RS18585 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS18590 PF00571 CBS domain ALIDE2_RS18590 PF00005 ABC transporter ALIDE2_RS18595 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS18600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ALIDE2_RS18605 PF00027 Cyclic nucleotide-binding domain ALIDE2_RS18605 PF13545 Crp-like helix-turn-helix domain ALIDE2_RS18610 PF00206 Lyase ALIDE2_RS18610 PF10415 Fumarase C C-terminus ALIDE2_RS18620 PF00182 Chitinase class I ALIDE2_RS18625 PF01523 Putative modulator of DNA gyrase ALIDE2_RS18630 PF04751 Protein of unknown function (DUF615) ALIDE2_RS18635 PF00994 Probable molybdopterin binding domain ALIDE2_RS18640 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS18640 PF00107 Zinc-binding dehydrogenase ALIDE2_RS18650 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE2_RS18655 PF00588 SpoU rRNA Methylase family ALIDE2_RS18660 PF00459 Inositol monophosphatase family ALIDE2_RS18675 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ALIDE2_RS18680 PF00270 DEAD/DEAH box helicase ALIDE2_RS18680 PF08494 DEAD/H associated ALIDE2_RS18680 PF00271 Helicase conserved C-terminal domain ALIDE2_RS18685 PF03480 Bacterial extracellular solute-binding protein, family 7 ALIDE2_RS18690 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ALIDE2_RS18690 PF02779 Transketolase, pyrimidine binding domain ALIDE2_RS18690 PF02780 Transketolase, C-terminal domain ALIDE2_RS18695 PF00348 Polyprenyl synthetase ALIDE2_RS18700 PF02609 Exonuclease VII small subunit ALIDE2_RS18715 PF00581 Rhodanese-like domain ALIDE2_RS18720 PF00171 Aldehyde dehydrogenase family ALIDE2_RS18725 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS18725 PF03772 Competence protein ALIDE2_RS18735 PF00521 DNA gyrase/topoisomerase IV, subunit A ALIDE2_RS18740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS18740 PF00986 DNA gyrase B subunit, carboxyl terminus ALIDE2_RS18740 PF00204 DNA gyrase B ALIDE2_RS18740 PF01751 Toprim domain ALIDE2_RS18755 PF00701 Dihydrodipicolinate synthetase family ALIDE2_RS18760 PF06804 NlpB/DapX lipoprotein ALIDE2_RS18775 PF08007 Cupin superfamily protein ALIDE2_RS18780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ALIDE2_RS18785 PF00692 dUTPase ALIDE2_RS18795 PF02441 Flavoprotein ALIDE2_RS18795 PF04127 DNA / pantothenate metabolism flavoprotein ALIDE2_RS18800 PF00117 Glutamine amidotransferase class-I ALIDE2_RS18800 PF06418 CTP synthase N-terminus ALIDE2_RS18805 PF00793 DAHP synthetase I family ALIDE2_RS18815 PF03952 Enolase, N-terminal domain ALIDE2_RS18815 PF00113 Enolase, C-terminal TIM barrel domain ALIDE2_RS18820 PF04977 Septum formation initiator ALIDE2_RS18825 PF00005 ABC transporter ALIDE2_RS18830 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS18835 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS18840 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS18845 PF01430 Hsp33 protein ALIDE2_RS18850 PF00132 Bacterial transferase hexapeptide (six repeats) ALIDE2_RS18855 PF04305 Protein of unknown function (DUF455) ALIDE2_RS18860 PF00563 EAL domain ALIDE2_RS18860 PF08668 HDOD domain ALIDE2_RS18865 PF00563 EAL domain ALIDE2_RS18865 PF08668 HDOD domain ALIDE2_RS18870 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS18885 PF02075 Crossover junction endodeoxyribonuclease RuvC ALIDE2_RS18890 PF01527 Transposase ALIDE2_RS18895 PF13276 HTH-like domain ALIDE2_RS18895 PF13683 Integrase core domain ALIDE2_RS18905 PF00912 Transglycosylase ALIDE2_RS18910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ALIDE2_RS18910 PF01488 Shikimate / quinate 5-dehydrogenase ALIDE2_RS18910 PF08501 Shikimate dehydrogenase substrate binding domain ALIDE2_RS18920 PF00773 RNB domain ALIDE2_RS18925 PF04542 Sigma-70 region 2 ALIDE2_RS18925 PF08281 Sigma-70, region 4 ALIDE2_RS18935 PF00034 Cytochrome c ALIDE2_RS18945 PF05728 Uncharacterised protein family (UPF0227) ALIDE2_RS18950 PF01098 Cell cycle protein ALIDE2_RS18955 PF01523 Putative modulator of DNA gyrase ALIDE2_RS18960 PF00793 DAHP synthetase I family ALIDE2_RS18970 PF01225 Mur ligase family, catalytic domain ALIDE2_RS18970 PF02875 Mur ligase family, glutamate ligase domain ALIDE2_RS18970 PF08245 Mur ligase middle domain ALIDE2_RS18980 PF00578 AhpC/TSA family ALIDE2_RS18985 PF00364 Biotin-requiring enzyme ALIDE2_RS18990 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS18990 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS18990 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS19005 PF00294 pfkB family carbohydrate kinase ALIDE2_RS19015 PF00268 Ribonucleotide reductase, small chain ALIDE2_RS19020 PF03477 ATP cone domain ALIDE2_RS19020 PF00317 Ribonucleotide reductase, all-alpha domain ALIDE2_RS19020 PF02867 Ribonucleotide reductase, barrel domain ALIDE2_RS19025 PF01510 N-acetylmuramoyl-L-alanine amidase ALIDE2_RS19030 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS19030 PF00158 Sigma-54 interaction domain ALIDE2_RS19030 PF00072 Response regulator receiver domain ALIDE2_RS19035 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS19045 PF01578 Cytochrome C assembly protein ALIDE2_RS19050 PF00448 SRP54-type protein, GTPase domain ALIDE2_RS19050 PF02881 SRP54-type protein, helical bundle domain ALIDE2_RS19050 PF02978 Signal peptide binding domain ALIDE2_RS19055 PF01938 TRAM domain ALIDE2_RS19055 PF00919 Uncharacterized protein family UPF0004 ALIDE2_RS19055 PF04055 Radical SAM superfamily ALIDE2_RS19080 PF10411 Disulfide bond isomerase protein N-terminus ALIDE2_RS19080 PF13098 Thioredoxin-like domain ALIDE2_RS19085 PF01494 FAD binding domain ALIDE2_RS19090 PF01926 50S ribosome-binding GTPase ALIDE2_RS19090 PF06071 Protein of unknown function (DUF933) ALIDE2_RS19100 PF01527 Transposase ALIDE2_RS19105 PF13683 Integrase core domain ALIDE2_RS19105 PF13276 HTH-like domain ALIDE2_RS19120 PF13817 IS66 C-terminal element ALIDE2_RS19120 PF13005 zinc-finger binding domain of transposase IS66 ALIDE2_RS19120 PF13007 Transposase C of IS166 homeodomain ALIDE2_RS19120 PF03050 Transposase IS66 family ALIDE2_RS19125 PF01695 IstB-like ATP binding protein ALIDE2_RS19130 PF00665 Integrase core domain ALIDE2_RS19135 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS19135 PF00501 AMP-binding enzyme ALIDE2_RS19140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS19140 PF12806 Acetyl-CoA dehydrogenase C-terminal like ALIDE2_RS19140 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS19140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS19150 PF07690 Major Facilitator Superfamily ALIDE2_RS19165 PF05853 beta-keto acid cleavage enzyme ALIDE2_RS19170 PF02668 Taurine catabolism dioxygenase TauD, TfdA family ALIDE2_RS19175 PF00107 Zinc-binding dehydrogenase ALIDE2_RS19175 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS19185 PF00355 Rieske [2Fe-2S] domain ALIDE2_RS19190 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS19190 PF00072 Response regulator receiver domain ALIDE2_RS19200 PF07044 Protein of unknown function (DUF1329) ALIDE2_RS19215 PF03601 Conserved hypothetical protein 698 ALIDE2_RS19225 PF09335 SNARE associated Golgi protein ALIDE2_RS19230 PF01207 Dihydrouridine synthase (Dus) ALIDE2_RS19235 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS19240 PF02142 MGS-like domain ALIDE2_RS19240 PF01808 AICARFT/IMPCHase bienzyme ALIDE2_RS19245 PF00202 Aminotransferase class-III ALIDE2_RS19255 PF00072 Response regulator receiver domain ALIDE2_RS19260 PF00072 Response regulator receiver domain ALIDE2_RS19270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS19270 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ALIDE2_RS19275 PF02895 Signal transducing histidine kinase, homodimeric domain ALIDE2_RS19275 PF01584 CheW-like domain ALIDE2_RS19275 PF01627 Hpt domain ALIDE2_RS19275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS19275 PF00072 Response regulator receiver domain ALIDE2_RS19280 PF02622 Uncharacterized ACR, COG1678 ALIDE2_RS19285 PF03652 Holliday junction resolvase ALIDE2_RS19290 PF00156 Phosphoribosyl transferase domain ALIDE2_RS19295 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ALIDE2_RS19295 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ALIDE2_RS19300 PF01979 Amidohydrolase family ALIDE2_RS19305 PF01553 Acyltransferase ALIDE2_RS19310 PF00005 ABC transporter ALIDE2_RS19310 PF08402 TOBE domain ALIDE2_RS19315 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS19320 PF03960 ArsC family ALIDE2_RS19325 PF13180 PDZ domain ALIDE2_RS19330 PF00072 Response regulator receiver domain ALIDE2_RS19330 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS19335 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS19335 PF08521 Two-component sensor kinase N-terminal ALIDE2_RS19335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS19340 PF13091 PLD-like domain ALIDE2_RS19340 PF13396 Phospholipase_D-nuclease N-terminal ALIDE2_RS19345 PF00175 Oxidoreductase NAD-binding domain ALIDE2_RS19345 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS19345 PF00970 Oxidoreductase FAD-binding domain ALIDE2_RS19350 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE2_RS19370 PF01040 UbiA prenyltransferase family ALIDE2_RS19375 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE2_RS19380 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALIDE2_RS19380 PF09125 Cytochrome C oxidase subunit II, transmembrane ALIDE2_RS19395 PF04357 TamB, inner membrane protein subunit of TAM complex ALIDE2_RS19415 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS19420 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS19420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS19420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS19425 PF02515 CoA-transferase family III ALIDE2_RS19430 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS19435 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS19445 PF07724 AAA domain (Cdc48 subfamily) ALIDE2_RS19445 PF10431 C-terminal, D2-small domain, of ClpB protein ALIDE2_RS19445 PF06689 ClpX C4-type zinc finger ALIDE2_RS19450 PF00034 Cytochrome c ALIDE2_RS19465 PF01614 Bacterial transcriptional regulator ALIDE2_RS19465 PF09339 IclR helix-turn-helix domain ALIDE2_RS19470 PF01144 Coenzyme A transferase ALIDE2_RS19475 PF01144 Coenzyme A transferase ALIDE2_RS19480 PF00108 Thiolase, N-terminal domain ALIDE2_RS19480 PF02803 Thiolase, C-terminal domain ALIDE2_RS19485 PF00106 short chain dehydrogenase ALIDE2_RS19490 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS19495 PF03466 LysR substrate binding domain ALIDE2_RS19495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS19500 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS19505 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS19505 PF07687 Peptidase dimerisation domain ALIDE2_RS19510 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS19515 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS19525 PF04303 PrpF protein ALIDE2_RS19530 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS19535 PF00694 Aconitase C-terminal domain ALIDE2_RS19540 PF00330 Aconitase family (aconitate hydratase) ALIDE2_RS19550 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS19550 PF07702 UTRA domain ALIDE2_RS19555 PF02254 TrkA-N domain ALIDE2_RS19555 PF00999 Sodium/hydrogen exchanger family ALIDE2_RS19560 PF01810 LysE type translocator ALIDE2_RS19565 PF07015 VirC1 protein ALIDE2_RS19575 PF03466 LysR substrate binding domain ALIDE2_RS19575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS19580 PF00588 SpoU rRNA Methylase family ALIDE2_RS19590 PF08241 Methyltransferase domain ALIDE2_RS19595 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ALIDE2_RS19595 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ALIDE2_RS19600 PF00115 Cytochrome C and Quinol oxidase polypeptide I ALIDE2_RS19605 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ALIDE2_RS19615 PF00510 Cytochrome c oxidase subunit III ALIDE2_RS19640 PF01040 UbiA prenyltransferase family ALIDE2_RS19645 PF02630 SCO1/SenC ALIDE2_RS19650 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS19655 PF04542 Sigma-70 region 2 ALIDE2_RS19655 PF04545 Sigma-70, region 4 ALIDE2_RS19655 PF00140 Sigma-70 factor, region 1.2 ALIDE2_RS19660 PF13007 Transposase C of IS166 homeodomain ALIDE2_RS19660 PF03050 Transposase IS66 family ALIDE2_RS19660 PF13817 IS66 C-terminal element ALIDE2_RS19660 PF13005 zinc-finger binding domain of transposase IS66 ALIDE2_RS19675 PF13276 HTH-like domain ALIDE2_RS19675 PF13683 Integrase core domain ALIDE2_RS19680 PF01527 Transposase ALIDE2_RS19700 PF04055 Radical SAM superfamily ALIDE2_RS19700 PF06969 HemN C-terminal domain ALIDE2_RS19705 PF01725 Ham1 family ALIDE2_RS19710 PF01138 3' exoribonuclease family, domain 1 ALIDE2_RS19710 PF03725 3' exoribonuclease family, domain 2 ALIDE2_RS19720 PF00069 Protein kinase domain ALIDE2_RS19720 PF03793 PASTA domain ALIDE2_RS19725 PF03755 YicC-like family, N-terminal region ALIDE2_RS19725 PF08340 Domain of unknown function (DUF1732) ALIDE2_RS19795 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS19795 PF16450 Proteasomal ATPase OB C-terminal domain ALIDE2_RS19795 PF17758 Proteasomal ATPase OB N-terminal domain ALIDE2_RS19820 PF00625 Guanylate kinase ALIDE2_RS19825 PF01192 RNA polymerase Rpb6 ALIDE2_RS19830 PF02824 TGS domain ALIDE2_RS19830 PF04607 Region found in RelA / SpoT proteins ALIDE2_RS19830 PF13291 ACT domain ALIDE2_RS19835 PF01272 Transcription elongation factor, GreA/GreB, C-term ALIDE2_RS19835 PF03449 Transcription elongation factor, N-terminal ALIDE2_RS19850 PF00312 Ribosomal protein S15 ALIDE2_RS19855 PF00013 KH domain ALIDE2_RS19855 PF01138 3' exoribonuclease family, domain 1 ALIDE2_RS19855 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ALIDE2_RS19855 PF00575 S1 RNA binding domain ALIDE2_RS19855 PF03725 3' exoribonuclease family, domain 2 ALIDE2_RS19860 PF00550 Phosphopantetheine attachment site ALIDE2_RS19860 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS19860 PF08659 KR domain ALIDE2_RS19860 PF14765 Polyketide synthase dehydratase ALIDE2_RS19860 PF00109 Beta-ketoacyl synthase, N-terminal domain ALIDE2_RS19860 PF16197 Ketoacyl-synthetase C-terminal extension ALIDE2_RS19860 PF02801 Beta-ketoacyl synthase, C-terminal domain ALIDE2_RS19860 PF00698 Acyl transferase domain ALIDE2_RS19865 PF00121 Triosephosphate isomerase ALIDE2_RS19870 PF03840 Preprotein translocase SecG subunit ALIDE2_RS19880 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ALIDE2_RS19885 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ALIDE2_RS19890 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ALIDE2_RS19895 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ALIDE2_RS19905 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ALIDE2_RS19905 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ALIDE2_RS19905 PF10531 SLBB domain ALIDE2_RS19910 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ALIDE2_RS19910 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal ALIDE2_RS19910 PF00384 Molybdopterin oxidoreductase ALIDE2_RS19915 PF00146 NADH dehydrogenase ALIDE2_RS19920 PF12838 4Fe-4S dicluster domain ALIDE2_RS19925 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ALIDE2_RS19930 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ALIDE2_RS19935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ALIDE2_RS19935 PF00361 Proton-conducting membrane transporter ALIDE2_RS19940 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus ALIDE2_RS19940 PF00361 Proton-conducting membrane transporter ALIDE2_RS19945 PF00361 Proton-conducting membrane transporter ALIDE2_RS19965 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ALIDE2_RS19965 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ALIDE2_RS19970 PF08676 MutL C terminal dimerisation domain ALIDE2_RS19970 PF01119 DNA mismatch repair protein, C-terminal domain ALIDE2_RS19980 PF09335 SNARE associated Golgi protein ALIDE2_RS19985 PF01979 Amidohydrolase family ALIDE2_RS19990 PF00860 Permease family ALIDE2_RS19995 PF03466 LysR substrate binding domain ALIDE2_RS19995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS20000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ALIDE2_RS20000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ALIDE2_RS20005 PF00941 FAD binding domain in molybdopterin dehydrogenase ALIDE2_RS20005 PF03450 CO dehydrogenase flavoprotein C-terminal domain ALIDE2_RS20015 PF11741 AMIN domain ALIDE2_RS20015 PF01520 N-acetylmuramoyl-L-alanine amidase ALIDE2_RS20020 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ALIDE2_RS20025 PF08331 Domain of unknown function (DUF1730) ALIDE2_RS20035 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS20040 PF02899 Phage integrase, N-terminal SAM-like domain ALIDE2_RS20040 PF00589 Phage integrase family ALIDE2_RS20045 PF08241 Methyltransferase domain ALIDE2_RS20050 PF13667 ThiC-associated domain ALIDE2_RS20050 PF01964 Radical SAM ThiC family ALIDE2_RS20055 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ALIDE2_RS20070 PF00501 AMP-binding enzyme ALIDE2_RS20070 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS20085 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS20090 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS20090 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS20090 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS20095 PF00091 Tubulin/FtsZ family, GTPase domain ALIDE2_RS20095 PF12327 FtsZ family, C-terminal domain ALIDE2_RS20100 PF02491 SHS2 domain inserted in FTSA ALIDE2_RS20105 PF03799 Cell division protein FtsQ ALIDE2_RS20105 PF08478 POTRA domain, FtsQ-type ALIDE2_RS20110 PF01820 D-ala D-ala ligase N-terminus ALIDE2_RS20110 PF07478 D-ala D-ala ligase C-terminus ALIDE2_RS20115 PF01225 Mur ligase family, catalytic domain ALIDE2_RS20115 PF02875 Mur ligase family, glutamate ligase domain ALIDE2_RS20115 PF08245 Mur ligase middle domain ALIDE2_RS20120 PF03033 Glycosyltransferase family 28 N-terminal domain ALIDE2_RS20120 PF04101 Glycosyltransferase family 28 C-terminal domain ALIDE2_RS20125 PF01098 Cell cycle protein ALIDE2_RS20130 PF02875 Mur ligase family, glutamate ligase domain ALIDE2_RS20130 PF08245 Mur ligase middle domain ALIDE2_RS20135 PF00953 Glycosyl transferase family 4 ALIDE2_RS20135 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ALIDE2_RS20140 PF08245 Mur ligase middle domain ALIDE2_RS20140 PF02875 Mur ligase family, glutamate ligase domain ALIDE2_RS20140 PF01225 Mur ligase family, catalytic domain ALIDE2_RS20145 PF02875 Mur ligase family, glutamate ligase domain ALIDE2_RS20145 PF08245 Mur ligase middle domain ALIDE2_RS20150 PF00905 Penicillin binding protein transpeptidase domain ALIDE2_RS20150 PF03717 Penicillin-binding Protein dimerisation domain ALIDE2_RS20160 PF01795 MraW methylase family ALIDE2_RS20165 PF02381 MraZ protein, putative antitoxin-like ALIDE2_RS20170 PF07724 AAA domain (Cdc48 subfamily) ALIDE2_RS20170 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS20175 PF00227 Proteasome subunit ALIDE2_RS20185 PF01258 Prokaryotic dksA/traR C4-type zinc finger ALIDE2_RS20190 PF07683 Cobalamin synthesis protein cobW C-terminal domain ALIDE2_RS20190 PF02492 CobW/HypB/UreG, nucleotide-binding domain ALIDE2_RS20200 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS20200 PF00072 Response regulator receiver domain ALIDE2_RS20200 PF00158 Sigma-54 interaction domain ALIDE2_RS20205 PF00072 Response regulator receiver domain ALIDE2_RS20205 PF01339 CheB methylesterase ALIDE2_RS20210 PF00072 Response regulator receiver domain ALIDE2_RS20210 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS20215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS20215 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS20215 PF00989 PAS fold ALIDE2_RS20220 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS20220 PF00072 Response regulator receiver domain ALIDE2_RS20225 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS20225 PF00072 Response regulator receiver domain ALIDE2_RS20230 PF11849 Domain of unknown function (DUF3369) ALIDE2_RS20240 PF01627 Hpt domain ALIDE2_RS20240 PF00672 HAMP domain ALIDE2_RS20240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ALIDE2_RS20240 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS20240 PF00072 Response regulator receiver domain ALIDE2_RS20240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS20245 PF02203 Tar ligand binding domain homologue ALIDE2_RS20245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS20245 PF00672 HAMP domain ALIDE2_RS20250 PF00589 Phage integrase family ALIDE2_RS20250 PF02899 Phage integrase, N-terminal SAM-like domain ALIDE2_RS20260 PF01678 Diaminopimelate epimerase ALIDE2_RS20270 PF00849 RNA pseudouridylate synthase ALIDE2_RS20270 PF01479 S4 domain ALIDE2_RS20280 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS20300 PF03466 LysR substrate binding domain ALIDE2_RS20300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS20305 PF03328 HpcH/HpaI aldolase/citrate lyase family ALIDE2_RS20310 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS20315 PF02515 CoA-transferase family III ALIDE2_RS20320 PF04909 Amidohydrolase ALIDE2_RS20325 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS20330 PF12802 MarR family ALIDE2_RS20340 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS20345 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS20345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS20345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS20350 PF00501 AMP-binding enzyme ALIDE2_RS20350 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS20355 PF00766 Electron transfer flavoprotein FAD-binding domain ALIDE2_RS20355 PF01012 Electron transfer flavoprotein domain ALIDE2_RS20360 PF01012 Electron transfer flavoprotein domain ALIDE2_RS20365 PF03060 Nitronate monooxygenase ALIDE2_RS20370 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS20375 PF02515 CoA-transferase family III ALIDE2_RS20385 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS20390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS20390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS20390 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS20395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS20395 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS20395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS20400 PF00108 Thiolase, N-terminal domain ALIDE2_RS20400 PF02803 Thiolase, C-terminal domain ALIDE2_RS20405 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS20405 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE2_RS20405 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS20410 PF03466 LysR substrate binding domain ALIDE2_RS20410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS20420 PF00665 Integrase core domain ALIDE2_RS20420 PF13333 Integrase core domain ALIDE2_RS20420 PF13276 HTH-like domain ALIDE2_RS20425 PF01527 Transposase ALIDE2_RS20435 PF01435 Peptidase family M48 ALIDE2_RS20445 PF01979 Amidohydrolase family ALIDE2_RS20455 PF04343 Protein of unknown function, DUF488 ALIDE2_RS20460 PF02627 Carboxymuconolactone decarboxylase family ALIDE2_RS20465 PF17760 UvrA interaction domain ALIDE2_RS20465 PF17755 UvrA DNA-binding domain ALIDE2_RS20465 PF00005 ABC transporter ALIDE2_RS20470 PF13458 Periplasmic binding protein ALIDE2_RS20475 PF13609 Gram-negative porin ALIDE2_RS20480 PF08946 Osmosensory transporter coiled coil ALIDE2_RS20480 PF00083 Sugar (and other) transporter ALIDE2_RS20490 PF00474 Sodium:solute symporter family ALIDE2_RS20505 PF01323 DSBA-like thioredoxin domain ALIDE2_RS20520 PF00682 HMGL-like ALIDE2_RS20525 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ALIDE2_RS20530 PF00364 Biotin-requiring enzyme ALIDE2_RS20530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS20530 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS20530 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS20540 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS20545 PF01039 Carboxyl transferase domain ALIDE2_RS20550 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS20550 PF00501 AMP-binding enzyme ALIDE2_RS20565 PF05199 GMC oxidoreductase ALIDE2_RS20565 PF00732 GMC oxidoreductase ALIDE2_RS20570 PF13458 Periplasmic binding protein ALIDE2_RS20575 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS20580 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS20580 PF00005 ABC transporter ALIDE2_RS20585 PF00005 ABC transporter ALIDE2_RS20590 PF05199 GMC oxidoreductase ALIDE2_RS20590 PF00732 GMC oxidoreductase ALIDE2_RS20595 PF00501 AMP-binding enzyme ALIDE2_RS20595 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS20600 PF00155 Aminotransferase class I and II ALIDE2_RS20605 PF00368 Hydroxymethylglutaryl-coenzyme A reductase ALIDE2_RS20610 PF13419 Haloacid dehalogenase-like hydrolase ALIDE2_RS20615 PF00563 EAL domain ALIDE2_RS20615 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS20615 PF00360 Phytochrome region ALIDE2_RS20615 PF01590 GAF domain ALIDE2_RS20620 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE2_RS20630 PF08448 PAS fold ALIDE2_RS20630 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS20630 PF00563 EAL domain ALIDE2_RS20655 PF03575 Peptidase family S51 ALIDE2_RS20670 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS20685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS20685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS20685 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS20695 PF00108 Thiolase, N-terminal domain ALIDE2_RS20695 PF02803 Thiolase, C-terminal domain ALIDE2_RS20700 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) ALIDE2_RS20705 PF00484 Carbonic anhydrase ALIDE2_RS20710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS20710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS20710 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS20715 PF13411 MerR HTH family regulatory protein ALIDE2_RS20745 PF00005 ABC transporter ALIDE2_RS20745 PF16326 ABC transporter C-terminal domain ALIDE2_RS20745 PF12848 ABC transporter ALIDE2_RS20750 PF00072 Response regulator receiver domain ALIDE2_RS20750 PF01339 CheB methylesterase ALIDE2_RS20755 PF03975 CheD chemotactic sensory transduction ALIDE2_RS20760 PF03705 CheR methyltransferase, all-alpha domain ALIDE2_RS20760 PF01739 CheR methyltransferase, SAM binding domain ALIDE2_RS20765 PF01584 CheW-like domain ALIDE2_RS20770 PF02895 Signal transducing histidine kinase, homodimeric domain ALIDE2_RS20770 PF09078 CheY binding ALIDE2_RS20770 PF01627 Hpt domain ALIDE2_RS20770 PF01584 CheW-like domain ALIDE2_RS20770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS20775 PF00072 Response regulator receiver domain ALIDE2_RS20785 PF05384 Sensor protein DegS ALIDE2_RS20785 PF07730 Histidine kinase ALIDE2_RS20785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS20790 PF00072 Response regulator receiver domain ALIDE2_RS20790 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS20795 PF01311 Bacterial export proteins, family 1 ALIDE2_RS20800 PF01313 Bacterial export proteins, family 3 ALIDE2_RS20805 PF00813 FliP family ALIDE2_RS20815 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ALIDE2_RS20815 PF16973 Flagellar motor switch protein FliN N-terminal ALIDE2_RS20820 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ALIDE2_RS20820 PF02154 Flagellar motor switch protein FliM ALIDE2_RS20840 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ALIDE2_RS20840 PF18269 T3SS EscN ATPase C-terminal domain ALIDE2_RS20850 PF14842 FliG N-terminal domain ALIDE2_RS20850 PF14841 FliG middle domain ALIDE2_RS20850 PF01706 FliG C-terminal domain ALIDE2_RS20855 PF01514 Secretory protein of YscJ/FliF family ALIDE2_RS20855 PF08345 Flagellar M-ring protein C-terminal ALIDE2_RS20860 PF02049 Flagellar hook-basal body complex protein FliE ALIDE2_RS20875 PF07195 Flagellar hook-associated protein 2 C-terminus ALIDE2_RS20875 PF07196 Flagellin hook IN motif ALIDE2_RS20875 PF02465 Flagellar hook-associated protein 2 N-terminus ALIDE2_RS20880 PF00700 Bacterial flagellin C-terminal helical region ALIDE2_RS20880 PF00669 Bacterial flagellin N-terminal helical region ALIDE2_RS20885 PF07196 Flagellin hook IN motif ALIDE2_RS20885 PF00700 Bacterial flagellin C-terminal helical region ALIDE2_RS20885 PF00669 Bacterial flagellin N-terminal helical region ALIDE2_RS20890 PF14307 Glycosyltransferase WbsX ALIDE2_RS20890 PF05045 Rhamnan synthesis protein F ALIDE2_RS20895 PF01618 MotA/TolQ/ExbB proton channel family ALIDE2_RS20900 PF00691 OmpA family ALIDE2_RS20900 PF13677 Membrane MotB of proton-channel complex MotA/MotB ALIDE2_RS20905 PF00072 Response regulator receiver domain ALIDE2_RS20910 PF04344 Chemotaxis phosphatase, CheZ ALIDE2_RS20915 PF01312 FlhB HrpN YscU SpaS Family ALIDE2_RS20920 PF00771 FHIPEP family ALIDE2_RS20925 PF00448 SRP54-type protein, GTPase domain ALIDE2_RS20935 PF04539 Sigma-70 region 3 ALIDE2_RS20935 PF04542 Sigma-70 region 2 ALIDE2_RS20935 PF04545 Sigma-70, region 4 ALIDE2_RS20950 PF13144 Chaperone for flagella basal body P-ring formation ALIDE2_RS20955 PF00460 Flagella basal body rod protein ALIDE2_RS20960 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE2_RS20960 PF00460 Flagella basal body rod protein ALIDE2_RS20965 PF03963 Flagellar hook capping protein - N-terminal region ALIDE2_RS20965 PF13861 FlgD Tudor-like domain ALIDE2_RS20965 PF13860 FlgD Ig-like domain ALIDE2_RS20970 PF07559 Flagellar basal body protein FlaE ALIDE2_RS20970 PF00460 Flagella basal body rod protein ALIDE2_RS20970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE2_RS20975 PF00460 Flagella basal body rod protein ALIDE2_RS20975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE2_RS20980 PF00460 Flagella basal body rod protein ALIDE2_RS20980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ALIDE2_RS20985 PF02107 Flagellar L-ring protein ALIDE2_RS20990 PF02119 Flagellar P-ring protein ALIDE2_RS20995 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ALIDE2_RS20995 PF10135 Rod binding protein ALIDE2_RS21005 PF00669 Bacterial flagellin N-terminal helical region ALIDE2_RS21015 PF03060 Nitronate monooxygenase ALIDE2_RS21020 PF00155 Aminotransferase class I and II ALIDE2_RS21020 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS21030 PF00892 EamA-like transporter family ALIDE2_RS21035 PF00155 Aminotransferase class I and II ALIDE2_RS21040 PF02567 Phenazine biosynthesis-like protein ALIDE2_RS21045 PF00291 Pyridoxal-phosphate dependent enzyme ALIDE2_RS21070 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS21070 PF00360 Phytochrome region ALIDE2_RS21070 PF00563 EAL domain ALIDE2_RS21070 PF01590 GAF domain ALIDE2_RS21090 PF02633 Creatinine amidohydrolase ALIDE2_RS21095 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS21105 PF00578 AhpC/TSA family ALIDE2_RS21120 PF01208 Uroporphyrinogen decarboxylase (URO-D) ALIDE2_RS21125 PF18074 Primosomal protein N C-terminal domain ALIDE2_RS21125 PF17764 3′ DNA-binding domain (3′BD) ALIDE2_RS21125 PF00271 Helicase conserved C-terminal domain ALIDE2_RS21125 PF00270 DEAD/DEAH box helicase ALIDE2_RS21125 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ALIDE2_RS21130 PF02803 Thiolase, C-terminal domain ALIDE2_RS21130 PF00108 Thiolase, N-terminal domain ALIDE2_RS21135 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS21140 PF00501 AMP-binding enzyme ALIDE2_RS21145 PF00005 ABC transporter ALIDE2_RS21165 PF00005 ABC transporter ALIDE2_RS21165 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS21175 PF03547 Membrane transport protein ALIDE2_RS21180 PF00580 UvrD/REP helicase N-terminal domain ALIDE2_RS21180 PF13361 UvrD-like helicase C-terminal domain ALIDE2_RS21190 PF02253 Phospholipase A1 ALIDE2_RS21195 PF03781 Sulfatase-modifying factor enzyme 1 ALIDE2_RS21200 PF00884 Sulfatase ALIDE2_RS21205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ALIDE2_RS21210 PF01494 FAD binding domain ALIDE2_RS21215 PF01557 Fumarylacetoacetate (FAA) hydrolase family ALIDE2_RS21220 PF13609 Gram-negative porin ALIDE2_RS21225 PF07729 FCD domain ALIDE2_RS21225 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS21235 PF00582 Universal stress protein family ALIDE2_RS21240 PF01702 Queuine tRNA-ribosyltransferase ALIDE2_RS21260 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS21265 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS21270 PF03737 Aldolase/RraA ALIDE2_RS21280 PF01553 Acyltransferase ALIDE2_RS21280 PF00501 AMP-binding enzyme ALIDE2_RS21285 PF17862 AAA+ lid domain ALIDE2_RS21285 PF06480 FtsH Extracellular ALIDE2_RS21285 PF00004 ATPase family associated with various cellular activities (AAA) ALIDE2_RS21285 PF01434 Peptidase family M41 ALIDE2_RS21290 PF00156 Phosphoribosyl transferase domain ALIDE2_RS21295 PF01738 Dienelactone hydrolase family ALIDE2_RS21295 PF00156 Phosphoribosyl transferase domain ALIDE2_RS21300 PF01738 Dienelactone hydrolase family ALIDE2_RS21300 PF00156 Phosphoribosyl transferase domain ALIDE2_RS21305 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS21310 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS21315 PF13454 FAD-NAD(P)-binding ALIDE2_RS21340 PF13350 Tyrosine phosphatase family ALIDE2_RS21345 PF13657 HipA N-terminal domain ALIDE2_RS21345 PF07804 HipA-like C-terminal domain ALIDE2_RS21365 PF01609 Transposase DDE domain ALIDE2_RS21365 PF13006 Insertion element 4 transposase N-terminal ALIDE2_RS21385 PF00665 Integrase core domain ALIDE2_RS21385 PF13276 HTH-like domain ALIDE2_RS21385 PF13333 Integrase core domain ALIDE2_RS21390 PF01527 Transposase ALIDE2_RS21395 PF00665 Integrase core domain ALIDE2_RS21400 PF01695 IstB-like ATP binding protein ALIDE2_RS21405 PF00034 Cytochrome c ALIDE2_RS21410 PF00890 FAD binding domain ALIDE2_RS21420 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ALIDE2_RS21420 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ALIDE2_RS21425 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS21425 PF01799 [2Fe-2S] binding domain ALIDE2_RS21430 PF03450 CO dehydrogenase flavoprotein C-terminal domain ALIDE2_RS21430 PF00941 FAD binding domain in molybdopterin dehydrogenase ALIDE2_RS21455 PF02625 XdhC and CoxI family ALIDE2_RS21455 PF13478 XdhC Rossmann domain ALIDE2_RS21460 PF12804 MobA-like NTP transferase domain ALIDE2_RS21480 PF01738 Dienelactone hydrolase family ALIDE2_RS21485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS21485 PF12806 Acetyl-CoA dehydrogenase C-terminal like ALIDE2_RS21485 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS21485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS21490 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS21490 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS21490 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ALIDE2_RS21495 PF00108 Thiolase, N-terminal domain ALIDE2_RS21495 PF02803 Thiolase, C-terminal domain ALIDE2_RS21505 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS21505 PF00501 AMP-binding enzyme ALIDE2_RS21510 PF00005 ABC transporter ALIDE2_RS21515 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS21520 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS21525 PF13407 Periplasmic binding protein domain ALIDE2_RS21540 PF00589 Phage integrase family ALIDE2_RS21540 PF13495 Phage integrase, N-terminal SAM-like domain ALIDE2_RS21550 PF00589 Phage integrase family ALIDE2_RS21555 PF02899 Phage integrase, N-terminal SAM-like domain ALIDE2_RS21555 PF00589 Phage integrase family ALIDE2_RS21560 PF04986 Putative transposase ALIDE2_RS21560 PF14319 Transposase zinc-binding domain ALIDE2_RS21570 PF01196 Ribosomal protein L17 ALIDE2_RS21575 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ALIDE2_RS21575 PF01000 RNA polymerase Rpb3/RpoA insert domain ALIDE2_RS21575 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ALIDE2_RS21580 PF01479 S4 domain ALIDE2_RS21580 PF00163 Ribosomal protein S4/S9 N-terminal domain ALIDE2_RS21585 PF00411 Ribosomal protein S11 ALIDE2_RS21590 PF00416 Ribosomal protein S13/S18 ALIDE2_RS21595 PF00444 Ribosomal protein L36 ALIDE2_RS21600 PF00344 SecY translocase ALIDE2_RS21605 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ALIDE2_RS21610 PF00327 Ribosomal protein L30p/L7e ALIDE2_RS21615 PF03719 Ribosomal protein S5, C-terminal domain ALIDE2_RS21615 PF00333 Ribosomal protein S5, N-terminal domain ALIDE2_RS21620 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ALIDE2_RS21625 PF00347 Ribosomal protein L6 ALIDE2_RS21630 PF00410 Ribosomal protein S8 ALIDE2_RS21635 PF00253 Ribosomal protein S14p/S29e ALIDE2_RS21640 PF00281 Ribosomal protein L5 ALIDE2_RS21640 PF00673 ribosomal L5P family C-terminus ALIDE2_RS21645 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ALIDE2_RS21650 PF00238 Ribosomal protein L14p/L23e ALIDE2_RS21655 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ALIDE2_RS21655 PF01266 FAD dependent oxidoreductase ALIDE2_RS21660 PF08220 DeoR-like helix-turn-helix domain ALIDE2_RS21660 PF00455 DeoR C terminal sensor domain ALIDE2_RS21665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ALIDE2_RS21665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ALIDE2_RS21670 PF14748 Pyrroline-5-carboxylate reductase dimerisation ALIDE2_RS21670 PF03807 NADP oxidoreductase coenzyme F420-dependent ALIDE2_RS21680 PF01040 UbiA prenyltransferase family ALIDE2_RS21685 PF00210 Ferritin-like domain ALIDE2_RS21690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS21690 PF03466 LysR substrate binding domain ALIDE2_RS21695 PF00271 Helicase conserved C-terminal domain ALIDE2_RS21695 PF17191 RecG wedge domain ALIDE2_RS21695 PF00270 DEAD/DEAH box helicase ALIDE2_RS21700 PF01966 HD domain ALIDE2_RS21700 PF11871 Domain of unknown function (DUF3391) ALIDE2_RS21705 PF02547 Queuosine biosynthesis protein ALIDE2_RS21720 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS21725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS21725 PF03466 LysR substrate binding domain ALIDE2_RS21730 PF03167 Uracil DNA glycosylase superfamily ALIDE2_RS21735 PF00218 Indole-3-glycerol phosphate synthase ALIDE2_RS21740 PF00591 Glycosyl transferase family, a/b domain ALIDE2_RS21740 PF02885 Glycosyl transferase family, helical bundle domain ALIDE2_RS21745 PF00117 Glutamine amidotransferase class-I ALIDE2_RS21750 PF13333 Integrase core domain ALIDE2_RS21750 PF00665 Integrase core domain ALIDE2_RS21750 PF13276 HTH-like domain ALIDE2_RS21755 PF01527 Transposase ALIDE2_RS21780 PF00425 chorismate binding enzyme ALIDE2_RS21780 PF04715 Anthranilate synthase component I, N terminal region ALIDE2_RS21785 PF02203 Tar ligand binding domain homologue ALIDE2_RS21785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS21785 PF00672 HAMP domain ALIDE2_RS21790 PF00563 EAL domain ALIDE2_RS21790 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS21790 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS21795 PF13419 Haloacid dehalogenase-like hydrolase ALIDE2_RS21805 PF00834 Ribulose-phosphate 3 epimerase family ALIDE2_RS21810 PF04379 ApaG domain ALIDE2_RS21825 PF04107 Glutamate-cysteine ligase family 2(GCS2) ALIDE2_RS21830 PF02769 AIR synthase related protein, C-terminal domain ALIDE2_RS21830 PF00586 AIR synthase related protein, N-terminal domain ALIDE2_RS21845 PF12019 Type II transport protein GspH ALIDE2_RS21865 PF05567 Neisseria PilC beta-propeller domain ALIDE2_RS21870 PF08361 MAATS-type transcriptional repressor, C-terminal region ALIDE2_RS21870 PF00440 Bacterial regulatory proteins, tetR family ALIDE2_RS21875 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ALIDE2_RS21875 PF00561 alpha/beta hydrolase fold ALIDE2_RS21885 PF02321 Outer membrane efflux protein ALIDE2_RS21890 PF13533 Biotin-lipoyl like ALIDE2_RS21895 PF00005 ABC transporter ALIDE2_RS21905 PF01515 Phosphate acetyl/butaryl transferase ALIDE2_RS21910 PF00871 Acetokinase family ALIDE2_RS21915 PF04608 Phosphatidylglycerophosphatase A ALIDE2_RS21920 PF02464 Competence-damaged protein ALIDE2_RS21925 PF00672 HAMP domain ALIDE2_RS21925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS21925 PF02203 Tar ligand binding domain homologue ALIDE2_RS21930 PF00563 EAL domain ALIDE2_RS21930 PF03707 Bacterial signalling protein N terminal repeat ALIDE2_RS21930 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS21935 PF00072 Response regulator receiver domain ALIDE2_RS21935 PF03861 ANTAR domain ALIDE2_RS21940 PF07536 HWE histidine kinase ALIDE2_RS21940 PF13426 PAS domain ALIDE2_RS21945 PF03695 Uncharacterised protein family (UPF0149) ALIDE2_RS21945 PF02810 SEC-C motif ALIDE2_RS21955 PF02926 THUMP domain ALIDE2_RS21955 PF01170 Putative RNA methylase family UPF0020 ALIDE2_RS21960 PF00672 HAMP domain ALIDE2_RS21960 PF02743 Cache domain ALIDE2_RS21960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS21970 PF00309 Sigma-54 factor, Activator interacting domain (AID) ALIDE2_RS21970 PF04552 Sigma-54, DNA binding domain ALIDE2_RS21970 PF04963 Sigma-54 factor, core binding domain ALIDE2_RS21975 PF00005 ABC transporter ALIDE2_RS21985 PF00085 Thioredoxin ALIDE2_RS21985 PF01323 DSBA-like thioredoxin domain ALIDE2_RS21995 PF00750 tRNA synthetases class I (R) ALIDE2_RS21995 PF05746 DALR anticodon binding domain ALIDE2_RS21995 PF03485 Arginyl tRNA synthetase N terminal domain ALIDE2_RS22010 PF00375 Sodium:dicarboxylate symporter family ALIDE2_RS22015 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS22015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS22020 PF00072 Response regulator receiver domain ALIDE2_RS22020 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS22025 PF03466 LysR substrate binding domain ALIDE2_RS22025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS22030 PF01274 Malate synthase ALIDE2_RS22035 PF01361 Tautomerase enzyme ALIDE2_RS22045 PF13230 Glutamine amidotransferases class-II ALIDE2_RS22075 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ALIDE2_RS22075 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ALIDE2_RS22080 PF03594 Benzoate membrane transport protein ALIDE2_RS22085 PF02705 K+ potassium transporter ALIDE2_RS22095 PF02386 Cation transport protein ALIDE2_RS22100 PF02080 TrkA-C domain ALIDE2_RS22100 PF02254 TrkA-N domain ALIDE2_RS22105 PF00171 Aldehyde dehydrogenase family ALIDE2_RS22130 PF06144 DNA polymerase III, delta subunit ALIDE2_RS22130 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ALIDE2_RS22140 PF08264 Anticodon-binding domain of tRNA ALIDE2_RS22140 PF09334 tRNA synthetases class I (M) ALIDE2_RS22140 PF00133 tRNA synthetases class I (I, L, M and V) ALIDE2_RS22140 PF13603 Leucyl-tRNA synthetase, Domain 2 ALIDE2_RS22145 PF00924 Mechanosensitive ion channel ALIDE2_RS22150 PF00171 Aldehyde dehydrogenase family ALIDE2_RS22155 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS22155 PF00593 TonB dependent receptor ALIDE2_RS22160 PF01590 GAF domain ALIDE2_RS22160 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS22160 PF00158 Sigma-54 interaction domain ALIDE2_RS22165 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ALIDE2_RS22170 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS22170 PF13426 PAS domain ALIDE2_RS22170 PF00563 EAL domain ALIDE2_RS22175 PF02472 Biopolymer transport protein ExbD/TolR ALIDE2_RS22180 PF01618 MotA/TolQ/ExbB proton channel family ALIDE2_RS22185 PF05173 Dihydrodipicolinate reductase, C-terminus ALIDE2_RS22185 PF01113 Dihydrodipicolinate reductase, N-terminus ALIDE2_RS22190 PF04355 SmpA / OmlA family ALIDE2_RS22195 PF01475 Ferric uptake regulator family ALIDE2_RS22200 PF07475 HPr Serine kinase C-terminal domain ALIDE2_RS22200 PF02603 HPr Serine kinase N terminus ALIDE2_RS22205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ALIDE2_RS22210 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ALIDE2_RS22215 PF01259 SAICAR synthetase ALIDE2_RS22220 PF00085 Thioredoxin ALIDE2_RS22225 PF00731 AIR carboxylase ALIDE2_RS22230 PF02222 ATP-grasp domain ALIDE2_RS22230 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ALIDE2_RS22235 PF01300 Telomere recombination ALIDE2_RS22235 PF03481 Putative GTP-binding controlling metal-binding ALIDE2_RS22245 PF03922 OmpW family ALIDE2_RS22255 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ALIDE2_RS22260 PF00814 Glycoprotease family ALIDE2_RS22275 PF01544 CorA-like Mg2+ transporter protein ALIDE2_RS22290 PF01048 Phosphorylase superfamily ALIDE2_RS22295 PF00501 AMP-binding enzyme ALIDE2_RS22295 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS22300 PF02233 NAD(P) transhydrogenase beta subunit ALIDE2_RS22305 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ALIDE2_RS22305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ALIDE2_RS22305 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ALIDE2_RS22315 PF01116 Fructose-bisphosphate aldolase class-II ALIDE2_RS22320 PF00224 Pyruvate kinase, barrel domain ALIDE2_RS22320 PF02887 Pyruvate kinase, alpha/beta domain ALIDE2_RS22325 PF05195 Aminopeptidase P, N-terminal domain ALIDE2_RS22325 PF00557 Metallopeptidase family M24 ALIDE2_RS22330 PF00378 Enoyl-CoA hydratase/isomerase ALIDE2_RS22335 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS22340 PF02515 CoA-transferase family III ALIDE2_RS22355 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS22360 PF03466 LysR substrate binding domain ALIDE2_RS22360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS22365 PF00483 Nucleotidyl transferase ALIDE2_RS22370 PF02779 Transketolase, pyrimidine binding domain ALIDE2_RS22370 PF02780 Transketolase, C-terminal domain ALIDE2_RS22370 PF00456 Transketolase, thiamine diphosphate binding domain ALIDE2_RS22375 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ALIDE2_RS22375 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ALIDE2_RS22385 PF07722 Peptidase C26 ALIDE2_RS22390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS22390 PF03466 LysR substrate binding domain ALIDE2_RS22395 PF04909 Amidohydrolase ALIDE2_RS22425 PF07715 TonB-dependent Receptor Plug Domain ALIDE2_RS22425 PF00593 TonB dependent receptor ALIDE2_RS22435 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS22450 PF03466 LysR substrate binding domain ALIDE2_RS22450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS22460 PF00106 short chain dehydrogenase ALIDE2_RS22470 PF03942 DTW domain ALIDE2_RS22490 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS22495 PF13607 Succinyl-CoA ligase like flavodoxin domain ALIDE2_RS22495 PF00583 Acetyltransferase (GNAT) family ALIDE2_RS22495 PF13380 CoA binding domain ALIDE2_RS22500 PF02798 Glutathione S-transferase, N-terminal domain ALIDE2_RS22515 PF01751 Toprim domain ALIDE2_RS22515 PF01131 DNA topoisomerase ALIDE2_RS22525 PF03099 Biotin/lipoate A/B protein ligase family ALIDE2_RS22525 PF02237 Biotin protein ligase C terminal domain ALIDE2_RS22525 PF08279 HTH domain ALIDE2_RS22535 PF00107 Zinc-binding dehydrogenase ALIDE2_RS22535 PF08240 Alcohol dehydrogenase GroES-like domain ALIDE2_RS22545 PF13452 N-terminal half of MaoC dehydratase ALIDE2_RS22555 PF16177 Acetyl-coenzyme A synthetase N-terminus ALIDE2_RS22555 PF00501 AMP-binding enzyme ALIDE2_RS22555 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS22560 PF12802 MarR family ALIDE2_RS22580 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS22585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS22585 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS22585 PF08521 Two-component sensor kinase N-terminal ALIDE2_RS22590 PF00072 Response regulator receiver domain ALIDE2_RS22590 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS22595 PF00266 Aminotransferase class-V ALIDE2_RS22600 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS22605 PF00005 ABC transporter ALIDE2_RS22620 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase ALIDE2_RS22625 PF00171 Aldehyde dehydrogenase family ALIDE2_RS22635 PF01266 FAD dependent oxidoreductase ALIDE2_RS22640 PF01168 Alanine racemase, N-terminal domain ALIDE2_RS22640 PF00842 Alanine racemase, C-terminal domain ALIDE2_RS22645 PF01266 FAD dependent oxidoreductase ALIDE2_RS22650 PF01037 Lrp/AsnC ligand binding domain ALIDE2_RS22660 PF00154 recA bacterial DNA recombination protein ALIDE2_RS22665 PF02631 RecX family ALIDE2_RS22675 PF02355 Protein export membrane protein ALIDE2_RS22675 PF07549 SecD/SecF GG Motif ALIDE2_RS22680 PF02355 Protein export membrane protein ALIDE2_RS22680 PF13721 SecD export protein N-terminal TM region ALIDE2_RS22680 PF07549 SecD/SecF GG Motif ALIDE2_RS22685 PF02699 Preprotein translocase subunit ALIDE2_RS22695 PF01037 Lrp/AsnC ligand binding domain ALIDE2_RS22700 PF05977 Transmembrane secretion effector ALIDE2_RS22705 PF03562 MltA specific insert domain ALIDE2_RS22705 PF06725 3D domain ALIDE2_RS22710 PF04972 BON domain ALIDE2_RS22710 PF00691 OmpA family ALIDE2_RS22715 PF00072 Response regulator receiver domain ALIDE2_RS22715 PF00196 Bacterial regulatory proteins, luxR family ALIDE2_RS22720 PF00989 PAS fold ALIDE2_RS22720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS22720 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS22725 PF00795 Carbon-nitrogen hydrolase ALIDE2_RS22735 PF08335 GlnD PII-uridylyltransferase ALIDE2_RS22735 PF03710 Glutamate-ammonia ligase adenylyltransferase ALIDE2_RS22740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ALIDE2_RS22745 PF00873 AcrB/AcrD/AcrF family ALIDE2_RS22750 PF00043 Glutathione S-transferase, C-terminal domain ALIDE2_RS22750 PF13417 Glutathione S-transferase, N-terminal domain ALIDE2_RS22755 PF08328 Adenylosuccinate lyase C-terminal ALIDE2_RS22755 PF00206 Lyase ALIDE2_RS22760 PF07152 YaeQ protein ALIDE2_RS22775 PF03741 Integral membrane protein TerC family ALIDE2_RS22785 PF03466 LysR substrate binding domain ALIDE2_RS22785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS22795 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ALIDE2_RS22800 PF01435 Peptidase family M48 ALIDE2_RS22800 PF13181 Tetratricopeptide repeat ALIDE2_RS22805 PF01967 MoaC family ALIDE2_RS22815 PF00753 Metallo-beta-lactamase superfamily ALIDE2_RS22815 PF12706 Beta-lactamase superfamily domain ALIDE2_RS22820 PF16697 Inner membrane component of T3SS, cytoplasmic domain ALIDE2_RS22830 PF03741 Integral membrane protein TerC family ALIDE2_RS22835 PF02629 CoA binding domain ALIDE2_RS22835 PF00549 CoA-ligase ALIDE2_RS22840 PF00549 CoA-ligase ALIDE2_RS22840 PF08442 ATP-grasp domain ALIDE2_RS22845 PF01118 Semialdehyde dehydrogenase, NAD binding domain ALIDE2_RS22850 PF17782 DprA winged helix domain ALIDE2_RS22850 PF02481 DNA recombination-mediator protein A ALIDE2_RS22860 PF01327 Polypeptide deformylase ALIDE2_RS22870 PF02911 Formyl transferase, C-terminal domain ALIDE2_RS22870 PF00551 Formyl transferase ALIDE2_RS22885 PF00162 Phosphoglycerate kinase ALIDE2_RS22900 PF00892 EamA-like transporter family ALIDE2_RS22905 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ALIDE2_RS22915 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS22925 PF02203 Tar ligand binding domain homologue ALIDE2_RS22925 PF00672 HAMP domain ALIDE2_RS22925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ALIDE2_RS22930 PF17755 UvrA DNA-binding domain ALIDE2_RS22930 PF17760 UvrA interaction domain ALIDE2_RS22935 PF07690 Major Facilitator Superfamily ALIDE2_RS22940 PF00436 Single-strand binding protein family ALIDE2_RS22945 PF02652 L-lactate permease ALIDE2_RS22955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS22955 PF03466 LysR substrate binding domain ALIDE2_RS22960 PF04303 PrpF protein ALIDE2_RS22965 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS22970 PF13609 Gram-negative porin ALIDE2_RS22975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS22975 PF03466 LysR substrate binding domain ALIDE2_RS22980 PF00890 FAD binding domain ALIDE2_RS22980 PF04205 FMN-binding domain ALIDE2_RS22990 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS22995 PF00072 Response regulator receiver domain ALIDE2_RS22995 PF00158 Sigma-54 interaction domain ALIDE2_RS22995 PF02954 Bacterial regulatory protein, Fis family ALIDE2_RS23000 PF01039 Carboxyl transferase domain ALIDE2_RS23005 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS23015 PF00289 Biotin carboxylase, N-terminal domain ALIDE2_RS23015 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ALIDE2_RS23015 PF02785 Biotin carboxylase C-terminal domain ALIDE2_RS23020 PF00364 Biotin-requiring enzyme ALIDE2_RS23055 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS23060 PF02515 CoA-transferase family III ALIDE2_RS23070 PF13193 AMP-binding enzyme C-terminal domain ALIDE2_RS23070 PF00501 AMP-binding enzyme ALIDE2_RS23075 PF00677 Lumazine binding domain ALIDE2_RS23080 PF01810 LysE type translocator ALIDE2_RS23085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ALIDE2_RS23090 PF00486 Transcriptional regulatory protein, C terminal ALIDE2_RS23090 PF00072 Response regulator receiver domain ALIDE2_RS23105 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS23105 PF00175 Oxidoreductase NAD-binding domain ALIDE2_RS23105 PF00970 Oxidoreductase FAD-binding domain ALIDE2_RS23110 PF01292 Prokaryotic cytochrome b561 ALIDE2_RS23125 PF00175 Oxidoreductase NAD-binding domain ALIDE2_RS23125 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS23125 PF00970 Oxidoreductase FAD-binding domain ALIDE2_RS23130 PF02424 ApbE family ALIDE2_RS23145 PF00689 Cation transporting ATPase, C-terminus ALIDE2_RS23145 PF00690 Cation transporter/ATPase, N-terminus ALIDE2_RS23155 PF03060 Nitronate monooxygenase ALIDE2_RS23160 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS23165 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS23165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS23165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS23170 PF09339 IclR helix-turn-helix domain ALIDE2_RS23170 PF01614 Bacterial transcriptional regulator ALIDE2_RS23175 PF02515 CoA-transferase family III ALIDE2_RS23185 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ALIDE2_RS23185 PF02770 Acyl-CoA dehydrogenase, middle domain ALIDE2_RS23185 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ALIDE2_RS23190 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS23195 PF09339 IclR helix-turn-helix domain ALIDE2_RS23200 PF02515 CoA-transferase family III ALIDE2_RS23205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS23205 PF03466 LysR substrate binding domain ALIDE2_RS23210 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS23260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS23260 PF03466 LysR substrate binding domain ALIDE2_RS23265 PF00202 Aminotransferase class-III ALIDE2_RS23270 PF00171 Aldehyde dehydrogenase family ALIDE2_RS23275 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS23275 PF05230 MASE2 domain ALIDE2_RS23280 PF07729 FCD domain ALIDE2_RS23280 PF00392 Bacterial regulatory proteins, gntR family ALIDE2_RS23290 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS23295 PF02653 Branched-chain amino acid transport system / permease component ALIDE2_RS23295 PF11862 Domain of unknown function (DUF3382) ALIDE2_RS23300 PF12399 Branched-chain amino acid ATP-binding cassette transporter ALIDE2_RS23300 PF00005 ABC transporter ALIDE2_RS23305 PF00005 ABC transporter ALIDE2_RS23310 PF01546 Peptidase family M20/M25/M40 ALIDE2_RS23310 PF07687 Peptidase dimerisation domain ALIDE2_RS23315 PF07171 MlrC C-terminus ALIDE2_RS23315 PF07364 Metallopeptidase family M81 ALIDE2_RS23320 PF00390 Malic enzyme, N-terminal domain ALIDE2_RS23320 PF01515 Phosphate acetyl/butaryl transferase ALIDE2_RS23320 PF03949 Malic enzyme, NAD binding domain ALIDE2_RS23325 PF00545 ribonuclease ALIDE2_RS23335 PF00398 Ribosomal RNA adenine dimethylase ALIDE2_RS23340 PF00639 PPIC-type PPIASE domain ALIDE2_RS23340 PF09312 SurA N-terminal domain ALIDE2_RS23345 PF04453 LPS transport system D ALIDE2_RS23350 PF01636 Phosphotransferase enzyme family ALIDE2_RS23355 PF04452 RNA methyltransferase ALIDE2_RS23370 PF06470 SMC proteins Flexible Hinge Domain ALIDE2_RS23370 PF02463 RecF/RecN/SMC N terminal domain ALIDE2_RS23380 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS23385 PF08241 Methyltransferase domain ALIDE2_RS23390 PF00561 alpha/beta hydrolase fold ALIDE2_RS23395 PF01169 Uncharacterized protein family UPF0016 ALIDE2_RS23400 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ALIDE2_RS23405 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) ALIDE2_RS23410 PF00106 short chain dehydrogenase ALIDE2_RS23425 PF01380 SIS domain ALIDE2_RS23425 PF00571 CBS domain ALIDE2_RS23430 PF00999 Sodium/hydrogen exchanger family ALIDE2_RS23430 PF02080 TrkA-C domain ALIDE2_RS23430 PF02254 TrkA-N domain ALIDE2_RS23435 PF00156 Phosphoribosyl transferase domain ALIDE2_RS23450 PF12631 MnmE helical domain ALIDE2_RS23450 PF01926 50S ribosome-binding GTPase ALIDE2_RS23450 PF10396 GTP-binding protein TrmE N-terminus ALIDE2_RS23455 PF00497 Bacterial extracellular solute-binding proteins, family 3 ALIDE2_RS23460 PF01266 FAD dependent oxidoreductase ALIDE2_RS23465 PF03466 LysR substrate binding domain ALIDE2_RS23465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ALIDE2_RS23480 PF03576 Peptidase family S58 ALIDE2_RS23485 PF12911 N-terminal TM domain of oligopeptide transport permease C ALIDE2_RS23485 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS23490 PF00528 Binding-protein-dependent transport system inner membrane component ALIDE2_RS23495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE2_RS23500 PF00005 ABC transporter ALIDE2_RS23500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ALIDE2_RS23505 PF01112 Asparaginase ALIDE2_RS23525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ALIDE2_RS23530 PF02096 60Kd inner membrane protein ALIDE2_RS23530 PF14849 YidC periplasmic domain ALIDE2_RS23535 PF01809 Putative membrane protein insertion efficiency factor ALIDE2_RS23540 PF00825 Ribonuclease P ALIDE2_RS23545 PF00468 Ribosomal protein L34 ALIDE2_RS23715 PF08447 PAS fold ALIDE2_RS23715 PF08448 PAS fold ALIDE2_RS23715 PF00563 EAL domain ALIDE2_RS23715 PF13426 PAS domain ALIDE2_RS23715 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS23715 PF05231 MASE1 ALIDE2_RS23730 PF00360 Phytochrome region ALIDE2_RS23730 PF00563 EAL domain ALIDE2_RS23730 PF00990 Diguanylate cyclase, GGDEF domain ALIDE2_RS23730 PF01590 GAF domain ALIDE2_RS23750 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS23855 PF00403 Heavy-metal-associated domain ALIDE2_RS23915 PF13932 GidA associated domain ALIDE2_RS23915 PF01134 Glucose inhibited division protein A ALIDE2_RS23930 PF01134 Glucose inhibited division protein A ALIDE2_RS23930 PF13932 GidA associated domain ALIDE2_RS23945 PF17762 HTH domain found in ParB protein ALIDE2_RS23945 PF02195 ParB-like nuclease domain ALIDE2_RS24050 PF18073 Rubredoxin metal binding domain ALIDE2_RS24100 PF03401 Tripartite tricarboxylate transporter family receptor ALIDE2_RS24105 PF02899 Phage integrase, N-terminal SAM-like domain ALIDE2_RS24105 PF00589 Phage integrase family ALIDE2_RS24110 PF02899 Phage integrase, N-terminal SAM-like domain ALIDE2_RS24110 PF00589 Phage integrase family ALIDE2_RS24115 PF02515 CoA-transferase family III ALIDE2_RS24120 PF02515 CoA-transferase family III ALIDE2_RS24130 PF00111 2Fe-2S iron-sulfur cluster binding domain ALIDE2_RS24130 PF00970 Oxidoreductase FAD-binding domain ALIDE2_RS24130 PF00175 Oxidoreductase NAD-binding domain ALIDE2_RS24135 PF13426 PAS domain ALIDE2_RS24135 PF00072 Response regulator receiver domain ALIDE2_RS24135 PF00512 His Kinase A (phospho-acceptor) domain ALIDE2_RS24135 PF08448 PAS fold ALIDE2_RS24135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase